View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7019_low_8 (Length: 446)

Name: NF7019_low_8
Description: NF7019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7019_low_8
NF7019_low_8
[»] chr8 (12 HSPs)
chr8 (16-409)||(20649849-20650242)
chr8 (16-408)||(21194047-21194439)
chr8 (16-406)||(22437184-22437574)
chr8 (16-409)||(21847831-21848224)
chr8 (10-385)||(23903050-23903424)
chr8 (16-409)||(16414985-16415373)
chr8 (16-112)||(24931619-24931711)
chr8 (27-108)||(23154838-23154919)
chr8 (217-268)||(16268859-16268910)
chr8 (226-268)||(28984015-28984057)
chr8 (226-268)||(28989234-28989276)
chr8 (226-268)||(31414167-31414209)
[»] chr3 (18 HSPs)
chr3 (16-409)||(6150143-6150536)
chr3 (16-405)||(17201092-17201482)
chr3 (16-409)||(8271689-8272082)
chr3 (16-407)||(30149814-30150205)
chr3 (16-409)||(13964645-13965035)
chr3 (33-409)||(22150036-22150403)
chr3 (166-409)||(15943885-15944128)
chr3 (16-156)||(15948014-15948154)
chr3 (16-115)||(15612559-15612658)
chr3 (16-112)||(30140263-30140359)
chr3 (16-84)||(12796024-12796092)
chr3 (16-84)||(16258930-16258998)
chr3 (16-84)||(18915514-18915582)
chr3 (217-268)||(10408626-10408677)
chr3 (217-268)||(12509903-12509954)
chr3 (217-268)||(28756977-28757028)
chr3 (217-268)||(47126602-47126653)
chr3 (226-268)||(31692605-31692647)
[»] chr2 (10 HSPs)
chr2 (18-417)||(22739237-22739636)
chr2 (16-409)||(22280564-22280957)
chr2 (10-272)||(25131062-25131324)
chr2 (16-243)||(24567425-24567652)
chr2 (20-112)||(25878531-25878623)
chr2 (10-84)||(12638818-12638892)
chr2 (16-84)||(12644485-12644553)
chr2 (16-84)||(24829105-24829172)
chr2 (16-83)||(34821609-34821675)
chr2 (228-268)||(23113394-23113434)
[»] chr6 (15 HSPs)
chr6 (16-408)||(16100707-16101099)
chr6 (16-407)||(16379571-16379962)
chr6 (16-409)||(16647165-16647558)
chr6 (16-272)||(18401337-18401593)
chr6 (233-409)||(14149316-14149492)
chr6 (16-180)||(1646239-1646403)
chr6 (16-115)||(18578113-18578212)
chr6 (52-236)||(14133824-14133993)
chr6 (10-115)||(23025251-23025356)
chr6 (16-115)||(16235051-16235149)
chr6 (20-112)||(19985697-19985789)
chr6 (10-84)||(18836178-18836252)
chr6 (320-417)||(21412714-21412811)
chr6 (228-267)||(18182705-18182744)
chr6 (226-292)||(21474502-21474568)
[»] chr4 (9 HSPs)
chr4 (14-409)||(14999472-14999867)
chr4 (16-409)||(15290209-15290602)
chr4 (18-416)||(12339909-12340309)
chr4 (16-115)||(9292994-9293093)
chr4 (16-115)||(15139015-15139113)
chr4 (217-268)||(3261986-3262037)
chr4 (217-268)||(7357296-7357347)
chr4 (217-268)||(11204424-11204475)
chr4 (217-268)||(29450729-29450780)
[»] scaffold0225 (1 HSPs)
scaffold0225 (16-409)||(26253-26646)
[»] scaffold0021 (6 HSPs)
scaffold0021 (16-409)||(90359-90752)
scaffold0021 (16-409)||(8014-8407)
scaffold0021 (81-409)||(20930-21257)
scaffold0021 (81-409)||(30506-30833)
scaffold0021 (10-62)||(21255-21307)
scaffold0021 (10-62)||(30831-30883)
[»] scaffold0141 (1 HSPs)
scaffold0141 (16-409)||(23820-24213)
[»] scaffold0008 (2 HSPs)
scaffold0008 (16-409)||(131543-131936)
scaffold0008 (16-409)||(26634-27026)
[»] chr1 (14 HSPs)
chr1 (16-409)||(20527896-20528289)
chr1 (16-405)||(20927897-20928286)
chr1 (16-407)||(20828517-20828908)
chr1 (10-269)||(22133015-22133274)
chr1 (10-373)||(41215019-41215378)
chr1 (263-416)||(22129555-22129708)
chr1 (9-310)||(20171998-20172300)
chr1 (217-268)||(20074973-20075024)
chr1 (217-268)||(20297456-20297507)
chr1 (217-268)||(31537261-31537312)
chr1 (217-268)||(38910090-38910141)
chr1 (217-268)||(48425948-48425999)
chr1 (217-268)||(52988816-52988867)
chr1 (228-264)||(16379149-16379185)
[»] chr7 (19 HSPs)
chr7 (10-408)||(4442738-4443136)
chr7 (16-407)||(7826717-7827108)
chr7 (16-407)||(27104836-27105227)
chr7 (16-407)||(27173098-27173489)
chr7 (10-400)||(13458846-13459234)
chr7 (142-337)||(14207264-14207456)
chr7 (142-337)||(14215954-14216146)
chr7 (16-115)||(11284627-11284726)
chr7 (152-367)||(22034950-22035165)
chr7 (189-367)||(17142404-17142582)
chr7 (16-81)||(17926436-17926501)
chr7 (72-285)||(17131545-17131758)
chr7 (217-268)||(21755431-21755482)
chr7 (217-268)||(26115769-26115820)
chr7 (217-268)||(13965847-13965898)
chr7 (217-268)||(26091977-26092028)
chr7 (217-268)||(40924996-40925047)
chr7 (217-268)||(49155320-49155371)
chr7 (343-416)||(14218206-14218279)
[»] scaffold0561 (1 HSPs)
scaffold0561 (10-406)||(6061-6458)
[»] scaffold0218 (1 HSPs)
scaffold0218 (16-409)||(1006-1399)
[»] scaffold0467 (2 HSPs)
scaffold0467 (16-406)||(678-1068)
scaffold0467 (174-406)||(13388-13620)
[»] scaffold0120 (1 HSPs)
scaffold0120 (16-409)||(25035-25429)
[»] scaffold0011 (4 HSPs)
scaffold0011 (16-409)||(73651-74044)
scaffold0011 (16-409)||(78032-78425)
scaffold0011 (103-409)||(181934-182240)
scaffold0011 (18-275)||(175701-175958)
[»] scaffold0170 (1 HSPs)
scaffold0170 (16-406)||(34942-35332)
[»] chr5 (8 HSPs)
chr5 (16-409)||(23508426-23508810)
chr5 (16-409)||(24583952-24584336)
chr5 (16-187)||(21934643-21934814)
chr5 (16-84)||(23505316-23505383)
chr5 (217-268)||(14884365-14884416)
chr5 (217-268)||(20345225-20345276)
chr5 (217-268)||(22505622-22505673)
chr5 (217-293)||(25851015-25851091)
[»] scaffold0124 (1 HSPs)
scaffold0124 (16-409)||(4859-5253)
[»] scaffold0465 (1 HSPs)
scaffold0465 (16-409)||(12679-13072)
[»] scaffold0302 (1 HSPs)
scaffold0302 (16-409)||(1068-1461)
[»] scaffold0266 (1 HSPs)
scaffold0266 (16-409)||(6914-7308)
[»] scaffold0962 (1 HSPs)
scaffold0962 (10-373)||(2425-2785)
[»] scaffold0673 (1 HSPs)
scaffold0673 (16-387)||(5380-5751)
[»] scaffold0610 (1 HSPs)
scaffold0610 (16-408)||(3958-4349)
[»] scaffold0162 (2 HSPs)
scaffold0162 (16-406)||(15767-16157)
scaffold0162 (16-84)||(10553-10621)
[»] scaffold0138 (1 HSPs)
scaffold0138 (152-408)||(25755-26012)
[»] scaffold0112 (1 HSPs)
scaffold0112 (10-382)||(3350-3722)
[»] scaffold0462 (2 HSPs)
scaffold0462 (165-409)||(2703-2953)
scaffold0462 (16-129)||(2579-2692)
[»] scaffold0233 (1 HSPs)
scaffold0233 (21-382)||(20807-21168)
[»] scaffold0058 (1 HSPs)
scaffold0058 (68-382)||(77339-77653)
[»] scaffold0269 (1 HSPs)
scaffold0269 (16-115)||(2335-2434)
[»] scaffold0244 (1 HSPs)
scaffold0244 (16-115)||(24913-25012)
[»] scaffold0615 (1 HSPs)
scaffold0615 (252-406)||(9429-9583)
[»] scaffold0009 (1 HSPs)
scaffold0009 (270-408)||(96637-96775)
[»] scaffold0342 (1 HSPs)
scaffold0342 (10-112)||(3334-3436)
[»] scaffold1164 (1 HSPs)
scaffold1164 (58-150)||(2292-2384)
[»] scaffold0028 (1 HSPs)
scaffold0028 (16-112)||(93791-93887)
[»] scaffold1486 (1 HSPs)
scaffold1486 (16-107)||(364-455)
[»] scaffold0139 (1 HSPs)
scaffold0139 (16-115)||(17696-17794)
[»] scaffold0023 (1 HSPs)
scaffold0023 (16-107)||(53967-54058)
[»] scaffold0102 (1 HSPs)
scaffold0102 (16-115)||(46431-46529)
[»] scaffold0092 (1 HSPs)
scaffold0092 (16-84)||(929-997)
[»] scaffold0409 (2 HSPs)
scaffold0409 (10-84)||(3331-3405)
scaffold0409 (10-84)||(11586-11660)
[»] scaffold0022 (1 HSPs)
scaffold0022 (16-90)||(8199-8273)
[»] scaffold0335 (1 HSPs)
scaffold0335 (16-84)||(10757-10826)
[»] scaffold1424 (1 HSPs)
scaffold1424 (16-84)||(131-198)
[»] scaffold0066 (1 HSPs)
scaffold0066 (16-84)||(51698-51766)
[»] scaffold1488 (1 HSPs)
scaffold1488 (16-66)||(202-252)
[»] scaffold0293 (1 HSPs)
scaffold0293 (228-267)||(15479-15518)
[»] scaffold0088 (1 HSPs)
scaffold0088 (217-268)||(29992-30043)
[»] scaffold0068 (1 HSPs)
scaffold0068 (217-268)||(67303-67354)
[»] scaffold0041 (1 HSPs)
scaffold0041 (217-268)||(41793-41844)
[»] scaffold0010 (1 HSPs)
scaffold0010 (217-268)||(39528-39579)
[»] scaffold0001 (1 HSPs)
scaffold0001 (217-268)||(514548-514599)
[»] scaffold0585 (1 HSPs)
scaffold0585 (226-268)||(4284-4326)
[»] scaffold0077 (1 HSPs)
scaffold0077 (250-283)||(29941-29974)


Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 20650242 - 20649849
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||     
T  20650242 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttatcacacat 20650143  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| || |  |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  20650142 aaaagaagtagtcaccgaaccgctggtcggggtgtcaataaccatcccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 20650043  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  20650042 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 20649943  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  20649942 ccgcattcaaagcaaacacctttcccgccgccttcttcggcctggtacacttagtactaatatgacccttctccccacaattgtagcaagtaat 20649849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 16 - 408
Target Start/End: Complemental strand, 21194439 - 21194047
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  21194439 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 21194340  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| ||||||| ||| |||||  | |||||||| ||||||||||||||||||||| ||| |||| |||||||||||    
T  21194339 aaaagaagtagtcaccgaacctctagccggggtgtcgataaccatcccccgcaacaaaggagttacaaccaatttcaaacgcttaacacaactaaccgag 21194240  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||||||||||||||| |||||||| |||| |||||||| |||||||||||||||||||||||||  ||||||||||| ||||    
T  21194239 ataaaagaatgagtagcaccaatatcaataattccaatcaaatgagtgctattgatgaaacacatacctcggataagattatccggctgctccacctcct 21194140  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 408  Q
    | |||||||| |||||||||||||| ||||||||||||||||||||||||||  |||| ||||| || |||| |||||||||||| |||||||    
T  21194139 ccgcattcaatgcaaacacctttcccgccgccttcttcggcttggtacacttggtactgatatggcccttctctccacaattgtaacaagtaa 21194047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 16 - 406
Target Start/End: Original strand, 22437184 - 22437574
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||| |||||||||||||||||  ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22437184 aatccatacaaaaaatcacatccatatgattcaatggaagacacacaagatctaactcaaaatcaacattaccaaaattaacatgacacttagcacacac 22437283  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
     ||| |||||||||| ||||||||||  ||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  22437284 taaagaagtagtcactgaaccactagtcggggtgtcgatgaccatccctcgcaacaacggagttacaaccaatttcaaacgctcaacacaactaaccgag 22437383  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||| || || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22437384 ataaaagaatgagtaacatcagtatcaataatcgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacttcct 22437483  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 406  Q
    |  ||||||| |||||||||||| |  |||||||||||||||||||||||||| |||| |||||||| ||||  ||||||||||| |||||    
T  22437484 ccacattcaatgcaaacaccttttccaccgccttcttcggcttggtacacttagtactgatatgacccttctcaccacaattgtaacaagt 22437574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 21848224 - 21847831
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||     
T  21848224 aatccataccaaaaataacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaacaaaattaacaggacacttagcacacat 21848125  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||  |||||||||||||||||||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  21848124 aaacgaagtagtcaccgaaccactagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 21848025  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  21848024 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaagagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 21847925  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | || |||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  21847924 ccgcgttcaaagcaaacacctttcccgccgccttcttcggcatggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 21847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 10 - 385
Target Start/End: Original strand, 23903050 - 23903424
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  23903050 acatccaatccatacaaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacatttccaaaattaacaggacacttagc 23903149  T
Q  110 acacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaacta 209  Q
    |||||| ||  |||||||||||||||||||||| ||||||| |||||||||  ||||| | ||||||||||||||||| ||||||||||||||| |||||    
T  23903150 acacactaaggaagtagtcaccgaaccactagccggggtgtcgatgaccatccctcgcgataacggagttacaaccaaattcaaatgctcaacacaacta 23903249  T
Q  210 accgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctcca 309  Q
     ||||| |||||||| ||||||||||| |||||||||||  |||| |||||||||||||||||||||| |||||||  ||||||||||  ||||||||||    
T  23903250 gccgagataaaagaatgagtagcaccagtatcaataattataatc-aaggagtactattgataaaacatatacctcatataagattatccggctgctcca 23903348  T
Q  310 cttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccatt 385  Q
    | || ||||||||||| |||||||||||| | ||| ||||||| |||||||||||||||  ||| |||||||||||    
