View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7020_low_2 (Length: 655)

Name: NF7020_low_2
Description: NF7020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7020_low_2
NF7020_low_2
[»] chr4 (40 HSPs)
chr4 (18-620)||(49635101-49635699)
chr4 (168-291)||(16556447-16556570)
chr4 (168-293)||(40406936-40407062)
chr4 (168-296)||(51974738-51974866)
chr4 (168-294)||(46283115-46283241)
chr4 (169-296)||(2832048-2832175)
chr4 (203-294)||(23448966-23449057)
chr4 (168-294)||(50815700-50815826)
chr4 (168-291)||(36993037-36993160)
chr4 (168-290)||(45847902-45848024)
chr4 (168-290)||(48404113-48404235)
chr4 (168-290)||(51707117-51707238)
chr4 (189-278)||(22096388-22096477)
chr4 (206-295)||(27862845-27862934)
chr4 (168-277)||(45355694-45355802)
chr4 (168-277)||(45369435-45369543)
chr4 (168-283)||(11491195-11491310)
chr4 (168-291)||(22341838-22341961)
chr4 (168-294)||(37574266-37574391)
chr4 (188-291)||(43362164-43362267)
chr4 (245-295)||(8716443-8716493)
chr4 (179-294)||(13210146-13210266)
chr4 (169-277)||(25234835-25234943)
chr4 (168-291)||(26885376-26885499)
chr4 (168-275)||(42154578-42154685)
chr4 (171-293)||(38690660-38690782)
chr4 (169-238)||(37889583-37889652)
chr4 (171-277)||(8716564-8716667)
chr4 (240-291)||(39387474-39387525)
chr4 (188-274)||(24570223-24570309)
chr4 (169-290)||(35909005-35909127)
chr4 (245-294)||(41971352-41971401)
chr4 (256-296)||(34974693-34974733)
chr4 (245-277)||(52366217-52366249)
chr4 (168-298)||(25104316-25104446)
chr4 (178-263)||(23233935-23234020)
chr4 (247-296)||(31261759-31261808)
chr4 (207-243)||(4153218-4153254)
chr4 (224-264)||(6087770-6087810)
chr4 (168-216)||(49811384-49811432)
[»] chr1 (46 HSPs)
chr1 (168-294)||(34702289-34702415)
chr1 (184-294)||(50011500-50011610)
chr1 (168-293)||(24134600-24134725)
chr1 (168-296)||(43109214-43109342)
chr1 (168-291)||(47651868-47651990)
chr1 (168-294)||(49619965-49620091)
chr1 (168-291)||(47428871-47428994)
chr1 (168-294)||(15417793-15417919)
chr1 (168-296)||(2017661-2017788)
chr1 (168-294)||(27054683-27054815)
chr1 (189-296)||(8893851-8893958)
chr1 (171-298)||(50064999-50065126)
chr1 (168-296)||(12973254-12973382)
chr1 (168-294)||(25800309-25800435)
chr1 (168-294)||(40061436-40061562)
chr1 (168-291)||(7438617-7438740)
chr1 (168-290)||(10123029-10123150)
chr1 (168-277)||(14262697-14262806)
chr1 (171-297)||(25421844-25421971)
chr1 (168-291)||(48497189-48497312)
chr1 (168-278)||(25031473-25031583)
chr1 (179-289)||(50302838-50302948)
chr1 (247-294)||(35527390-35527437)
chr1 (189-291)||(12148570-12148672)
chr1 (168-286)||(19424047-19424165)
chr1 (224-294)||(22386268-22386338)
chr1 (168-276)||(3347679-3347787)
chr1 (229-293)||(25585343-25585407)
chr1 (245-296)||(39304256-39304307)
chr1 (168-277)||(30735838-30735947)
chr1 (168-273)||(47683667-47683770)
chr1 (179-275)||(42937216-42937312)
chr1 (247-294)||(15550879-15550926)
chr1 (247-294)||(48813727-48813774)
chr1 (169-268)||(52720703-52720802)
chr1 (168-294)||(4126892-4127018)
chr1 (189-294)||(24253640-24253745)
chr1 (178-235)||(43196372-43196429)
chr1 (169-213)||(30325020-30325064)
chr1 (168-216)||(49239823-49239871)
chr1 (189-277)||(52164368-52164456)
chr1 (168-291)||(23368708-23368831)
chr1 (168-218)||(15550938-15550988)
chr1 (206-268)||(29917570-29917632)
chr1 (168-240)||(2350351-2350423)
chr1 (168-268)||(42946443-42946543)
[»] chr3 (39 HSPs)
chr3 (168-296)||(33528181-33528309)
chr3 (168-292)||(47864631-47864755)
chr3 (168-291)||(39739270-39739393)
chr3 (174-294)||(2259150-2259269)
chr3 (168-295)||(16141329-16141456)
chr3 (189-300)||(29226313-29226424)
chr3 (168-294)||(46247253-46247381)
chr3 (168-295)||(166780-166907)
chr3 (168-295)||(11483605-11483732)
chr3 (168-294)||(30162650-30162780)
chr3 (168-282)||(22602179-22602293)
chr3 (165-277)||(27471514-27471626)
chr3 (168-293)||(25165434-25165563)
chr3 (168-271)||(31435477-31435580)
chr3 (168-295)||(50381706-50381833)
chr3 (168-294)||(32421341-32421467)
chr3 (168-294)||(55426107-55426229)
chr3 (168-282)||(33780308-33780423)
chr3 (168-282)||(9320935-9321049)
chr3 (168-294)||(27817044-27817169)
chr3 (168-294)||(46798575-46798701)
chr3 (168-277)||(38668138-38668247)
chr3 (169-277)||(33830345-33830453)
chr3 (239-295)||(34225187-34225243)
chr3 (167-298)||(50271719-50271849)
chr3 (165-294)||(1084008-1084130)
chr3 (168-254)||(29645803-29645889)
chr3 (207-277)||(31419593-31419663)
chr3 (179-294)||(36590383-36590503)
chr3 (179-296)||(985906-986023)
chr3 (168-275)||(1325307-1325415)
chr3 (168-264)||(44062018-44062113)
chr3 (247-298)||(7239795-7239846)
chr3 (168-293)||(7517934-7518059)
chr3 (168-273)||(27394522-27394626)
chr3 (207-269)||(37756428-37756490)
chr3 (245-294)||(8258145-8258194)
chr3 (245-294)||(42913448-42913497)
chr3 (225-293)||(17218486-17218553)
[»] chr7 (34 HSPs)
chr7 (168-294)||(48433686-48433812)
chr7 (168-290)||(12166079-12166201)
chr7 (168-295)||(38378211-38378338)
chr7 (183-295)||(40273813-40273925)
chr7 (169-296)||(23824569-23824695)
chr7 (168-298)||(3961384-3961514)
chr7 (168-274)||(4956068-4956174)
chr7 (168-294)||(31793461-31793587)
chr7 (179-293)||(43440683-43440797)
chr7 (183-294)||(24029978-24030089)
chr7 (179-294)||(36528206-36528321)
chr7 (179-290)||(42554631-42554742)
chr7 (168-294)||(33248778-33248904)
chr7 (168-291)||(27454007-27454131)
chr7 (170-277)||(48619807-48619913)
chr7 (169-294)||(15025149-15025274)
chr7 (169-294)||(26455982-26456107)
chr7 (224-295)||(1575686-1575757)
chr7 (168-295)||(46266660-46266787)
chr7 (225-294)||(3902307-3902375)
chr7 (168-272)||(28914853-28914958)
chr7 (232-293)||(42338287-42338348)
chr7 (192-297)||(44986584-44986689)
chr7 (203-283)||(24315364-24315444)
chr7 (183-295)||(34322015-34322127)
chr7 (168-283)||(23602278-23602393)
chr7 (179-294)||(37665737-37665852)
chr7 (241-288)||(41468835-41468882)
chr7 (168-254)||(42841757-42841843)
chr7 (203-268)||(35661156-35661221)
chr7 (207-294)||(14707286-14707372)
chr7 (189-294)||(25775610-25775715)
chr7 (168-273)||(48525591-48525696)
chr7 (191-235)||(31662313-31662357)
[»] chr6 (21 HSPs)
chr6 (168-294)||(29321952-29322078)
chr6 (168-295)||(6228236-6228363)
chr6 (168-294)||(18903343-18903469)
chr6 (179-288)||(24794882-24794991)
chr6 (168-293)||(20415538-20415663)
chr6 (171-274)||(7954901-7955004)
chr6 (168-298)||(4854282-4854412)
chr6 (168-294)||(15716984-15717115)
chr6 (168-292)||(17216953-17217077)
chr6 (168-283)||(19748103-19748217)
chr6 (168-290)||(25045737-25045863)
chr6 (168-298)||(11552860-11552990)
chr6 (190-296)||(18618538-18618643)
chr6 (203-277)||(21874232-21874306)
chr6 (168-291)||(1128392-1128518)
chr6 (168-291)||(30422084-30422207)
chr6 (168-275)||(31703704-31703811)
chr6 (189-277)||(9357166-9357254)
chr6 (190-269)||(7929072-7929151)
chr6 (179-277)||(19221710-19221808)
chr6 (245-291)||(11611354-11611401)
[»] chr8 (37 HSPs)
chr8 (180-293)||(1032564-1032677)
chr8 (168-296)||(38289211-38289339)
chr8 (168-295)||(44828408-44828536)
chr8 (168-295)||(4259851-4259978)
chr8 (181-296)||(41454816-41454931)
chr8 (168-275)||(43413862-43413969)
chr8 (168-282)||(5904350-5904464)
chr8 (200-298)||(30466668-30466766)
chr8 (180-296)||(38063968-38064084)
chr8 (168-289)||(1360111-1360231)
chr8 (168-294)||(13906597-13906728)
chr8 (168-298)||(23139063-23139195)
chr8 (179-296)||(41845416-41845533)
chr8 (168-294)||(19733045-19733171)
chr8 (168-290)||(22652680-22652802)
chr8 (168-282)||(39104612-39104725)
chr8 (199-277)||(36103929-36104007)
chr8 (168-294)||(36587626-36587752)
chr8 (225-294)||(10161957-10162026)
chr8 (203-283)||(43456663-43456743)
chr8 (189-277)||(279994-280081)
chr8 (189-277)||(635771-635858)
chr8 (189-277)||(821574-821661)
chr8 (240-296)||(29114093-29114149)
chr8 (168-283)||(8349459-8349574)
chr8 (168-294)||(8350429-8350556)
chr8 (168-275)||(34037924-34038031)
chr8 (168-277)||(11052560-11052669)
chr8 (168-277)||(38544901-38545009)
chr8 (211-295)||(12831562-12831646)
chr8 (171-287)||(19957300-19957416)
chr8 (179-291)||(45536714-45536826)
chr8 (169-291)||(3311436-3311558)
chr8 (169-282)||(10201267-10201380)
chr8 (204-277)||(16973032-16973105)
chr8 (226-283)||(40103526-40103583)
chr8 (256-296)||(32822107-32822147)
[»] chr5 (17 HSPs)
chr5 (168-295)||(15470597-15470724)
chr5 (168-293)||(31250141-31250266)
chr5 (168-296)||(38503233-38503361)
chr5 (177-293)||(43227860-43227976)
chr5 (168-295)||(930914-931041)
chr5 (168-291)||(42208913-42209035)
chr5 (168-294)||(12375383-12375514)
chr5 (168-288)||(17077360-17077480)
chr5 (168-283)||(5263173-5263288)
chr5 (168-294)||(5039674-5039799)
chr5 (190-297)||(87781-87888)
chr5 (169-275)||(15106864-15106970)
chr5 (169-282)||(1572115-1572228)
chr5 (226-294)||(461999-462067)
chr5 (245-277)||(42643856-42643888)
chr5 (252-296)||(1984249-1984293)
chr5 (168-216)||(42902041-42902089)
[»] scaffold0001 (1 HSPs)
scaffold0001 (168-294)||(419705-419831)
[»] chr2 (30 HSPs)
chr2 (168-294)||(34107488-34107613)
chr2 (171-292)||(18424131-18424249)
chr2 (169-276)||(5901808-5901915)
chr2 (168-298)||(41749936-41750065)
chr2 (168-293)||(31149078-31149202)
chr2 (168-293)||(43027149-43027274)
chr2 (189-293)||(33482639-33482743)
chr2 (168-295)||(3330177-3330304)
chr2 (168-294)||(25553122-25553247)
chr2 (171-297)||(19843342-19843468)
chr2 (168-277)||(6866518-6866627)
chr2 (168-288)||(33065233-33065353)
chr2 (168-275)||(17543066-17543173)
chr2 (169-294)||(40203256-40203381)
chr2 (240-290)||(16403522-16403572)
chr2 (226-295)||(11069379-11069448)
chr2 (179-298)||(27463514-27463632)
chr2 (168-230)||(5207149-5207211)
chr2 (209-291)||(32084841-32084923)
chr2 (189-294)||(20435774-20435879)
chr2 (168-273)||(42541170-42541274)
chr2 (189-294)||(43684272-43684376)
chr2 (185-269)||(30856510-30856594)
chr2 (225-287)||(24592845-24592906)
chr2 (169-283)||(31848275-31848389)
chr2 (256-294)||(41541579-41541617)
chr2 (168-269)||(33613581-33613682)
chr2 (203-239)||(18007297-18007333)
chr2 (189-285)||(28819625-28819721)
chr2 (225-297)||(34903508-34903579)
[»] scaffold0054 (1 HSPs)
scaffold0054 (185-283)||(22463-22561)
[»] scaffold0018 (1 HSPs)
scaffold0018 (225-294)||(121832-121901)
[»] scaffold0072 (1 HSPs)
scaffold0072 (189-263)||(17730-17804)


Alignment Details
Target: chr4 (Bit Score: 366; Significance: 0; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 18 - 620
Target Start/End: Complemental strand, 49635699 - 49635101
Alignment:
Q  18 aatgtcaatgttaagtttcatgttacatttgaagctagaaatataccgtaaatgattttagatatatattttggataggaagnnnnnnnntgtgtgtttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||    
T  49635699 aatgtcaatgttaagtttcatgttacatttgaagctagaaatataccgtaaatgattttagatatatattttggataggaagaaaaaaa-tgtgtgtttt 49635601  T
Q  118 atccaaaaatttacatttacacgaagnnnnnnnctgtgannnnnnnattagtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtga 217  Q
    ||||||||||||||||||||||||||        |||||        ||||||||||||||| |||  || |||||||||  ||||||||||||||||||    
T  49635600 atccaaaaatttacatttacacgaagaaaaaaattgtgattttttt-ttagtcaagtagcttggtgattagagaaattcactttaaaaatgaataagtga 49635502  T
Q  218 gatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggacaattgtgannnnnnnnnnaatgc 317  Q
    ||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||||||| ||||  ||||||||||| ||||||          |||||    
T  49635501 gatgtatggggtttgaatctcagtccttgcatatattgtgcattatcccttaccaaatgagctaaactcatggggacagttgtgatttttttt--aatgc 49635404  T
Q  318 atgtttagaaaataattgggtaattactcacaaagcatcaaccgaacggtaattaactatcaacactttttaaatggattaattaattgttaagtcagtt 417  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  49635403 atgtttagaaaataattgggtaattactcacaaagcatcaaccaaacggtaattaactatcaacactttttaaatggattaattcattgttaagttagtt 49635304  T
Q  418 taaccgatgtaaaaattgtttcaaacgatagttaattattgtttagacgcttgttaggtgtcttaagagcaaatttcaaatacttgtgagaggtg-aaag 516  Q
    ||||||||||||||| | ||| ||||| ||||||||||||| || |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  49635303 taaccgatgtaaaaaatattttaaacggtagttaattattg-ttcgacgcttgttaaatgtcttaagagcaaatttcaaatacttgtgagaggtgaaaag 49635205  T
Q  517 agtgagcacatgagaaggagtttcatagcacatttaagatgaaacgggcttatggtacttttaccaagctgcaccctacaaaatctttatttaattttgg 616  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49635204 agtgagcacatgagaaggagtttcatagcacatttaagatgaaacgggtttatggtacttttaccaagctgcaccctacaaaatttttatttaattttgg 49635105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 16556570 - 16556447
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| |||||||  ||| |||||||||||||||||||||||    
T  16556570 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgttcggggttcgaaccccgacccctgcacatattgtgcattatccct 16556471  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    |||||||||| ||||| |||||||    
T  16556470 taccaaatgagctaagctcatggg 16556447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 168 - 293
Target Start/End: Original strand, 40406936 - 40407062
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccag-cccttgcacatattgtgcattatccc 266  Q
    |||||| ||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| | ||| ||||||||||||||||||||||    
T  40406936 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacccccggcccctgcacatattgtgcattatccc 40407035  T
Q  267 ttaccaaatgaactaagttcatgggga 293  Q
    ||||||||||| ||||| |||||||||    
T  40407036 ttaccaaatgagctaagctcatgggga 40407062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 168 - 296
Target Start/End: Complemental strand, 51974866 - 51974738
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| | ||||||| |||||| || |||||||| |||||  | |||| ||| |||  ||| |||||||||||||||||||||||    
T  51974866 gtcaagtagcctagtggctagataaattcaccttaaagataaataagtgggatgtccgaggttcgaatcccgacccctgcacatattgtgcattatccct 51974767  T
Q  268 taccaaatgaactaagttcatggggacaa 296  Q
    |||||||||| ||||| ||||||||||||    
T  51974766 taccaaatgagctaagctcatggggacaa 51974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 46283241 - 46283115
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||| ||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||  |||||||||||||||||||||||    
T  46283241 gtcaagtagtctagtgactagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccgctgcacatattgtgcattatccct 46283142  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    ||||||||||  |||| ||||||||||    
T  46283141 taccaaatgaggtaagctcatggggac 46283115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 2832048 - 2832175
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||| | ||||||||| || |||||| |||||| ||||||||||| | ||| ||||||| |||||||  ||| |||||||||||||||| | |||||    
T  2832048 tcaagtaacctagtggctagaggaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctgcacatattgtgcatcacccctt 2832147  T
Q  269 accaaatgaactaagttcatggggacaa 296  Q
    |||| |||| ||||| ||||||||||||    
T  2832148 accagatgagctaagctcatggggacaa 2832175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 203 - 294
Target Start/End: Complemental strand, 23449057 - 23448966
Alignment:
Q  203 aaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||||| | |||  |||||| |||||||| ||| ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  23449057 aaaatgaataagtggggtgttcggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaaataagctaagttcatggggac 23448966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 50815826 - 50815700
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| ||| || ||||||| ||| | |||  |||||| ||||||| |||| |||||| |||||||||||||| |    
T  50815826 gtcaagtagcctagtggctagagaaattcacctttaagatgaatatgtggggtgtccggggttcgaaccccggcccctgcacaaattgtgcattatcctt 50815727  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    || ||||||| ||||| ||||||||||    
T  50815726 tatcaaatgagctaagctcatggggac 50815700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 36993160 - 36993037
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||| ||||| ||||||||| ||||||||| |||||| |||||||| || | |||  ||||||  ||||||| ||| | |||||||||||||||||||||    
