View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7024_high_5 (Length: 249)
Name: NF7024_high_5
Description: NF7024
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7024_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 39895228 - 39895013
Alignment:
| Q |
1 |
actaatttaaatggatggaaggtaatattattgagaatatatatgttgggaaagtgtgaaactaaaatagaagagtatgggccatgaccccacaagctca |
100 |
Q |
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| T |
39895228 |
actaatttaaatggatggaaggtaatattattgagaatatatatgttgggaaagtgtgaaactaaaatagaagagtatgggccatgaccccacaagctca |
39895129 |
T |
|
| Q |
101 |
agatgtatgagtcagaagaatgtgaatgtacgtttttgtgttgtgtagtgtagtgcaatttactttgtgggttatggatttatacagcacaataacatgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
39895128 |
agatgtatgagtcagaagaatgtgaatgtacgtttttgtgttgtgtagtgtagtgcaatttactctgtgggttatggatttatacagcacaataacatgc |
39895029 |
T |
|
| Q |
201 |
tcctagattttaatga |
216 |
Q |
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|||||||||||||||| |
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| T |
39895028 |
tcctagattttaatga |
39895013 |
T |
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