T  23903349 cctcttctgcattcaatgcaaacaccttttctgccaccttctttggcttggtacacttagcactgatatgaccatt 23903424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 16414985 - 16415373
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||      |  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16414985 aatccataccaaaaatcacatccatatgcttcaaa-----aatcacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 16415079  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||| | || |||||||||| | |||||| |||||||||||    
T  16415080 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagtcaaaatcaatttcaaacgttcaacacaactaaccgag 16415179  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||  || |||||||| ||||    
T  16415180 ataaaagaatgagtagcaccagtatcaataattgcaatcaatggaatactattgataaaacacatacctcggataaggttatccggttgctccacctcct 16415279  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | |||||||| ||||||||||||||  || ||||||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  16415280 ccgcattcaaggcaaacacctttcccaccaccttcttcggcttggtacacttagtactaatatgacctttctctccataattgtagcaagtaat 16415373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 24931711 - 24931619
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 112  Q
    ||||||||||||||||||||||||||| ||||||||||| |||    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24931711 aatccataccaaaaatcacatccatatgcttcaacggaaaaca----agatccaactcaaaatcaacattaccaaaattaacaggacacttagcaca 24931619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 23154919 - 23154838
Alignment:
Q  27 aaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttag 108  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||  ||||||| |||||||||    
T  23154919 aaaatcacatccatatgcttcaacggaagatacacaagatcaaactcaaaatcaacattaccataattaacatgacacttag 23154838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 16268910 - 16268859
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  16268910 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 16268859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 28984015 - 28984057
Alignment:
Q  226 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||    
T  28984015 gagtagcaccagtatcaataatagcaattaaaggagtactatt 28984057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 28989234 - 28989276
Alignment:
Q  226 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||    
T  28989234 gagtagcaccagtatcaataatagcaattaaaggagtactatt 28989276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 31414209 - 31414167
Alignment:
Q  226 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  31414209 gagtagcaccaatatctataatagcaattaaaggagtactatt 31414167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 6150536 - 6150143
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  6150536 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 6150437  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| ||||||| |||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| ||||||||||     
T  6150436 aaaagaagtagtaaccgaacctctagccggggtgtcaataaccattccccgcaacaagggagttacaaccaatttcaaacgctcaacacaactaaccgat 6150337  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||| ||||    
T  6150336 ataaaagaatgagtagcaccaatatcaataattgcaatcaaatgagtactattgataaaacacatacctcggataagattatccggttgctccacctcct 6150237  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  6150236 ccgcattcaaagcaaacacctttcccaccgccttcttcggcttggtacacttagtactaatatgacccttctctccacaattgtagcaagtaat 6150143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 405
Target Start/End: Original strand, 17201092 - 17201482
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  17201092 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattacctaaattaacaggacaattagcacacac 17201191  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| |||||  |||||| |||||||||  |||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  17201192 aaaagaagtagtcaccgaaccgctagcacgggtgtcgatgaccatccctcgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 17201291  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat-aaaacacatacctcggataagattatttggctgctccacttcc 314  Q
     |||||||| ||||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| ||| ||||||| ||||    
T  17201292 ataaaagaatgagtagcactagtatcaataattgcaatcaatggagtactattgataaaaacacatacatcagataagattatctggatgctccatttcc 17201391  T
Q  315 tctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaag 405  Q
    || |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||| ||||    
T  17201392 tccgcattcaatgcaaacacctttcccgccgccttcttcggcttggtacacttagtactgatatgacccttctctccacaattgtaacaag 17201482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 8272082 - 8271689
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||     
T  8272082 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacatttagcacacat 8271983  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  8271982 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 8271883  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  8271882 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 8271783  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  8271782 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 8271689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 16 - 407
Target Start/End: Original strand, 30149814 - 30150205
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  30149814 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 30149913  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  30149914 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 30150013  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  30150014 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 30150113  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 407  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  30150114 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 30150205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 13965035 - 13964645
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  13965035 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 13964936  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    ||||   |||||||||||||| ||||| ||||| |  || |||||  | ||||||||  ||||||||||||| | ||||   |||||| ||||| |||||    
T  13964935 aaaa---gtagtcaccgaaccgctagccggggtatcaataaccattccacgcaacaaacgagttacaaccaaatccaaactttcaacacaactagccgag 13964839  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||    
T  13964838 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccgcctcct 13964739  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  13964738 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 13964645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 33 - 409
Target Start/End: Complemental strand, 22150403 - 22150036
Alignment:
Q  33 acatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccg 132  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||| ||||| ||||| ||||||| ||||||||||||||| |||| ||||||||||||    
T  22150403 acatccatatgcttcaacggaagacaaacaagacccaactcaaaattaacataaccaaaattaacaagacacttagcacacataaaagaagtagtcaccg 22150304  T
Q  133 aaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagc 232  Q
    |||| ||||| ||||| |  || ||| |  | |||||||| ||||||||||||||||||||| |||||||| | |||||| || |||||||| || ||||    
T  22150303 aaccgctagccggggtatcaataaccgttccccgcaacaaaggagttacaaccaatttcaaacgctcaacacagctaaccaagataaaagaatgactagc 22150204  T
Q  233 accaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaac 332  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||| |||||||||||||||    
T  22150203 accagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcagataagattatctggttgctccacctcctcagcattcaaagcaaac 22150104  T
Q  333 acctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    || ||||| |||||||||||||||||||         ||||||| ||||| |||| |||||||||||||||||||||    
T  22150103 acttttcccgccgccttcttcggcttgg---------tactaatgtgacccttctctccacaattgtagcaagtaat 22150036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 166 - 409
Target Start/End: Complemental strand, 15944128 - 15943885
Alignment:
Q  166 gcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtact 265  Q
    ||||||| | |||||||||||| |||||| | |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15944128 gcaacaaagaagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccaatatcaataattgcaatcaaaggagtact 15944029  T
Q  266 attgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacac 365  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  15944028 attgataaaacacatacctcgtataagattatccggctgctccacctcctccgcatttaaagcaaacacctttcccgccgccttcttcggcttggtacac 15943929  T
Q  366 ttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    ||| ||||||||||||| |||| ||| |||||||| ||||||||    
T  15943928 ttagtactaatatgacccttctctccgcaattgtaacaagtaat 15943885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 15948154 - 15948014
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  15948154 aatccataccaaaaatcacatccatatgcttaaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 15948055  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatga 156  Q
    |||| |||||||||||||||| ||||| |||||||||||||    
T  15948054 aaaagaagtagtcaccgaaccgctagccggggtgttgatga 15948014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 15612559 - 15612658
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15612559 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 15612658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 30140263 - 30140359
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 112  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||    
T  30140263 aatccataccaaaaataacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacagaacacttaacaca 30140359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 12796024 - 12796092
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  12796024 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacat 12796092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 16258930 - 16258998
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16258930 aatccataccaaaaataacatccatattcttcaacggaagacacacaagatccaactcaaaatcaacat 16258998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 18915514 - 18915582
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||    
T  18915514 aatccataccaaaaatcacatccatatgcttcaacggaagccaaacaagatccaactcaaagtcaacat 18915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 10408626 - 10408677
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  10408626 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 10408677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 12509954 - 12509903
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  12509954 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 12509903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 28756977 - 28757028
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  28756977 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 28757028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 47126602 - 47126653
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  47126602 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 47126653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 31692647 - 31692605
Alignment:
Q  226 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  31692647 gagtagcaccaatatctataatagcaattaaaggagtactatt 31692605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 18 - 417
Target Start/End: Complemental strand, 22739636 - 22739237
Alignment:
Q  18 tccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaa 117  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||    
T  22739636 tccatgccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattacaaaaattaacaggacacttagcacacataa 22739537  T
Q  118 aacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggt 217  Q
    || ||||||| |||||||| ||||| | ||||| ||| |||||  | |||||||| ||||||||||||||||||||| || ||||| ||||||||||| |    
T  22739536 aagaagtagttaccgaaccgctagccgaggtgtcgataaccatcccccgcaacaaaggagttacaaccaatttcaaacgcacaacacaactaaccgagat 22739437  T
Q  218 aaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctct 317  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||  |||||||||||||||||     
T  22739436 aaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataaatttatccggctgctccacttcctcc 22739337  T
Q  318 gcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaatattcttcg 417  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||| || |||||    
T  22739336 gcattcaaagcaaacacctttcctgccgccttcttcggcttggtacacttagtactaatatgacccttctctccacaattgtagcaagtaacatccttcg 22739237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 22280564 - 22280957
