View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7017_low_77 (Length: 225)
Name: NF7017_low_77
Description: NF7017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7017_low_77 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 36717036 - 36716830
Alignment:
| Q |
1 |
gatggatcagagaaaatggtcagctggttagcatgaactggtgttccagtttgctcaatttcctcagttccctgtctctccctccttctctcaatcgcct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36717036 |
gatggatcagagaaaatggtcagctggttagcatgaactggtgttccagtttgctcaatttcctcagttccctgtctctccctccttctctcaatcgcct |
36716937 |
T |
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| Q |
101 |
aaacacaatattaacaacactaatttagttcatattcaaattaataagatggaactaaacatacagaaaattcatcagaacattgacaacgatgacttaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
36716936 |
aaacacaatattaacaacactaatttagttcatattcaaattaataagatggaactaaacatacagaaaattcatcagaactttgacaacgatgacttaa |
36716837 |
T |
|
| Q |
201 |
tttatat |
207 |
Q |
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||||||| |
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| T |
36716836 |
tttatat |
36716830 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 1482248 - 1482090
Alignment:
| Q |
1 |
gatggatcagagaaaatggtcagctggttagcatgaactggtgttccagtttgctcaatttcctcagttccctgtctctccctccttctctcaatcgcct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
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| T |
1482248 |
gatggatcagagaaaatggtcagctggttagcatgaactggtgttccagtttgctcaatctcctcagttcccagtctctccctccttctctcaatcgcct |
1482149 |
T |
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| Q |
101 |
aaacacaatattaacaacactaatttagttcatattcaaattaataagatggaactaaa |
159 |
Q |
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||||||||||||||||||||||| ||| |||| ||||||| |||| |||| |||||||| |
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| T |
1482148 |
aaacacaatattaacaacactaaattaattcaaattcaaactaatcagatagaactaaa |
1482090 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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