T  36993160 gtcaggtagcctagtggctagagaaattcaccttaaagatgaataattggggtgtccggggttcaaaccccaaccccttcacatattgtgcattatccct 36993061  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    || ||||||| ||||| |||||||    
T  36993060 tatcaaatgagctaagctcatggg 36993037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 45847902 - 45848024
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||| ||| ||| ||||||||||||||| |||||| ||||||||||| | |||  |||||| |||||||   || |||||||||| ||||||||||||    
T  45847902 gtcaagcagcctaggggctaaagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgatccctgcacatattatgcattatccct 45848001  T
Q  268 taccaaatgaactaagttcatgg 290  Q
    || |||||||  |||||||||||    
T  45848002 tatcaaatgagataagttcatgg 45848024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 48404113 - 48404235
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||||| |||  |||||| |||||||  | | | |||||||| | ||||||| ||    
T  48404113 gtcaagtagcctagtggctaaagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaaccccgacacctacacatattatacattatctct 48404212  T
Q  268 taccaaatgaactaagttcatgg 290  Q
    || ||||||| ||||| ||||||    
T  48404213 tatcaaatgagctaagctcatgg 48404235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 51707238 - 51707117
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||| |||||||| ||||||||||| |||||| ||||||||||| | ||| || |||| |||||||||||| | |||||||| || |||||||||    
T  51707238 gtcaagtagtttagtggccaaagaaattcaccttaaagatgaataagtg-ggtgtttgaggttcgaaccccagcccgtacacatattatgtattatccct 51707140  T
Q  268 taccaaatgaactaagttcatgg 290  Q
    ||| ||||||  |||| ||||||    
T  51707139 tactaaatgagttaagctcatgg 51707117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 22096388 - 22096477
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    ||||||||| |||||||||||||||||| | |||  || ||| ||||| | |||| ||||||||||||||||||||||||||||||||||    
T  22096388 agaaattcaccttaaaaatgaataagtggggtgtccggagttcgaacctcggcccctgcacatattgtgcattatcccttaccaaatgaa 22096477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 27862845 - 27862934
Alignment:
Q  206 atgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggaca 295  Q
    ||||||||||| | |||  |||||| |||||||||||| |||||| |||||||||||||||||| ||||||| ||||| |||||||||||    
T  27862845 atgaataagtggggtgtccggggttcgaaccccagcccctgcacaaattgtgcattatcccttatcaaatgagctaagctcatggggaca 27862934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 45355694 - 45355802
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| |||||||  ||| | |||||||||||||||||||||    
T  45355694 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtg-ggtgtccggggttcgaaccccgacccctacacatattgtgcattatccct 45355792  T
Q  268 taccaaatga 277  Q
    ||| ||||||    
T  45355793 tactaaatga 45355802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 45369435 - 45369543
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| |||||||  ||| | |||||||||||||||||||||    
T  45369435 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtg-ggtgtccggggttcgaaccccgacccctacacatattgtgcattatccct 45369533  T
Q  268 taccaaatga 277  Q
    ||| ||||||    
T  45369534 tactaaatga 45369543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 11491195 - 11491310
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| |||| || |||| |||||| ||| ||||||||||||    
T  11491195 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccggcccctgcacaaattatgcattatccct 11491294  T
Q  268 taccaaatgaactaag 283  Q
    |  ||||||| |||||    
T  11491295 tgtcaaatgagctaag 11491310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 22341838 - 22341961
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||| || || ||||||||| ||| || ||||| ||||| | ||| |||| ||||||||||| ||| | ||||||||||||||||||  |    
T  22341838 gtcaagtagcctagcggttagagaaattcacctttaagatgaacaagtggggtgtttgggatttgaaccccaacccctacacatattgtgcattatcttt 22341937  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    ||||||||||  ||||||||||||    
T  22341938 taccaaatgatttaagttcatggg 22341961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 37574391 - 37574266
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| ||||||  |||||||||| | ||   |||||||||||||| |||| |||| | |   ||||||||||||    
T  37574391 gtcaagtagcctagtggctagagaaattcaccttaaaggtgaataagtggggtgcccggggtttgaaccccggcccctgcatacaaa-tgcattatccct 37574293  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| ||||||||||    
T  37574292 taccaaatgagctaagctcatggggac 37574266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 291
Target Start/End: Original strand, 43362164 - 43362267
Alignment:
Q  188 aagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttca 287  Q
    |||||||||| |||||| ||||||||||| | |||  |||||| |||||||  ||| || | |||||||||||||||||||| ||||||| ||||| |||    
T  43362164 aagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgaatatattgtgcattatcccttagcaaatgagctaagctca 43362263  T
Q  288 tggg 291  Q
    ||||    
T  43362264 tggg 43362267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 8716443 - 8716493
Alignment:
Q  245 tgcacatattgtgcattatcccttaccaaatgaactaagttcatggggaca 295  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  8716443 tgcacatattgtgcattatcccttatcaaatgagctaagttcatggggaca 8716493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 13210146 - 13210266
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatg------gggtttgaaccccagcccttgcacatattgtgcattatcccttacca 272  Q
    ||||||||| ||||||||| ||||||| |||||||||||| |||  |      ||||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  13210146 tagtggctagagaaattcaccttaaaa-tgaataagtgaggtgtccgtacccggggttcgaaccccggcccctgcacatattgtgcattatccctgacca 13210244  T
Q  273 aatgaactaagttcatggggac 294  Q
    ||||| ||||| |||| |||||    
T  13210245 aatgagctaagctcatagggac 13210266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 25234835 - 25234943
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||  |||||| || ||||||||| |||||| |||||||| || | ||| ||||||| ||||| || ||| | ||| ||||||||||||||||||    
T  25234835 tcaagtagtctagtggttagagaaattcaccttaaagatgaataactggggtgtctggggttcgaacctcaacccctacacttattgtgcattatccctt 25234934  T
Q  269 accaaatga 277  Q
    | |||||||    
T  25234935 atcaaatga 25234943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 26885376 - 26885499
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| |||||| || |||||| || ||||||||   |||  |||||| ||||||| ||||  ||| ||| |||||||||||||     
T  26885376 gtcaagtagcctagtggctagagaaatccaccttaaagataaataagtggagtgtccggggttcgaaccccggccccagcatataatgtgcattatcccc 26885475  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    | |||||||| ||||| |||||||    
T  26885476 tgccaaatgagctaagctcatggg 26885499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 275
Target Start/End: Complemental strand, 42154685 - 42154578
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||||  || ||||| ||||||||| |||||| |||| |||||||  |||  |||||| |||||||  ||  ||||||||||||| |||||||||    
T  42154685 gtcaagtagcccagcggctagagaaattcaccttaaagatgattaagtgaagtgtccggggttcgaaccccgacctctgcacatattgtgaattatccct 42154586  T
Q  268 taccaaat 275  Q
    ||||||||    
T  42154585 taccaaat 42154578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 293
Target Start/End: Complemental strand, 38690782 - 38690660
Alignment:
Q  171 aagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttac 270  Q
    ||||||| ||| ||||| ||||||||| ||||||   ||||||||| | |||  |||||| |||||||  ||| |||| ||| | |||||||||||||||    
T  38690782 aagtagcctagcggctagagaaattcaccttaaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttac 38690683  T
Q  271 caaatgaactaagttcatgggga 293  Q
    ||| ||| ||||| |||||||||    
T  38690682 caagtgagctaagctcatgggga 38690660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 37889583 - 37889652
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaacccc 238  Q
    ||||||||| ||||||||| ||||||||| ||||||| |||||||||||| |||  |||||| |||||||    
T  37889583 tcaagtagcctagtggctagagaaattcaccttaaaagtgaataagtgaggtgtccggggttcgaacccc 37889652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 277
Target Start/End: Complemental strand, 8716667 - 8716564
Alignment:
Q  171 aagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttac 270  Q
    |||||||||||||  || ||||||||| |||| |  ||||||||||  ||||  || ||| ||||| | ||||| |||||||||||||||||||||||||    
T  8716667 aagtagcttagtgattagagaaattcaccttaga--tgaataagtggaatgtccggagttcgaacctcggccct-gcacatattgtgcattatcccttac 8716571  T
Q  271 caaatga 277  Q
    |||||||    
T  8716570 caaatga 8716564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 39387525 - 39387474
Alignment:
Q  240 gcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggg 291  Q
    |||| |||||| ||| |||||||||||||||||||||| |||||||||||||    
T  39387525 gcccctgcacaaattatgcattatcccttaccaaatgagctaagttcatggg 39387474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 24570309 - 24570223
Alignment:
Q  188 aagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaa 274  Q
    |||||||||| ||||||  |||||||||  | |||  |||||| |||||||| ||| | || |||||||||||||||||||||||||    
T  24570309 aagaaattcaccttaaagttgaataagtagggtgttcggggttcgaaccccaacccctacatatattgtgcattatcccttaccaaa 24570223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 290
Target Start/End: Original strand, 35909005 - 35909127
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccag-cccttgcacatattgtgcattatccct 267  Q
    ||||||| |||||||| |  | ||||||| |||||| || |||||||| | ||| |||| || ||||| | | ||| |||| ||||||||||||||||||    
T  35909005 tcaagtaacttagtggttggaaaaattcaccttaaagataaataagtggggtgtctgggattcgaacctccgacccctgcatatattgtgcattatccct 35909104  T
Q  268 taccaaatgaactaagttcatgg 290  Q
    ||| |||||| ||||| ||||||    
T  35909105 tacaaaatgagctaagctcatgg 35909127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 41971352 - 41971401
Alignment:
Q  245 tgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||| ||||||||||||| |||||||||||| ||||| ||||||||||    
T  41971352 tgcacaaattgtgcattatcacttaccaaatgagctaagctcatggggac 41971401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 34974733 - 34974693
Alignment:
Q  256 tgcattatcccttaccaaatgaactaagttcatggggacaa 296  Q
    ||||||||||||||||||||||| |||||||||| ||||||    
T  34974733 tgcattatcccttaccaaatgaattaagttcatgaggacaa 34974693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Complemental strand, 52366249 - 52366217
Alignment:
Q  245 tgcacatattgtgcattatcccttaccaaatga 277  Q
    |||||||||||||||||||||||||||||||||    
T  52366249 tgcacatattgtgcattatcccttaccaaatga 52366217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 298
Target Start/End: Complemental strand, 25104446 - 25104316
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  |||||||   ||||||||| |||||| |||||||| |||| | | |||  || ||| ||  | || ||||||||||||||||||||| |    
T  25104446 gtcaagtagtctagtggccggagaaattcaccttaaagatgaataaatgaggtatctggaattcgaatcctggtccctgcacatattgtgcattatcctt 25104347  T
Q  268 taccaaatgaactaagttcatggggacaatt 298  Q
     ||| ||||| ||||| ||| ||||||||||    
T  25104346 caccgaatgagctaagctcaaggggacaatt 25104316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 23233935 - 23234020
Alignment:
Q  178 ttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattat 263  Q
    |||||||||| | |||||||  || || ||||||||||| | ||| ||| ||||||||| || ||| |||||| ||||||||||||    
T  23233935 ttagtggctagaaaaattcacttttaatatgaataagtggggtgtttggagtttgaaccacaacccctgcacaaattgtgcattat 23234020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 31261759 - 31261808
Alignment:
Q  247 cacatattgtgcattatcccttaccaaatgaactaagttcatggggacaa 296  Q
    |||| |||||||||||||||||| |||||||| |||| ||||||| ||||    
T  31261759 cacacattgtgcattatcccttatcaaatgaattaagctcatgggaacaa 31261808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 4153254 - 4153218
Alignment:
Q  207 tgaataagtgagatgtatggggtttgaaccccagccc 243  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  4153254 tgaataagtgaggtgtttggggtttgaaccccagccc 4153218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 6087810 - 6087770
Alignment:
Q  224 tggggtttgaaccccagcccttgcacatattgtgcattatc 264  Q
    ||||||||||||||||| ||||||| ||||| |||||||||    
T  6087810 tggggtttgaaccccagaccttgcatatattatgcattatc 6087770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 49811384 - 49811432
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtg 216  Q
    |||||||||| ||| ||||| ||||||||||||||||  ||||||||||    
T  49811384 gtcaagtagcctagcggctagagaaattcatcttaaaggtgaataagtg 49811432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 5e-39; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 34702289 - 34702415
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||||| |||  |||||| ||||||| |||| |||||||||||||||||||||||    
T  34702289 gtcaagtagtctagtggctaaagaaattcatcttaaagatgaataagtgaggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 34702388  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| ||||||||||    
T  34702389 taccaaatgagctaagctcatggggac 34702415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 50011610 - 50011500
Alignment:
Q  184 gctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaag 283  Q
    |||| ||||||||| |||||| ||||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  50011610 gctagagaaattcaccttaaagatgaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaag 50011511  T
Q  284 ttcatggggac 294  Q
     ||||||||||    
T  50011510 ctcatggggac 50011500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 168 - 293
Target Start/End: Original strand, 24134600 - 24134725
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||| ||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| |||||||||||||||||||||||    
T  24134600 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 24134699  T
Q  268 taccaaatgaactaagttcatgggga 293  Q
    |||||||||| ||||| |||||||||    
T  24134700 taccaaatgagctaagctcatgggga 24134725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 43109214 - 43109342
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| |||||||| |||| |||  |||||| ||||||| |||| |||||||||| ||||||||||||    
T  43109214 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataaatgaggtgtccggggttcgaaccccggcccctgcacatattttgcattatccct 43109313  T
Q  268 taccaaatgaactaagttcatggggacaa 296  Q
    |||||||||| ||||| |||||| |||||    
T  43109314 taccaaatgagctaagctcatggagacaa 43109342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 47651990 - 47651868
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||||  |||||||| ||||||||| ||||||| |||||||||| ||||| | || || |||||||||||| |||||||||||||||||||||||    
T  47651990 gtcaagtagcccagtggctagagaaattcaccttaaaa-tgaataagtgggatgtctaggattcgaaccccagcccctgcacatattgtgcattatccct 47651892  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    |||||||||| ||||| |||||||    
T  47651891 taccaaatgagctaagctcatggg 47651868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 49620091 - 49619965
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| |||||||||  ||||| ||||||||||| | |||  ||||| ||||||||  ||| |||||||||||||||||||||||    
T  49620091 gtcaagtagcctagtggctagagaaattcactttaaagatgaataagtggggtgtccggggtctgaaccccgacccctgcacatattgtgcattatccct 49619992  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| ||||||||||    
T  49619991 taccaaatgagctaagctcatggggac 49619965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 47428871 - 47428994
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||| ||||||||||||||||||||||||  ||||| ||||||||||| | ||| ||||||| |||||||||||| ||||||||||||| | |||||||    
T  47428871 gtcaaatagcttagtggctaaagaaattcactttaaagatgaataagtggggtgtttggggttcgaaccccagcccatgcacatattgtgtactatccct 47428970  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    ||||| |||| ||||  |||||||    
T  47428971 taccagatgagctaaactcatggg 47428994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 15417793 - 15417919