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||     
T  22280564 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattacctaaattaacaggacacttagcacacat 22280663  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  22280664 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgag 22280763  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||| ||||    
T  22280764 ataaatgaatgactagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataagattatcctgctgctccacctcct 22280863  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||  |||| |||||||||||| ||||||||    
T  22280864 ccgcattcaaagcaaacacctttcccgccgccttcttcggctttgtacacttagtactaatatgacatttctctccacaattgtaacaagtaat 22280957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 10 - 272
Target Start/End: Original strand, 25131062 - 25131324
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  25131062 acatccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaatattaccaaaattaacagggcacttagc 25131161  T
Q  110 acacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaacta 209  Q
    |||||| ||  |||||||||||||||||||||| ||||||| |||||||||  ||||| ||||||||||||||||||| |||| | | | |||| |||||    
T  25131162 acacactaaggaagtagtcaccgaaccactagccggggtgtcgatgaccatccctcgcgacaacggagttacaaccaaattcagacgttaaacacaacta 25131261  T
Q  210 accgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgata 272  Q
    |||||| || ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  25131262 accgagatagaagaatgagtagcaccagtatcaataattgcaatcaaatgagtactattgata 25131324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 16 - 243
Target Start/End: Complemental strand, 24567652 - 24567425
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||     
T  24567652 aatccataccaaaaatcacatccatatgcttccatggaagacacacaagatccaactcaaaatcaacagtaccaaaatcaacaggacacttagcacacat 24567553  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||| |||| |||||| ||||  |||||||  || | |||  |  ||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  24567552 aaaagaagttgtcatcgaaccgctagtcggggtgtcaataatcattccctgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 24567453  T
Q  216 gtaaaagaaagagtagcaccaatatcaa 243  Q
     |||||||| ||||||||| | ||||||    
T  24567452 ataaaagaatgagtagcactagtatcaa 24567425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 25878623 - 25878531
Alignment:
Q  20 cataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  25878623 cataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttaacaca 25878531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 12638892 - 12638818
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  12638892 acatccaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaaaatccaactcaaaatcaacat 12638818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 12644553 - 12644485
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  12644553 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaaaatccaactcaaaatcaacat 12644485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 24829172 - 24829105
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||    
T  24829172 aatccataccaaaaatcacattcatatgcttcaacggaagaca-aaaagatccaactcaaaatcaacat 24829105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 34821609 - 34821675
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaaca 83  Q
    |||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34821609 aatccataccaaaa-tcgcatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaaca 34821675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 23113394 - 23113434
Alignment:
Q  228 gtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||||||| |||||||||| ||||| ||||||||||||||    
T  23113394 gtagcaccagtatcaataatagcaattaaaggagtactatt 23113434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 16 - 408
Target Start/End: Original strand, 16100707 - 16101099
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16100707 aatccataccaaaaatcacatccatatgcttcaacggaagacacgcaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 16100806  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||  |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  16100807 aaaagaagtagtcaccgaaccgctagtcggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 16100906  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  || |||||||| || |    
T  16100907 ataaaaaaatgagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacaaatacttcggataagattatccggttgctccacctctt 16101006  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 408  Q
    | ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  16101007 ccgcattcaaagcaaacacctttcccgccgccttctttggcttggtacacttagtactaatatgacccttctctccacaattgtagcaagtaa 16101099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 16 - 407
Target Start/End: Complemental strand, 16379962 - 16379571
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  16379962 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 16379863  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  16379862 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 16379763  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  16379762 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 16379663  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 407  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  16379662 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 16379571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 16647558 - 16647165
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  16647558 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 16647459  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||  |||||||  || |||||  | ||||||||  ||||||||||||| | |||| | | |||| ||||| |||||    
T  16647458 aaaagaagtagtcaccgaaccgctagtcggggtgtcaataaccattccacgcaacaaatgagttacaaccaaatccaaacgtttaacacaactagccgag 16647359  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  16647358 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 16647259  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  16647258 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 16647165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 16 - 272
Target Start/End: Original strand, 18401337 - 18401593
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||     
T  18401337 aatccataccaaaaatcacatccatatgcttcaacggaagagacacaagatccaactcaaaatcaacattaccgaaattaacaggacacttagcacacat 18401436  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||| ||||| ||||   ||||||  || |||||  | |||||||| |||||| |||||||||||||| | |||||| |||||||||||    
T  18401437 aaaagaagtagtcactgaaccgctagtcagggtgtcaataaccattccccgcaacaaaggagttccaaccaatttcaaacgttcaacacaactaaccgag 18401536  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgata 272  Q
     |||||| |  |||| |||||||||||||||||||||||||||||||||||||||||    
T  18401537 ataaaagtatcagtaacaccaatatcaataattgcaatcaaaggagtactattgata 18401593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 233 - 409
Target Start/End: Original strand, 14149316 - 14149492
Alignment:
Q  233 accaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaac 332  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   | || ||||||||||| |||||||| ||||||    
T  14149316 accagtatcaataattgcaatcaaaggagtactatcgataaaacacatacctcggataagattatccagttgttccacttcctccgcattcaatgcaaac 14149415  T
Q  333 acctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    ||||| || ||||||||||||||||||||||| ||| |||| |||||||| ||||  ||||||||||| ||||||||    
T  14149416 accttccctgccgccttcttcggcttggtacaattagtactgatatgacccttctcaccacaattgtaacaagtaat 14149492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 1646403 - 1646239
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  1646403 aatccataccaaaaatcacatccatatgcttcaacggaagaaaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 1646304  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagtta 180  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||    
T  1646303 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagtta 1646239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 18578113 - 18578212
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  18578113 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaagacacttagcacacac 18578212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 52 - 236
Target Start/End: Original strand, 14133824 - 14133993
Alignment:
Q  52 gaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgtt 151  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||| ||  |||||||               ||||||||     
T  14133824 gaagacacacaagatccagctcaaaatcaaccttaccaaaattaacaggacacttagcacacactaaggaagtagt---------------tggggtgtc 14133908  T
Q  152 gatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcacca 236  Q
     ||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||    
T  14133909 aatgaccatccctcgcaacaacggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaagaatgagtagcacca 14133993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 23025356 - 23025251
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||| ||||||| ||||||||||    
T  23025356 acatccaatccataccaaaaatcacatccatatgcttcaacggaagacgcacaagatccaactcaaaatcaatgttaccaaaattaacaagacacttagc 23025257  T
Q  110 acacac 115  Q
    ||||||    
T  23025256 acacac 23025251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 16235051 - 16235149
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||||| | |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16235051 aatccaaaacaaaaatcacatccatatgcttcaatggaagacaaacaagatccaactcaaaatcaacattaccaa-attaacaggacacttagcacacac 16235149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 19985789 - 19985697
Alignment:
Q  20 cataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 112  Q
    ||||| |||||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  19985789 catacaaaaaatcacatctatatgcttcaacggaagacaaacaggatccaactcaaaatcaacattaccaaaattaacaggacacttaacaca 19985697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 18836252 - 18836178
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  18836252 acatccaatccataccaaaaatcacatccatatgcttcaacggaagacagacaagatccaactcaaaatcaacat 18836178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 417
Target Start/End: Complemental strand, 21412811 - 21412714
Alignment:
Q  320 attcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaatattcttcg 417  Q
    |||||||||||||||  |||| ||||||||||||| |||| |||||||| ||||||||| ||| |||| |||||||||||| ||||||| || |||||    
T  21412811 attcaaagcaaacactgttcccgccgccttcttcgacttgatacacttagtactaatataacccttctctccacaattgtatcaagtaacatccttcg 21412714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 18182744 - 18182705
Alignment:
Q  228 gtagcaccaatatcaataattgcaatcaaaggagtactat 267  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  18182744 gtagcaccaatatcaataatagcaattaaaggagtactat 18182705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 21474502 - 21474568
Alignment:
Q  226 gagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataag 292  Q
    ||||||||||| |||| ||||| ||||| |||||||||||||| |  ||||| ||||||| ||||||    
T  21474502 gagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaaatacctctgataag 21474568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 14 - 409
Target Start/End: Original strand, 14999472 - 14999867
Alignment:
Q  14 caaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacac 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  14999472 caaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacac 14999571  T
Q  114 acaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccg 213  Q
    | |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||    
T  14999572 ataaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccg 14999671  T
Q  214 aggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttc 313  Q
    || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||    
T  14999672 agataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacgcatacctcggataagattatctggctgctccacctc 14999771  T
Q  314 ctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  14999772 ctccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 14999867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 15290602 - 15290209
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  15290602 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 15290503  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  15290502 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 15290403  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  15290402 ataaaagaatgagtagcaccactatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacttcct 15290303  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | || ||||||| |||||||||||  |||||||||||||| | |||||||||  ||||||||||||| |||| |||| ||||||||||||||||    
