View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7020_high_4 (Length: 577)

Name: NF7020_high_4
Description: NF7020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7020_high_4
NF7020_high_4
[»] chr2 (40 HSPs)
chr2 (15-410)||(15890443-15890834)
chr2 (442-577)||(15890276-15890411)
chr2 (110-180)||(36449707-36449777)
chr2 (100-144)||(7939993-7940037)
chr2 (93-144)||(1366405-1366456)
chr2 (61-144)||(33476517-33476600)
chr2 (61-144)||(37199560-37199643)
chr2 (103-144)||(40947462-40947503)
chr2 (100-141)||(41078158-41078199)
chr2 (61-144)||(7939357-7939440)
chr2 (105-180)||(22298255-22298330)
chr2 (103-144)||(26196237-26196278)
chr2 (100-144)||(10357120-10357164)
chr2 (100-144)||(11051589-11051633)
chr2 (100-144)||(44332382-44332426)
chr2 (101-144)||(3044958-3045001)
chr2 (61-124)||(3045559-3045622)
chr2 (93-144)||(6229877-6229928)
chr2 (105-144)||(13873990-13874029)
chr2 (105-144)||(14014115-14014154)
chr2 (93-144)||(31597255-31597306)
chr2 (93-144)||(33146065-33146116)
chr2 (93-144)||(34173706-34173757)
chr2 (100-155)||(35175642-35175696)
chr2 (93-144)||(37009652-37009703)
chr2 (106-144)||(38910705-38910743)
chr2 (100-186)||(40768822-40768908)
chr2 (100-137)||(41521667-41521704)
chr2 (100-144)||(3515472-3515516)
chr2 (108-144)||(5475141-5475177)
chr2 (104-144)||(8313686-8313726)
chr2 (100-144)||(11796170-11796214)
chr2 (96-124)||(17449771-17449799)
chr2 (100-144)||(17829081-17829125)
chr2 (100-144)||(20894280-20894324)
chr2 (100-144)||(34173076-34173120)
chr2 (106-150)||(34579649-34579693)
chr2 (106-150)||(34585398-34585442)
chr2 (100-144)||(35899168-35899212)
chr2 (105-177)||(42706890-42706962)
[»] scaffold0068 (1 HSPs)
scaffold0068 (93-180)||(59255-59342)
[»] chr8 (40 HSPs)
chr8 (93-180)||(8438560-8438647)
chr8 (93-149)||(37266135-37266191)
chr8 (61-144)||(17564701-17564784)
chr8 (93-179)||(33452316-33452403)
chr8 (93-179)||(3075959-3076045)
chr8 (100-181)||(11140090-11140171)
chr8 (100-144)||(8437930-8437974)
chr8 (100-144)||(11141061-11141105)
chr8 (100-144)||(13422066-13422110)
chr8 (100-144)||(32905327-32905371)
chr8 (61-129)||(34925366-34925434)
chr8 (104-144)||(37304896-37304936)
chr8 (100-144)||(41311703-41311747)
chr8 (93-144)||(5551586-5551637)
chr8 (105-144)||(11760072-11760111)
chr8 (93-144)||(14094143-14094194)
chr8 (93-132)||(30354520-30354559)
chr8 (101-180)||(31846444-31846523)
chr8 (61-144)||(34363944-34364026)
chr8 (61-144)||(36016721-36016803)
chr8 (93-144)||(37836952-37837003)
chr8 (93-144)||(40791079-40791130)
chr8 (93-180)||(44284343-44284430)
chr8 (106-144)||(24778021-24778059)
chr8 (103-144)||(3075339-3075380)
chr8 (99-144)||(6099475-6099520)
chr8 (63-144)||(14879553-14879634)
chr8 (100-133)||(34923885-34923918)
chr8 (100-144)||(13421474-13421518)
chr8 (100-180)||(14093478-14093558)
chr8 (100-144)||(14363808-14363852)
chr8 (100-144)||(14880188-14880232)
chr8 (100-144)||(22934322-22934366)
chr8 (106-158)||(30991373-30991425)
chr8 (100-144)||(31739542-31739586)
chr8 (100-144)||(32904219-32904263)
chr8 (108-144)||(37872303-37872339)
chr8 (100-144)||(39998403-39998447)
chr8 (100-144)||(40791755-40791799)
chr8 (100-144)||(41312380-41312424)
[»] chr6 (28 HSPs)
chr6 (93-180)||(21802597-21802684)
chr6 (93-181)||(12767599-12767687)
chr6 (98-144)||(31881871-31881917)
chr6 (100-144)||(4125907-4125951)
chr6 (93-144)||(2522699-2522750)
chr6 (100-144)||(4100545-4100589)
chr6 (100-144)||(12026197-12026241)
chr6 (100-160)||(21847369-21847429)
chr6 (100-144)||(22022274-22022318)
chr6 (100-144)||(25527760-25527804)
chr6 (105-144)||(6936405-6936444)
chr6 (98-144)||(188431-188477)
chr6 (93-131)||(15499489-15499527)
chr6 (100-144)||(7127657-7127701)
chr6 (108-144)||(7448259-7448295)
chr6 (100-144)||(10702301-10702345)
chr6 (100-144)||(11522830-11522874)
chr6 (100-144)||(12033117-12033161)
chr6 (100-180)||(12409407-12409487)
chr6 (106-158)||(12767055-12767107)
chr6 (100-144)||(14313849-14313893)
chr6 (100-144)||(16326070-16326114)
chr6 (100-144)||(16349468-16349512)
chr6 (100-144)||(21801969-21802013)
chr6 (93-149)||(31282238-31282294)
chr6 (100-144)||(32113769-32113813)
chr6 (100-140)||(33950260-33950300)
chr6 (100-144)||(34280681-34280725)
[»] scaffold0361 (1 HSPs)
scaffold0361 (100-180)||(17148-17228)
[»] chr7 (47 HSPs)
chr7 (61-142)||(22711667-22711748)
chr7 (100-144)||(5228638-5228682)
chr7 (100-144)||(12677130-12677174)
chr7 (61-144)||(19333011-19333094)
chr7 (93-144)||(20261574-20261625)
chr7 (61-144)||(40401512-40401595)
chr7 (93-144)||(48872042-48872093)
chr7 (106-180)||(42813584-42813658)
chr7 (100-144)||(10412555-10412599)
chr7 (100-144)||(27144212-27144256)
chr7 (100-144)||(29615547-29615591)
chr7 (100-144)||(29823361-29823405)
chr7 (72-132)||(33576663-33576723)
chr7 (100-144)||(33869224-33869268)
chr7 (100-144)||(34999216-34999260)
chr7 (106-189)||(20115655-20115738)
chr7 (93-144)||(28308663-28308714)
chr7 (106-169)||(29736696-29736759)
chr7 (93-144)||(31221448-31221499)
chr7 (93-144)||(38987783-38987834)
chr7 (93-144)||(46011112-46011163)
chr7 (106-176)||(4518389-4518459)
chr7 (106-144)||(40344442-40344480)
chr7 (95-144)||(1573748-1573797)
chr7 (100-181)||(22263757-22263838)
chr7 (106-183)||(38669987-38670064)
chr7 (100-144)||(25287-25331)
chr7 (100-144)||(317309-317353)
chr7 (105-181)||(3341445-3341521)
chr7 (100-144)||(6184683-6184726)
chr7 (93-133)||(8123269-8123309)
chr7 (104-144)||(8535437-8535477)
chr7 (100-144)||(11639927-11639971)
chr7 (100-144)||(12679025-12679069)
chr7 (100-144)||(13068406-13068450)
chr7 (100-144)||(14078387-14078431)
chr7 (100-144)||(14388415-14388459)
chr7 (135-187)||(20096853-20096905)
chr7 (100-144)||(25607611-25607655)
chr7 (104-144)||(27619637-27619677)
chr7 (100-144)||(30738221-30738265)
chr7 (100-144)||(30870578-30870622)
chr7 (105-185)||(31388133-31388213)
chr7 (106-158)||(32867805-32867857)
chr7 (100-144)||(32867902-32867946)
chr7 (104-144)||(40400933-40400973)
chr7 (100-144)||(48982538-48982582)
[»] chr3 (49 HSPs)
chr3 (55-144)||(49765083-49765172)
chr3 (93-180)||(44500035-44500122)
chr3 (93-144)||(1262430-1262481)
chr3 (93-144)||(18364663-18364714)
chr3 (93-144)||(30605338-30605389)
chr3 (93-144)||(54605795-54605846)
chr3 (95-144)||(11345353-11345402)
chr3 (55-144)||(40036350-40036439)
chr3 (100-144)||(18365280-18365324)
chr3 (100-160)||(22518579-22518639)
chr3 (100-144)||(32737170-32737214)
chr3 (100-144)||(45241234-45241278)
chr3 (100-180)||(49080608-49080688)
chr3 (101-144)||(2756607-2756650)
chr3 (93-144)||(3090410-3090461)
chr3 (100-183)||(5963051-5963134)
chr3 (93-180)||(9830271-9830358)
chr3 (105-180)||(11397584-11397659)
chr3 (93-144)||(17764954-17765005)
chr3 (93-144)||(19066274-19066325)
chr3 (105-144)||(27255318-27255357)
chr3 (93-144)||(41587303-41587354)
chr3 (93-144)||(53490723-53490774)
chr3 (93-144)||(54403592-54403643)
chr3 (110-144)||(25259947-25259981)
chr3 (106-180)||(33115239-33115313)
chr3 (110-144)||(33979290-33979324)
chr3 (103-144)||(4757028-4757069)
chr3 (103-144)||(16067257-16067298)
chr3 (103-144)||(19547032-19547073)
chr3 (100-144)||(291782-291826)
chr3 (100-180)||(1364051-1364131)
chr3 (100-144)||(1763676-1763720)
chr3 (100-144)||(3089783-3089827)
chr3 (100-144)||(4558065-4558109)
chr3 (106-158)||(4757117-4757169)
chr3 (100-144)||(10887743-10887787)
chr3 (100-144)||(11055824-11055868)
chr3 (106-158)||(11388975-11389027)
chr3 (106-158)||(11581989-11582041)
chr3 (100-144)||(22129720-22129764)
chr3 (100-144)||(23309619-23309663)
chr3 (100-144)||(27638508-27638552)
chr3 (100-144)||(37183111-37183155)
chr3 (100-144)||(40927526-40927570)
chr3 (100-144)||(40974069-40974113)
chr3 (93-144)||(49079992-49080041)
chr3 (100-144)||(54606423-54606467)
chr3 (108-144)||(55204968-55205004)
[»] chr5 (30 HSPs)
chr5 (100-180)||(1406235-1406315)
chr5 (106-180)||(31849999-31850073)
chr5 (100-144)||(4877374-4877418)
chr5 (100-144)||(20570159-20570203)
chr5 (103-179)||(38497324-38497400)
chr5 (93-180)||(13279474-13279561)
chr5 (100-144)||(8573348-8573392)
chr5 (100-144)||(19408570-19408614)
chr5 (100-144)||(27979899-27979943)
chr5 (104-144)||(32458516-32458556)
chr5 (100-144)||(36742581-36742625)
chr5 (100-144)||(42598987-42599031)
chr5 (93-144)||(13685999-13686050)
chr5 (93-144)||(22731052-22731103)
chr5 (93-144)||(27979262-27979313)
chr5 (93-144)||(36737441-36737492)
chr5 (100-154)||(4717272-4717326)
chr5 (93-182)||(8437735-8437825)
chr5 (98-144)||(27028638-27028684)
chr5 (93-127)||(36853666-36853700)
chr5 (112-193)||(2074726-2074807)
chr5 (100-181)||(17780340-17780421)
chr5 (100-129)||(20217239-20217268)
chr5 (106-179)||(32050598-32050671)
chr5 (108-144)||(6029485-6029521)
chr5 (100-144)||(9017678-9017722)
chr5 (93-141)||(20570192-20570240)
chr5 (104-140)||(20570831-20570867)
chr5 (100-144)||(35751547-35751591)
chr5 (100-144)||(37658074-37658118)
[»] chr4 (42 HSPs)
chr4 (93-144)||(13482214-13482265)
chr4 (98-181)||(29429697-29429780)
chr4 (95-144)||(16192310-16192359)
chr4 (93-158)||(51019668-51019733)
chr4 (93-142)||(54096708-54096757)
chr4 (93-157)||(21037316-21037380)
chr4 (100-144)||(26705669-26705713)
chr4 (93-144)||(17730173-17730224)
chr4 (93-144)||(36898092-36898143)
chr4 (101-144)||(41919909-41919952)
chr4 (93-144)||(55814990-55815041)
chr4 (103-144)||(4949965-4950006)
chr4 (95-144)||(55068874-55068923)
chr4 (107-144)||(56310073-56310110)
chr4 (100-144)||(17722781-17722825)
chr4 (100-144)||(19313376-19313420)
chr4 (104-144)||(25010061-25010101)
chr4 (100-144)||(30192540-30192584)
chr4 (100-144)||(35667283-35667327)
chr4 (100-144)||(35667566-35667610)
chr4 (100-144)||(44665185-44665229)
chr4 (100-144)||(46095437-46095481)
chr4 (100-144)||(47030482-47030526)
chr4 (93-144)||(23722044-23722095)
chr4 (61-144)||(38720580-38720663)
chr4 (102-144)||(35667758-35667800)
chr4 (102-144)||(37423811-37423853)
chr4 (98-132)||(45847765-45847799)
chr4 (107-144)||(13772389-13772426)
chr4 (107-144)||(17723426-17723463)
chr4 (100-181)||(20545018-20545099)
chr4 (103-144)||(33047232-33047273)
chr4 (100-144)||(796414-796458)
chr4 (100-144)||(6233103-6233147)
chr4 (100-144)||(7166078-7166122)
chr4 (100-144)||(8192990-8193034)
chr4 (100-144)||(10155534-10155578)
chr4 (100-144)||(13771749-13771793)
chr4 (100-144)||(16960236-16960280)
chr4 (93-149)||(16960867-16960923)
chr4 (100-144)||(37708806-37708850)
chr4 (104-144)||(51268553-51268593)
[»] chr1 (36 HSPs)
chr1 (100-147)||(794747-794794)
chr1 (101-144)||(8061056-8061099)
chr1 (93-158)||(27225692-27225757)
chr1 (100-144)||(51362486-51362530)
chr1 (93-144)||(16536402-16536453)
chr1 (93-144)||(18406560-18406611)
chr1 (61-144)||(45738030-45738113)
chr1 (103-144)||(19071742-19071783)
chr1 (103-144)||(19119632-19119673)
chr1 (100-144)||(9091067-9091111)
chr1 (100-144)||(18407201-18407245)
chr1 (100-144)||(19072358-19072402)
chr1 (100-144)||(19120248-19120292)
chr1 (100-144)||(41321543-41321587)
chr1 (100-144)||(41575842-41575886)
chr1 (100-144)||(41576011-41576055)
chr1 (100-144)||(42831201-42831245)
chr1 (61-144)||(4007583-4007666)
chr1 (93-144)||(43320570-43320621)
chr1 (61-144)||(44645291-44645374)
chr1 (93-144)||(45737335-45737386)
chr1 (93-144)||(50143415-50143466)
chr1 (106-180)||(1114888-1114962)
chr1 (100-158)||(9997998-9998056)
chr1 (106-144)||(29344551-29344589)
chr1 (100-130)||(31766002-31766032)
chr1 (100-142)||(47553169-47553211)
chr1 (103-180)||(47233717-47233794)
chr1 (100-181)||(50144051-50144132)
chr1 (100-144)||(11916481-11916525)
chr1 (108-144)||(11917126-11917162)
chr1 (93-129)||(17109350-17109386)
chr1 (100-144)||(29510478-29510522)
chr1 (100-144)||(38011853-38011897)
chr1 (100-144)||(43319946-43319990)
chr1 (104-144)||(43504462-43504502)
[»] scaffold0115 (1 HSPs)
scaffold0115 (100-144)||(31353-31397)
[»] scaffold0189 (1 HSPs)
scaffold0189 (93-144)||(11320-11371)
[»] scaffold0051 (1 HSPs)
scaffold0051 (93-144)||(11622-11673)
[»] scaffold0034 (1 HSPs)
scaffold0034 (101-180)||(25901-25980)
[»] scaffold0368 (1 HSPs)
scaffold0368 (100-144)||(11257-11301)
