View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7025_high_15 (Length: 437)
Name: NF7025_high_15
Description: NF7025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7025_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 15 - 422
Target Start/End: Original strand, 329451 - 329858
Alignment:
| Q |
15 |
ctgtgactaaccaactgtgtaacttgctcagcaagtaactggttaacaactaaacaaataacttgcacagcaactaaaaagttgttcataacagtaacct |
114 |
Q |
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| T |
329451 |
ctgtgactaaccaactgtgtaacttgctcagcaagtaactggttaacaactaaacaaataacttgcacagcaactaaaaagttgttcataacagtaacct |
329550 |
T |
|
| Q |
115 |
ctatgaagtggttttaatatttagacaataatcactttgtgatgtgttaaaaaatgcaggtaaatatagtgcttcggtgtctagtggaggatttatttgg |
214 |
Q |
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| T |
329551 |
ctatgaagtagttttaatatttagacaataatcactttgtgatgtgttaaaaaatgcaggtaaatatagcgcttcggtgtctagtggaggatttatttgg |
329650 |
T |
|
| Q |
215 |
ctggttatactgttattgggtacgtgtggtgccgtaggatatgttttctacaagtacagaattcaggtatcattcattcattctcagtggtacattttaa |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
329651 |
ctggttatactgttattgggtacgtgtggtgccgtaggatatgttttctacaagtacagaattcaggtatcattcattcattctcagtggtacattttaa |
329750 |
T |
|
| Q |
315 |
gcattgaaatctagtcctacctaaaattgttgaaactaaaatacaataattgtgtgtactgcagagatatatggatgatgaaataagggcaataatggcc |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
329751 |
gcattgaaatctagtcctacctaaaattgttgaaactaaaatacaataattgtgtgtactgcagagatatatggatgatgaaataagggcaataatggcc |
329850 |
T |
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| Q |
415 |
caatacat |
422 |
Q |
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|||||||| |
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| T |
329851 |
caatacat |
329858 |
T |
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