T  15290302 ccgcgttcaaagaaaacacctttctcgccgccttcttcggttgggtacacttggtactaatatgacccttctctccataattgtagcaagtaat 15290209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 18 - 416
Target Start/End: Complemental strand, 12340309 - 12339909
Alignment:
Q  18 tccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaa 117  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||| ||||| |    
T  12340309 tccataccaaaaatcacgtccatgtgcttcaacggaagacacacaagatccaactcaaagtcaacattaccagagttaacatgacacttagcgcacacca 12340210  T
Q  118 aacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggt 217  Q
    |  ||||||||||||||||||| |  ||||||| ||||||| |  |||||||||||||||| |||||||| |||||| | |||||| ||||||||||| |    
T  12340209 aggaagtagtcaccgaaccactggtcggggtgtcgatgaccctccctcgcaacaacggagtcacaaccaaattcaaacgttcaacacaactaaccgagat 12340110  T
Q  218 aaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat--aaaacacatacctcggataagattatttggctgctccacttcct 315  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||| ||||||| | | || || || || |    
T  12340109 aaaagaatgagtaggaccaatatcaataatcgcaatcaaaggagtactattgataaaaaatacatacctcggatgagattatcttgttgttcgacctcat 12340010  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaatattctt 415  Q
    | ||||||||| |||||||||| || | |||||||||||| |||||||||||| |||| ||||||||   || ||| || ||||| |||||||||| |||    
T  12340009 ccgcattcaaatcaaacaccttacccgacgccttcttcggtttggtacacttagtactgatatgacctgactctccgcagttgtaacaagtaatatcctt 12339910  T
Q  416 c 416  Q
    |    
T  12339909 c 12339909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 9292994 - 9293093
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9292994 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaaaatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 9293093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 15139113 - 15139015
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||||||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15139113 aatccataccaaaaattacatccataagcttcaacggaagaca-acaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 15139015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 3262037 - 3261986
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  3262037 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 3261986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 7357296 - 7357347
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  7357296 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 7357347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 11204475 - 11204424
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  11204475 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 11204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 29450780 - 29450729
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  29450780 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 29450729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 26253 - 26646
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  26253 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 26352  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  26353 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 26452  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  26453 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 26552  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| || ||||||||||||||||||    
T  26553 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctcgacaattgtagcaagtaat 26646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 258; Significance: 1e-143; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 90359 - 90752
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  90359 aatccataccaaaaatcacatccatacgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 90458  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| | ||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  90459 aaaagaagtagtcaccgaaccgccagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 90558  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  || |||||||| ||||    
T  90559 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcagataagattatccggttgctccacctcct 90658  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||||||    
T  90659 ccgcattcaaagcatacacctttcccgccgccttcttcggcttggtacacttagtactaatataacctttctctccacaattgtatcaagtaat 90752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 8014 - 8407
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| ||| |||||||||||||||||||     
T  8014 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatacaacttaaaatcaacatcaccaaaattgacaggacacttagcacacat 8113  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | || ||||| || |||||||||| ||||||| |||||||| |||||||||||    
T  8114 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccggaacaaaggggttacaaccattttcaaacgctcaacacaactaaccgag 8213  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |    
T  8214 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcagataagattattcggctgctccacttctt 8313  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  8314 ccgcattcaaagcaaacacctttcccgccgccttcttcggattggtacacttagtactaatatgacccttctctccagaattgtagcaagtaat 8407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 81 - 409
Target Start/End: Complemental strand, 21257 - 20930
Alignment:
Q  81 acattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagtta 180  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||| |||||||||  ||||||||||| ||||||    
T  21257 acattaccaaaattaataggacacttagcacacactaaagaagtagtcaccgaaccactagccggggtgtcgatgaccatccctcgcaacaacagagtta 21158  T
Q  181 caaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacat 280  Q
    |||| |  |||||| | |||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21157 caac-atgttcaaacggtcaacacaactaaccgagataaaagaatgagtagcaccactatcaataattgcaatcaaaggagtactattgataaaacacat 21059  T
Q  281 acctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatga 380  Q
    ||||| |||||||||||  ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||     
T  21058 acctcagataagattatccggctgctccacttcctccgcaatcaaagcaaacacctttcctgccgccttctttggcttggtacacttagtactgatatgt 20959  T
Q  381 ccattctttccacaattgtagcaagtaat 409  Q
    || ||||  | ||||||||| ||||||||    
T  20958 cctttctcacaacaattgtaacaagtaat 20930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 81 - 409
Target Start/End: Complemental strand, 30833 - 30506
Alignment:
Q  81 acattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagtta 180  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||| |||||||||  ||||||||||| ||||||    
T  30833 acattaccaaaattaataggacacttagcacacactaaagaagtagtcaccgaaccactagccggggtgtcgatgaccatccctcgcaacaacagagtta 30734  T
Q  181 caaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacat 280  Q
    |||| |  |||||| | |||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30733 caac-atgttcaaacggtcaacacaactaaccgagataaaagaatgagtagcaccactatcaataattgcaatcaaaggagtactattgataaaacacat 30635  T
Q  281 acctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatga 380  Q
    ||||| |||||||||||  ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||     
T  30634 acctcagataagattatccggctgctccacttcctccgcaatcaaagcaaacacctttcctgccgccttctttggcttggtacacttagtactgatatgt 30535  T
Q  381 ccattctttccacaattgtagcaagtaat 409  Q
    || ||||  | ||||||||| ||||||||    
T  30534 cctttctcacaacaattgtaacaagtaat 30506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 21307 - 21255
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacaca 62  Q
    ||||| |||| ||||||||||||||||| |||| |||||||||||||||||||    
T  21307 acatccaatcgataccaaaaatcacatctatatgcttcaacggaagacacaca 21255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 30883 - 30831
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacaca 62  Q
    ||||| |||| ||||||||||||||||| |||| |||||||||||||||||||    
T  30883 acatccaatcgataccaaaaatcacatctatatgcttcaacggaagacacaca 30831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 23820 - 24213
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  23820 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 23919  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  23920 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 24019  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  24020 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 24119  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  24120 ctgcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 24213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 254; Significance: 1e-141; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 131936 - 131543
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| |||||| ||||||||||     
T  131936 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacttaaaattaacattaccaaaattaataggacatttagcacacat 131837  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  131836 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgatcaacacaactaaccgag 131737  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     ||||| || ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  131736 ataaaataatgagtagcacaagtatcaataattgcaatcaaaggagttctattgataaaacacatacctcggataagattatccggctgctccacctcct 131637  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  131636 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttagtactaatatgacccttctctccacaattgtagcaagtaat 131543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 26634 - 27026
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||     
T  26634 aatctataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaatt-aacattaccaaaattaacaggacacttagcacacat 26732  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||| | |||||||| ||||| ||||||||   ||||   | |||| ||||||  |||    
T  26733 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccataccacgcaacaaaggagtaacaaccaaaaacaaacaataaacacaactaaaagag 26832  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     ||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  26833 ataaaagaataagtagcaacagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggttgctccacttcct 26932  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||| | ||| ||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||    
T  26933 ccgcattcaaagcaaacaccttttccgcccccttcttcggcttggtaaacttagtactaatatgacctttctctccacaattgtagcaagtaat 27026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 20527896 - 20528289
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  20527896 aatccatatcaaaaatcacatccatatgctttaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 20527995  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||  |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  20527996 aaaagaagtagtcaccgaacctctagtcggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgag 20528095  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||    
T  20528096 ataaaagaatgagtagcaccaggatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatgcggctgttccacctcct 20528195  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||    
T  20528196 ccgcattcaaagcaaacacctttcccgctgccttcttcggcttggtacacttagtactaatatgacctttctctccacaattgtaacaagtaat 20528289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 405
Target Start/End: Original strand, 20927897 - 20928286
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||     
T  20927897 aatccataccaaaaatcacatctatatgcttcaacggaagacaaacaagatctaactcaaaatcaacattaccaaaattaacaggacatttagcacacat 20927996  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | || ||||| ||||||| ||||||||||||| | |||||| |||||||||||    
T  20927997 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgtaacaaaggagttataaccaatttcaaacgatcaacacaactaaccgag 20928096  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||||    
T  20928097 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcaaataagattatccggctgctccacctcct 20928196  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaag 405  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||    
T  20928197 ctgcattcaaagcaaacacctttcctgccgccttcttcggcttggtacacttagtactaatatgacctttctctccacaattgtaacaag 20928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 16 - 407
Target Start/End: Complemental strand, 20828908 - 20828517