[»] scaffold0289 (1 HSPs)
scaffold0289 (100-144)||(3439-3483)
[»] scaffold0003 (1 HSPs)
scaffold0003 (100-144)||(421178-421222)
[»] scaffold0695 (2 HSPs)
scaffold0695 (93-144)||(2254-2305)
scaffold0695 (100-180)||(2889-2969)
[»] scaffold0340 (1 HSPs)
scaffold0340 (101-144)||(12860-12903)
[»] scaffold0043 (1 HSPs)
scaffold0043 (106-183)||(67707-67784)
[»] scaffold2113 (1 HSPs)
scaffold2113 (100-144)||(757-801)
[»] scaffold0105 (1 HSPs)
scaffold0105 (100-144)||(19646-19690)
[»] scaffold0006 (1 HSPs)
scaffold0006 (100-144)||(161288-161332)


Alignment Details
Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 15 - 410
Target Start/End: Complemental strand, 15890834 - 15890443
Alignment:
Q  15 acatcaccgtgattctgattctgagaaatatgtacataaacaagtgtcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatat 114  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  15890834 acatcactgtgattctgattcagagaaatatgtacataaacaagtgtcttatagggaaggagagtatgcattctacccttcaaaagagaggagtgtatat 15890735  T
Q  115 tttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcattttataataataatnnnnnnnntacatcctat 214  Q
    ||||||||||||| |||||  |||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||        | ||||||||    
T  15890734 tttaacataaaaggggagggaagtgtaattaaagattctcttaggggaggagagtgtaatttactcattttataataataataaaaaaaatgcatcctat 15890635  T
Q  215 tttttgaggtgttcgaattgtatcatctaaattgatgtccaagacagagaaaactcattttcaattatataatccaaaaatttcatagacatttcataag 314  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15890634 tttttgaggtgttcaaattgtatcatctaaattgatgtccaaaacagagaaaactcattttcaattatataatccaaaaatttcatggacatttcataag 15890535  T
Q  315 atggaaaaggaataagtccaataataaatccaactctcactcacacagtttccatgtagcttgtgtgtttcagttttatccacaaacttaggaact 410  Q
    |||||||||||||||||||||||| |||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890534 atggaaaaggaataagtccaataacaaatccaactc----tcacacagtttccatgtagcttgtgtgtttcagttttatccacaaacttaggaact 15890443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 442 - 577
Target Start/End: Complemental strand, 15890411 - 15890276
Alignment:
Q  442 catcatacaaaatcaatgtcagccaatcaagaaagaaaatactttctatcatcatctttggcacaaaacttcttccaaaaactaaattatcagtttcaca 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890411 catcatacaaaatcaatgtcagccaatcaagaaagaaaatactttctatcatcatctttggcacaaaacttcttccaaaaactaaattatcagtttcaca 15890312  T
Q  542 attgtagctcattattattcttatggtagctttctg 577  Q
    ||| ||||||||||||||||||||||||||||||||    
T  15890311 attatagctcattattattcttatggtagctttctg 15890276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 36449777 - 36449707
Alignment:
Q  110 tatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||||||||||||||||  ||| |||||||||| ||| |||||||||| || |||||||||||||||||    
T  36449777 tatattttaacataaaagaaaaggggagtgtaattcaagcttctcttagagaaggagagtgtaatttactc 36449707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 7939993 - 7940037
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  7939993 gaggggagtgtatattttaacataaaaggggaggagagtgtaatt 7940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 1366405 - 1366456
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  1366405 ttcaagagagggaaatgtatattttaacataagagaggaggagagtgtaatt 1366456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 33476517 - 33476600
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||| |||||||| |  ||| |||  ||||||||||||||| |||||||||||||||| |||||||  ||||||||||    
T  33476517 tcttataggggaggagagtgtaaattttacttttcaagagaggggagcgtatattttaacataagagaggagatgagtgtaatt 33476600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 37199560 - 37199643
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||| ||| ||||||  ||| |||  |||||| ||||||||||||||||||||||||| || ||||| ||||||||||    
T  37199560 tcttataggggaggggagtataaattttacttttcaagggaggggagtgtatattttaacataagaggggaggggagtgtaatt 37199643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 40947503 - 40947462
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  40947503 gggagtgtatattttaacataaaaggggaggagagtgtaatt 40947462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 41078158 - 41078199
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgta 141  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  41078158 gaggggagtgtatattttaacataagagaggaggagagtgta 41078199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 7939440 - 7939357
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||| |||||||||||  ||| |||  |||||| ||||  ||||||||||||||||||| || | ||||||||||||||    
T  7939440 tcttataggaaaggagagtataaattttacttttcaagggaggtaagtgtatattttaacataagagggaaggagagtgtaatt 7939357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 22298255 - 22298330
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||||||||||||||||| || ||||  |||||||||| ||| ||||||||||| |   |||||||||||||||    
T  22298255 gagtgtatattttaacataagaggggagaggagtgtaattcaagcttctcttagaagagaggagtgtaatttactc 22298330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 26196278 - 26196237
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  26196278 gggagtgtatattttaacataagagaggatgagagtgtaatt 26196237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 10357120 - 10357164
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  10357120 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 10357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 11051633 - 11051589
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||    
T  11051633 gaggggagtgtatattttaacataagagaggtggggagtgtaatt 11051589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 44332382 - 44332426
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||    
T  44332382 gaggggagtgtatattttaacataagaggggatgagagtgtaatt 44332426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 3045001 - 3044958
Alignment:
Q  101 aggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||| ||  |||||||||||||||    
T  3045001 aggggagtgtatattttaacataagaggtgaggagagtgtaatt 3044958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 3045559 - 3045622
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataa 124  Q
    |||||||||| ||| ||||||  ||| |||  |||||||||||| |||||||||||||||||||    
T  3045559 tcttataggggaggggagtataaattttacttttcaagagagggaagtgtatattttaacataa 3045622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 6229877 - 6229928
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || | ||| ||||||||||    
T  6229877 ttcaagggaggggagtgtatattttaacataagagggaaggggagtgtaatt 6229928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 13873990 - 13874029
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  13873990 gagtgtatattttaacataagagaggagaagagtgtaatt 13874029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 14014115 - 14014154
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  14014115 gagtgtatattttaacataagagaggagaagagtgtaatt 14014154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 31597306 - 31597255
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||| ||||||||||||||| || ||||| ||||||||||    
T  31597306 ttcaagggaggggagtttatattttaacataagaggggaggtgagtgtaatt 31597255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 33146116 - 33146065
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||| ||||    
T  33146116 ttcaagggaggggagtgtatattttaacataagaggggaggggagtgcaatt 33146065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 34173706 - 34173757
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||| ||||||||||||||||| || ||||| ||||||||||    
T  34173706 ttcaagggaggggaatgtatattttaacataagaggggaggggagtgtaatt 34173757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 35175696 - 35175642
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctct 155  Q
    ||||||||||||||||||||||||| || ||||| ||||||| |||||| ||||||    
T  35175696 gaggggagtgtatattttaacataagaggggagg-gagtgtagttaaagcttctct 35175642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 37009652 - 37009703
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||  ||||||||||    
T  37009652 ttcaagggaggggagtgtatattttaacataagaggggagaggagtgtaatt 37009703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 38910743 - 38910705
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  38910743 agtgtatattttaacataagagaggaggggagtgtaatt 38910705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 40768908 - 40768822
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcatttta 186  Q
    ||||||||||||||||||||||||||||   |||||| ||||||| |||  ||| | |||||| |  | |||||||||||| |||||    
T  40768908 gaggggagtgtatattttaacataaaaggaaaggagaatgtaattcaagcatctttgagaaaagggaaatgtaatttactcttttta 40768822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 41521667 - 41521704
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagag 137  Q
    ||||||||||||||||||||||||| || |||||||||    
T  41521667 gaggggagtgtatattttaacataagaggggaggagag 41521704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 3515472 - 3515516
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| | ||||||||    
T  3515472 gaggggagtgtatattttaacataagaggggaggggggtgtaatt 3515516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 5475141 - 5475177
Alignment:
Q  108 tgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||| || ||||||||||||||||    
T  5475141 tgtatattttaacataagaggggaggagagtgtaatt 5475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 8313726 - 8313686
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| || ||||| ||||||||||    
T  8313726 ggagtgtatattttaacataagaggggaggggagtgtaatt 8313686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 11796214 - 11796170
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||| |||||||||||| || ||||| ||||||||||    
T  11796214 gaggggagtgtacattttaacataagaggggaggggagtgtaatt 11796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 17449799 - 17449771
Alignment:
Q  96 aagagaggggagtgtatattttaacataa 124  Q
    |||||||||||||||||||||||||||||    
T  17449799 aagagaggggagtgtatattttaacataa 17449771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 17829125 - 17829081
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||  ||||||||||    
T  17829125 gaggggagtgtatattttaacataagaggggagtggagtgtaatt 17829081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 20894280 - 20894324
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  20894280 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 20894324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 34173120 - 34173076
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||||  |||||||||    
T  34173120 gaggggagtgtatattttaacataagaggggagggtagtgtaatt 34173076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 34579693 - 34579649
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagat 150  Q
    ||||||||||||||||||||||||||| | | ||||||| |||||    
T  34579693 agtgtatattttaacataaaagaggagaataatgtaatttaagat 34579649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 34585442 - 34585398
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagat 150  Q
    ||||||||||||||||||||||||||| | | ||||||| |||||    
T  34585442 agtgtatattttaacataaaagaggagaataatgtaatttaagat 34585398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 35899212 - 35899168
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  35899212 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 35899168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 42706890 - 42706962
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaattta 177  Q
    ||||| |||||||||||||| ||| ||| ||||||||||| ||| || |||||  |||||| | |||||||||    
T  42706890 gagtgcatattttaacataagagatgagaagagtgtaattcaagtttatcttacgaaaagataatgtaattta 42706962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 59342 - 59255
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||||||| |||  ||| |||||  | |||||||||||||||||    
