View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7017_low_59 (Length: 260)
Name: NF7017_low_59
Description: NF7017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7017_low_59 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 44884665 - 44884491
Alignment:
| Q |
20 |
cactgccttcctctcctcgtcatcattatcataatgacacatctgatctcctcctcatccctcacgtgcctggctccaaactccgcctcatgtgcagcta |
119 |
Q |
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| T |
44884665 |
cactgccttcctctcctcgtcatcattatcataatgacacatctgatctcctcctcatccctcacgtgcctggctccaaactccgcctcatgtgcagcta |
44884566 |
T |
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| Q |
120 |
cggtggccacatcatgccacgtgacaactccctctactacgttggtggcgacactcgtatcgtcgccgttgaccg |
194 |
Q |
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||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
44884565 |
cggcggccacatcatgccacgtgacaactccctctactacgtcggtggcgacactcgtatcgtcgccgttgaccg |
44884491 |
T |
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