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  20828908 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 20828809  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  20828808 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 20828709  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  20828708 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 20828609  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 407  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  20828608 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 20828517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 10 - 269
Target Start/End: Complemental strand, 22133274 - 22133015
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  22133274 acatccaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaataggacacttagc 22133175  T
Q  110 acacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaacta 209  Q
     ||||||||||||||||||||||||||| |||| ||||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||| |||||    
T  22133174 gcacacaaaacaagtagtcaccgaaccattagccggggtgtcgatgaccatccctcgcaacaacggagttagaaccaatttcaaatgctcaacacaacta 22133075  T
Q  210 accgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattg 269  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||    
T  22133074 accgaggtaaaagaatgagtagcaccggtatcaataattgcaatcaaaggattactattg 22133015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 41215378 - 41215019
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| |||| |||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||| ||  ||||||| ||||||| ||||||||||    
T  41215378 acatccaatcaataccaaaaatcacatccatatgctaaaacggaagacaaacaagatccaactcaaaattaatgttaccaaaattaacatgacacttagc 41215279  T
Q  110 acacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaacta 209  Q
    |||||| ||  |||||||||||||    ||||| ||||||| ||| |||||  ||||||||||||||||||||||||| |||||| |||||||| |||||    
T  41215278 acacactaaggaagtagtcaccga----ctagccggggtgtcgataaccatccctcgcaacaacggagttacaaccaaattcaaacgctcaacacaacta 41215183  T
Q  210 accgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctcca 309  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||  || |||||||    
T  41215182 accgagataaaagaatgagtagcaccagtatcaataattgcaatccaaggagtactgctgataaaacacatacatcggataagattatccggttgctcca 41215083  T
Q  310 cttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattact 373  Q
    ||||||| |||||||| |||||||||||||| | ||||||||| |||||||||||| |||||||    
T  41215082 cttcctcggcattcaatgcaaacacctttcccgtcgccttctttggcttggtacacatattact 41215019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 263 - 416
Target Start/End: Complemental strand, 22129708 - 22129555
Alignment:
Q  263 actattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggta 362  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22129708 actattgataaaacaaatacctcgggtaagattatctggctgctccacttcctctgcattcaaagcaaacacctttcctgccgccttcttcggcttggta 22129609  T
Q  363 cacttattactaatatgaccattctttccacaattgtagcaagtaatattcttc 416  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  22129608 cacttagtactaatatgacccttctctccacaattgtagcaagtaatatccttc 22129555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 9 - 310
Target Start/End: Original strand, 20171998 - 20172300
Alignment:
Q  9 gacatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttag 108  Q
    |||||| | ||| |||| |||||||||||||||| |  |||||| |  || ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  20171998 gacatccagtccttaccgaaaatcacatccatattcaccaacggcaagcaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttag 20172097  T
Q  109 cacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaact 208  Q
    |||| || ||  |||| | |||||| |||   |  ||||| | ||||| |||  ||| ||||||| |||||| ||||||  ||||| | |||||| ||||    
T  20172098 cacaaactaaggaagttgccaccgagccatcggtcggggtatcgatgaacattcctctcaacaacagagttaaaaccaaactcaaacgttcaacacaact 20172197  T
Q  209 aaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat-aaaacacatacctcggataagattatttggctgctc 307  Q
    || |||| | ||||||   ||||||| | |||||| |||| |||||||| ||||||||||||| ||||||||||||||  || |||||||  ||||||||    
T  20172198 aagcgagatgaaagaatacgtagcactagtatcaacaatttcaatcaaatgagtactattgataaaaacacatacctcaaatgagattatccggctgctc 20172297  T
Q  308 cac 310  Q
    |||    
T  20172298 cac 20172300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 20075024 - 20074973
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  20075024 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 20074973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 20297456 - 20297507
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  20297456 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 20297507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 31537312 - 31537261
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  31537312 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 31537261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 38910141 - 38910090
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  38910141 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 38910090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 48425948 - 48425999
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  48425948 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 48425999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 52988816 - 52988867
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  52988816 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 52988867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 16379149 - 16379185
Alignment:
Q  228 gtagcaccaatatcaataattgcaatcaaaggagtac 264  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  16379149 gtagcaccaatatcaataatagcaattaaaggagtac 16379185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 10 - 408
Target Start/End: Original strand, 4442738 - 4443136
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||| |||| || ||||| ||||    
T  4442738 acatcaaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatacaactcaaaatcaatgttaccaaaattagcatgacacctagc 4442837  T
Q  110 acacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaacta 209  Q
    |||||| ||  ||||||| |||||||||||||| |||||||  ||||||||  ||||||||||||||||||||||||| |||||| |||||||| |||||    
T  4442838 acacactaaggaagtagttaccgaaccactagccggggtgtcaatgaccatccctcgcaacaacggagttacaaccaaattcaaacgctcaacacaacta 4442937  T
Q  210 accgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctcca 309  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  4442938 accgaggtagaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctcca 4443037  T
Q  310 cttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 408  Q
    |||||||  ||| |||||||||||||||||| ||||||||||| |||||||||||||||  ||| |||||||| ||||  ||||||||||| |||||||    
T  4443038 cttcctccacatacaaagcaaacacctttcccgccgccttctttggcttggtacacttagaactgatatgacctttctcaccacaattgtaacaagtaa 4443136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 16 - 407
Target Start/End: Original strand, 7826717 - 7827108
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  7826717 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 7826816  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  7826817 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 7826916  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  7826917 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 7827016  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 407  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  7827017 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 7827108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 16 - 407
Target Start/End: Complemental strand, 27105227 - 27104836
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  27105227 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 27105128  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  27105127 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 27105028  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  27105027 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 27104928  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 407  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  27104927 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 27104836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 16 - 407
Target Start/End: Original strand, 27173098 - 27173489
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  27173098 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 27173197  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||   |||| | |||||| ||||| |||||    
T  27173198 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaaacccaaacgttcaacacaactagccgag 27173297  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  27173298 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 27173397  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 407  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  27173398 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 27173489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 10 - 400
Target Start/End: Original strand, 13458846 - 13459234
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| |||||||||||||||||||||||||||  |||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  13458846 acatccaatccataccaaaaatcacatccatatggttcaacggcatacacacaaaatccaactcaaaatcaacattaccaaaattaacaggacacttagc 13458945  T
Q  110 acacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaacta 209  Q
    ||||   ||| ||||||||||| |||||||||| |||||||||||||||||  ||||||||||| |||||||||| || ||||||||||||||| |||||    
T  13458946 acact--aaagaagtagtcacctaaccactagccggggtgttgatgaccatccctcgcaacaacagagttacaactaaattcaaatgctcaacacaacta 13459043  T
Q  210 accgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctcca 309  Q
    |||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||    
T  13459044 accgaaataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggagaagattatccgtctgctcca 13459143  T
Q  310 cttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgta 400  Q
    ||||||| |||||||| |||||||| ||||| | | ||||||||  ||||||||||||| |||| |||||||| ||||  |||||||||||    
T  13459144 cttcctccgcattcaatgcaaacacttttcccgtcaccttcttcaacttggtacacttagtactgatatgacccttctcgccacaattgta 13459234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 14207264 - 14207456
Alignment:
Q  142 ctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatc 241  Q
    ||||||| | |||||||||  | ||| ||||||||||||||||||| |||||| | |||||| |||||||||||   |||  | ||||||| ||| |||     
T  14207264 ctggggtatcgatgaccattccacgcgacaacggagttacaaccaaattcaaacgttcaacacaactaaccgagaccaaa--atgagtagcgccagtatt 14207361  T
Q  242 aataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctt 337  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||||||||| ||||||||    
T  14207362 aataattgcaattaaaggagtactattgataaaacacatacctc-aataagattatatggctgctccacttactccgcattcaaagcgaacacctt 14207456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 337
Target Start/End: Original strand, 14215954 - 14216146
Alignment:
Q  142 ctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatc 241  Q
    ||||||| | |||||||||  | ||| ||||||||||||||||||| |||||| | |||||| |||||||||||   |||  | ||||||| ||| |||     
T  14215954 ctggggtatcgatgaccattccacgcgacaacggagttacaaccaaattcaaacgttcaacacaactaaccgagaccaaa--atgagtagcgccagtatt 14216051  T
Q  242 aataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctt 337  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||||||||| ||||||||    
T  14216052 aataattgcaattaaaggagtactattgataaaacacatacctc-aataagattatatggctgctccacttactccgcattcaaagcgaacacctt 14216146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 11284627 - 11284726
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11284627 aatccataccaaaaatcacatccatatgcttcaatggaagacacacaaaatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 11284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 152 - 367
Target Start/End: Original strand, 22034950 - 22035165
Alignment:
Q  152 gatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgca 251  Q
    |||||||||  ||| ||| || ||||||| |||||| |||||| | |||||| |||||| |||| | |||||| | ||||||| | |||||| | |||||    
T  22034950 gatgaccatccctctcaagaatggagttaaaaccaaattcaaaggttcaacacaactaagcgagatgaaagaatgcgtagcacaagtatcaacatttgca 22035049  T
Q  252 atcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttct 351  Q
    |||||| |||||||||||||||||||||||||||  || | |||||  ||||||||||| |||||  ||||||| ||||| ||  ||||    |||||||    
T  22035050 atcaaatgagtactattgataaaacacatacctcatattaaattatccggctgctccacgtcctcaacattcaatgcaaaaactcttcccatggccttct 22035149  T
Q  352 tcggcttggtacactt 367  Q
    ||||||||||||||||    
T  22035150 tcggcttggtacactt 22035165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 367
Target Start/End: Complemental strand, 17142582 - 17142404