T  59342 ttcaagggaggggagtgtatattttaacataagaggggaggagagtgtaattcaagcatcttttagaggaggagagtgtaatttactc 59255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 4e-18; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 8438560 - 8438647
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||| |||||||||||||||||||||||||| |||| ||  |||||||||| ||| ||||||||||| ||| | |||||||||||||    
T  8438560 ttcaatagaggggagtgtatattttaacataagagagaagtggagtgtaattcaagtttctcttagaagaagggggtgtaatttactc 8438647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 37266135 - 37266191
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaaga 149  Q
    |||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  37266135 ttcaagggagtggagtgtatattttaacataagaggggaggagagtgtaattaaaga 37266191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 17564784 - 17564701
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||| ||| ||||||  ||| |||  |||||| ||||||||||||||||||||||||| || |||||  |||||||||    
T  17564784 tcttataggggaggggagtataaattttacttttcaagggaggggagtgtatattttaacataagaggggagggaagtgtaatt 17564701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 33452316 - 33452403
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaa-gaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttact 179  Q
    ||||||||||  | |||||||||||||||||||| |||||| | ||||||||| | | |||||||||||||   ||||||||||||||    
T  33452316 ttcaagagagaagtgtgtatattttaacataaaaagaggagaaaagtgtaatttatgcttctcttagaaaagatgagtgtaatttact 33452403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 3075959 - 3076045
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttact 179  Q
    ||||||||||||||||||||||||||| |||| ||  |||| |||||||||| |||  ||| | |||  | ||||||||||||||||    
T  3075959 ttcaagagaggggagtgtatattttaatataagaggagaggggagtgtaattcaagcatctttgagaggaggagagtgtaatttact 3076045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 11140171 - 11140090
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactca 181  Q
    ||||||||||||||||||||||||| || ||||| |||||||||| |||  ||| |||| | | | ||||||||||| ||||    
T  11140171 gaggggagtgtatattttaacataagaggggaggggagtgtaattcaagtatcttttaggagacgggagtgtaatttgctca 11140090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 8437974 - 8437930
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||    
T  8437974 gaggggagtgtatattttaacataagagaggagtggagtgtaatt 8437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 11141061 - 11141105
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| |||||||| || |||||||    
T  11141061 gaggggagtgtatattttaacataagagaggaggggaatgtaatt 11141105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 13422066 - 13422110
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  13422066 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 13422110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 32905327 - 32905371
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| |||||||||||||||||||||  ||||||||||||||||    
T  32905327 gagggaagtgtatattttaacataaaaagggaggagagtgtaatt 32905371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 34925366 - 34925434
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagag 129  Q
    ||||||| || | |||||||| |||| |||  |||||| ||||||||||||||||||||||||| ||||    
T  34925366 tcttataagggaagagagtatacattttacttttcaagggaggggagtgtatattttaacataagagag 34925434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 37304896 - 37304936
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  37304896 ggagtctatattttaacataaaagagaaggagagtgtaatt 37304936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 41311747 - 41311703
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||    
T  41311747 gaggggaatgtatattttaacataaaaggggagtagagtgtaatt 41311703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 5551637 - 5551586
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| |||| || ||||||||||| ||||| |||||||||||||||||||    
T  5551637 ttcaagggaggagattgtatattttagcataagagaggaggagagtgtaatt 5551586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 11760072 - 11760111
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  11760072 gagtgtatattttaacataagagaggaggagaatgtaatt 11760111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 14094143 - 14094194
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| |||||||||||| |||||||||||| || ||||| ||||||||||    
T  14094143 ttcaagggaggggagtgtaaattttaacataagaggggaggggagtgtaatt 14094194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 30354520 - 30354559
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggag 132  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  30354520 ttcaagggagaggagtgtatattttaacataaaagaggag 30354559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 31846523 - 31846444
Alignment:
Q  101 aggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||||||||||||||||||||| || |||||  ||||||||| ||   ||| ||||  || |||||||||||||||||    
T  31846523 aggggagtgtatattttaacataagaggggagggaagtgtaattcaatcatcttttagggaaggagagtgtaatttactc 31846444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 34364026 - 34363944
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||| ||||||  ||| |||  |||||| ||||| | ||||||||||||||| |||| ||||| ||||||||||    
T  34364026 tcttatagggaaggggagtataaattttacttttcaagggagggaaatgtatattttaacat-aaaggggaggggagtgtaatt 34363944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 36016721 - 36016803
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| || ||||||||||  ||| |||  |||||| ||||| ||||||||||||||||||| |||||||| || |||||||    
T  36016721 tcttataagggaggagagtataaattttacttttcaagggaggg-agtgtatattttaacataagagaggaggggattgtaatt 36016803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 37837003 - 37836952
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||| ||||||||||||||||| |||| ||| ||||||||||    
T  37837003 ttcaagggaggggaatgtatattttaacataatagagaaggggagtgtaatt 37836952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 40791130 - 40791079
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||| ||||||||||||||||||| || |||||||||| |||||    
T  40791130 ttcaagggagggtagtgtatattttaacataagaggggaggagagtataatt 40791079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 44284343 - 44284430
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||| ||||  ||||||||||||||||||| || ||||| |||||||||| |||  ||||||||   | | |||||||||||||||    
T  44284343 ttcaagggaggaaagtgtatattttaacataagaggggaggggagtgtaattcaagcatctcttaggggaggggagtgtaatttactc 44284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 24778059 - 24778021
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  24778059 agtgtatattttaacataagaggggaggagagtgtaatt 24778021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 3075380 - 3075339
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||| || ||||| ||||||||||    
T  3075380 gggagtgtatattttaacataagaggggaggggagtgtaatt 3075339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 6099475 - 6099520
Alignment:
Q  99 agaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||| ||||||||||||||||| ||  |||||||||||||||    
T  6099475 agaggggattgtatattttaacataagaggagaggagagtgtaatt 6099520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 14879634 - 14879553
Alignment:
Q  63 ttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||| ||| ||||||  ||| |||  |||||| || || | ||||||||||||||||| || ||||||||||||||||    
T  14879634 ttataggggaggggagtataaattttacttttcaagggacggaaatgtatattttaacataagaggggaggagagtgtaatt 14879553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 133
Target Start/End: Complemental strand, 34923918 - 34923885
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggagg 133  Q
    ||||||||||||||||||||||||| ||||||||    
T  34923918 gaggggagtgtatattttaacataagagaggagg 34923885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 13421518 - 13421474
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| ||  || ||||||||||||    
T  13421518 gaggggagtgtatattttaacataagaggagatgagagtgtaatt 13421474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 14093558 - 14093478
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||||| ||| ||| |||  |||||||||| |||  ||| | ||   |||||||||||||||||||    
T  14093558 gaggggagtgtatattttaacttaagagatgagaggagtgtaatttaagcatctttaaggggaagagagtgtaatttactc 14093478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 14363852 - 14363808
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  14363852 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 14363808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 14880188 - 14880232
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||||||| || ||||| ||||||||||    
T  14880188 gagggaagtgtatattttaacataagaggggaggggagtgtaatt 14880232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 22934366 - 22934322
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  22934366 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 22934322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 30991373 - 30991425
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    |||||| |||||||||||| |||||||| || ||||||| ||| |||||||||    
T  30991373 agtgtagattttaacataagagaggaggggaatgtaattcaagcttctcttag 30991425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 31739586 - 31739542
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||| || |||||||||    
T  31739586 gaggggagtgtatattttaacataagaggggatgacagtgtaatt 31739542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 32904219 - 32904263
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||||||| || ||||| ||||||||||    
T  32904219 gagggaagtgtatattttaacataagaggggaggggagtgtaatt 32904263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 37872339 - 37872303
Alignment:
Q  108 tgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  37872339 tgtatattttaacataagagaggaggggagtgtaatt 37872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 39998447 - 39998403
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||| ||||||||| ||| || ||||||||||||||||    
T  39998447 gaggggagtgtgtattttaacttaagaggggaggagagtgtaatt 39998403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 40791755 - 40791799
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||  ||||||||||    
T  40791755 gaggggagtgtatattttaacataagaggggagaggagtgtaatt 40791799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 41312380 - 41312424
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| ||||||||||||||||| || ||||| ||||||||||    
T  41312380 gaggggaatgtatattttaacataagaggggaggggagtgtaatt 41312424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 21802597 - 21802684
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||||||| |||  ||| |||||  | |||||||||||||||||    
T  21802597 ttcaagggaggggagtgtatattttaacataagaggggaggagagtgtaattcaagcatcttttagaggaggagagtgtaatttactc 21802684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 12767599 - 12767687
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactca 181  Q
    |||||| ||||| ||||||||||||||||||| || ||||| |||||||||| ||| ||||||||| | | | ||||||||||||||||    
T  12767599 ttcaagggagggaagtgtatattttaacataagaggggaggggagtgtaattcaagcttctcttaggagaggggagtgtaatttactca 12767687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 31881917 - 31881871
Alignment:
Q  98 gagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  31881917 gagaggggagtgtatattttaacataaaaggggaggggagtgtaatt 31881871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 4125951 - 4125907
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||||||||||||||    
T  4125951 gaggggagtgtatattttaacataagaggggaggagagtgtaatt 4125907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 2522750 - 2522699
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| |||||||||||||||||||| |||| || ||||||||||||||||    
T  2522750 ttcaagggaggggagtgtatattttaatataagaggggaggagagtgtaatt 2522699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 4100589 - 4100545
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  4100589 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 4100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 12026197 - 12026241
