View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7025_low_51 (Length: 212)
Name: NF7025_low_51
Description: NF7025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7025_low_51 |
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Alignment Details
Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 9093806 - 9093680
Alignment:
| Q |
15 |
atgaatcgttcttcttctcttcgattgaaaggcgaattcgatttgggttcagttaccagtctaccaccacttacaaattatattatttgc-nnnnnnnnc |
113 |
Q |
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| T |
9093806 |
atgaatcgttcttcttctcttcgattgaaaggggaattcgatttgggttcagctaccagtctaccaccacttacaaattatattatttgctttttttttc |
9093707 |
T |
|
| Q |
114 |
cctaaaaaatattatttgttttcgtaa |
140 |
Q |
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| T |
9093706 |
cgtaaaaaatattatttgttttcgtaa |
9093680 |
T |
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