Alignment:
Q  189 ttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcgga 288  Q
    |||||| | |||||| |||||| |||| |||||||| ||  ||||||   ||||||||||||||||||  || ||||  ||||||||||||| ||||  |    
T  17142582 ttcaaacgttcaacacaactaagcgagataaaagaatgaaaagcacccgaatcaataattgcaatcaattgaatactgatgataaaacacatccctcaaa 17142483  T
Q  289 taagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacactt 367  Q
    | | |||||| | ||||| ||| || ||||||||||| ||||| ||||||||  ||||||||||||| |||||||||||    
T  17142482 ttaaattattcgtctgcttcacctcttctgcattcaatgcaaagacctttcctcccgccttcttcggtttggtacactt 17142404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 17926436 - 17926501
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaa 81  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  17926436 aatccataccagagatcacatccatatgcttcaacggaagacacacaggatccaactcaaaatcaa 17926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 285
Target Start/End: Original strand, 17131545 - 17131758
Alignment:
Q  72 tcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaaca 171  Q
    |||||||| ||||| |||| ||||||| |||||||| |||| || ||  ||||||||||||| | | | |  ||||| | |||||||||   || |||||    
T  17131545 tcaaaatccacatttccaaaattaacaagacacttaacacaaaccaaggaagtagtcaccgagctattggtcggggtatcgatgaccatccatctcaaca 17131644  T
Q  172 acggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat 271  Q
     |||||| | ||| |  |||||| | ||  || |||||| |||  |||||||| | ||||||||  ||||||||||| ||||||| |||||||| ||| |    
T  17131645 tcggagtcataacaatattcaaacgttccgcacaactaagcgatataaaagaatgggtagcacccgtatcaataattacaatcaatggagtactgttgtt 17131744  T
Q  272 aaaacacatacctc 285  Q
    ||||||||||||||    
T  17131745 aaaacacatacctc 17131758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 21755431 - 21755482
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  21755431 taaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactatt 21755482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 26115820 - 26115769
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  26115820 taaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactatt 26115769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 13965898 - 13965847
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  13965898 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 13965847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 26092028 - 26091977
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  26092028 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 26091977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 40925047 - 40924996
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  40925047 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 40924996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 49155320 - 49155371
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  49155320 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 49155371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 416
Target Start/End: Original strand, 14218206 - 14218279
Alignment:
Q  343 ccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaatattcttc 416  Q
    |||||||||||||||||||||||||| |||| ||||| ||   || |||||| ||| | |||||||||| ||||    
T  14218206 ccgccttcttcggcttggtacacttagtactgatatggcctgcctctccacagttgaaacaagtaatatccttc 14218279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 10 - 406
Target Start/End: Complemental strand, 6458 - 6061
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaata-ttaacaggacacttag 108  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  6458 acatccaatccataccaaaaatcacatccatatgcttcaacggaacacacacaagatccaactcaaaatcaacattaccaaaaattaacagggcacttag 6359  T
Q  109 cacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaact 208  Q
    ||||||| ||  |||||||||| ||||||||||| ||||||| |||||||||  ||||||| |||||||| |||||||| |||||| |||||||| ||||    
T  6358 cacacactaaggaagtagtcactgaaccactagccggggtgtcgatgaccattcctcgcaataacggagtcacaaccaaattcaaacgctcaacacaact 6259  T
Q  209 aaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctcc 308  Q
    ||||||| |||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||    
T  6258 aaccgagataaaagaatgagtagcaccagtatcaattattgcaatcaaagtagtactattgataaaacacatacctcagataagattatccggctgctcc 6159  T
Q  309 acttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 406  Q
    |||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||| ||||| ||||||||||| |||||    
T  6158 acttcctccgcattcaatgcaaacacctttcccgccgccttctttggcttggtacacttagtactgatatgacccttcttaccacaattgtaacaagt 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 1399 - 1006
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||     
T  1399 aatccataccaaaaatcacatccatatgcttcaacagaagacaaacaagatccaactcaaaatcaacattaccaaaattaataggacacttagcacacat 1300  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||| | |||||   ||||| ||| |||||  | |||||||| |||||||| |||||||||||| | |||||| |||||| ||||    
T  1299 aaaagaagtagtcaccgaaacgctagccaaggtgtcgataaccattccccgcaacaaaggagttacgaccaatttcaaacgttcaacacaactaatcgag 1200  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  1199 ataaaagaatgagtagcaccagtatctataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccagctgctccacttcct 1100  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||    
T  1099 ccgcattcaaagcaaacacctttcccaccgccttcttcggcttggtacacttagtactaatgtgacccttctctccacaattgtagcaagtaat 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 243; Significance: 1e-134; HSPs: 2)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 16 - 406
Target Start/End: Complemental strand, 1068 - 678
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||     
T  1068 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcagtattaccaaaattaacaggacacttagcacacat 969  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||||||||| |||||||  || |||||  |  || |||| ||||||||||||||||||||| | |||| | |||||||||||    
T  968 aaaagaagtagtcaccgaaccactagccggggtgtcaataaccatcccctgcgacaaaggagttacaaccaatttcaaacgttcaatacaactaaccgag 869  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||    
T  868 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcagataagattatccggctgctccacctcct 769  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 406  Q
    | ||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||| |||| ||||||||| || |||||    
T  768 ccgcattcaaagcaaacacctttcccgccgccttcttcggtttggtacacttggtactaatatgacctttctctccacaattataacaagt 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 174 - 406
Target Start/End: Complemental strand, 13620 - 13388
Alignment:
Q  174 ggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataa 273  Q
    ||||||||||||||||||||| | |||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13620 ggagttacaaccaatttcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataa 13521  T
Q  274 aacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattact 373  Q
    |||||||||||| |||||||||||  ||||||||||| || || ||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||    
T  13520 aacacatacctctgataagattatccggctgctccacctcttccgcattcaaagcaaacacctttcccgccgccttcttcggtttggtacacttggtact 13421  T
Q  374 aatatgaccattctttccacaattgtagcaagt 406  Q
    ||||||||| |||| ||||||||| || |||||    
T  13420 aatatgacctttctctccacaattataacaagt 13388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 25035 - 25429
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||     
T  25035 aatccataccaaaaatcacatccatatgctttaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaataggacatttagcacccat 25134  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| ||||||||||||| || ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  25135 aaaagaagtagtcaccgatccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacataactaaccgag 25234  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat-aaaacacatacctcggataagattatttggctgctccacttcc 314  Q
     |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  || ||||||| ||||    
T  25235 ataaaagaatgagtagcaccagtatcaataattgcaattaaaggagtactattgataaaaacacatacctcggataagattatccggttgctccagttcc 25334  T
Q  315 tctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    || ||||||||||||||| ||||||  |||||||||| |||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  25335 tccgcattcaaagcaaacgcctttcttgccgccttctccggctttgtacacttagtactaatatgacccttctctccacaattgtagcaagtaat 25429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 238; Significance: 1e-131; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 74044 - 73651
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||     
T  74044 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatcgaactcaaaatcaacattaacaaaattaacaggacacttagcacacat 73945  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | ||||| |  ||||||||||||||||||||| | |||||| |||||||||||    
T  73944 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaatagaggagttacaaccaatttcaaacgttcaacacaactaaccgag 73845  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  || |||||||| ||||    
T  73844 ataaaacaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcatataagattatccggttgctccacctcct 73745  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    |  ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||||    
T  73744 cgacattcaaagcaaacacctttcccaccgccttcttcggcttggtacacttagtactaatatgacccttctctccgcaattgtagcaagtaat 73651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 78425 - 78032
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||     
T  78425 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatcgaactcaaaatcaacattaacaaaattaacaggacacttagcacacat 78326  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | ||||| |  ||||||||||||||||||||| | |||||| |||||||||||    
T  78325 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaatagaggagttacaaccaatttcaaacgttcaacacaactaaccgag 78226  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  || |||||||| ||||    
T  78225 ataaaacaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcatataagattatccggttgctccacctcct 78126  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    |  ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||||    
T  78125 cgacattcaaagcaaacacctttcccaccgccttcttcggcttggtacacttagtactaatatgacccttctctccgcaattgtagcaagtaat 78032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 103 - 409
Target Start/End: Original strand, 181934 - 182240
Alignment:
Q  103 acttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaac 202  Q
    |||||||| ||| |||  |||||||||||||||| ||||| |||||||  || |||||  | ||||| || ||||||||||| ||||||||| | |||||    
T  181934 acttagcagacataaatgaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaaaaaaggagttacaacgaatttcaaacgttcaac 182033  T
Q  203 aaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggc 302  Q
    | ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  182034 acaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggc 182133  T
Q  303 tgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagc 402  Q
    |||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||    
T  182134 tgctccacctcctccgcattcaaagcaaacacctttcacgccgccttcttcggcttggtacacttagtactaatctgacccttctctccacaattgtagc 182233  T
Q  403 aagtaat 409  Q
    |||||||    
T  182234 aagtaat 182240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 175958 - 175701
Alignment:
Q  18 tccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaa 117  Q
    ||||||||||||||||||||||| | ||| ||||||||| |||||||| ||||||||||||||||||||||||  ||||| |||||||||| ||||   |    
T  175958 tccataccaaaaatcacatccatgtgctttaacggaagaaacacaagaaccaactcaaaatcaacattaccaaagttaacgggacacttagaacacctca 175859  T
Q  118 aacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggt 217  Q
    |  ||||||||||||||||||| |  ||||| | |||||||||  ||| ||| |||||||| |||||||| |||||| | | |||| ||||||| ||| |    
T  175858 aggaagtagtcaccgaaccactggtcggggtatcgatgaccattcctcacaataacggagtcacaaccaaattcaaacgtttaacacaactaacggagat 175759  T
Q  218 aaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaa 275  Q
     |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  175758 gaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaa 175701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 16 - 406
Target Start/End: Original strand, 34942 - 35332
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||     
T  34942 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacatttagcacacat 35041  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| |||||||||||    
T  35042 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatacaaacgttcaacacaactaaccgag 35141  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| || |    