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||| ||| |||||||||||||||| ||||||||||| | |||  | | || |||||||||||| | ||||||||||||||||||| |    
T  15417793 gtcaagtagcctagtgactagagaaattcatcttaaagatgaataagtggggtgtccgagcttcgaaccccagcccctacacatattgtgcattatcctt 15417892  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| ||||||||||    
T  15417893 taccaaatgagctaagctcatggggac 15417919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 2017661 - 2017788
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||| |||||||||| ||||||||| ||||||| |||| ||||| | |||  ||| || |||||||||||  |||||||||||||||||||||||    
T  2017661 gtcaagtagtttagtggctagagaaattcaccttaaaa-tgaacaagtggggtgtccgggattcgaaccccagcctatgcacatattgtgcattatccct 2017759  T
Q  268 taccaaatgaactaagttcatggggacaa 296  Q
    |||||||||| ||||| ||||| ||||||    
T  2017760 taccaaatgagctaagctcatgaggacaa 2017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 27054815 - 27054683
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatg--tatg----gggtttgaaccccagcccttgcacatattgtgcatt 261  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||||| ||  ||||    ||||| ||||||| |||| |||| ||||||||||||    
T  27054815 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgaggtgcctatgccgggggttcgaaccccggcccctgcagatattgtgcatt 27054716  T
Q  262 atcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||||||| ||||| ||||||||||    
T  27054715 atcccttaccaaatgagctaagctcatggggac 27054683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 189 - 296
Target Start/End: Complemental strand, 8893958 - 8893851
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    ||||||||| |||||| ||||||||||| | ||| ||||||| |||||||  ||| || |||||||||||||||||||||||||||||||||||| ||||    
T  8893958 agaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctgtacatattgtgcattatcccttaccaaatgaactaagctcat 8893859  T
Q  289 ggggacaa 296  Q
    | ||||||    
T  8893858 gtggacaa 8893851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 171 - 298
Target Start/End: Complemental strand, 50065126 - 50064999
Alignment:
Q  171 aagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttac 270  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||| | |||  | | || ||||||| | || |||||||||||||||||||||||||     
T  50065126 aagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtccgagattcgaaccccggtccctgcacatattgtgcattatcccttat 50065027  T
Q  271 caaatgaactaagttcatggggacaatt 298  Q
    ||||||| ||||| | ||||||||||||    
T  50065026 caaatgagctaagcttatggggacaatt 50064999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 12973254 - 12973382
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||||||||||| | |||||| ||||||||||| | |||  || ||||||| | | |||| |||| ||||||||||||||||||    
T  12973254 gtcaagtagtctagtggctaaagaaatttaccttaaagatgaataagtggggtgtcaggagtttgaatctcggcccctgcatatattgtgcattatccct 12973353  T
Q  268 taccaaatgaactaagttcatggggacaa 296  Q
    |||||||||| ||||  ||||||||||||    
T  12973354 taccaaatgagctaaactcatggggacaa 12973382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 25800309 - 25800435
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||||||| ||| |||||||||||| ||| || ||||||||||| | |||  |||||| ||||||| | || | || | ||||||||||||||||    
T  25800309 gtcaagtagcttaatggttaaagaaattcacctttaagatgaataagtggggtgtccggggttggaaccccggaccctacataaattgtgcattatccct 25800408  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||| |||||||||||||||| |||||    
T  25800409 taccgaatgaactaagttcattgggac 25800435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 40061562 - 40061436
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| |||||| || |||||| ||||||||||| | |||  || ||| |||||||||||| |  |||||||||||| |||||||    
T  40061562 gtcaagtagcctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggagttcgaaccccagcccctatacatattgtgcactatccct 40061463  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    ||||||||||  |||| ||||||||||    
T  40061462 taccaaatgagttaagctcatggggac 40061436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 7438740 - 7438617
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||||||||||||| ||| || ||||||||||| | |||  || ||| |||||||  ||| | |||| ||||||||||||||||    
T  7438740 gtcaagtagtctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggagttcgaaccccgacccctacacaaattgtgcattatccct 7438641  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    |||||||||| ||||| |||||||    
T  7438640 taccaaatgagctaagctcatggg 7438617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 290
Target Start/End: Original strand, 10123029 - 10123150
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | ||| ||||||| |||||||  ||| | ||||||||||  |||||||||    
T  10123029 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctacacatattgt-aattatccct 10123127  T
Q  268 taccaaatgaactaagttcatgg 290  Q
    ||||||||||  |||| ||||||    
T  10123128 taccaaatgagttaagctcatgg 10123150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 14262697 - 14262806
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||| |||||||||||||| ||||||||| |||||| ||||||||||  | |||  |||||| |||||||  ||| |||| ||||||||||||||||||    
T  14262697 gtcaaatagcttagtggctagagaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacccctgcatatattgtgcattatccct 14262796  T
Q  268 taccaaatga 277  Q
    || |||||||    
T  14262797 tatcaaatga 14262806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 171 - 297
Target Start/End: Complemental strand, 25421971 - 25421844
Alignment:
Q  171 aagtagcttagtggctaaagaaattcatcttaaaaa-tgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctta 269  Q
    |||||| ||||||| || ||||||||| |||  ||  ||||||||||   ||| |||||||||||||||||||| | |||| |||||||||| |||||||    
T  25421971 aagtagtttagtggttagagaaattcaccttttaaggtgaataagtggagtgtctggggtttgaaccccagcccctacacaaattgtgcattgtccctta 25421872  T
Q  270 ccaaatgaactaagttcatggggacaat 297  Q
    ||||||||  |||| |||||||||||||    
T  25421871 ccaaatgagttaagctcatggggacaat 25421844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 48497189 - 48497312
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||| | |||||| |||||||| ||   |||  ||| || |||| || |||| |||||||||||||||||||||||    
T  48497189 gtcaagtagcctagtggctagagaaatttaccttaaagatgaataaatggagtgtccgggattcgaactccggcccctgcacatattgtgcattatccct 48497288  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    |||||||||| ||||  |||||||    
T  48497289 taccaaatgagctaaactcatggg 48497312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 278
Target Start/End: Original strand, 25031473 - 25031583
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||| ||| ||||||||| ||||||||| |||||| ||||||||||| | |||  ||  || ||||||| |||| |||||||||| ||||||||| ||    
T  25031473 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggaattcgaaccccggcccctgcacatattatgcattatctct 25031572  T
Q  268 taccaaatgaa 278  Q
    |||||||||||    
T  25031573 taccaaatgaa 25031583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 50302838 - 50302948
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatg-gggtttgaaccccagccct-tgcacatattgtgcattatcccttaccaaatg 276  Q
    ||||||||| ||||||||| |||||| |||||||||| ||| || |  ||||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  50302838 tagtggctagagaaattcaccttaaagatgaataagt-aga-gtgtcagggttcgaaccccagccctctgcacatattatgcattatcccttaccaaatg 50302935  T
Q  277 aactaagttcatg 289  Q
    | |||| ||||||    
T  50302936 agctaaattcatg 50302948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 35527390 - 35527437
Alignment:
Q  247 cacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35527390 cacatattgtgcattatcccttaccaaatgagctaagttcatggggac 35527437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 12148570 - 12148672
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    ||||||||| |||||| ||||||||||| | ||| |||||||||||| ||  ||| |||||||||||| ||||||| ||||  |||||| ||||| ||||    
T  12148570 agaaattcaccttaaagatgaataagtggggtgtctggggtttgaactccgacccctgcacatattgtacattatcgcttataaaatgagctaagctcat 12148669  T
Q  289 ggg 291  Q
    |||    
T  12148670 ggg 12148672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 286
Target Start/End: Complemental strand, 19424165 - 19424047
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||| ||||| ||||||||| ||||||  |||||||||| | |||  |||||| |||||||  ||| |||| ||| | ||||||||||||    
T  19424165 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatccct 19424066  T
Q  268 taccaaatgaactaagttc 286  Q
    || ||||||| ||||||||    
T  19424065 tatcaaatgagctaagttc 19424047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 22386268 - 22386338
Alignment:
Q  224 tggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||    
T  22386268 tggggttcgaaccccaacccctgcacatattgtgcataatcccttaccaaatgagctaagctcgtggggac 22386338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 3347679 - 3347787
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||| ||| ||||| ||| ||||||||| |||||| ||||||||||| | |||| |||||| |||||||  | | || ||||||||| |||||||| |    
T  3347679 gtcaagcagcctagtgactagagaaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccgactcctgaacatattgtacattatccat 3347778  T
Q  268 taccaaatg 276  Q
    |||||||||    
T  3347779 taccaaatg 3347787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 25585343 - 25585407
Alignment:
Q  229 tttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatgggga 293  Q
    ||||||| | ||||| |||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  25585343 tttgaactctagcccctgcacatattgtgcatcatcctttaccaaatgaactaagctcatgggga 25585407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 39304256 - 39304307
Alignment:
Q  245 tgcacatattgtgcattatcccttaccaaatgaactaagttcatggggacaa 296  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  39304256 tgcacatattatgcattatcccttaccaaatgagctaagctcatggggacaa 39304307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 30735947 - 30735838
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||||| || ||||||||| |||  | ||||||||||| | |||   |||||  ||| || |||| |||||| ||||||||||||||||    
T  30735947 gtcaagtagcctagtggttagagaaattcacctttgagatgaataagtgtggtgtccagggttcaaactccggcccctgcacaaattgtgcattatccct 30735848  T
Q  268 taccaaatga 277  Q
    ||||||||||    
T  30735847 taccaaatga 30735838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 273
Target Start/End: Complemental strand, 47683770 - 47683667
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||||| || |||||||||||||||| |||||||| || ||| |   ||||| |||| || |||  |||||||||||||||||||||||    
T  47683770 gtcaagtagcctagtggttagagaaattcatcttaaacatgaataactg-gatat-ccgggttcgaactccggcctctgcacatattgtgcattatccct 47683673  T
Q  268 taccaa 273  Q
    ||||||    
T  47683672 taccaa 47683667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 275
Target Start/End: Original strand, 42937216 - 42937312
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaat 275  Q
    ||||||| | ||||||||| |||||| |||||||| | || ||| ||  ||| |||| ||| ||| ||||||||||||||||||| |||||||||||    
T  42937216 tagtggcgagagaaattcaccttaaagatgaataaataaggtgtctgaagttcgaactccaacccctgcacatattgtgcattattccttaccaaat 42937312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 15550926 - 15550879
Alignment:
Q  247 cacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||    
T  15550926 cacatattgtgcattatcccttaccaaatgagataagctcatggggac 15550879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 48813774 - 48813727
Alignment:
Q  247 cacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  48813774 cacatattatgcattatcccttaccaaatgaaataagctcatggggac 48813727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 52720802 - 52720703
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||  |||||| || |||||||||  ||||| ||||||||||| | ||| ||||||| ||||||||| || | |||| ||| |||||||||||||    
T  52720802 tcaagtagtctagtggttagagaaattcactttaaagatgaataagtgtggtgtctggggttcgaaccccagtccctacacacattatgcattatccctt 52720703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 4127018 - 4126892
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| | ||||||| |||||| |||||||| || | |||  || |||  |||  | |||  |||| ||||||||||||||||||    
T  4127018 gtcaagtagtctagtggctagataaattcaccttaaagatgaataaatggggtgtccggtgttcaaacatcggcctctgcatatattgtgcattatccct 4126919  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||  ||||||||||    
T  4126918 taccaaatgagctaaactcatggggac 4126892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 294
Target Start/End: Original strand, 24253640 - 24253745
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    ||||||||||||||||   |||||||| |||||| || |||| ||| |||  ||| |||| | ||| |||||||||||||| ||| ||| ||||| ||||    
T  24253640 agaaattcatcttaaaggcgaataagtaagatgtctgaggttcgaatcccgacccctgcataaattatgcattatcccttatcaagtgagctaagctcat 24253739  T
Q  289 ggggac 294  Q
    ||||||    
T  24253740 ggggac 24253745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 43196429 - 43196372
Alignment:
Q  178 ttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaac 235  Q
    |||| |||||||||| ||||||||||| ||||||||||||| | |||| |||||||||    
T  43196429 ttagcggctaaagaatttcatcttaaatatgaataagtgaggtatatgaggtttgaac 43196372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 30325020 - 30325064
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataa 213  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||    
T  30325020 tcaagtagtttagtggctagagaaattcatcttaaagatgaataa 30325064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 49239823 - 49239871
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtg 216  Q
    |||||||||||||||||||| ||||||| | |||||| |||||||||||    
T  49239823 gtcaagtagcttagtggctagagaaatttaccttaaagatgaataagtg 49239871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 52164368 - 52164456
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    ||||||||| ||||||||| |||||||| | |||  ||  || |||||||   || |||||||||||||||||||| ||||||||||||    
T  52164368 agaaattcaccttaaaaattaataagtggggtgtccggaattcgaaccccgatccctgcacatattgtgcattatctcttaccaaatga 52164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 23368708 - 23368831
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| | ||||||| ||| ||  |||||||||| | |||  |||||| ||||  | | || |||||| | ||||||||||||||    
T  23368708 gtcaagtagactagtggctagataaattcacctttaatgtgaataagtggggtgtccggggttcgaacatcggtccctgcacaaaatgtgcattatccct 23368807  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    || ||||||| ||||| |||||||    
T  23368808 tatcaaatgagctaagctcatggg 23368831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 15550988 - 15550938
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgag 218  Q
    |||||||| | ||||||||| ||||||||| |||||| |||||||||||||    
T  15550988 gtcaagtaacctagtggctacagaaattcaccttaaagatgaataagtgag 15550938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 29917570 - 29917632
Alignment:
Q  206 atgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||||||| ||| ||||||| ||||||||  || |||||| |||||| ||||||||||    
T  29917570 atgaataagtgaggtgtctggggttcgaaccccaatccctgcacaaattgtgtattatccctt 29917632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 2350351 - 2350423
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccag 240  Q
    |||||||||| ||| |||||||||||||||  |||||  |||||||||| | |||  |||||| |||||||||    
T  2350351 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtggggtgttcggggttcgaaccccag 2350423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 42946443 - 42946543
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||  ||||| ||||||||| ||| ||  |||||||||| | |||  ||||||  ||||||||||| |||| ||| | ||||||||||||    
T  42946443 gtcaagtagcctaacggctagagaaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatataatatgcattatccct 42946542  T
Q  268 t 268  Q
    |    
T  42946543 t 42946543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 9e-38; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 33528181 - 33528309
