View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7019_low_15 (Length: 362)
Name: NF7019_low_15
Description: NF7019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7019_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 15 - 346
Target Start/End: Original strand, 41736246 - 41736576
Alignment:
| Q |
15 |
ctgtgtatcggtagtgaaaattagtatgnnnnnnnnggttcagatagtatgcgactccaagcataaaggtgagtagcgtgcatataaaatatgtggcaga |
114 |
Q |
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| T |
41736246 |
ctgtgtatcggtagtgaaaattagtatgttttttt-ggttcaaatagtatgcgactccaagcataaaggtgagtagcgtgcgtataaaatatgtggcaga |
41736344 |
T |
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| Q |
115 |
ttatgagtgaaaggcatttttgaatgtttctgattgagaggtaaatgaatgaaacattgaaactgtttgtatacacatacagatttagtttttgaatgtg |
214 |
Q |
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| T |
41736345 |
ttatgagtgaaaggcatttttgaatgtttctgattgagaggtaaatgaatgaaacattgaaactgtttgtatacacatacagatttagtttttgaatgtg |
41736444 |
T |
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| Q |
215 |
ccactcatagcacatatcctttttgatatgcatgagtagagaggctgttcctagaatcacatttaagccaaagactaagccctcccttttcaaaggtaat |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41736445 |
ccactcatagcacatatcctttttgatatgcatgagtagagaggctgttcctagaatcacatttaagccaaagactaagccctcccttttcaaaggtaat |
41736544 |
T |
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| Q |
315 |
ttctatggcatggatagctcccgtaatcttag |
346 |
Q |
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|||||| |||||||||||||||||||||||| |
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| T |
41736545 |
ttctattccatggatagctcccgtaatcttag |
41736576 |
T |
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