T  35142 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgttccacctctt 35241  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 406  Q
    ||||||||||||||||||| || ||  |||||||||| ||||||||||| ||  ||||||||||||| |||| ||||||||| ||||||||    
T  35242 ctgcattcaaagcaaacactttccccaccgccttctttggcttggtacaattggtactaatatgacccttctctccacaattatagcaagt 35332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 23508426 - 23508810
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||     
T  23508426 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatctaactcaaaatcaacattaccaaaattaacaggacacttaacacacat 23508525  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| ||||||||||| |||| ||||| |||||||| || |||||  | |||||||| ||||||||| ||||||||||| | |||||| |||||||||||    
T  23508526 aaaagaagtagtcaccaaaccgctagccggggtgttaataaccattccccgcaacaaaggagttacagccaatttcaaacgttcaacacaactaaccgag 23508625  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||           
T  23508626 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccgactgctcc------- 23508718  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
      ||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||    
T  23508719 --gcattcaaagcaaacacctttcccgctgccttcttcggcttggtacacttagtactaatatgactcttctctccacaattgtagcaagtaat 23508810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 24583952 - 24584336
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||     
T  24583952 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaatatcaccaaaattaacaggacacttagcacacat 24584051  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  24584052 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 24584151  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  24584152 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 24584251  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||||| || ||||||||||||||||         ||||||||||||| |||| |||||||||||| ||||||||    
T  24584252 ccgcattcaaagcaaacacctttcccgctgccttcttcggcttgg---------tactaatatgacccttctctccacaattgtaacaagtaat 24584336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 21934814 - 21934643
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  21934814 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 21934715  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaa 187  Q
    |||| |||||||||||||||| |||||  ||||||  || |||||  | |||||||| ||||||||||||||    
T  21934714 aaaagaagtagtcaccgaaccgctagccagggtgtcaataaccattccacgcaacaaaggagttacaaccaa 21934643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 23505316 - 23505383
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  23505316 aatccatac-aaaaatcacatccatatgcttcaacagaagacaaacaagatccaactcaaaatcaacat 23505383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 14884416 - 14884365
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  14884416 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 14884365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 20345225 - 20345276
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  20345225 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 20345276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 22505622 - 22505673
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  22505622 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 22505673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 25851015 - 25851091
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataaga 293  Q
    ||||| || ||||||||||| |||||||||| ||||| ||| |||||||||| |  |||||  |||||| |||||||    
T  25851015 taaaacaatgagtagcaccagtatcaataatagcaattaaatgagtactattaaagaaacaagtacctctgataaga 25851091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 5253 - 4859
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||     
T  5253 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacacaaaatcaacatcaccaaaattaacagaacacttagcacacat 5154  T
Q  116 aaaacaagtagtcaccgaaccactagctgggg-tgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccga 214  Q
    |||| |||||||||||||||| ||||| |||| |||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| ||||    
T  5153 aaaagaagtagtcaccgaaccgctagccgggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccga 5054  T
Q  215 ggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcc 314  Q
    | |||||||| ||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  5053 gataaaagaatgagtagcaccagtatcgataattgcaatcaaaggagtattattgataaaacacatacctcggataagattatccggctgctccacctcc 4954  T
Q  315 tctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  4953 tctgcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 4859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 13072 - 12679
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  13072 aatccataccaaaattcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 12973  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| ||||||||||  |||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  12972 aaaagaagtagtcactaaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgag 12873  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||| |  |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  12872 ataaaagtattagtatctccattatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 12773  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||| ||||||||| ||||||||||| ||||||||||||||  ||||||||||| | |||| |||| ||||||| ||||||||    
T  12772 ccgcattcaaagcaatcacctttcccgccgccttctttggcttggtacacttggtactaatatgaactttctctccagaattgtaacaagtaat 12679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 409
Target Start/End: Original strand, 1068 - 1461
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||     
T  1068 aatccataccaaaaatcacatccatatgcttcaacggaagagaaacaagatccaactcaaaatcaacatcaccaaaattaacaagacacttagcacacat 1167  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||   |||| | |||||| |||||||||||    
T  1168 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaaaaacaaacgttcaacacaactaaccgag 1267  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||  ||||    
T  1268 ataaaagaatgagtagcaccagtatcaataattgaaatcaaaagagtactattgataaaacacatacctcggataagattatccagctgctccagctcct 1367  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    | ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||    
T  1368 ccgcattcaaagcaaacacctttgccgctgccttcttcggcttggtacacttagtactaatatgacctttctctccacaattgtaacaagtaat 1461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 16 - 409
Target Start/End: Complemental strand, 7308 - 6914
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||     
T  7308 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaactggacatttagcacacat 7209  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||  |||||||||| ||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||  |||||||||||    
T  7208 aaag-aagtagtcactgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgatcaacgcaactaaccgag 7110  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  7109 ataaaagaataagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 7010  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattacta--atatgaccattctttccacaattgtagcaagtaat 409  Q
    || ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||  |||||||| |||| ||||||||| |||||||||||    
T  7009 ctacattcaaagtaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatatgacccttctctccacaattatagcaagtaat 6914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 2425 - 2785
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| |||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  2425 acatccaatccataccaaaaatcacacccatatgctttaacg-aagacacacaagatccaactcaaaatcaaaattaccaaaattaataggacacttagc 2523  T
Q  110 acacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaacta 209  Q
    |||||| ||  ||||||||||||||| |||||  ||||||| |||||||||  ||||||| ||||||||||||||||| |||||| ||  |||| |||||    
T  2524 acacactaaggaagtagtcaccgaacaactagtcggggtgtcgatgaccatccctcgcaaaaacggagttacaaccaaattcaaacgc--aacacaacta 2621  T
Q  210 accgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctcca 309  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  2622 accgagataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtattattgataaaacacatacctcggataagattatccgactgctcca 2721  T
Q  310 cttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattact 373  Q
    |||||||||||||||| |||||||| ||||| |||||||||||| |||||||||||||||||||    
T  2722 cttcctctgcattcaatgcaaacacttttcccgccgccttcttcagcttggtacacttattact 2785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 387
Target Start/End: Complemental strand, 5751 - 5380
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| |||||||| || ||||||||||||||||||| |||||||||||||||||||||||     
T  5751 aatccataccaaaaatcacatccatatgcttcaacagaagacaaacaagatcaaattcaaaatcaacattaccaaaattaacaggacacttagcacacat 5652  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||  ||||| |||||||  || |||||  | |||||||| ||||||| ||||||||||||| |||||||| |||||||| ||    
T  5651 aaaagaagtagtcaccgaactgctagcaggggtgtcaataaccattccccgcaacaaaggagttataaccaatttcaaacgctcaacataactaaccaag 5552  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  || |||||| | ||||    
T  5551 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacataccacgaataagattatccggttgctccgcctcct 5452  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattct 387  Q
    | ||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  5451 ccgcattcaaagcaaacacttttcccgccgccttcttcggcttggtacacttagtactaatttgacctttct 5380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 16 - 408
Target Start/End: Complemental strand, 4349 - 3958
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||     
T  4349 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaagtcaacattaccaaaattaacagggcatttagcacacat 4250  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||| ||||| |  || |||||  | |||||||| ||||||||||||||||||||| |||||||| || ||| ||||    
T  4249 aaaagaagtagtcaccgaaccgctagccggggtatcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaattaatcgag 4150  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     |||||||| ||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||| | ||| |||||| ||||    
T  4149 ataaaagaatgagtagcaccagtatcgataattgcaatcaacggagtactattgat-aaacacatagctcagataagattatctagctactccacctcct 4051  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 408  Q
    | || ||||||| | |||| ||||| ||||||||||||||||||||||||||| |||| |||||||| ||||  ||||||||||| |||||||    
T  4050 ccgcgttcaaagaagacacttttcccgccgccttcttcggcttggtacacttagtactgatatgacccttctcaccacaattgtaacaagtaa 3958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 406
Target Start/End: Original strand, 15767 - 16157
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||||||||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||     
T  15767 aatccataccaaaactcacatccatatgcttcaacggaaggcaaacaagatccaactcaaaatcagcattaccaaaattaacaggacatttagcacacat 15866  T
Q  116 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 215  Q
    |||| |||||||||||||||| ||||   ||||||  || |||||  |   |||||| |||||||||||||| | |||| | |||||| |||||||||||    
T  15867 aaaagaagtagtcaccgaaccgctagacagggtgtcaataaccattccaaacaacaaaggagttacaaccaaatacaaacgttcaacacaactaaccgag 15966  T
Q  216 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 315  Q
     ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||    
T  15967 ataaaagaataagtaacaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatgcggttgctccacctcct 16066  T
Q  316 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 406  Q
    ||| ||||||||||||||| ||||| |   |||| |||||||||||||||||  |||||||||| || |||| ||||||||| || |||||    
T  16067 ctgaattcaaagcaaacacttttcccgttaccttattcggcttggtacacttggtactaatatggcccttctctccacaattataacaagt 16157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 10621 - 10553
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  10621 aatccataccaaaaattacatccatattcttcaacggaagacatacaagatccaactcaaaatcaacat 10553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 152 - 408
Target Start/End: Complemental strand, 26012 - 25755
Alignment:
Q  152 gatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaa-gagtagcaccaatatcaataattgc 250  Q
    |||||||||  | ||||||||||||||||||| |||||||||| |||||||  ||||||||||| ||||| ||| ||||||||| |||||||||||||||    
T  26012 gatgaccatcccacgcaacaacggagttacaatcaatttcaaacgctcaacgcaactaaccgagataaaaaaaatgagtagcactaatatcaataattgc 25913  T
Q  251 aatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttc 350  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  25912 aatcaaatgagtactattgataaaacacatacctcggataagattatccggctgctccacttcttctgctttcaaagcaaacacctttcccgccgccttc 25813  T