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | ||| ||||||| |||||||||||| |||||| ||||||||||||||||    
T  33528181 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatccct 33528280  T
Q  268 taccaaatgaactaagttcatggggacaa 296  Q
    |||||||||| ||||| ||||||||||||    
T  33528281 taccaaatgagctaagctcatggggacaa 33528309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 292
Target Start/End: Complemental strand, 47864755 - 47864631
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| |||||||| ||| |||||||||||||||||||||||    
T  47864755 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgcacatattgtgcattatccct 47864656  T
Q  268 taccaaatgaactaagttcatgggg 292  Q
    |||||||||| ||||| | ||||||    
T  47864655 taccaaatgagctaagcttatgggg 47864631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 39739393 - 39739270
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| ||||||||| |||||| ||||||||||||| |||  |||||| ||||||||  || |||||||||||||||||||||||    
T  39739393 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaaccccaatccctgcacatattgtgcattatccct 39739294  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    |||||||||| ||||| |||||||    
T  39739293 taccaaatgagctaagctcatggg 39739270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 2259269 - 2259150
Alignment:
Q  174 tagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaa 273  Q
    ||||||| |||||| | ||||| | |||||| |||||||||| || ||| |||||||||||| || |||| |||||||||||||||||||||||||||||    
T  2259269 tagcttattggctagataaatttaccttaaagatgaataagt-aggtgtctggggtttgaactccggcccctgcacatattgtgcattatcccttaccaa 2259171  T
Q  274 atgaactaagttcatggggac 294  Q
    |||| ||||| ||||||||||    
T  2259170 atgagctaagctcatggggac 2259150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 168 - 295
Target Start/End: Original strand, 16141329 - 16141456
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||||| || | ||||| | ||| || ||||||||||| | ||| ||| ||| ||||||||||||||| ||||||||||||||||||||    
T  16141329 gtcaagtagcctagtggttagataaatttacctttaagatgaataagtggggtgtctggagttcgaaccccagcccttgtacatattgtgcattatccct 16141428  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    || ||||||||||| | |||||||||||    
T  16141429 tatcaaatgaactatgctcatggggaca 16141456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 29226424 - 29226313
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    ||||||||| |||||| ||||||||||| | |||| |||||| ||||||| |||| |||||||||||||  |||||||||||||||||| ||||| ||||    
T  29226424 agaaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccggcccctgcacatattgtgtgttatcccttaccaaatgagctaagctcat 29226325  T
Q  289 ggggacaattgt 300  Q
    ||||| ||||||    
T  29226324 ggggataattgt 29226313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 46247381 - 46247253
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataag---tgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatc 264  Q
    |||||||||| ||||||| | ||||||||| |||||| |||||||||   || | ||| ||||||| |||||||||||| |||||| |||||||||||||    
T  46247381 gtcaagtagcctagtggc-agagaaattcaccttaaagatgaataagaagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatc 46247283  T
Q  265 ccttaccaaatgaactaagttcatggggac 294  Q
    ||||||||||||| ||||| ||||||||||    
T  46247282 ccttaccaaatgagctaagctcatggggac 46247253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 166907 - 166780
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||| |||||||||||||||  |||||  |||||||||||| ||| ||||||| ||||||| |||| |||| | ||| ||||||||||||    
T  166907 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtgaggtgtctggggttcgaaccccggcccctgcataaattatgcattatccct 166808  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    |||||| ||| ||||| ||| |||||||    
T  166807 taccaagtgagctaagctcacggggaca 166780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 11483732 - 11483605
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  |||| |||| ||||||||| |||||| ||||||||||| | |||  || ||| ||||||  |||| |||||||||| ||||||||||||    
T  11483732 gtcaagtagtctagttgctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaaccctggcccctgcacatattttgcattatccct 11483633  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    |||||||||| ||||| |||||||||||    
T  11483632 taccaaatgagctaagctcatggggaca 11483605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 30162780 - 30162650
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatg-----gggtttgaaccccagcccttgcacatattgtgcatta 262  Q
    ||||| |||| |||| |||| ||||||||| ||||||| |||||||||||| |||  |     ||||| ||||||| |||||||||||||||||||||||    
T  30162780 gtcaaatagcctagttgctagagaaattcaccttaaaa-tgaataagtgaggtgtccgtgcccgggttcgaaccccggcccttgcacatattgtgcatta 30162682  T
Q  263 tcccttaccaaatgaactaagttcatggggac 294  Q
    ||||||||||||||| ||||| ||||||||||    
T  30162681 tcccttaccaaatgagctaagctcatggggac 30162650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 22602179 - 22602293
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| ||||| |||| || ||||| |  ||| | ||||||||||||||||| |||    
T  22602179 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgcgatgtctgggattcgaacctcgtcccctacacatattgtgcattattcct 22602278  T
Q  268 taccaaatgaactaa 282  Q
    |||||||||| ||||    
T  22602279 taccaaatgagctaa 22602293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 27471626 - 27471514
Alignment:
Q  165 ttagtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatc 264  Q
    ||||||||||||  ||||||||| ||||||| | |||||| ||||||||||| | |||  |||||| |||||||| ||| || ||||||| |||||||||    
T  27471626 ttagtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgtacatattatgcattatc 27471527  T
Q  265 ccttaccaaatga 277  Q
    |||||||||||||    
T  27471526 ccttaccaaatga 27471514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 293
Target Start/End: Complemental strand, 25165563 - 25165434
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaa---tgaataagtgaga-tgtatggggtttgaaccccagcccttgcacatattgtgcattat 263  Q
    |||||| ||| ||||||||| ||||||||| ||||||||   |||||||||| |  |||  |||||| ||||||| | || |||||||||||||||||||    
T  25165563 gtcaagcagcctagtggctagagaaattcaccttaaaaaagatgaataagtgggggtgtccggggttcgaaccccggtccctgcacatattgtgcattat 25165464  T
Q  264 cccttaccaaatgaactaagttcatgggga 293  Q
    |||||||||||||| ||||| |||||||||    
T  25165463 cccttaccaaatgagctaagctcatgggga 25165434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 31435477 - 31435580
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| ||||||||| |||||| ||||||||||| |||||  | |||| |||||||| ||| | |||||||||||||||||||||    
T  31435477 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccaacccctacacatattgtgcattatccct 31435576  T
Q  268 tacc 271  Q
    ||||    
T  31435577 tacc 31435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 50381833 - 50381706
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||| ||| || |||||| ||||||||| |||||| ||||||||||| | |||  ||| || |||||||  ||| |||| ||||||||||||||||||    
T  50381833 gtcaagcagcctaatggctagagaaattcaccttaaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatatattgtgcattatccct 50381734  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    ||||||||||  |||| |||||||||||    
T  50381733 taccaaatgagttaagctcatggggaca 50381706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 32421467 - 32421341
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||| |||||||||| | |||||||||||||| ||||||||||| |  ||  | |||| |||||||  ||| |||| ||||| ||||||||||||    
T  32421467 gtcaagtagtttagtggctagaaaaattcatcttaaagatgaataagtggggagttcgaggttcgaaccccgacccctgcatatattatgcattatccct 32421368  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    ||||| |||| ||||| ||||||||||    
T  32421367 taccagatgagctaagctcatggggac 32421341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 55426229 - 55426107
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||    ||| | |||  |||||| ||||| | |||| ||||||||||||||||||||| |    
T  55426229 gtcaagtagcctagtggctagagaaattcaccttaaagatga----gtggggtgtccggggttcgaacctcggcccatgcacatattgtgcattatcctt 55426134  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| ||||||||||    
T  55426133 taccaaatgagctaagctcatggggac 55426107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 33780423 - 33780308
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattca-tcttaaaaatgaataagtgagat-gtatggggtttgaaccccagcccttgcacatattgtgcattatcc 265  Q
    ||||||||||||||| |||||||||||||| | ||||| ||||||||||| ||| || || |||| |||||||| ||| || | ||||||||||||||||    
T  33780423 gtcaagtagcttagtagctaaagaaattcactattaaagatgaataagtg-gatagtttgaggttcgaaccccaacccctgtatatattgtgcattatcc 33780325  T
Q  266 cttaccaaatgaactaa 282  Q
    |||||||||||| ||||    
T  33780324 cttaccaaatgagctaa 33780308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 9320935 - 9321049
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||||| || ||||||||||||| || ||||||||||| | |||  ||| || |||||||| ||| |||||| ||||| ||||||||||    
T  9320935 gtcaagtagcctagtggttagagaaattcatctttaagatgaataagtggggtgttcgggtttcgaaccccaacccctgcacaaattgtacattatccct 9321034  T
Q  268 taccaaatgaactaa 282  Q
    || ||||||| ||||    
T  9321035 tatcaaatgagctaa 9321049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 27817044 - 27817169
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| |||||||| || | |||  ||| || |||| || |||| |||||| ||||||||||||||||    
T  27817044 gtcaagtagcctagtggctagagaaattcaacttaaagatgaataaatggggtgtccggg-ttcgaactccggcccctgcacaaattgtgcattatccct 27817142  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    ||||||||||  |||| |||| |||||    
T  27817143 taccaaatgaggtaagctcatagggac 27817169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 46798701 - 46798575
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||||| || ||||||  | |||||| ||||||||||| | |||   ||||| ||| ||| |||| |||||||||||||||||||||||    
T  46798701 gtcaagtagcctagtggttagagaaatctaccttaaagatgaataagtggggtgtccagggttcgaatcccggcccctgcacatattgtgcattatccct 46798602  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
     |||||||||  |||| ||||||||||    
T  46798601 caccaaatgagttaagctcatggggac 46798575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 38668247 - 38668138
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| ||||||||| |||||| ||||||||||| | |||  ||| ||| ||| ||| ||| | ||| |||||||||||||||||    
T  38668247 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtcagggatttcaactccaacccctacacgtattgtgcattatccct 38668148  T
Q  268 taccaaatga 277  Q
    ||||||||||    
T  38668147 taccaaatga 38668138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 33830345 - 33830453
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    |||||||| ||| ||| || ||||||||| |||||||||||||||||| | ||| ||| |||  |||   ||||| |||| ||||||||||||||| |||    
T  33830345 tcaagtagtttattggttagagaaattcaccttaaaaatgaataagtggggtgtctggagttcaaactagagcccctgcatatattgtgcattatctctt 33830444  T
Q  269 accaaatga 277  Q
    |||||||||    
T  33830445 accaaatga 33830453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 34225243 - 34225187
Alignment:
Q  239 agcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggaca 295  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  34225243 agcccctgcacatattgtgcattatcccttaccaaatgagctaagctcatggagaca 34225187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 298
Target Start/End: Complemental strand, 50271849 - 50271719
Alignment:
Q  167 agtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccc 266  Q
    ||||||||||  ||| || || ||||||||| ||||||  |||||||||| |||||| |||||| ||||| | |||| |||| | |   ||||||||| |    
T  50271849 agtcaagtagtctagcggttagagaaattcaccttaaaggtgaataagtgggatgtacggggttcgaaccacggcccctgcatacaaa-tgcattatctc 50271751  T
Q  267 ttaccaaatgaactaagttcatggggacaatt 298  Q
    ||||||||||| ||||| ||||||||||||||    
T  50271750 ttaccaaatgagctaagctcatggggacaatt 50271719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 294
Target Start/End: Original strand, 1084008 - 1084130
Alignment:
Q  165 ttagtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatc 264  Q
    ||||||||||||| |||||||| | ||||||||  ||||| ||||||| ||||| |||  |||||| |||||||      |||||||||||| |||||||    
T  1084008 ttagtcaagtagcctagtggctgacgaaattcactttaaagatgaata-gtgaggtgtccggggttcgaacccc------tgcacatattgtacattatc 1084100  T
Q  265 ccttaccaaatgaactaagttcatggggac 294  Q
    | ||| ||||||| ||||| ||||||||||    
T  1084101 ctttaacaaatgagctaagctcatggggac 1084130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 29645803 - 29645889
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatatt 254  Q
    |||||||||  ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| ||||||||||    
T  29645803 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatatt 29645889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 31419663 - 31419593
Alignment:
Q  207 tgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    |||||||||| | ||| ||||||| |||||||||||| | |||||||||||| || |||||||||||||||    
T  31419663 tgaataagtggggtgtttggggttcgaaccccagcccctacacatattgtgcgttgtcccttaccaaatga 31419593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 36590503 - 36590383
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatg------gggtttgaaccccagcccttgcacatattgtgcattatcccttacca 272  Q
    ||||||||| ||||||||| ||||||| |||||||||||| |||  |      ||||| ||||| | |||| |||||||||||| |||||||||||||||    
T  36590503 tagtggctagagaaattcaccttaaaa-tgaataagtgaggtgtccgtgcccggggttcgaaccacggcccctgcacatattgtacattatcccttacca 36590405  T
Q  273 aatgaactaagttcatggggac 294  Q
    ||||| ||||  ||||||||||    
T  36590404 aatgagctaatctcatggggac 36590383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 296
Target Start/End: Original strand, 985906 - 986023
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    ||||||||| ||||||||| ||| || ||||||||||| | |||  ||| ||   |||||||||| |||||| |||||||||||| ||||||||||| |     
T  985906 tagtggctagagaaattcacctttaagatgaataagtggggtgtccgggattcagaccccagcccctgcacaaattgtgcattatgccttaccaaataag 986005  T
Q  279 ctaagttcatggggacaa 296  Q
     ||||  |||||||||||    
T  986006 ttaagcacatggggacaa 986023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 1325307 - 1325415
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagt-gagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccc 266  Q
    |||||||||  |||||||||||||||||||||||||| |||||||| | | | |||  |||||| ||| |||   || || | |||||||||||||||||    
T  1325307 gtcaagtagtctagtggctaaagaaattcatcttaaagatgaataaatgggggtgtccggggttcgaatcccgatccctgtatatattgtgcattatccc 1325406  T
Q  267 ttaccaaat 275  Q
    |||||||||    
T  1325407 ttaccaaat 1325415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 44062018 - 44062113
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatc 264  Q
    |||||||||  ||||||||| ||| ||||| |||||| ||||||||||| | |||  |||||| |||| || |||| ||||||||||||||||||||    
T  44062018 gtcaagtagtctagtggctagagacattcaccttaaagatgaataagtggggtgt-cggggttcgaactccggcccctgcacatattgtgcattatc 44062113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 7239846 - 7239795
Alignment:
Q  247 cacatattgtgcattatcccttaccaaatgaactaagttcatggggacaatt 298  Q
    ||||||||||| | ||||||||||||||||||||||| ||| ||||||||||    
T  7239846 cacatattgtgtaatatcccttaccaaatgaactaagctcacggggacaatt 7239795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 293
Target Start/End: Complemental strand, 7518059 - 7517934
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| || |||||| || ||||||  || || ||| ||||||| | |||  |||||| ||||| | || | |||||| |||||||| |||||||    
T  7518059 gtcaagtagcctaatggctagaggaattcacttttaagatggataagtggggtgttcggggttcgaaccgcggctcctgcacaaattgtgcaatatccct 7517960  T
Q  268 taccaaatgaactaagttcatgggga 293  Q
    |||||||||| ||||| | |||||||    
T  7517959 taccaaatgagctaagctaatgggga 7517934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 273
