View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7025_high_7 (Length: 573)
Name: NF7025_high_7
Description: NF7025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7025_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 525; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 525; E-Value: 0
Query Start/End: Original strand, 19 - 555
Target Start/End: Original strand, 34387583 - 34388119
Alignment:
| Q |
19 |
aatttgtggtgattcacaaggcaattcatgtcgacaaacgggacaagaattttgaattgcaagccatggaagtatgcattcattatggtatatgtgtttg |
118 |
Q |
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| T |
34387583 |
aatttgtggtgattcacaaggcaattcatgtcgacaaacgggacaagaattttgaattgcaagccatggaagtatgcattcattatggtatatgtgtttg |
34387682 |
T |
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| Q |
119 |
catggcatttcactagctgaaattccaagttcaaaaggctctttacaaacggcacaatgtgattctacattcatatgactctcgttgatttcaatcgtcg |
218 |
Q |
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| T |
34387683 |
catggcatttccctagctgaaattccaagttcaaaaggctctttacaaacggcacaatgtgattctacattcatatgactctcgttgatttcaatcgtcg |
34387782 |
T |
|
| Q |
219 |
gtaacaattccaccgcggattttaatgccggtaaatgttgttgattatgtccctcgtttccactacgattagcttcaacatgagaaagttgttccatcac |
318 |
Q |
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| T |
34387783 |
gtaacaattccaccgcggattttaatgccggtaaatgttgttgattatgtccctcgtttccactacgattagcttcaacatgagaaagttgttccatcac |
34387882 |
T |
|
| Q |
319 |
cctttcaaatccagaccctagaataaactctgacatccttggaggtaatgctctaagaccagaaccggcaccatcttcgtagaaaagctcaaactcgtta |
418 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34387883 |
cctttcaaatccagaccctagaataagctctgacatccttggaggtaatgctctaagaccagaaccggcaccatcttcgtagaaaagctcaaactcgtta |
34387982 |
T |
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| Q |
419 |
ttctcttcacgctcacggctcgtcccctcagaggaaccaccaccaccacgaatcatgataatcgggttaaacggagaaatgtctccaccgttaacattgt |
518 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34387983 |
ttctcttcacgctcacggctcgtcccctcagaggaaccaccaccaccacgaatcatgataatcgggttaaacggagaaatgtctccaccgttaacattgt |
34388082 |
T |
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| Q |
519 |
ttctacggcggcgtcgaaaagtattttgattataatt |
555 |
Q |
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|||||||| |||||||||||||||||||||||||||| |
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| T |
34388083 |
ttctacggtggcgtcgaaaagtattttgattataatt |
34388119 |
T |
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