Q  351 ttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 408  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||| |||||||    
T  25812 ttcggcttggtacacttagtactaatatgacctttctctccacaattgtaacaagtaa 25755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 10 - 382
Target Start/End: Original strand, 3350 - 3722
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| ||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||| |||||| |  |||| ||||||||||    
T  3350 acatccaatccataccaaaaatcacatccatgtgcttcaacgaaagacacacaagatccaactctaaatcaacactaccaaaacgaacaagacacttagc 3449  T
Q  110 acacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaacta 209  Q
    |||| | ||  |||||||||| || ||||| |  ||||||| |||||||||  ||||||||||| ||||| ||| ||| |||||| | | |||| |||||    
T  3450 acaccctaacgaagtagtcactgagccactggtcggggtgtcgatgaccatccctcgcaacaacagagttccaaacaaattcaaacgttgaacacaacta 3549  T
Q  210 accgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctcca 309  Q
    |||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||||||| ||| |||||||    
T  3550 accgagatgaaagaatgagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacatgttcctcagataagattatctggttgctcca 3649  T
Q  310 cttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgacc 382  Q
    |||| || ||||||   |||||||| ||| |  |||||||||||||||||||||||||| |||| | ||||||    
T  3650 cttcatccgcattcggtgcaaacactttttcctccgccttcttcggcttggtacacttagtactgaaatgacc 3722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 165 - 409
Target Start/End: Original strand, 2703 - 2953
Alignment:
Q  165 cgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggag--- 261  Q
    |||||||| ||||||||| ||||||||||| |||||||| ||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||         
T  2703 cgcaacaaaggagttacagccaatttcaaaagctcaacacaactaaccgagataaaagaatgagtagcaccggtatcaataattgcaatcaaaggtacta 2802  T
Q  262 ---tactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggctt 358  Q
       |||||||   | |||||| |||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  2803 tgctactattcgcacaacacagacctcggataagattatccggttgctccacttcctccgcattcaaagcaaacacctttctcgccgccttcttcggctt 2902  T
Q  359 ggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 409  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  2903 ggtacacttagtactaatatgacccttctctccacaattgtagcaagtaat 2953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 2579 - 2692
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||     
T  2579 aatccataccaaaaatcacatccatatgctttaacggaaaacacacaagatctaactcaaaatcaacattaccaaaattaacaggacacttagcgcacat 2678  T
Q  116 aaaacaagtagtca 129  Q
    |||| |||||||||    
T  2679 aaaagaagtagtca 2692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 21 - 382
Target Start/End: Complemental strand, 21168 - 20807
Alignment:
Q  21 ataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaac 120  Q
    ||||| |||||||||||||||| ||||||| ||||||| ||||||| |||||||||||| ||  |||||| | |||| ||||||||||||||   |||      
T  21168 ataccgaaaatcacatccatatgcttcaacagaagacaaacaagatacaactcaaaatcgacgctaccaaaactaacgggacacttagcacaactaaagg 21069  T
Q  121 aagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaa 220  Q
    ||||||||||||| ||| | |  ||||| | ||||||| || |||   | ||||||||||| ||||| |||||| | |||||| |||||  ||||   ||    
T  21068 aagtagtcaccgacccattggtcggggtatcgatgaccttacctcctgataacggagttactaccaaattcaaacgatcaacacaactagtcgagaagaa 20969  T
Q  221 agaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgca 320  Q
    |||| |||||| || | |||||| |||| |||||||||||| ||||||||| |||||||||||||||||||||||||   ||  |||||||||||||||     
T  20968 agaatgagtagaactagtatcaacaattacaatcaaaggagcactattgatgaaacacatacctcggataagattatccagcaactccacttcctctgcg 20869  T
Q  321 ttcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgacc 382  Q
    ||||| || || ||  | |  |||||||| ||||||||||| |||||  |||| ||||||||    
T  20868 ttcaatgcgaaaactctccacgccgcctttttcggcttggttcacttggtactgatatgacc 20807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 68 - 382
Target Start/End: Original strand, 77339 - 77653
Alignment:
Q  68 caactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgc 167  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| || ||  ||||||||| | | ||| | ||| |||||| |||||||||  ||       
T  77339 caactcaaaatcaacgttaccaaaattaacaggaaacttagcacaaactaaggaagtagtcatcaagccattggctagggtgtcgatgaccatcccttta 77438  T
Q  168 aacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactat 267  Q
    || ||| |||||| |||||| |||||| | |||||| |||||| |||| | |||||| | ||||||||| |||||| |||| ||| ||||||||||||||    
T  77439 aaaaacagagttaaaaccaaattcaaacgttcaacataactaagcgagatgaaagaatgcgtagcaccagtatcaacaattccaaacaaaggagtactat 77538  T
Q  268 tgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacactt 367  Q
    |||||||| ||||| ||||||| ||||||| ||| |||||||| ||||| || ||||| ||||| ||  | |  ||||| |||||| |||||||||||||    
T  77539 tgataaaatacatatctcggattagattatctggttgctccacctcctcagcgttcaatgcaaaaactctccacgccgctttcttcagcttggtacactt 77638  T
Q  368 attactaatatgacc 382  Q
      |||| ||||||||    
T  77639 ggtactgatatgacc 77653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 2335 - 2434
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  2335 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaagacacttagcacacac 2434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 25012 - 24913
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25012 aatccataccaaaaatcacatccatatgcttcaacgggagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 24913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 252 - 406
Target Start/End: Complemental strand, 9583 - 9429
Alignment:
Q  252 atcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttct 351  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  ||||| ||||| || | | ||||||||||||||||||| || ||||||||||    
T  9583 atcaaatgagtactattgataaaacacatacctcggataagattatccggctgttccacctctttttcattcaaagcaaacaccttccccgccgccttct 9484  T
Q  352 tcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 406  Q
    ||||||||||||| ||  ||||||||||| | ||||  |||||||||||||||||    
T  9483 tcggcttggtacaattggtactaatatgatccttctccccacaattgtagcaagt 9429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 270 - 408
Target Start/End: Original strand, 96637 - 96775
Alignment:
Q  270 ataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttat 369  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||| | |||||||| |||||  ||||| |||||||||||||||||||||||||||     
T  96637 ataaaacacatacctcggataagataatccggctgctccacttcctccgtattcaaagaaaacatttttcccgccgccttcttcggcttggtacacttag 96736  T
Q  370 tactaatatgaccattctttccacaattgtagcaagtaa 408  Q
    |||| |||||||| |||| ||||||||||||||||||||    
T  96737 tactgatatgacccttctctccacaattgtagcaagtaa 96775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 3334 - 3436
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagc 109  Q
    ||||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  3334 acatccaatccataccaaaaatcacattcatatgcttcaatggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttacc 3433  T
Q  110 aca 112  Q
    |||    
T  3434 aca 3436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 2384 - 2292
Alignment:
Q  58 acacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgt 150  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  2384 acacaagatccaactcaaaatcaacattaccaaaattaacaagacacttagcacacacaaaagaagtagtcaccgaaccactagccggggtgt 2292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 93887 - 93791
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 112  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| | |||||||||||||||| ||||    
T  93887 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactccaaatcaacattaccgaaattaacaggacacttaacaca 93791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 364 - 455
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacactta 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  364 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacttaaaatcaacattatcaaaattaacaggacactta 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 17794 - 17696
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  17794 aatccataccaaaaatcacatccatatgcttcaatggaagacacacaagattcaact-aaaatcaacattaccgaaattaacaggacacttagcacacac 17696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 54058 - 53967
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacactta 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  54058 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacttaaaatcaacattatcaaaattaacaggacactta 53967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 46529 - 46431
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 115  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||    
T  46529 aatccataccaaaa-tcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccgaaatttacaggacacttagcaaacac 46431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 929 - 997
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  929 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacat 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 3405 - 3331
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||| |||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||||    
T  3405 acatccaatccataccaaaaatcacatctatatgcttcaaccgaagacacaaaagatccaactcaaaatcaacat 3331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 11660 - 11586
Alignment:
Q  10 acatcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||| |||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||||    
T  11660 acatccaatccataccaaaaatcacatctatatgcttcaaccgaagacacaaaagatccaactcaaaatcaacat 11586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 8273 - 8199
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaa 90  Q
    |||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8273 aatccataccaaaaataaaatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaa 8199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 10826 - 10757
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaact-caaaatcaacat 84  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||    
T  10826 aatccataccaaaaatcacatccatatgctttaacggaagacaaacaagatccaactccaaaatcaacat 10757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 131 - 198
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  131 aatccataccaaaaataacatccatatgcttcaacggaagacaaacaa-atccaactcaaaatcaacat 198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 51698 - 51766
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 84  Q
    ||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||||||    
T  51698 aatccatgccaaaaatcacatccatatgcttcaacggaagataaacaagatccaattcaaaatcaacat 51766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 252 - 202
Alignment:
Q  16 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagat 66  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  252 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagat 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 15479 - 15518
Alignment:
Q  228 gtagcaccaatatcaataattgcaatcaaaggagtactat 267  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  15479 gtagcaccaatatcaataatagcaattaaaggagtactat 15518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 29992 - 30043
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  29992 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 30043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 67354 - 67303
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  67354 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 67303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 41793 - 41844
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  41793 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 41844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 39579 - 39528
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  39579 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 39528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 514599 - 514548
Alignment:
Q  217 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  514599 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 514548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 4326 - 4284
Alignment:
Q  226 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 268  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||    
T  4326 gagtagcaccagtatcaataatagcaattaaaggagtactatt 4284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 29974 - 29941
Alignment:
Q  250 caatcaaaggagtactattgataaaacacatacc 283  Q
    |||||||| |||||||||||||||||||||||||    
T  29974 caatcaaaagagtactattgataaaacacatacc 29941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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