View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7020_low_22 (Length: 328)
Name: NF7020_low_22
Description: NF7020
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7020_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 13 - 296
Target Start/End: Original strand, 35751903 - 35752185
Alignment:
| Q |
13 |
aatatgcaaagaacctttcaaaaagttataaaaagaatggtggcgcaccttt-aactttcattttccaactcattctatgtcattggttagtgtgttgaa |
111 |
Q |
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| T |
35751903 |
aatatgcaaagaacctttcaaaaagttataaaaagaatggtggcgcaccttttaactttcattttccaactcattctatgttattggttagtgtgttgaa |
35752002 |
T |
|
| Q |
112 |
atgatgcatgaactatgaaaccattaacagaccaattatacgtgatttatgtattaagctcttcttaaattaagtttttaaacttgtttcttacttaaag |
211 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35752003 |
atgatgcatgaactctgaaaccattaacagaccaattatacgtgatttatgtattaagctcttcttaaattaagtttttaaacttgtttcttacttaaag |
35752102 |
T |
|
| Q |
212 |
ctctgtattctataggttgttgtataaattctttctcatcaaaacaaaaatatttaatagtgtatctgtttattattagtactta |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
35752103 |
ctctgtattctataggttgttgtataaattctttctcatcaaaacaaaaatattta--agtgtatctgtttattattagtactta |
35752185 |
T |
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