Target Start/End: Complemental strand, 27394626 - 27394522
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||| ||||| ||||||||| ||||||  |||||||||| | |||  ||||||  ||||||||||| |||| |||   ||||||||||||    
T  27394626 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatata-aatgcattatccct 27394528  T
Q  268 taccaa 273  Q
    ||||||    
T  27394527 taccaa 27394522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 37756428 - 37756490
Alignment:
Q  207 tgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctta 269  Q
    |||||||||| | ||| ||||||| |||||||||||| |||| | ||| ||||||||||||||    
T  37756428 tgaataagtggggtgtttggggttcgaaccccagcccctgcataaattatgcattatccctta 37756490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 8258194 - 8258145
Alignment:
Q  245 tgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||||||||| || |||||||||||  |||| ||||||||||    
T  8258194 tgcacatattgtgcattaaccattaccaaatgagttaagctcatggggac 8258145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 42913448 - 42913497
Alignment:
Q  245 tgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    ||||||||||||||||| ||||||| ||||||| ||||| || |||||||    
T  42913448 tgcacatattgtgcattttcccttagcaaatgagctaagctcgtggggac 42913497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 17218553 - 17218486
Alignment:
Q  225 ggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatgggga 293  Q
    |||||||||||||| ||||||||| ||| | |||| |||||| |||||| ||| ||||| |||||||||    
T  17218553 ggggtttgaaccccggcccttgcatataatatgcaatatccc-taccaactgagctaagctcatgggga 17218486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 48433686 - 48433812
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||||||||||| |||| |||||||||||||||||||||||    
T  48433686 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggtttgaaccccggcccctgcacatattgtgcattatccct 48433785  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| ||||||||||    
T  48433786 taccaaatgagctaagctcatggggac 48433812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 12166201 - 12166079
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||| ||||| |||| ||||||||| |||||| ||||||||||| | ||| ||||||| |||||||||||| |||||| ||||||||||||||||    
T  12166201 gtcaagtagtttagtagctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatccct 12166102  T
Q  268 taccaaatgaactaagttcatgg 290  Q
    |||||||||| ||||||||||||    
T  12166101 taccaaatgagctaagttcatgg 12166079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 38378338 - 38378211
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||| | |||  ||||||  |||||| |||| |||||||||||||||||||||||    
T  38378338 gtcaagtagcttagtgggtagagaaattcaccttaaaaatgaataagtggggtgtccggggttcaaaccccggcccctgcacatattgtgcattatccct 38378239  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    |||||||| ||||||  |||||||||||    
T  38378238 taccaaataaactaaactcatggggaca 38378211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 183 - 295
Target Start/End: Complemental strand, 40273925 - 40273813
Alignment:
Q  183 ggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaa 282  Q
    ||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  40273925 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 40273826  T
Q  283 gttcatggggaca 295  Q
    | |||||||||||    
T  40273825 gctcatggggaca 40273813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 23824569 - 23824695
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||| | ||||||||| ||||||||| |||||| ||||||||||  | |||  ||| || ||||| | |||| ||||||||||||||||||||||||    
T  23824569 tcaagtaacctagtggctagagaaattcaccttaaagatgaataagtagggtgtccggg-ttcgaacctcggcccatgcacatattgtgcattatccctt 23824667  T
Q  269 accaaatgaactaagttcatggggacaa 296  Q
    ||||||||| ||||| ||||||||||||    
T  23824668 accaaatgagctaagctcatggggacaa 23824695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 3961384 - 3961514
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||| |||| ||||||||| ||| |||||||||||||| |||||  |||||| ||||||| |||  |||||| |||||||||||||| |    
T  3961384 gtcaagtagcctagtagctagagaaattcacctttaaaatgaataagtgggatgtccggggttcgaaccccggcctctgcacaaattgtgcattatcctt 3961483  T
Q  268 taccaaatgaactaagttcatggggacaatt 298  Q
    ||||||||||  |||  || |||||||||||    
T  3961484 taccaaatgagttaaactcgtggggacaatt 3961514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 274
Target Start/End: Original strand, 4956068 - 4956174
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||   ||||| |||||||  ||| |||||||||||||||||||||||    
T  4956068 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccagggttcgaaccccgacccctgcacatattgtgcattatccct 4956167  T
Q  268 taccaaa 274  Q
    |||||||    
T  4956168 taccaaa 4956174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 31793587 - 31793461
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||| | ||||||||| |||||| || |||||| ||||||||||| | |||  |||||| |||||||  ||| |||||||||||||||||||||||    
T  31793587 gtcaagtaacctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgcacatattgtgcattatccct 31793488  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    || ||||||| ||||| ||||| ||||    
T  31793487 taacaaatgagctaagctcatgtggac 31793461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 43440797 - 43440683
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    ||||||||| ||||||||| |||||| ||||||||||| | ||| |||  || |||||||  ||  ||||||||||||||||||||||||||||||| ||    
T  43440797 tagtggctagagaaattcaccttaaagatgaataagtggggtgtctggaattcgaaccccgacctctgcacatattgtgcattatcccttaccaaataaa 43440698  T
Q  279 ctaagttcatgggga 293  Q
    ||||||||| |||||    
T  43440697 ctaagttcacgggga 43440683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 24030089 - 24029978
Alignment:
Q  183 ggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaa 282  Q
    ||||| ||||||||| |||||| |||||||| || | ||| ||||||| ||||||| |||| | ||||||||||||||||||||||| ||||||| ||||    
T  24030089 ggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaaccccggcccctacacatattgtgcattatcccttatcaaatgagctaa 24029990  T
Q  283 gttcatggggac 294  Q
      ||||||||||    
T  24029989 actcatggggac 24029978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 36528206 - 36528321
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    ||||||||||| ||||||| |||||||||||||| ||| |||||  |||||| |||| ||  ||| |  ||||||||||||||||||||||||||||||     
T  36528206 tagtggctaaataaattcaccttaaaaatgaataggtgggatgtccggggttcgaactccgacccctatacatattgtgcattatcccttaccaaatgag 36528305  T
Q  279 ctaagttcatggggac 294  Q
     |||| ||||||||||    
T  36528306 ttaagctcatggggac 36528321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 42554742 - 42554631
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    |||||||||  |||||||| | |||| ||||||||||  | | |  |||||| |||||||| ||| |||||||||||||||||||||||||||||||||     
T  42554742 tagtggctagggaaattcaccataaagatgaataagtcgggtatccggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaaatgag 42554643  T
Q  279 ctaagttcatgg 290  Q
    ||||| ||||||    
T  42554642 ctaagctcatgg 42554631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 33248778 - 33248904
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||| | ||||||||||| |||||| ||||||||||  | |||  |||||| |||||||  ||  |||| ||||||||||| ||||||    
T  33248778 gtcaagtagtctagtgacgaaagaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacctctgcatatattgtgcatcatccct 33248877  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| ||||||||||    
T  33248878 taccaaatgagctaagctcatggggac 33248904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 27454131 - 27454007
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaa-atgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccc 266  Q
    |||||||||| ||||||||| ||||||||| |||  || ||||||||||| | |||  | |||| ||||| |  ||| |||||| |||||||||||||||    
T  27454131 gtcaagtagcctagtggctagagaaattcaccttttaagatgaataagtggggtgtccgaggttcgaacctcgacccctgcacaaattgtgcattatccc 27454032  T
Q  267 ttaccaaatgaactaagttcatggg 291  Q
    ||||||||||| ||||| |||||||    
T  27454031 ttaccaaatgagctaagctcatggg 27454007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 48619913 - 48619807
Alignment:
Q  170 caagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctta 269  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||   ||| ||  ||| ||| |||| ||| |||||||||||| |||||||| |||    
T  48619913 caagtagcttagtggctagagaaattcaccttaaagatgaataagtggagtgtctgaagttcgaa-cccaacccctgcacatattgtacattatccttta 48619815  T
Q  270 ccaaatga 277  Q
    ||||||||    
T  48619814 ccaaatga 48619807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 294
Target Start/End: Complemental strand, 15025274 - 15025149
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||| ||| || || ||||||||| ||||||  |||||||||| | |||  |||||||||||||| |||| || | | | | |||||||||||||    
T  15025274 tcaagtagcctagcgggtagagaaattcaccttaaaggtgaataagtggggtgttcggggtttgaaccccggcccctgtataaaatatgcattatccctt 15025175  T
Q  269 accaaatgaactaagttcatggggac 294  Q
    |||||||||  |||| ||||||||||    
T  15025174 accaaatgagttaagctcatggggac 15025149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 26455982 - 26456107
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||  ||||||||| ||||||||| ||| ||  ||||||| ||   ||| |||||||  |||  ||| || ||||||||||||||||| ||||||    
T  26455982 tcaagtagtctagtggctagagaaattcacctttaaggtgaataactggagtgtctggggttcaaacgtcagtccctgcacatattgtgcattgtccctt 26456081  T
Q  269 accaaatgaactaagttcatggggac 294  Q
    ||||||||| ||||| ||||||||||    
T  26456082 accaaatgagctaagctcatggggac 26456107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 1575757 - 1575686
Alignment:
Q  224 tggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggaca 295  Q
    ||||||| |||||||| ||| || |||||||||| |||||||||||||||||||  |||| |||||||||||    
T  1575757 tggggttcgaaccccaacccctgtacatattgtgtattatcccttaccaaatgagttaagctcatggggaca 1575686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 46266787 - 46266660
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  |||||| || | ||||||| ||| || ||||||||||| |||||    |||| |||||||  |||  ||||| ||||||||||||||||    
T  46266787 gtcaagtagtctagtggttagataaattcacctttaagatgaataagtgggatgttcaaggttcgaaccccgtcccccgcacaaattgtgcattatccct 46266688  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    ||||||||||  |||| |||||||||||    
T  46266687 taccaaatgagttaagctcatggggaca 46266660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 3902307 - 3902375
Alignment:
Q  225 ggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||| ||||||| ||||| ||||||||| |||||||||||||||||||||| ||||| || |||||||    
T  3902307 ggggttcgaaccccggccct-gcacatattttgcattatcccttaccaaatgagctaagctcgtggggac 3902375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 168 - 272
Target Start/End: Original strand, 28914853 - 28914958
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagccct-tgcacatattgtgcattatccc 266  Q
    |||||||||| ||||||||| ||||||||| ||| ||| |||||||||| | |||  |||||| ||||||| ||||  |||| ||| | |||||||||||    
T  28914853 gtcaagtagcctagtggctagagaaattcacctttaaagtgaataagtggggtgtccggggttcgaaccccggccccctgcatataatatgcattatccc 28914952  T
Q  267 ttacca 272  Q
    ||||||    
T  28914953 ttacca 28914958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 42338287 - 42338348
Alignment:
Q  232 gaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatgggga 293  Q
    |||||||  ||| ||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  42338287 gaaccccgtcccctgcacatattgtgcattattccttaccaaatgagctaagctcatgggga 42338348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 44986689 - 44986584
Alignment:
Q  192 aattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggg 291  Q
    |||||| ||| || ||| ||||||| | ||| ||||||| ||| ||| |||  |||||  |||||||||||||||||||||||||| ||||| ||||| |    
T  44986689 aattcacctttaagatggataagtggggtgtttggggttcgaatcccggccactgcactaattgtgcattatcccttaccaaatgagctaagctcatgag 44986590  T
Q  292 gacaat 297  Q
    ||||||    
T  44986589 gacaat 44986584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 24315364 - 24315444
Alignment:
Q  203 aaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaag 283  Q
    ||||| ||||||||  |||||||||||| |||||||  ||| | ||||||||||||||||||| |||| |||||| |||||    
T  24315364 aaaataaataagtggaatgtatggggttcgaaccccgacccctacacatattgtgcattatccattactaaatgagctaag 24315444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 34322015 - 34322127
Alignment:
Q  183 ggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaa 282  Q
    ||||| |||||||||  || || |||||||| || | ||| |||| ||  |||||||| || ||||||||||||||||||||||||| ||||||| |||     
T  34322015 ggctagagaaattcacgtttaagatgaataaatggggtgtctgggattcaaaccccagtccctgcacatattgtgcattatcccttatcaaatgagctat 34322114  T
Q  283 gttcatggggaca 295  Q
    | | |||||||||    
T  34322115 gcttatggggaca 34322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 23602393 - 23602278
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||||||||||||| ||||||  |||||||||||| |||  |||||| |||| || | |  |||| ||| | |||||||| |||    
T  23602393 gtcaagtagtctagtggctaaagaaattcaccttaaaggtgaataagtgaggtgtccggggttcgaactccggtcactgcatataatatgcattattcct 23602294  T
Q  268 taccaaatgaactaag 283  Q
    || ||||||| |||||    
T  23602293 tatcaaatgagctaag 23602278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 37665852 - 37665737
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    ||||||||||||||||||| ||||||   ||||||||| | |||  |||||||||||||| |||| |||| ||| | ||  |||||| |||||||||||     
T  37665852 tagtggctaaagaaattcaccttaaaggcgaataagtggggtgtccggggtttgaaccccggcccctgcatataatatgttttatcctttaccaaatgag 37665753  T
Q  279 ctaagttcatggggac 294  Q
     |||| ||| ||||||    
T  37665752 ttaagctcacggggac 37665737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 41468882 - 41468835
Alignment:
Q  241 cccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  41468882 cccttgcacaaattgtgcattaccccttaccaaatgaactaagctcat 41468835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 42841757 - 42841843
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatatt 254  Q
    ||||||||| | |||| ||| ||||||||| ||| || ||||||||||| | ||| ||||||| ||||||| | |||||||||||||    
T  42841757 gtcaagtagttcagtgtctagagaaattcacctttaagatgaataagtggggtgtctggggttcgaaccccggtccttgcacatatt 42841843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 35661156 - 35661221
Alignment:
Q  203 aaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    |||||||||||||||  ||| ||||||| |||||||| |   ||||||||||||||||||||||||    
T  35661156 aaaatgaataagtgaagtgtttggggttcgaaccccaactaatgcacatattgtgcattatccctt 35661221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 14707372 - 14707286
Alignment:
Q  207 tgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||||| | |||  |||||| |||||||| ||| |||| |||   |||||||||||||||||||||| ||||| ||||||||||    
T  14707372 tgaataagtggggtgtccggggttcgaaccccaacccctgcatataaa-tgcattatcccttaccaaatgagctaagctcatggggac 14707286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 294
Target Start/End: Original strand, 25775610 - 25775715
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    ||||||||| |||||| ||||||||||| | ||| ||| ||| ||||| | |  |||||| ||||| | |||||||| ||||||| ||| ||||  ||||    
T  25775610 agaaattcaccttaaagatgaataagtggggtgtttggagttcgaacctcggttcttgcatatattatacattatcctttaccaagtgagctaaactcat 25775709  T
Q  289 ggggac 294  Q
    ||||||    
T  25775710 ggggac 25775715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 273
Target Start/End: Complemental strand, 48525696 - 48525591
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||| | || |||||| ||||||  | ||||||  |||||||||||| |||  |||||| |||||||| ||| |||| ||| | |||||| |||||    
T  48525696 gtcaagtatcctaatggctagagaaatctaacttaaaggtgaataagtgaggtgtccggggttcgaaccccaacccctgcatataatatgcattgtccct 48525597  T
Q  268 taccaa 273  Q
    ||||||    