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  12026197 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 12026241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 21847369 - 21847429
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaa 160  Q
    ||||| ||||||||||||||||||| || |||||||||| ||||| ||| || ||||||||    
T  21847369 gagggaagtgtatattttaacataagaggggaggagagtctaattcaagcttttcttagaa 21847429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 22022274 - 22022318
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||    
T  22022274 gaggggagtgtatattttaacataagaggggatgagagtgtaatt 22022318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 25527804 - 25527760
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||    
T  25527804 gaggggagtgtatattttaacttaagaggggaggagagtgtaatt 25527760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 6936444 - 6936405
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  6936444 gagtgtatattttaacataagaggggaggagagtgtaatt 6936405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 188431 - 188477
Alignment:
Q  98 gagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||| ||| || ||||| ||||||||||    
T  188431 gagaggggagtgtatattttaacttaagaggggaggggagtgtaatt 188477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 15499489 - 15499527
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagagga 131  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  15499489 ttcaagggaggggagtgtatattttaacataagagagga 15499527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 7127657 - 7127701
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||| |||||||| |||||| ||||| ||||||||||    
T  7127657 gaggggagtgtacattttaacttaaaaggggaggggagtgtaatt 7127701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 7448295 - 7448259
Alignment:
Q  108 tgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  7448295 tgtatattttaacataagagagaaggagagtgtaatt 7448259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 10702345 - 10702301
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||||  |||||||||    
T  10702345 gaggggagtgtatattttaacataagaggggagggaagtgtaatt 10702301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 11522874 - 11522830
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  11522874 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 11522830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 12033117 - 12033161
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  12033117 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 12033161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 12409487 - 12409407
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||| |||||||||||||||||||  || ||||| |||||| ||| ||| |||||||||   | | |||||||||||||||    
T  12409487 gaggagagtgtatattttaacataggaggggaggggagtgtgattcaagcttctcttaggggaggggagtgtaatttactc 12409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 12767107 - 12767055
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    |||||| |||||||||||| || |||||||| ||||||| ||| |||||||||    
T  12767107 agtgtaaattttaacataagaggggaggagaatgtaattcaagcttctcttag 12767055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 14313849 - 14313893
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| ||||||||||||||||| || ||||| ||||||||||    
T  14313849 gaggggattgtatattttaacataagaggggaggggagtgtaatt 14313893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 16326070 - 16326114
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| |||| || ||||| ||||||||||    
T  16326070 gaggggagtgtatattttaatataagaggggaggtgagtgtaatt 16326114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 16349468 - 16349512
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| |||| || ||||| ||||||||||    
T  16349468 gaggggagtgtatattttaatataagaggggaggtgagtgtaatt 16349512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 21802013 - 21801969
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| |  ||||| ||||||||||    
T  21802013 gaggggagtgtatattttaacataagaatggaggggagtgtaatt 21801969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 31282238 - 31282294
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaaga 149  Q
    |||||| |||||| |||||||||||||||||| ||   |||||||||||||| ||||    
T  31282238 ttcaagggaggggggtgtatattttaacataagaggataggagagtgtaattcaaga 31282294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 32113813 - 32113769
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||||  |||||||||    
T  32113813 gaggggagtgtatattttaacataagaggggagggaagtgtaatt 32113769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 33950300 - 33950260
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgt 140  Q
    |||||||||||||||||||| |||| || ||||||||||||    
T  33950300 gaggggagtgtatattttaaaataagaggggaggagagtgt 33950260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 34280681 - 34280725
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  34280681 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 34280725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 17148 - 17228
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||||||||| || ||| | |||||||||| ||| ||||||||||| | | |||||||||||||||    
T  17148 gaggggagtgtatattttaacataagaggggatgtgagtgtaattcaagcttctcttagaagaggggagtgtaatttactc 17228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 22711748 - 22711667
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaa 142  Q
    |||||||||| ||| ||||||  ||| |||  |||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  22711748 tcttataggggaggggagtataaattttacttttcaagagagtggagtgtatattttaacataagaggggaggagagtgtaa 22711667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 5228638 - 5228682
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  5228638 gaggggagtgtatattttaacataaaaggggaggagagtgtaatt 5228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 12677174 - 12677130
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||||||||||||||    
T  12677174 gaggggagtgtatattttaacataagaggggaggagagtgtaatt 12677130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 19333011 - 19333094
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||| ||| ||||||  ||| |||  ||||||| ||| |||||||||||||||| |||||||||||  ||||||||||    
T  19333011 tcttataggggaggggagtataaattttacttttcaagaaaggagagtgtatattttaacttaaaagaggagaggagtgtaatt 19333094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 20261574 - 20261625
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||||||||||    
T  20261574 ttcaagggaggggagtgtatattttaacataagaggggatgagagtgtaatt 20261625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 40401512 - 40401595
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| || ||||||||||  ||| |||  |||||| || |||||||||||||||||||||| || ||||| ||||||||||    
T  40401512 tcttataagggaggagagtataaattttacttttcaagggaagggagtgtatattttaacataagaggggaggggagtgtaatt 40401595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 48872093 - 48872042
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| |||||||| || |||||||    
T  48872093 ttcaagggaggggagtgtatattttaacataagagaggaggggaatgtaatt 48872042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 42813584 - 42813658
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||| |||||||| |||||||||| |||  ||| | ||  || |||||||||||||||||    
T  42813584 agtgtatattttaacataagagaggaggggagtgtaattcaagcatctttgagggaatgagagtgtaatttactc 42813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 10412555 - 10412599
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  10412555 gagggaagtgtatattttaacataagaggggaggagagtgtaatt 10412599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 27144256 - 27144212
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  27144256 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 27144212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 29615591 - 29615547
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| ||||||||||||||||| || ||||||||||||||||    
T  29615591 gaggggaatgtatattttaacataagaggggaggagagtgtaatt 29615547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 29823405 - 29823361
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||    
T  29823405 gaggggagtgtatattttaacttaagaggggaggagagtgtaatt 29823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 33576663 - 33576723
Alignment:
Q  72 aggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggag 132  Q
    ||||||||||  ||| |||  ||||| |||||||||||||||||||||||||| |||||||    
T  33576663 aggagagtataaattttacttttcaaaagaggggagtgtatattttaacataagagaggag 33576723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 33869268 - 33869224
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||    
T  33869268 gaggggagtgtatattttaacataagaggagaggagagtgtaatt 33869224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 34999260 - 34999216
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  34999260 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 34999216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 20115655 - 20115738
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcattttataa 189  Q
    ||||||||||| ||||||| |||  |   |||||||||| ||| |||||||||| |||| |||||||||||| ||| |||||||    
T  20115655 agtgtatatttcaacataagagaaaatatgagtgtaattcaagcttctcttagagaaagggagtgtaatttaatcaatttataa 20115738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 28308663 - 28308714
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| ||  || ||||||||||||    
T  28308663 ttcaagggaggggagtgtatattttaacataagaggagatgagagtgtaatt 28308714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 29736696 - 29736759
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagt 169  Q
    |||||| |||||||||||| || ||| |||| ||||||| ||| ||||||||||| ||||||||    
T  29736696 agtgtagattttaacataagaggggatgagaatgtaattcaagcttctcttagaagaagagagt 29736759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 31221448 - 31221499
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| |  ||||| ||||||||||    
T  31221448 ttcaagggaggggagtgtatattttaacataagaagggaggggagtgtaatt 31221499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 38987834 - 38987783
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||| ||||||||||||||||||||| || ||||| |||| |||||    
T  38987834 ttcaagagagtggagtgtatattttaacataagaggggaggggagtttaatt 38987783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 46011112 - 46011163
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| |||||||||| |||||||||||||| |||| ||| ||||||||||    
T  46011112 ttcaagggaggggagtgcatattttaacataagagagaaggggagtgtaatt 46011163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 4518459 - 4518389
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaattt 176  Q
    |||||| |||||||||| | || ||| |||| ||||||| ||| |||||||||  ||||||||||||||||    
T  4518459 agtgtagattttaacattagaggggatgagaatgtaatttaagcttctcttagggaaagagagtgtaattt 4518389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 40344442 - 40344480
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  40344442 agtgtatattttaacataagaggggaggagagtgtaatt 40344480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 1573748 - 1573797
Alignment:
Q  95 caagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||| |||| |||||||||||||||||||| || ||||| ||||||||||    
T  1573748 caagggaggtgagtgtatattttaacataagaggggaggggagtgtaatt 1573797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 22263838 - 22263757
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactca 181  Q
    ||||| ||||||||||||||||||| ||||||| ||| ||||||| |||  ||| | |||  | | ||||||||||||||||    
T  22263838 gagggaagtgtatattttaacataagagaggagaagaatgtaattcaagcatctttgagaggaggggagtgtaatttactca 22263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 38670064 - 38669987
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcatt 183  Q
