View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7022_low_12 (Length: 256)
Name: NF7022_low_12
Description: NF7022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7022_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 27062666 - 27062431
Alignment:
| Q |
1 |
tcttgtttggatgctgcatattcaccttcgtcgccacggcggttcgcggcgccggttaccttcctctacaactaaacgttcctcttaaccaccgcgttga |
100 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
27062666 |
tcttctttggatgctgcatattcaccttcgtcgccacggcggttcacggcgccggttaccttcctctacaacgaaacgttcctcttaaccaccgcgttga |
27062567 |
T |
|
| Q |
101 |
gatagacacgcttagagctcgtgacagagttcgccatgggagaattttgcgtgctagtgttggtggtgttgtcgacttcagagttcaaggctcttccgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27062566 |
gatagacacgcttagagctcgtgacagagttcgccatgggagaattttgcgtgctagtgttggtggtgttgtcgacttcagagttcaaggctcttccgat |
27062467 |
T |
|
| Q |
201 |
ccatccactcttgggtacgggtaataatcgtaatca |
236 |
Q |
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||||||||||||||||||||||||| |||||||||| |
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| T |
27062466 |
ccatccactcttgggtacgggtaattatcgtaatca |
27062431 |
T |
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