T  48525596 taccaa 48525591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 31662357 - 31662313
Alignment:
Q  191 aaattcatcttaaaaatgaataagtgagatgtatggggtttgaac 235  Q
    |||||||| |||||||||||||| |||||||||||| ||| ||||    
T  31662357 aaattcattttaaaaatgaataaatgagatgtatggagttcgaac 31662313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 29321952 - 29322078
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| ||||||||| |||||| || |||||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  29321952 gtcaagtagtctagtggctagagaaattcaccttaaagataaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatccct 29322051  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||||||||| ||||    
T  29322052 taccaaatgatctaagttcatgaggac 29322078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 168 - 295
Target Start/End: Original strand, 6228236 - 6228363
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| |||||||||||||||||||||||    
T  6228236 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 6228335  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    |||||||||| ||||| |||||||||||    
T  6228336 taccaaatgagctaagctcatggggaca 6228363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 18903343 - 18903469
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| ||||||||||||| |||||||||    
T  18903343 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgtattatccct 18903442  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    | |||||||| ||||| ||||||||||    
T  18903443 tgccaaatgagctaagctcatggggac 18903469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 24794882 - 24794991
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||  |||||| ||| |||| ||| |||||||||||||||||||||||||||||||||     
T  24794882 tagtggctagagaaattcatcttaaatatgaataagtgggatgtccggggttcgaatcccaacccctgcacatattgtgcattatcccttaccaaatgag 24794981  T
Q  279 ctaagttcat 288  Q
    ||||| ||||    
T  24794982 ctaagctcat 24794991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 168 - 293
Target Start/End: Original strand, 20415538 - 20415663
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||| ||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||  |||| |||||||||||||||||||||||    
T  20415538 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccctggcccctgcacatattgtgcattatccct 20415637  T
Q  268 taccaaatgaactaagttcatgggga 293  Q
    ||| |||||| ||||  |||||||||    
T  20415638 tacaaaatgagctaaactcatgggga 20415663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 171 - 274
Target Start/End: Original strand, 7954901 - 7955004
Alignment:
Q  171 aagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttac 270  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||| |||||  |||||| | ||| |  ||| ||||||||||||||||||||||||||    
T  7954901 aagtagcctagtggctagagaaattcatcttaaagatgaataagtgggatgttcggggttcgcacctcgccccctgcacatattgtgcattatcccttac 7955000  T
Q  271 caaa 274  Q
    ||||    
T  7955001 caaa 7955004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 4854282 - 4854412
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  |||||| || ||||||| | |||||| ||||||||||| | |||  |||||| ||||||| |||| |||||| ||||| ||||||||||    
T  4854282 gtcaagtaggctagtggttagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacacattgtacattatccct 4854381  T
Q  268 taccaaatgaactaagttcatggggacaatt 298  Q
    | |||||||| ||||| ||||||||||||||    
T  4854382 tgccaaatgagctaagctcatggggacaatt 4854412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 15716984 - 15717115
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatg------gggtttgaaccccagcccttgcacatattgtgcatt 261  Q
    ||||| |||| ||||||||| ||||||||| ||||||| |||||||||||| |||  |      ||||| ||||||| |||| |||||||||||||||||    
T  15716984 gtcaaatagcctagtggctagagaaattcaccttaaaa-tgaataagtgaggtgtccgtgcccggggttcgaaccccggcccctgcacatattgtgcatt 15717082  T
Q  262 atcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||||||| ||||| ||||||||||    
T  15717083 atcccttaccaaatgagctaagctcatggggac 15717115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 168 - 292
Target Start/End: Complemental strand, 17217077 - 17216953
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  || ||| |||| ||  ||| | |||||||| ||||||||||||    
T  17217077 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaactccgacccctacacatattatgcattatccct 17216978  T
Q  268 taccaaatgaactaagttcatgggg 292  Q
    |||||||||| ||||| ||||||||    
T  17216977 taccaaatgagctaagctcatgggg 17216953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 19748217 - 19748103
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||  | ||||||||| ||||||| |||||||||| | |||  | |||| ||||||||  || |||||||||||||||||||||||    
T  19748217 gtcaagtagcctagtggtcagagaaattcaccttaaaa-tgaataagtggggtgtccgtggttcgaaccccaatccctgcacatattgtgcattatccct 19748119  T
Q  268 taccaaatgaactaag 283  Q
    |||||||||| |||||    
T  19748118 taccaaatgagctaag 19748103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 25045863 - 25045737
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatg----gggtttgaaccccagcccttgcacatattgtgcattat 263  Q
    |||||||||| |||||| || | |||||||  ||||  ||||||||||||| ||| ||    | ||||||||| |||||| ||||||||||||| |||||    
T  25045863 gtcaagtagcctagtggttagaaaaattcacgttaatgatgaataagtgaggtgtctgtctggagtttgaacctcagcccctgcacatattgtgaattat 25045764  T
Q  264 cccttaccaaatgaactaagttcatgg 290  Q
    |||||||||||||| ||||| ||||||    
T  25045763 cccttaccaaatgagctaagctcatgg 25045737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 298
Target Start/End: Complemental strand, 11552990 - 11552860
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| | ||||| | |||||| ||||||||||| | ||  ||||||| ||||||| |||| |||||| ||||| | ||||||||    
T  11552990 gtcaagtagactagtggctagaaaaatttaccttaaagatgaataagtggggtgcctggggttcgaaccccggcccctgcacacattgtacgttatccct 11552891  T
Q  268 taccaaatgaactaagttcatggggacaatt 298  Q
    | |||||||| ||||| | | ||||||||||    
T  11552890 tgccaaatgagctaagcttaaggggacaatt 11552860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 296
Target Start/End: Original strand, 18618538 - 18618643
Alignment:
Q  190 gaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatg 289  Q
    |||||||| |||||| ||||||||||| | |||  ||| || |||||||| |||||  |||||||||||||||||  ||||||||||| ||||| |||||    
T  18618538 gaaattca-cttaaagatgaataagtggggtgtccgggattcgaaccccaacccttatacatattgtgcattatcttttaccaaatgagctaagctcatg 18618636  T
Q  290 gggacaa 296  Q
    |||||||    
T  18618637 gggacaa 18618643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 21874232 - 21874306
Alignment:
Q  203 aaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    |||||||||||||||| |||  ||| || |||| || |||| |||||||||||||||||||||||||||||||||    
T  21874232 aaaatgaataagtgaggtgttcgggattcgaactcctgcccatgcacatattgtgcattatcccttaccaaatga 21874306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 1128392 - 1128518
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatga---ataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatc 264  Q
    |||||||||  ||||| ||| ||||||||| |||||| ||||   |||| || | ||| ||||||| |||||||| ||| |||||||||| |||||||||    
T  1128392 gtcaagtagtctagtgactagagaaattcaccttaaagatgatgaataaatggggtgtctggggttcgaaccccaacccctgcacatattatgcattatc 1128491  T
Q  265 ccttaccaaatgaactaagttcatggg 291  Q
    ||||| |||||||  |||| |||||||    
T  1128492 ccttatcaaatgagttaaggtcatggg 1128518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 30422084 - 30422207
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||| | ||||||||| ||||||||| ||||| || | |||  || ||| ||||||   ||| | |||||||||| ||||||||||    
T  30422084 gtcaagtagcctagtggccagagaaattcaccttaaaaataaataaatgtggtgtccggagttcgaacccggacccctacacatattgtacattatccct 30422183  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    ||||||||||  |||| |||||||    
T  30422184 taccaaatgagttaagctcatggg 30422207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 31703704 - 31703811
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||| | ||| ||||||||||||||||||||||| |||||||||||| |||  |||||| ||||| || |||  | | ||| | |||||||||| |    
T  31703704 gtcaagtaacctagcggctaaagaaattcatcttaaaagtgaataagtgaggtgttaggggttcgaacctcaaccccagtatataatatgcattatcctt 31703803  T
Q  268 taccaaat 275  Q
    ||||||||    
T  31703804 taccaaat 31703811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 9357254 - 9357166
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    ||||||||| ||||||  ||||||| | || ||| ||| ||| |||||||||||| |||||| ||||| |||||||||||| |||||||    
T  9357254 agaaattcaccttaaaggtgaataaattaggtgtctggagttcgaaccccagcccctgcacaaattgtacattatcccttatcaaatga 9357166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 7929072 - 7929151
Alignment:
Q  190 gaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctta 269  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||| || | |  |||| ||||| || |||||||||||    
T  7929072 gaaattcatctttaaagtgaataagtgggatgtatggggtttgaactccggtctctgcatatattatgtattatccctta 7929151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 19221808 - 19221710
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    ||||||||| ||||||||| |||||||||||| || || | ||| ||| ||| ||||| |||||| ||||||| || |||||||| | | |||||||||    
T  19221808 tagtggctagagaaattcaccttaaaaatgaacaaatggggtgtctggagttcgaacctcagcccctgcacatgttatgcattattcttcaccaaatga 19221710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 11611401 - 11611354
Alignment:
Q  245 tgcacatatt-gtgcattatcccttaccaaatgaactaagttcatggg 291  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  11611401 tgcacatatttgtgcattgtcccttaccaaatgaactaagctcatggg 11611354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 1032677 - 1032564
Alignment:
Q  180 agtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaac 279  Q
    |||||||| ||||||||| |||||| ||||||||||| | ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |    
T  1032677 agtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagc 1032578  T
Q  280 taagttcatgggga 293  Q
    |||| |||||||||    
T  1032577 taagctcatgggga 1032564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 38289211 - 38289339
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||| || |||| |||||||  ||| |||||||||||||||||||||||    
T  38289211 gtcaagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtttgaggttcgaaccccgacccctgcacatattgtgcattatccct 38289310  T
Q  268 taccaaatgaactaagttcatggggacaa 296  Q
    |||||||||| ||||| | ||||| ||||    
T  38289311 taccaaatgagctaagcttatgggaacaa 38289339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 295
Target Start/End: Original strand, 44828408 - 44828536
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaa-atgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccc 266  Q
    |||||||||  || |||||||||||||||| ||||||| ||||||||||| | ||| ||||||| ||||||||| || |||||| |||||||||||||||    
T  44828408 gtcaagtagtctaatggctaaagaaattcaccttaaaagatgaataagtgtggtgtctggggttcgaaccccagaccctgcacaaattgtgcattatccc 44828507  T
Q  267 ttaccaaatgaactaagttcatggggaca 295  Q
    ||||||||||| ||||| |||||||||||    
T  44828508 ttaccaaatgagctaagctcatggggaca 44828536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 168 - 295
Target Start/End: Complemental strand, 4259978 - 4259851
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| |  ||  |||||| ||||||| |||| |||||||||||||||||||||||    
T  4259978 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggagtccggggttggaaccccggcccctgcacatattgtgcattatccct 4259879  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    ||||||||||  |||| ||||| |||||    
T  4259878 taccaaatgagttaagctcatgcggaca 4259851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 41454816 - 41454931
Alignment:
Q  181 gtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaact 280  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||  |||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||    
T  41454816 gtggctagagaaattcacattaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagct 41454915  T
Q  281 aagttcatggggacaa 296  Q
    ||| ||||||||||||    
T  41454916 aagctcatggggacaa 41454931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 43413862 - 43413969
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | ||| |||| || |||||||||||| |||||| ||||||||||||||||    
T  43413862 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttgggattcgaaccccagcccctgcacaaattgtgcattatccct 43413961  T
Q  268 taccaaat 275  Q
    ||| ||||    
T  43413962 tacaaaat 43413969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 5904350 - 5904464
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||| ||||||||| |||| |||||||||||||||| ||||||||||| |||||  |||||| |||||||  ||| ||||||||||||||||||||  |    
T  5904350 gtcaaatagcttagtagctagagaaattcatcttaaagatgaataagtgggatgtccggggttcgaaccccgtcccctgcacatattgtgcattatcttt 5904449  T
Q  268 taccaaatgaactaa 282  Q
    |||||||||| ||||    
T  5904450 taccaaatgagctaa 5904464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 30466766 - 30466668
Alignment:
Q  200 ttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggacaatt 298  Q
    ||||| ||||||||||| | ||| || |||| |||||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  30466766 ttaaagatgaataagtggggtgtctgaggttcgaaccccagcccctgcacatattgtgcattagcccttaccaaatgagctaagctcatggggacaatt 30466668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 38064084 - 38063968
Alignment:
Q  180 agtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaac 279  Q
    ||||| || ||||||||| |||||| ||||||||||| | ||| |||||||  | |||||| || |||||| |||||||||||||||||||||||||||     
T  38064084 agtggttagagaaattcaccttaaagatgaataagtggggtgtctggggttcaacccccagtccctgcacaaattgtgcattatcccttaccaaatgaat 38063985  T
Q  280 taagttcatggggacaa 296  Q
    |||| ||||||||||||    
T  38063984 taagctcatggggacaa 38063968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 1360111 - 1360231
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||||| || ||||||||| ||| |||||||||||||| | |||  |||||| |||||||||||| | ||||||||||||||||||| |    
T  1360111 gtcaagtagcctagtggttagagaaattca-ctttaaaatgaataagtggggtgtccggggttcgaaccccagcccctacacatattgtgcattatcctt 1360209  T
Q  268 taccaaatgaactaagttcatg 289  Q
    | |||||||| ||||| |||||    
T  1360210 tgccaaatgagctaagctcatg 1360231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 13906597 - 13906728
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatg------gggtttgaaccccagcccttgcacatattgtgcatt 261  Q
    ||||| |||| ||||||||| ||||||||| ||||||| |||||||||||| |||  |      ||||| ||||||| |||| |||||||||||||||||    
T  13906597 gtcaaatagcctagtggctagagaaattcaccttaaaa-tgaataagtgaggtgtccgtgcccggggttcgaaccccggcccctgcacatattgtgcatt 13906695  T
Q  262 atcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||||||| ||||| ||||||||||    
T  13906696 atcccttaccaaatgagctaagctcatggggac 13906728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 168 - 298
Target Start/End: Complemental strand, 23139195 - 23139063
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaa--aaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcc 265  Q
    ||||||||||| |||| ||| ||||||||| |||||  ||||||||||||| | ||| ||| ||| ||||| | |||| |||||| ||||||||||||||    
T  23139195 gtcaagtagctcagtgactagagaaattcaccttaataaaatgaataagtggggtgtctggtgttcgaacctcggcccctgcacacattgtgcattatcc 23139096  T
Q  266 cttaccaaatgaactaagttcatggggacaatt 298  Q
    |||  ||||||| ||||| ||||||||||||||    
T  23139095 cttgtcaaatgagctaagctcatggggacaatt 23139063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 179 - 296
Target Start/End: Original strand, 41845416 - 41845533
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    ||||||||||||||||||| |||||| |||||||| |  | |||  |||||| |||||||   || |||||||||||||||||||||||||||||||||     
T  41845416 tagtggctaaagaaattcaccttaaagatgaataaatagggtgttcggggttcgaaccccgatccctgcacatattgtgcattatcccttaccaaatgag 41845515  T
Q  279 ctaagttcatggggacaa 296  Q