    ||||||||||||||| ||| || |||||||||||||||| |||  ||| | || | | | ||||||||||||||||||    
T  38670064 agtgtatattttaacttaagaggggaggagagtgtaattcaagcatctttaaggagaggggagtgtaatttactcatt 38669987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 25331 - 25287
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  25331 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 25287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 317353 - 317309
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  317353 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 317309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 3341445 - 3341521
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactca 181  Q
    |||||||||||||||||||| ||  ||||||||||||||| |||  ||| | ||  |||  ||||||||||||||||    
T  3341445 gagtgtatattttaacataagaggagaggagagtgtaattcaagcatctttgagggaaatggagtgtaatttactca 3341521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 6184726 - 6184683
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||    
T  6184726 gaggggagtgtatattttaacttaagag-ggaggagagtgtaatt 6184683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 8123269 - 8123309
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggagg 133  Q
    |||||||||||| ||||||||||||||||||| || |||||    
T  8123269 ttcaagagagggaagtgtatattttaacataagaggggagg 8123309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 8535437 - 8535477
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| |||||||||||||||||| ||||| ||||||||||    
T  8535437 ggagtatatattttaacataaaaggggaggggagtgtaatt 8535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 11639971 - 11639927
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||| |||||||||||||||||||| || ||||| ||||||||||    
T  11639971 gaggagagtgtatattttaacataagaggggaggggagtgtaatt 11639927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 12679069 - 12679025
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| ||||||||||||||||| || |||||||||| |||||    
T  12679069 gaggggaatgtatattttaacataagaggggaggagagtataatt 12679025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 13068406 - 13068450
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| | ||||||  |||||||||    
T  13068406 gaggggagtgtatattttaacataagaaaggagggaagtgtaatt 13068450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 14078431 - 14078387
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||| |||||| |||||    
T  14078431 gaggggagtgtatattttaacataagaggggaagagagtttaatt 14078387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 14388459 - 14388415
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||| |||||| |||||    
T  14388459 gaggggagtgtatattttaacataagaggggaagagagtttaatt 14388415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 20096853 - 20096905
Alignment:
Q  135 gagtgtaattaaagattctcttagaaaaagagagtgtaatttactcattttat 187  Q
    |||||||||| ||  ||||||||||||||  |||||||||||||||| |||||    
T  20096853 gagtgtaattcaaacttctcttagaaaaatggagtgtaatttactcaatttat 20096905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 25607611 - 25607655
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  25607611 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 25607655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 27619637 - 27619677
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| || ||||| ||||||||||    
T  27619637 ggagtgtatattttaacataagaggggaggggagtgtaatt 27619677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 30738265 - 30738221
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| |||| |||||||||||| |||||| ||||||||||||    
T  30738265 gaggggaatgtaaattttaacataagagaggatgagagtgtaatt 30738221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 30870578 - 30870622
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| | |||||||| ||||||||    
T  30870578 gaggggagtgtatattttaacctaagaaaggaggagcgtgtaatt 30870622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 31388133 - 31388213
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcatttt 185  Q
    ||||||| |||||||||||| |||  || | | ||||||| ||| |||||||||  || ||||||||||||||||| ||||    
T  31388133 gagtgtagattttaacataagagaaaagaataatgtaattcaagcttctcttagggaaggagagtgtaatttactcttttt 31388213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 32867805 - 32867857
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    |||||| |||||||||||| |||||||| || ||||||| ||| |||||||||    
T  32867805 agtgtagattttaacataagagaggaggggaatgtaattcaagcttctcttag 32867857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 32867902 - 32867946
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||  ||||||||||    
T  32867902 gaggggagtgtatattttaacataagaggggagaggagtgtaatt 32867946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 40400973 - 40400933
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| || ||| ||||||||||||    
T  40400973 ggagtgtatattttaacataagaggggatgagagtgtaatt 40400933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 48982538 - 48982582
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||||  |||||||||    
T  48982538 gaggggagtgtatattttaacataagaggggagggaagtgtaatt 48982582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 49765083 - 49765172
Alignment:
Q  55 caagtgtcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| |||||||||| ||| ||||||  ||| |||| |||||| ||||||| ||||||||||||||||| || ||||| ||||||||||    
T  49765083 caagtatcttataggggaggggagtataaattttacctttcaagggaggggaatgtatattttaacataagaggggaggggagtgtaatt 49765172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 44500035 - 44500122
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||||||||| ||||||||||||||||||| || ||||| |||||||||| |||  ||| | ||  || |||||||||||||||||    
T  44500035 ttcaagagagggaagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagggaaggagagtgtaatttactc 44500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 1262481 - 1262430
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||| |||||||||||||||||||| || ||||| ||||||||||    
T  1262481 ttcaagagaggagagtgtatattttaacataagaggggaggggagtgtaatt 1262430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 18364714 - 18364663
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||||||||    
T  18364714 ttcaagggaggggagtgtatattttaacataagaggggaggggagtgtaatt 18364663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 30605338 - 30605389
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||| ||||||||||||||||||| || ||||| ||||||||||    
T  30605338 ttcaagagagggaagtgtatattttaacataagagtggaggggagtgtaatt 30605389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 54605846 - 54605795
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||||||||    
T  54605846 ttcaagggaggggagtgtatattttaacataagaggggaggggagtgtaatt 54605795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 11345353 - 11345402
Alignment:
Q  95 caagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||| ||||||||||||||||||||||||| || ||||| ||||||||||    
T  11345353 caagggaggggagtgtatattttaacataagaggggaggggagtgtaatt 11345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 40036350 - 40036439
Alignment:
Q  55 caagtgtcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| |||||||||| ||| ||||||  ||| |||  | |||| ||||||||||||||||||||||||| || ||||| || |||||||    
T  40036350 caagtatcttataggggaggggagtataaattttactttgcaagggaggggagtgtatattttaacataagaggggaggggaatgtaatt 40036439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 18365280 - 18365324
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  18365280 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 18365324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 22518579 - 22518639
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaa 160  Q
    ||||| ||||||||||||||||||| || ||||   ||||||||| |||||||||||||||    
T  22518579 gagggaagtgtatattttaacataagaggggagagaagtgtaattcaagattctcttagaa 22518639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 32737170 - 32737214
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||    
T  32737170 gaggggagtgtatattttaacttaaaaggggaggaaagtgtaatt 32737214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 45241278 - 45241234
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||    
T  45241278 gaggagagtgtatattttaacataagagaggaggggagtgtaatt 45241234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 49080608 - 49080688
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||||||||| || ||||| || ||||||| |||  ||| | |||  | |||||||||||||||||    
T  49080608 gaggggagtgtatattttaacataagaggggaggggaatgtaattcaagcatctttgagaggaggagagtgtaatttactc 49080688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 2756607 - 2756650
Alignment:
Q  101 aggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||| || ||||| ||||||||||    
T  2756607 aggggagtgtatattttaacataagaggggaggggagtgtaatt 2756650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 3090410 - 3090461
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||| ||||    
T  3090410 ttcaagggaggggagtgtatattttaacataagaggggaggggagtgcaatt 3090461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 183
Target Start/End: Complemental strand, 5963134 - 5963051
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcatt 183  Q
    ||||||||||||||||||||||||| || ||||  ||||| |||| ||| || | | ||  || ||||||||||||||||||||    
T  5963134 gaggggagtgtatattttaacataagaggggagaggagtgcaattcaagcttgtgtcagggaaggagagtgtaatttactcatt 5963051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 9830358 - 9830271
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||| ||||||||||||||||||||| ||| || ||| || ||||||||| ||| |||| ||||   ||| |||| ||||||||||    
T  9830358 ttcaagggaggggagtgtatattttaacttaagaggggatgaaagtgtaattcaagcttcttttaggggaagggagtataatttactc 9830271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 11397659 - 11397584
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||||||||||||||||| || |||||  ||||||||| ||| |||||||||   |||  ||||||||||||||    
T  11397659 gagtgtatattttaacataagaggggagggaagtgtaattcaagcttctcttaggggaaggaagtgtaatttactc 11397584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 17764954 - 17765005
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||| |||| |||||    
T  17764954 ttcaagggaggggagtgtatattttaacataagaggggaggggagtttaatt 17765005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 19066274 - 19066325
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||| |||| |||||    
T  19066274 ttcaagggaggggagtgtatattttaacataagaggggaggggagtttaatt 19066325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 27255357 - 27255318
Alignment:
Q  105 gagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  27255357 gagtgtatattttaacataagaggggaggagagtgtaatt 27255318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 41587303 - 41587354
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||  ||||||||||    
T  41587303 ttcaagggaggggagtgtatattttaacataagaggggagaggagtgtaatt 41587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 53490723 - 53490774
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| |||| ||  ||||||||||    
T  53490723 ttcaagggaggggagtgtatattttaacataagagagaagatgagtgtaatt 53490774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 54403643 - 54403592
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||| ||||||||||||||||||| || ||||| ||||||||||    
T  54403643 ttcaagggagggaagtgtatattttaacataagaggggaggggagtgtaatt 54403592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 144
Target Start/End: Original strand, 25259947 - 25259981
Alignment:
Q  110 tatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||| ||||||||||    
T  25259947 tatattttaacataaaagaggaggggagtgtaatt 25259981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 33115239 - 33115313
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||| || |||||  ||||||||| |||  ||| | |||| | |||||||||||||||||    