    ||||| |||||| |||||    
T  41845516 ctaagctcatggagacaa 41845533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 19733045 - 19733171
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||||||||||| || ||||||||| |||||| |||||||| | || |||  ||| || |||||||  ||| |||| ||||| ||||||||||||    
T  19733045 gtcaagtagcttagtggttagagaaattcaccttaaagatgaataatttaggtgttcgggattcgaaccccgacccctgcatatattatgcattatccct 19733144  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| | ||||||||    
T  19733145 taccaaatgagctaagcttatggggac 19733171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 22652802 - 22652680
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||||||||||||| ||||||||| ||| || |||||||| || | |||  |||||| |||| || |||| |||||| ||| ||||||||||||    
T  22652802 gtcaagtagcttagtggctagagaaattcacctttaacatgaataattggggtgtccggggttcgaacaccggcccctgcacaaattatgcattatccct 22652703  T
Q  268 taccaaatgaactaagttcatgg 290  Q
    || ||||||| ||||| ||||||    
T  22652702 tatcaaatgagctaagctcatgg 22652680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 39104725 - 39104612
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| |||||| || |||||| ||||||||||| | |||  |||||| ||||||| |||  |||||||||||||||||||||||    
T  39104725 gtcaagtagtctagtggctagagaaatccaccttaaagatgaataagtggg-tgtccggggttcgaaccccggccgctgcacatattgtgcattatccct 39104627  T
Q  268 taccaaatgaactaa 282  Q
    |||||||||| ||||    
T  39104626 taccaaatgagctaa 39104612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 36103929 - 36104007
Alignment:
Q  199 cttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    |||||| ||||||||||| | ||| ||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||    
T  36103929 cttaaagatgaataagtggggtgtttggggttcgaaccccggcccctgcacatattgtgcattatcctttaccaaatga 36104007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 36587626 - 36587752
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||  |||||||||||||||| || |||||||| | |||  |||||| |||||||  ||| | |||||||||||  ||||| ||    
T  36587626 gtcaagtagcctagtggctcgagaaattcatcttaaagataaataagtggggtgttcggggttggaaccccgacccctacacatattgtgttttatctct 36587725  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    ||||||||||  |||| ||||||||||    
T  36587726 taccaaatgagttaagctcatggggac 36587752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 10162026 - 10161957
Alignment:
Q  225 ggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  10162026 ggggttcgaaccccaacccctgcacatattgtgcattatcccttaccagatgagctaagctcatggggac 10161957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 43456663 - 43456743
Alignment:
Q  203 aaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaag 283  Q
    |||||||||||||| | |||  |||||| |||||||  ||||| || |||||||||||||||||||||||||||| |||||    
T  43456663 aaaatgaataagtggggtgtccggggttcgaaccccgacccttacatatattgtgcattatcccttaccaaatgagctaag 43456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Original strand, 279994 - 280081
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    ||||||||| ||||||||||||||| |  | |||  |||||| |||||| | |||| ||||||||||| ||||||||||||||||||||    
T  279994 agaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccct-gcacatattgtacattatcccttaccaaatga 280081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 635858 - 635771
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    ||||||||| ||||||||||||||| |  | |||  |||||| |||||| | |||| ||||||||||| ||||||||||||||||||||    
T  635858 agaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccct-gcacatattgtacattatcccttaccaaatga 635771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 821661 - 821574
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    ||||||||| ||||||||||||||| |  | |||  |||||| |||||| | |||| ||||||||||| ||||||||||||||||||||    
T  821661 agaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccct-gcacatattgtacattatcccttaccaaatga 821574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 29114149 - 29114093
Alignment:
Q  240 gcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggacaa 296  Q
    |||| |||||| |||||||||||||||||| ||||||| ||||||||||||| ||||    
T  29114149 gcccctgcacaaattgtgcattatcccttatcaaatgagctaagttcatgggaacaa 29114093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 8349459 - 8349574
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  |||||| || | |||||||||||||| ||||||||||| | |||  || ||| |||| || |||| |||| ||||| || |||||| ||    
T  8349459 gtcaagtagtctagtggttagataaattcatcttaaagatgaataagtggggtgttcggagttcgaactccggcccctgcatatattctgtattatcact 8349558  T
Q  268 taccaaatgaactaag 283  Q
    |||||||||| |||||    
T  8349559 taccaaatgagctaag 8349574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 8350556 - 8350429
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaa-atgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccc 266  Q
    |||||||||  |||||| || | ||||||||||||||| ||||||||||| | |||  | |||| |||| || |||| |||| |||||||| |||||| |    
T  8350556 gtcaagtagtctagtggttagataaattcatcttaaaagatgaataagtggggtgtccgaggttcgaactccggcccctgcatatattgtgtattatcac 8350457  T
Q  267 ttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||  |||| | ||||||||    
T  8350456 ttaccaaatgagttaagcttatggggac 8350429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 34037924 - 34038031
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  |||||| || | |||||||  ||||| ||||||||||| ||||| |||| || |||| ||  ||| ||||||||||||| |||||||||    
T  34037924 gtcaagtagtctagtggttagaaaaattcactttaaagatgaataagtgggatgtctgggattcgaactccgccccctgcacatattgtgtattatccct 34038023  T
Q  268 taccaaat 275  Q
    || |||||    
T  34038024 tatcaaat 34038031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 11052560 - 11052669
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||| | ||||||||| ||||||||| |||||| ||||||||||| | ||| | |||||   |||   |||| ||||||   ||||||||||||||    
T  11052560 gtcaagtaacctagtggctagagaaattcaccttaaagatgaataagtggggtgtttagggttcacaccttggcccctgcacaatatgtgcattatccct 11052659  T
Q  268 taccaaatga 277  Q
    ||||||||||    
T  11052660 taccaaatga 11052669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 38544901 - 38545009
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||| ||||||| || |||||| || |||||| || |||||||| | |||  ||| || ||||||    || |||||||||||||||||||||||    
T  38544901 gtcaagtagtttagtggttagagaaatccaccttaaagataaataagtggg-tgttcgggattcgaaccctgatccatgcacatattgtgcattatccct 38544999  T
Q  268 taccaaatga 277  Q
    ||||||||||    
T  38545000 taccaaatga 38545009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 12831646 - 12831562
Alignment:
Q  211 taagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggaca 295  Q
    |||||| ||||| |||| || |||| |||| || ||||||||||||||||| ||| |||||||||||  |||  |||||||||||    
T  12831646 taagtgggatgtctgggattcgaactccagaccctgcacatattgtgcattgtcctttaccaaatgagttaaactcatggggaca 12831562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 19957300 - 19957416
Alignment:
Q  171 aagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttac 270  Q
    ||||||| |||  |||| ||||||||| ||||||  |||||||||| | |||  |||||| ||||| |  ||| |||| ||| | |||||||||||||||    
T  19957300 aagtagcctagctgctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatcccttac 19957399  T
Q  271 caaatgaactaagttca 287  Q
    ||| ||| |||||||||    
T  19957400 caagtgagctaagttca 19957416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 45536826 - 45536714
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    ||||||||| |||||||||   | || ||||||||||| | |||  |||||| |||| || |||| |||||| ||| |||||||||||||| |||||||     
T  45536826 tagtggctagagaaattcactattaagatgaataagtggggtgtccggggttcgaactccggcccctgcacaaattttgcattatcccttatcaaatgac 45536727  T
Q  279 ctaagttcatggg 291  Q
    ||||  |||||||    
T  45536726 ctaacctcatggg 45536714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 3311558 - 3311436
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||| || |||||| | ||||||||||| || ||||||||||| | |||  |||||| ||||||    || |||| | ||||| |||||||||||    
T  3311558 tcaagtagcatactggctagaaaaattcatctttaagatgaataagtggggtgtccggggttcgaaccctgatccctgcataaattgtacattatccctt 3311459  T
Q  269 accaaatgaactaagttcatggg 291  Q
     ||||||||  |||| |||||||    
T  3311458 gccaaatgagttaagctcatggg 3311436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 10201380 - 10201267
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||||||  ||||| |||||||||  |||||  ||||||| |||| |||  |||||| |||||||  ||| | || ||||| ||||||||| |||    
T  10201380 tcaagtagcttaacggctagagaaattcactttaaaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatatattatgcattatctctt 10201281  T
Q  269 accaaatgaactaa 282  Q
    ||||| | ||||||    
T  10201280 accaactaaactaa 10201267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 16973105 - 16973032
Alignment:
Q  204 aaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatga 277  Q
    ||||||||||||  |||||  || ||| |||| ||  ||| ||||||||||||||||||||||||| |||||||    
T  16973105 aaatgaataagtaggatgtccggagttcgaacaccgacccctgcacatattgtgcattatcccttaacaaatga 16973032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 40103583 - 40103526
Alignment:
Q  226 gggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaag 283  Q
    ||||| ||||| |||||| |||  |||||||||||||||||||| ||||||| |||||    
T  40103583 gggttcgaacctcagcccctgcttatattgtgcattatcccttatcaaatgagctaag 40103526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 32822147 - 32822107
Alignment:
Q  256 tgcattatcccttaccaaatgaactaagttcatggggacaa 296  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  32822147 tgcattatcccttaccaaatgagttaagctcatggggacaa 32822107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 168 - 295
Target Start/End: Original strand, 15470597 - 15470724
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||| |||||||||| ||||||||| |||||| |||||||| || | ||| ||||||| ||| | ||||||||||||||||||||||||||||||    
T  15470597 gtcaagtagtttagtggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaatctcagcccttgcacatattgtgcattatccct 15470696  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    ||||||||||| |||| |||| ||||||    
T  15470697 taccaaatgaattaagctcatagggaca 15470724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 168 - 293
Target Start/End: Complemental strand, 31250266 - 31250141
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||| ||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| |||||||||||||||||||||||    
T  31250266 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 31250167  T
Q  268 taccaaatgaactaagttcatgggga 293  Q
    |||||||||| ||||| |||||||||    
T  31250166 taccaaatgagctaagctcatgggga 31250141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 38503233 - 38503361
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  || |||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| |||||||||||||||||||||||    
T  38503233 gtcaagtagtctattggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 38503332  T
Q  268 taccaaatgaactaagttcatggggacaa 296  Q
    |||||||||| ||||| ||||||||||||    
T  38503333 taccaaatgagctaagctcatggggacaa 38503361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 177 - 293
Target Start/End: Complemental strand, 43227976 - 43227860
Alignment:
Q  177 cttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatg 276  Q
    ||||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  43227976 cttagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatg 43227877  T
Q  277 aactaagttcatgggga 293  Q
    | ||||| |||| ||||    
T  43227876 agctaagctcataggga 43227860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 168 - 295
Target Start/End: Original strand, 930914 - 931041
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||| |||||| ||| ||||||||| ||| || ||||||||||| ||||| || |||| |||||||| ||| ||||||||||||||||| |||||    
T  930914 gtcaagtagtttagtgactagagaaattcacctttaagatgaataagtgggatgtctgaggttcgaaccccaacccctgcacatattgtgcattgtccct 931013  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    |||| ||||| ||| | |||||||||||    
T  931014 taccgaatgagctatgctcatggggaca 931041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 42209035 - 42208913
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||| ||| ||||||||| |||||| ||||||||||||| |||  || ||| ||||| | ||||| |||||||||||| |||||||||    
T  42209035 gtcaagtagcctagtgactagagaaattcaccttaaagatgaataagtgaggtgtccggagttcgaacctcggccct-gcacatattgtgtattatccct 42208937  T
Q  268 taccaaatgaactaagttcatggg 291  Q
    ||| |||||| ||||| |||||||    
T  42208936 tactaaatgagctaagctcatggg 42208913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 12375383 - 12375514
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatg------gggtttgaaccccagcccttgcacatattgtgcatt 261  Q
    ||||| |||| ||||||||| ||||||||| ||||||| |||||||||||| |||  |      ||||| ||||||| |||| |||||||||||||||||    
T  12375383 gtcaaatagcctagtggctagagaaattcaccttaaaa-tgaataagtgaggtgtccgtgcccggggttcgaaccccggcccctgcacatattgtgcatt 12375481  T
Q  262 atcccttaccaaatgaactaagttcatggggac 294  Q
    |||| ||||||||||| ||||| ||||||||||    
T  12375482 atccattaccaaatgagctaagctcatggggac 12375514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 168 - 288
Target Start/End: Complemental strand, 17077480 - 17077360
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| | ||||||| ||| || ||||||||||| | |||  |||||| ||| |||  ||| |||||| ||||||||||||||||    
T  17077480 gtcaagtagcctagtggctagataaattcacctttaagatgaataagtggggtgtccggggttcgaatcccgacccctgcacaaattgtgcattatccct 17077381  T
Q  268 taccaaatgaactaagttcat 288  Q
    |||||||||| ||||| ||||    
T  17077380 taccaaatgagctaagctcat 17077360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 5263288 - 5263173
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| |||||||| || | ||| | ||||| ||||  || ||| | ||||||||||||||||||| |    
T  5263288 gtcaagtagcctagtggctagagaaattcagcttaaagatgaataaatgtggtgtctcgggttcgaacatcaccccctacacatattgtgcattatccat 5263189  T
Q  268 taccaaatgaactaag 283  Q
    |||||||||| |||||    
T  5263188 taccaaatgagctaag 5263173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 5039799 - 5039674
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| ||||||| | |||||| ||||||||||| | |||  |  ||| ||||||| ||||||||||||||||| |||||| |||    
T  5039799 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccgaagttcgaaccccggcccttgcacatattgtacattat-cct 5039701  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    ||||||||||  |||| ||||||||||    
T  5039700 taccaaatgagttaagctcatggggac 5039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 297
Target Start/End: Complemental strand, 87888 - 87781
Alignment:
Q  190 gaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatg 289  Q
    |||||||| ||||||||||||||  || | ||| ||| ||| |||| ||  |||||||| ||||||||||||||||||||||||||||  | || |||||    
T  87888 gaaattcaccttaaaaatgaatagttggggtgtctggagttcgaactccgacccttgcatatattgtgcattatcccttaccaaatgagttgagctcatg 87789  T
Q  290 gggacaat 297  Q
    ||||||||    
T  87788 gggacaat 87781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 275
Target Start/End: Original strand, 15106864 - 15106970
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    |||||||| ||||||| || ||||||| || ||||| ||||||||||| | |||  |||||| |||||||  ||  |||||| |||||||||||||||||    
T  15106864 tcaagtagtttagtggttagagaaatttattttaaagatgaataagtggggtgtccggggttcgaaccccgacctctgcacaaattgtgcattatccctt 15106963  T
Q  269 accaaat 275  Q
    |||||||    
T  15106964 accaaat 15106970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 1572228 - 1572115
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||  ||||||||| ||||||||| ||| || ||||||||||| |  ||  |||||| |||||||||||| |||||| | ||||||| |||||||    
T  1572228 tcaagtagtctagtggctagagaaattcacctttaagatgaataagtggggagtccggggttcgaaccccagcccctgcacaaaatgtgcataatccctt 1572129  T
Q  269 accaaatgaactaa 282  Q
    | ||||||| ||||    
T  1572128 aacaaatgagctaa 1572115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 462067 - 461999
Alignment:
Q  226 gggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    ||||| |||||| ||| | | |||||||||||||||| |||||||||||||| |||||||||| |||||    
T  462067 gggttcgaaccctagctcctacacatattgtgcattaccccttaccaaatgagctaagttcatagggac 461999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 42643856 - 42643888
Alignment:
Q  245 tgcacatattgtgcattatcccttaccaaatga 277  Q
    |||||||||||||||||||||||||||||||||    
T  42643856 tgcacatattgtgcattatcccttaccaaatga 42643888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 1984249 - 1984293
Alignment:
Q  252 attgtgcattatcccttaccaaatgaactaagttcatggggacaa 296  Q
    ||||||||||||||||||||||||||  |||| ||||| ||||||    
T  1984249 attgtgcattatcccttaccaaatgagttaagctcatgtggacaa 1984293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 42902041 - 42902089
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtg 216  Q
    ||||||||| |||||||||| ||||||| | |||||| |||||||||||    
T  42902041 gtcaagtagtttagtggctagagaaatttaccttaaagatgaataagtg 42902089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 419831 - 419705
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  |||||| ||||||| |||| |||||||||||| ||||||||||    
T  419831 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgttcattatccct 419732  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| ||||||||||    
T  419731 taccaaatgagctaagctcatggggac 419705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 34107613 - 34107488
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  ||| |||||||||   ||| |||||||||||||||||||||||    
T  34107613 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg-tttgaaccctgacccctgcacatattgtgcattatccct 34107515  T
Q  268 taccaaatgaactaagttcatggggac 294  Q
    |||||||||| ||||| |||| |||||    
T  34107514 taccaaatgagctaagctcatagggac 34107488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 171 - 292
Target Start/End: Original strand, 18424131 - 18424249
Alignment:
Q  171 aagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttac 270  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||| |||||  || ||| ||||||| |||| |||||||||||||||||   ||||||    
T  18424131 aagtagcctagtggctagagaaattcaccttaaagatgaataagtgggatgtccggagttcgaaccccggcccctgcacatattgtgcatt---ccttac 18424227  T
Q  271 caaatgaactaagttcatgggg 292  Q
    ||||||| ||||| ||||||||    
T  18424228 caaatgagctaagctcatgggg 18424249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 5901808 - 5901915
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||| ||||||||||||||||||| ||| || ||||||||||| | |||  |||||||| ||||| |||| |||| | |||||||||||||||||    
T  5901808 tcaagtagcctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggggtttgtaccccggcccctgcagaaattgtgcattatccctt 5901907  T
Q  269 accaaatg 276  Q
    ||| ||||    
T  5901908 acctaatg 5901915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 298
Target Start/End: Complemental strand, 41750065 - 41749936
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||| | |||  ||||||  ||||||  ||| | |||| ||||||||||||||||    
T  41750065 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtg-ggtgtccggggttcaaaccccgacccctacacacattgtgcattatccct 41749967  T
Q  268 taccaaatgaactaagttcatggggacaatt 298  Q
    | |||||||| || || ||||||||||||||    
T  41749966 tgccaaatgagcttagctcatggggacaatt 41749936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 293
Target Start/End: Original strand, 31149078 - 31149202
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||||||||  ||||| || ||||||||| |||||| || || ||||| | ||| ||||||| ||||| || |||| ||||||||||||||||||||||    
T  31149078 gtcaagtagccaagtggttagagaaattcaccttaaagattaaaaagtggggtgtctggggttcgaacctcaaccct-gcacatattgtgcattatccct 31149176  T
Q  268 taccaaatgaactaagttcatgggga 293  Q
    |||||||||| ||| | |||||||||    
T  31149177 taccaaatgagctatgctcatgggga 31149202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 293
Target Start/End: Complemental strand, 43027274 - 43027149
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  ||||||||| ||||||||| ||||||  ||||||| || | ||| ||||||| ||||| |||| |  ||||| ||||||||||||||||    
T  43027274 gtcaagtagtctagtggctagagaaattcaccttaaaggtgaataaatggggtgtctggggttcgaacctcagcacccgcacaaattgtgcattatccct 43027175  T
Q  268 taccaaatgaactaagttcatgggga 293  Q
    || ||||||| ||||| |||||||||    
T  43027174 tatcaaatgagctaagctcatgggga 43027149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 33482639 - 33482743
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    |||||||||||||||| ||||||||||| | ||| || |||| ||||| | | || |||| ||||||||||| || ||||||||||||| ||||||||||    
T  33482639 agaaattcatcttaaagatgaataagtggggtgtctgaggttcgaaccacggtccctgcatatattgtgcatcattccttaccaaatgagctaagttcat 33482738  T
Q  289 gggga 293  Q
    |||||    
T  33482739 gggga 33482743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 295
Target Start/End: Original strand, 3330177 - 3330304
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    ||||| ||||||||||| || ||||||||| |||||| ||||||||||| | |||  |||||| |||| ||  ||  |||||||||||||||||||||||    
T  3330177 gtcaaatagcttagtggttagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccgacctctgcacatattgtgcattatccct 3330276  T
Q  268 taccaaatgaactaagttcatggggaca 295  Q
    ||| ||||||  ||||  ||||||||||    
T  3330277 tactaaatgagttaagcacatggggaca 3330304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 25553122 - 25553247
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggg-gtttgaaccccagcccttgcacatattgtgcattatccc 266  Q
    ||||||||  ||||||| || |||||||||||||||| ||||||||||| || ||||  | ||| ||||||||  |  ||||||||||||||||||||||    
T  25553122 gtcaagtaatttagtggttagagaaattcatcttaaagatgaataagtg-ga-gtatctgagttcgaaccccaatctctgcacatattgtgcattatccc 25553219  T
Q  267 ttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||| |||| ||||||||||    
T  25553220 ttaccaaatgaattaagctcatggggac 25553247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 171 - 297
Target Start/End: Original strand, 19843342 - 19843468
Alignment:
Q  171 aagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttac 270  Q
    ||||||| |||| |||| ||||||||| |||||| ||||||||||||| ||| | ||||| ||||||   ||| |||||||||||| ||| |||||||||    
T  19843342 aagtagcctagtagctagagaaattcaccttaaagatgaataagtgaggtgtctagggttcgaaccctgacccctgcacatattgtacatcatcccttac 19843441  T
Q  271 caaatgaactaagttcatggggacaat 297  Q
     ||||||  |||| ||||| |||||||    
T  19843442 gaaatgagttaagctcatgaggacaat 19843468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 6866627 - 6866518
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||  || |||||||||||||||| |||||| || |||||||||| |||  ||| || |||| || |  | |||||||||||||||||||||||    
T  6866627 gtcaagtagtctactggctaaagaaattcaccttaaagataaataagtgaggtgtccgggattcgaactccggttcctgcacatattgtgcattatccct 6866528  T
Q  268 taccaaatga 277  Q
    ||||||||||    
T  6866527 taccaaatga 6866518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 168 - 288
Target Start/End: Original strand, 33065233 - 33065353
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||||||||| ||||||||| |||||| ||||||||||  | |||  || ||| |||||||  ||| | |||| ||||||||||||||||    
T  33065233 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtagggtgttcggagttcgaaccccgacccctacacacattgtgcattatccct 33065332  T
Q  268 taccaaatgaactaagttcat 288  Q
    | |||||||| ||||| ||||    
T  33065333 tgccaaatgagctaagctcat 33065353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 17543066 - 17543173
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||||| || ||||| |||  ||||| ||||||||||| | |||  || ||| |||| || |||| |||||||||||||||||||||||    
T  17543066 gtcaagtagcctagtggttagagaaagtcacattaaagatgaataagtggggtgtccggcgttcgaactccggcccctgcacatattgtgcattatccct 17543165  T
Q  268 taccaaat 275  Q
    ||||||||    
T  17543166 taccaaat 17543173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 40203256 - 40203381
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||  ||||||||| ||||||  | |||||||||||||||||| | | | |||||||  |||||   ||||| |||||||||| |||||||||||    
T  40203256 tcaagtagtctagtggctagagaaatctaccttaaaaatgaataagtggggtatctggggttcaaaccctgacccttacacatattgtacattatccctt 40203355  T
Q  269 accaaatgaactaagttcatggggac 294  Q
    ||| ||||| ||||| ||||| ||||    
T  40203356 accgaatgagctaagctcatgaggac 40203381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 16403572 - 16403522
Alignment:
Q  240 gcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatgg 290  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  16403572 gcccctgcacatattgtgcattatcccttaccaaatgagctaagctcatgg 16403522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 11069379 - 11069448
Alignment:
Q  226 gggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggaca 295  Q
    ||||| ||||||||  || ||||||||||||||||||| ||||||||||||| ||||| ||||| |||||    
T  11069379 gggttcgaaccccaaaccctgcacatattgtgcattattccttaccaaatgagctaagctcatgcggaca 11069448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 179 - 298
Target Start/End: Original strand, 27463514 - 27463632
Alignment:
Q  179 tagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaa 278  Q
    |||||| || |||||||||  ||||| ||||||||||| | | | |||| || ||| ||| || | |||| |||||||||||||| |||||||||||||     
T  27463514 tagtggttagagaaattcactttaaagatgaataagtgggttatctggg-ttcgaatcccggctcctgcatatattgtgcattattccttaccaaatgag 27463612  T
Q  279 ctaagttcatggggacaatt 298  Q
    ||||| |||||| |||||||    
T  27463613 ctaagctcatggagacaatt 27463632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 5207211 - 5207149
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtt 230  Q
    |||||||||  ||||||||||||||||||||||||||  |||||||||| | ||| |||||||    
T  5207211 gtcaagtagtctagtggctaaagaaattcatcttaaaggtgaataagtggggtgtctggggtt 5207149  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 32084923 - 32084841
Alignment:
Q  209 aataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggg 291  Q
    ||||||||||||||  |||||| ||||||| |||| | || ||| | |||||| ||||||||||||||| ||||| |||||||    
T  32084923 aataagtgagatgttcggggttcgaaccccggcccctacatataatatgcattgtcccttaccaaatgagctaagctcatggg 32084841  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 294
Target Start/End: Complemental strand, 20435879 - 20435774
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    ||||||||| |||||| ||||||||||| |||||  | |||| ||||||| | ||||||| | | | |||| ||||||||||||| ||| ||||| |||     
T  20435879 agaaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccgggccttgcataaaatatgcaatatcccttaccaagtgagctaagctcac 20435780  T
Q  289 ggggac 294  Q
    ||||||    
T  20435779 ggggac 20435774  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 273
Target Start/End: Complemental strand, 42541274 - 42541170
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| ||| ||||| ||||||||| ||||||  ||| |||||| | ||| ||||||| |||||||||||| |||| | | | | ||||||||||    
T  42541274 gtcaagtagcctagcggctagagaaattcaccttaaaggtgagtaagtggggtgtctggggttcgaaccccagcccctgcata-aatatccattatccct 42541176  T
Q  268 taccaa 273  Q
    ||||||    
T  42541175 taccaa 42541170  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 294
Target Start/End: Complemental strand, 43684376 - 43684272
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcat 288  Q
    ||||||||| ||||||  |||||||||| | |||  |||||| ||||| |||||| |||| | |   |||||||||||||||||||||| ||||| ||||    
T  43684376 agaaattcaccttaaaggtgaataagtggggtgttcggggttcgaacctcagcccctgcatacaaa-tgcattatcccttaccaaatgagctaagctcat 43684278  T
Q  289 ggggac 294  Q
    ||||||    
T  43684277 ggggac 43684272  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 30856510 - 30856594
Alignment:
Q  185 ctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctta 269  Q
    ||||||||||| ||||||||  |||||||||||   || ||||||| ||||| || |||||||  ||||| ||||||||||||||    
T  30856510 ctaaagaaattgatcttaaatgtgaataagtgaagcgtctggggttcgaacctcaccccttgcttatattatgcattatccctta 30856594  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 24592845 - 24592906
Alignment:
Q  225 ggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttca 287  Q
    |||||||||||||||| ||||||| ||||| |||||| |||| |||||| ||| |||||||||    
T  24592845 ggggtttgaaccccagaccttgcatatattatgcattgtccc-taccaactgagctaagttca 24592906  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 283
Target Start/End: Complemental strand, 31848389 - 31848275
Alignment:
Q  169 tcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccctt 268  Q
    ||||||||| |||||| |||||||||||| ||| ||  ||||||| |||| |||  |||||||||||||| |  | |||| ||||| ||| | ||||||     
T  31848389 tcaagtagcctagtggttaaagaaattcacctttaaggtgaataattgaggtgttcggggtttgaacccccgatcatgcatatattatgcgtcatccctc 31848290  T
Q  269 accaaatgaactaag 283  Q
    ||||| ||| |||||    
T  31848289 accaagtgagctaag 31848275  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 41541579 - 41541617
Alignment:
Q  256 tgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  41541579 tgcattatcccttaccaaatgagctaagctcatggggac 41541617  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 33613581 - 33613682
Alignment:
Q  168 gtcaagtagcttagtggctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatccct 267  Q
    |||||||||| |||| |||| ||||||||| ||||||  |||||||||| | |||  |||||| |||| ||  |||| ||| ||| | ||||||||||||    
T  33613581 gtcaagtagcatagtagctagagaaattcaacttaaaggtgaataagtggggtgtccggggttcgaactccgaccctcgcatataatatgcattatccct 33613680  T
Q  268 ta 269  Q
    ||    
T  33613681 ta 33613682  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 18007333 - 18007297
Alignment:
Q  203 aaaatgaataagtgagatgtatggggtttgaacccca 239  Q
    |||||||||||||| | ||||||||||||||||||||    
T  18007333 aaaatgaataagtggggtgtatggggtttgaacccca 18007297  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 28819721 - 28819625
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagtt 285  Q
    ||||||||||| ||||| |||||||||||| ||| || |||||||||  | |||  |||| ||||| |||||||||  | | ||||||| |||||||    
T  28819721 agaaattcatcgtaaaagtgaataagtgaggtgtttgaggtttgaacttcggcctctgcatatattatgcattatctttgatcaaatgagctaagtt 28819625  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 34903579 - 34903508
Alignment:
Q  225 ggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggacaat 297  Q
    |||||| ||||| ||| ||||||| ||||| |||| | ||| ||||||| ||||||||| |||||||||||||    
T  34903579 ggggttcgaacctcagaccttgcatatattatgcactgtcc-ttaccaactgaactaagctcatggggacaat 34903508  T

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Target: scaffold0054 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 22561 - 22463
Alignment:
Q  185 ctaaagaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaag 283  Q
    ||||| ||||||| |||||||||||||||||| ||||| ||||||| ||||| |||||| | || ||| | || ||||||||||||||| ||| |||||    
T  22561 ctaaaaaaattcaccttaaaaatgaataagtgggatgtctggggttcgaacctcagcccctacatataatatgtattatcccttaccaagtgagctaag 22463  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 294
Target Start/End: Original strand, 121832 - 121901
Alignment:
Q  225 ggggtttgaaccccagcccttgcacatattgtgcattatcccttaccaaatgaactaagttcatggggac 294  Q
    |||||| ||||||| | || |||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  121832 ggggttcgaaccccggtccctgcacatattgtgcattatcccctaccaaatgagctaagctcatggggac 121901  T

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Target: scaffold0072 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 17730 - 17804
Alignment:
Q  189 agaaattcatcttaaaaatgaataagtgagatgtatggggtttgaaccccagcccttgcacatattgtgcattat 263  Q
    ||||||||| |||||||||||||||||||| ||| || |||| |||| |||  || |||| ||||| ||||||||    
T  17730 agaaattcaccttaaaaatgaataagtgaggtgtctgaggttcgaactccaatccctgcatatattatgcattat 17804  T

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