T  33115239 agtgtatattttaacataagaggggagggaagtgtaattcaagcatctttgagaagaggagagtgtaatttactc 33115313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 144
Target Start/End: Original strand, 33979290 - 33979324
Alignment:
Q  110 tatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||||||| |||||    
T  33979290 tatattttaacataaaagaggaggagagtataatt 33979324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 4757069 - 4757028
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||| ||| || ||||||||||||||||    
T  4757069 gggagtgtatattttaacttaagaggggaggagagtgtaatt 4757028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 16067298 - 16067257
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||| ||||||||||||||||| || ||||||||||||||||    
T  16067298 gggaatgtatattttaacataagaggggaggagagtgtaatt 16067257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 19547032 - 19547073
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||| ||||||| | |||||||||    
T  19547032 gggagtgtatattttaacataagagaggagaatagtgtaatt 19547073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 291782 - 291826
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||| ||||||| || ||||||| ||||||||    
T  291782 gaggggagtgtatatttgaacataagaggggaggagggtgtaatt 291826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 1364051 - 1364131
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||||||||| ||  || | |||||||||| ||   ||| | |||| ||| |||||||||||||||    
T  1364051 gaggggagtgtatattttaacataagaggagatgggagtgtaattcaaacatctttgagaagaagggagtgtaatttactc 1364131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 1763720 - 1763676
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||| ||||||||||||||||||||||  |||||| |||||||||    
T  1763720 gaggagagtgtatattttaacataaaaagggaggaaagtgtaatt 1763676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 3089827 - 3089783
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||||  |||||||||    
T  3089827 gaggggagtgtatattttaacataagaggggagggaagtgtaatt 3089783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 4558109 - 4558065
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  4558109 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 4558065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 4757169 - 4757117
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    |||||| |||||||||||| || |||||||| ||||||| ||| |||||||||    
T  4757169 agtgtagattttaacataagagtggaggagaatgtaattcaagcttctcttag 4757117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 10887787 - 10887743
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  10887787 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 10887743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 11055868 - 11055824
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  11055868 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 11055824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 11388975 - 11389027
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    |||||| |||||||||||| || |||||||| ||||||| ||| |||||||||    
T  11388975 agtgtagattttaacataagaggggaggagaatgtaattcaagcttctcttag 11389027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 11582041 - 11581989
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    |||||| |||||||||||| |||||||| || ||||||| ||| |||||||||    
T  11582041 agtgtagattttaacataagagaggaggggaatgtaattcaagcttctcttag 11581989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 22129764 - 22129720
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  22129764 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 22129720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 23309619 - 23309663
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||  ||| |||||||| ||||||||||    
T  23309619 gaggggagtgtatattttaagttaagagaggaggggagtgtaatt 23309663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 27638552 - 27638508
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| | ||||||||||||||||||||||||  |||||||||    
T  27638552 gaggggaatatatattttaacataaaagaggagggaagtgtaatt 27638508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 37183155 - 37183111
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  37183155 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 37183111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 40927570 - 40927526
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||||  |||||||||    
T  40927570 gaggggagtgtatattttaacataagaggggagggaagtgtaatt 40927526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 40974113 - 40974069
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| ||||||||||||||||| || ||||| ||||||||||    
T  40974113 gaggggattgtatattttaacataagaggggaggggagtgtaatt 40974069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 49080041 - 49079992
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| |||||||||  |||||||||||||| || ||||||||||||||||    
T  49080041 ttcaagggaggggagt--atattttaacataagaggggaggagagtgtaatt 49079992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 54606423 - 54606467
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| ||  |||| ||||||||||    
T  54606423 gaggggagtgtatattttaacataagaggagaggggagtgtaatt 54606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 55204968 - 55205004
Alignment:
Q  108 tgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||| | ||||||||||    
T  55204968 tgtatattttaacataaaagaggatgtgagtgtaatt 55205004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 1406235 - 1406315
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||| |||||||||||||||||||| ||  || |||||||||||| ||| |||||||||| || | |||||||||||||||    
T  1406235 gaggagagtgtatattttaacataagaggagatgagagtgtaattcaagcttctcttagagaaggggagtgtaatttactc 1406315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 31850073 - 31849999
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||| |||||| |||||||||||| |||  |||||||||  | | |||||||||||||||    
T  31850073 agtgtatattttaacataagagaggatgagagtgtaattcaagcatctcttagacgaggggagtgtaatttactc 31849999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 4877374 - 4877418
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||||||||||||||    
T  4877374 gaggggagtgtatattttaacataagaggggaggagagtgtaatt 4877418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 20570203 - 20570159
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  20570203 gaggggagtgtatattttaacataagagaggaggggagtgtaatt 20570159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 38497400 - 38497324
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttact 179  Q
    |||| ||||||||||||||||| || |||| ||||||||||| ||| ||||||||||  | | ||||||||||||||    
T  38497400 gggaatgtatattttaacataagaggggagaagagtgtaattcaagcttctcttagaggaggggagtgtaatttact 38497324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 13279561 - 13279474
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||| |||| || |||| |||||||||||| ||||||||  ||||||||| ||| ||||||||||  | | |||||||||||||||    
T  13279561 ttcaagggaggagaatgtagattttaacataagagaggagggaagtgtaattcaagcttctcttagaggaggggagtgtaatttactc 13279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 8573348 - 8573392
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || | ||||||||||||||    
T  8573348 gaggggagtgtatattttaacataagagggaaggagagtgtaatt 8573392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 19408614 - 19408570
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  19408614 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 19408570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 27979899 - 27979943
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||    
T  27979899 gaggggagtgtatattttaacataagagatgaggagggtgtaatt 27979943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 32458516 - 32458556
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  32458516 ggagtgtatattttaatataaaaggggaggagagtgtaatt 32458556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 36742581 - 36742625
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  36742581 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 36742625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 42598987 - 42599031
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  42598987 gagggaagtgtatattttaacataagagtggaggagagtgtaatt 42599031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 13686050 - 13685999
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| ||| |||||||||||||||||||| || ||| ||||||||||||    
T  13686050 ttcaagaaaggagagtgtatattttaacataagaggggatgagagtgtaatt 13685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 22731052 - 22731103
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| |||||||||||||||||||||||||| |  ||||| ||||||||||    
T  22731052 ttcaaaagaggggagtgtatattttaacataagaagggaggggagtgtaatt 22731103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 27979313 - 27979262
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||| ||||||||||||||||| || ||||| ||||||||||    
T  27979313 ttcaagggaggggaatgtatattttaacataagaggggaggggagtgtaatt 27979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 36737441 - 36737492
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||| ||||||||||||||||||| || ||||| ||||||||||    
T  36737441 ttcaagggagggaagtgtatattttaacataagaggggaggggagtgtaatt 36737492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 4717272 - 4717326
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctc 154  Q
    ||||||||||||||||||||||||| |  ||| |||||||||||| ||| |||||    
T  4717272 gaggggagtgtatattttaacataagaagggatgagagtgtaattcaagcttctc 4717326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 8437825 - 8437735
Alignment:
Q  93 ttcaagagagggga-gtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcat 182  Q
    |||||||||||||| || ||||||||||||||| |   ||||  ||||||||| ||| || |||||  | |||||||||||||||||||||    
T  8437825 ttcaagagaggggaagtatatattttaacataagaagtgagggaagtgtaatttaagcttttcttaagagaagagagtgtaatttactcat 8437735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 27028638 - 27028684
Alignment:
Q  98 gagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||| ||||||||||||||| |||||||| ||||||||||    
T  27028638 gagagaggagtatatattttaacataagagaggaggggagtgtaatt 27028684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 127
Target Start/End: Complemental strand, 36853700 - 36853666
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaag 127  Q
    |||||| ||||||||||||||||||||||||||||    
T  36853700 ttcaagggaggggagtgtatattttaacataaaag 36853666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 2074726 - 2074807
Alignment:
Q  112 tattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcattttataataat 193  Q
    ||||||||||||| || ||||| |||||||||| ||| |||||||||  || | |||| |||||||||| ||  ||||||||    
T  2074726 tattttaacataagaggggaggggagtgtaattcaagtttctcttagggaaggggagtataatttactctttaaataataat 2074807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 17780421 - 17780340
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactca 181  Q
    |||| |||||||||||||||||||| |||||||   ||||||||| |||  ||| | |||  |||| |||||||||||||||    
T  17780421 gaggagagtgtatattttaacataagagaggagagtagtgtaattcaagcatctttgagaggaagaaagtgtaatttactca 17780340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 129
Target Start/End: Original strand, 20217239 - 20217268
Alignment:
Q  100 gaggggagtgtatattttaacataaaagag 129  Q
    ||||||||||||||||||||||||||||||    
T  20217239 gaggggagtgtatattttaacataaaagag 20217268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 32050671 - 32050598
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttact 179  Q
    |||||| |||||||||||| |||| | |||||||||||| |||  ||| | |||||| | ||||||||||||||    
T  32050671 agtgtacattttaacataagagagaatgagagtgtaattcaagcatctttgagaaaacgggagtgtaatttact 32050598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 6029521 - 6029485
Alignment:
Q  108 tgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  6029521 tgtatattttaacataagagaggatgagagtgtaatt 6029485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 9017722 - 9017678
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||||||| || ||||| ||||||||||    
T  9017722 gagggaagtgtatattttaacataagaggggaggggagtgtaatt 9017678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 20570240 - 20570192
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgta 141  Q
    |||||| ||||||| ||||||||||||||||| || ||||| |||||||    
T  20570240 ttcaagggaggggaatgtatattttaacataagaggggaggggagtgta 20570192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 20570831 - 20570867
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgt 140  Q
    ||||||||||||||||||||| || ||||||||||||    
T  20570831 ggagtgtatattttaacataagaggggaggagagtgt 20570867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 35751591 - 35751547
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||| | ||||||||||    
T  35751591 gaggggagtgtatattttaacataagaggggaagggagtgtaatt 35751547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 37658074 - 37658118
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  37658074 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 37658118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 13482265 - 13482214
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  13482265 ttcaagggaggggagtgtatattttaacataagaggggaggagagtgtaatt 13482214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 29429697 - 29429780
Alignment:
Q  98 gagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactca 181  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||||| |||  ||||||||  || | ||||| ||||||||||    
T  29429697 gagagggaagtgtatattttaacataagagagaaggagagtgtaattcaagcatctcttagggaaggggagtgcaatttactca 29429780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 16192310 - 16192359
Alignment:
Q  95 caagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  16192310 caagtgaggggagtgtatattttaacataagagaggaggggagtgtaatt 16192359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 51019733 - 51019668
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    |||||| ||||| ||||||||||||||||||| || |||||||||||||||| |||  ||||||||    
T  51019733 ttcaagggagggaagtgtatattttaacataagaggggaggagagtgtaattcaagcatctcttag 51019668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 54096708 - 54096757
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaa 142  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  54096708 ttcaagggatgggagtgtatattttaacataaaaggggaggagagtgtaa 54096757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 21037380 - 21037316
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctctta 157  Q
    |||||| ||||  ||||||||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  21037380 ttcaagggaggaaagtgtatattttaacataagagaggaggggagtgtaattcaagcttctctta 21037316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 26705669 - 26705713
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  26705669 gaggggagtgtatattttaacataagagaggaggggagtgtaatt 26705713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 17730173 - 17730224
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||| ||||||||||||||||||||||  |||||||||||||||    
T  17730173 ttcaagggagggtagtgtatattttaacataaaaggagaggagagtgtaatt 17730224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 36898092 - 36898143
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||||||  |||| ||||||||||    
T  36898092 ttcaagggaggggagtgtatattttaacataaaaggagaggggagtgtaatt 36898143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 41919909 - 41919952
Alignment:
Q  101 aggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  41919909 aggggagtgtatattttaacataagagaggagaagagtgtaatt 41919952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 55814990 - 55815041
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||| ||||||||||||||||| ||| |||||||||||||||||||    
T  55814990 ttcaagggagaggagtgtatattttaacgtaagagaggaggagagtgtaatt 55815041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 4950006 - 4949965
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  4950006 gggagtgtatattttaacataagagaggaggggagtgtaatt 4949965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 55068923 - 55068874
Alignment:
Q  95 caagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||| ||||||||||||||||||||||||| || ||||| ||||||||||    
T  55068923 caagggaggggagtgtatattttaacataagaggggaggggagtgtaatt 55068874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 56310073 - 56310110
Alignment:
Q  107 gtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||| |||||||||||||||||||    
T  56310073 gtgtatattttaacataagagaggaggagagtgtaatt 56310110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 17722825 - 17722781
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  17722825 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 17722781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 19313420 - 19313376
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||    
T  19313420 gaggggagtgtatattttaacataagaggggatgagagtgtaatt 19313376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 25010061 - 25010101
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  25010061 ggagtgtatattttaacataagaggggaggagagtgtaatt 25010101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 30192584 - 30192540
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  30192584 gagggaagtgtatattttaacataagaggggaggagagtgtaatt 30192540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 35667283 - 35667327
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  35667283 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 35667327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 35667566 - 35667610
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||||| |||||||||    
T  35667566 gaggggagtgtatattttaacataagaggggaggaaagtgtaatt 35667610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 44665185 - 44665229
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||    
T  44665185 gaggggagtgtatattttaacataaaaggggaggggagcgtaatt 44665229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 46095481 - 46095437
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||    
T  46095481 gaggggagtgtatattttaacttaagaggggaggagagtgtaatt 46095437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 47030482 - 47030526
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||    
T  47030482 gaggggagtgtatattttaacttaagaggggaggagagtgtaatt 47030526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 23722044 - 23722095
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||| ||||||||||||||||||| || ||||| ||||||||||    
T  23722044 ttcaagggagggtagtgtatattttaacataagaggggaggggagtgtaatt 23722095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 38720580 - 38720663
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||| |||| |  ||| |||  | |||| ||||  ||||||||||||||||||| |||||| ||||||||||||    
T  38720580 tcttatagggaaggggagtgtagattttactttacaagggaggaaagtgtatattttaacataagagaggatgagagtgtaatt 38720663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 35667758 - 35667800
Alignment:
Q  102 ggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||| || ||||| ||||||||||    
T  35667758 ggggagtgtatattttaacataagaggggaggggagtgtaatt 35667800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 37423853 - 37423811
Alignment:
Q  102 ggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||| || ||||| ||||||||||    
T  37423853 ggggagtgtatattttaacataagaggggaggggagtgtaatt 37423811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 45847765 - 45847799
Alignment:
Q  98 gagaggggagtgtatattttaacataaaagaggag 132  Q
    ||||||||||||||||||||||||||| |||||||    
T  45847765 gagaggggagtgtatattttaacataagagaggag 45847799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 13772389 - 13772426
Alignment:
Q  107 gtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  13772389 gtgtatattttaacataagagaggatgagagtgtaatt 13772426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 17723426 - 17723463
Alignment:
Q  107 gtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  17723426 gtgtatattttaacataaaaggggaggggagtgtaatt 17723463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 20545018 - 20545099
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactca 181  Q
    ||||||| ||||||||||||||||| || ||||| |||||||||| |||  ||||| ||   | | ||||||||||||||||    
T  20545018 gaggggaatgtatattttaacataagaggggaggggagtgtaattcaagcatctctgaggggaggggagtgtaatttactca 20545099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 33047232 - 33047273
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||| || ||||| ||||||||||    
T  33047232 gggagtgtatattttaacataagaggggaggggagtgtaatt 33047273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 796458 - 796414
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  796458 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 796414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 6233103 - 6233147
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  6233103 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 6233147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 7166078 - 7166122
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||||    
T  7166078 gaggggagtgtatattttaacttaagagaggagggaagtgtaatt 7166122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 8192990 - 8193034
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  8192990 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 8193034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 10155578 - 10155534
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||    
T  10155578 gagggaagtgtatattttaacttaaaaagggaggagagtgtaatt 10155534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 13771793 - 13771749
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||| || |||||||||    
T  13771793 gaggggagtgtatattttaacataagaggggatgaaagtgtaatt 13771749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 16960280 - 16960236
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||||  |||||||||    
T  16960280 gaggggagtgtatattttaacataagaggggagggaagtgtaatt 16960236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 16960867 - 16960923
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaaga 149  Q
    |||||||||| ||||||||||||||||||||| ||  |||| |||| ||||| ||||    
T  16960867 ttcaagagagaggagtgtatattttaacataagaggagaggggagtataattcaaga 16960923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 37708850 - 37708806
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||  ||||||||||    
T  37708850 gaggggagtgtatattttaacataagaggggagaggagtgtaatt 37708806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 51268553 - 51268593
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| |||||||  ||||||||||    
T  51268553 ggagtgtatattttaacataagagaggagaggagtgtaatt 51268593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 794747 - 794794
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaa 147  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||    
T  794747 gaggggagtgtatattttaacataagaggggaggagagtgtaattaaa 794794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 8061099 - 8061056
Alignment:
Q  101 aggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8061099 aggggagtgtatattttaacataagagaggaggagagtgtaatt 8061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 27225757 - 27225692
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    |||||| ||||| ||||||||||||||||||| || |||||||||||||||| |||  ||||||||    
T  27225757 ttcaagggagggaagtgtatattttaacataagaggggaggagagtgtaattcaagcatctcttag 27225692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 51362486 - 51362530
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||||||| |||||| |||||||||    
T  51362486 gaggggagtgtatattttaacataaaaggggaggaaagtgtaatt 51362530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 16536453 - 16536402
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||||||||    
T  16536453 ttcaagggaggggagtgtatattttaacataagaggggaggggagtgtaatt 16536402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 18406611 - 18406560
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||| ||||||||||||||||||| |||||||| ||||||||||    
T  18406611 ttcaagggagggtagtgtatattttaacataagagaggaggggagtgtaatt 18406560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 45738113 - 45738030
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||| ||| ||||||  ||| |||  || ||| ||||| ||||||||||||||||||| || ||||||||||||||||    
T  45738113 tcttataggggaggggagtataaattttactttttaagggagggaagtgtatattttaacataagaggggaggagagtgtaatt 45738030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 19071783 - 19071742
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  19071783 gggagtgtatattttaacataagaggggaggagagtgtaatt 19071742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 19119673 - 19119632
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  19119673 gggagtgtatattttaacataagaggggaggagagtgtaatt 19119632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 9091111 - 9091067
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||||||| ||||| || |||||||    
T  9091111 gaggggagtgtatattttaacataaaaggggaggggaatgtaatt 9091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 18407201 - 18407245
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| ||||||||||||||||| || ||||||||||||||||    
T  18407201 gaggggaatgtatattttaacataagaggggaggagagtgtaatt 18407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 19072358 - 19072402
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||    
T  19072358 gaggggagtgtatattttaatataagagaggaggggagtgtaatt 19072402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 19120248 - 19120292
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||    
T  19120248 gaggggagtgtatattttaatataagagaggaggggagtgtaatt 19120292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 41321587 - 41321543
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||    
T  41321587 gaggggagtgtatattttaacttaagaggggaggagagtgtaatt 41321543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 41575842 - 41575886
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  41575842 gagggaagtgtatattttaacataagaggggaggagagtgtaatt 41575886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 41576011 - 41576055
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| |||||||||||||||||||||||||||| || |||||||    
T  41576011 gagggaagtgtatattttaacataaaagaggaggggaatgtaatt 41576055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 42831201 - 42831245
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  42831201 gaggggagtgtatattttaacataagagcggaggggagtgtaatt 42831245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 4007666 - 4007583
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||  ||||||  ||| |||  |||||  ||| || |||||||||||||||||| || ||||||||||||||||    
T  4007666 tcttatagggaagaggagtataaattttacttttcaaaggagaggggtgtatattttaacataagaggggaggagagtgtaatt 4007583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 43320570 - 43320621
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||| ||| |||||||||||||||||| ||||| ||||||||||    
T  43320570 ttcaagggagggaagtctatattttaacataaaaggggaggggagtgtaatt 43320621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 44645374 - 44645291
Alignment:
Q  61 tcttatagggaaggagagtatgcattctacccttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||| |||| |  ||| |||  | |||| ||||  ||||||||||||||||||| |||||| ||||||||||||    
T  44645374 tcttatagggaaggggagtgtagattttactttacaagggaggaaagtgtatattttaacataagagaggatgagagtgtaatt 44645291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 45737386 - 45737335
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| |||| |||||||||||||||||||| || ||||| ||||||||||    
T  45737386 ttcaagggaggagagtgtatattttaacataagaggggaggggagtgtaatt 45737335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 50143466 - 50143415
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||| ||||||||||||||||| || ||||| ||||||||||    
T  50143466 ttcaagggaggggaatgtatattttaacataagaggggaggggagtgtaatt 50143415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 1114888 - 1114962
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||| || ||||| |||||||||| ||   |||||||||| |||  ||| ||||||||||    
T  1114888 agtgtatattttaacataagaggggaggggagtgtaattcaaacatctcttagaagaaggtagtataatttactc 1114962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 9997998 - 9998056
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttag 158  Q
    ||||||||||||||||||||||||| || |||||  || |||||| ||| |||||||||    
T  9997998 gaggggagtgtatattttaacataagaggggagggaagggtaattcaagcttctcttag 9998056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 29344589 - 29344551
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  29344589 agtgtatattttaacataagaggggaggagagtgtaatt 29344551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 130
Target Start/End: Original strand, 31766002 - 31766032
Alignment:
Q  100 gaggggagtgtatattttaacataaaagagg 130  Q
    |||||||||||||||||||||||||||||||    
T  31766002 gaggggagtgtatattttaacataaaagagg 31766032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 47553211 - 47553169
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaa 142  Q
    ||||||| ||||||||||||||||| || ||||||||||||||    
T  47553211 gaggggaatgtatattttaacataagaggggaggagagtgtaa 47553169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 47233717 - 47233794
Alignment:
Q  103 gggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||| ||||||||||||||||| |||| ||| || ||||||| |||  ||||||| ||||   |||||||||||||||    
T  47233717 gggaatgtatattttaacataagagagaaggggaatgtaattcaagcatctcttaaaaaagtggagtgtaatttactc 47233794  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 50144051 - 50144132
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactca 181  Q
    |||| |||||||||||||||||||| || ||| |||||||||||| |||  ||| | ||   | ||||||||||||||||||    
T  50144051 gaggagagtgtatattttaacataagaggggatgagagtgtaattcaagtatctttgaggggaggagagtgtaatttactca 50144132  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 11916525 - 11916481
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||| ||||||||||||||||||| | |||||| ||||||||||    
T  11916525 gagggaagtgtatattttaacataataaaggaggggagtgtaatt 11916481  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 11917126 - 11917162
Alignment:
Q  108 tgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||| || |||||||||||||||||    
T  11917126 tgtatattttaacatagaataggaggagagtgtaatt 11917162  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 17109386 - 17109350
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagag 129  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  17109386 ttcaagggaggggagtgtatattttaacataagagag 17109350  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 29510478 - 29510522
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || | ||| ||||||||||    
T  29510478 gaggggagtgtatattttaacataagagggaaggggagtgtaatt 29510522  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 38011853 - 38011897
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  38011853 gaggggagtgtatattttaacttaagagtggaggggagtgtaatt 38011897  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 43319990 - 43319946
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||| ||||||||||||||||||||  |||| ||||||||||    
T  43319990 gaggggaatgtatattttaacataaaaggagaggggagtgtaatt 43319946  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 43504462 - 43504502
Alignment:
Q  104 ggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| || |||||||||| |||||    
T  43504462 ggagtgtatattttaacataagaggggaggagagtataatt 43504502  T

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Target: scaffold0115 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 31353 - 31397
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||||||||||||||||||||||||| |||||| |||||||||    
T  31353 gaggggagtgtatattttaacataaaaggggaggaaagtgtaatt 31397  T

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Target: scaffold0189 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 11371 - 11320
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||||||||||| || |||||| |||||||||    
T  11371 ttcaagggaggggagtgtatattttaacataagaggggaggaaagtgtaatt 11320  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 11622 - 11673
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| |||||||||| || ||||| ||||||||||    
T  11622 ttcaagagaggggagtgtataatttaacataagaggggaggtgagtgtaatt 11673  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 25980 - 25901
Alignment:
Q  101 aggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    |||||||||||||||||||||||| |   ||| ||||||||||| ||| ||||||||| | | | |||||||||||||||    
T  25980 aggggagtgtatattttaacataagatgagagtagagtgtaattcaagcttctcttaggagaggggagtgtaatttactc 25901  T

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Target: scaffold0368 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 11257 - 11301
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  11257 gaggggagtgtatattttaacataagagcggaggggagtgtaatt 11301  T

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Target: scaffold0289 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 3483 - 3439
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||    
T  3483 gaggggagtgtatattttaacataagaggggaggagtgtgtaatt 3439  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 421222 - 421178
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  421222 gaggggagtgtatattttaacataagaggggaggggagtgtaatt 421178  T

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Target: scaffold0695 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 2305 - 2254
Alignment:
Q  93 ttcaagagaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| |||||||||||| |||||||||||| || ||||| ||||||||||    
T  2305 ttcaagggaggggagtgtaaattttaacataagaggggaggggagtgtaatt 2254  T

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Target: scaffold0695; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 2889 - 2969
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactc 180  Q
    ||||||||||||||||||||| ||| ||| |||  |||||||||| |||  ||| | ||   |||||||||||||||||||    
T  2889 gaggggagtgtatattttaacttaagagatgagaggagtgtaatttaagcatctttaaggggaagagagtgtaatttactc 2969  T

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Target: scaffold0340 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 12860 - 12903
Alignment:
Q  101 aggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||    
T  12860 aggggaatgtatattttaacataagagaggaagagagtgtaatt 12903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 67784 - 67707
Alignment:
Q  106 agtgtatattttaacataaaagaggaggagagtgtaattaaagattctcttagaaaaagagagtgtaatttactcatt 183  Q
    ||||||||||||| ||||| || ||||| |||||||||| | | |||||||||  || | ||||||||||| ||||||    
T  67784 agtgtatattttatcataagaggggaggggagtgtaattcatgtttctcttagggaaggggagtgtaattttctcatt 67707  T

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Target: scaffold2113 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 801 - 757
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  801 gaggggagtgtatattttaacttaagagtggaggggagtgtaatt 757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 19646 - 19690
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  19646 gaggggagtgtatattttaacttaagaggggaggggagtgtaatt 19690  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 161332 - 161288
Alignment:
Q  100 gaggggagtgtatattttaacataaaagaggaggagagtgtaatt 144  Q
    ||||||||||||||||||||||||| || |||| | |||||||||    
T  161332 gaggggagtgtatattttaacataagaggggagaaaagtgtaatt 161288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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