View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7025_low_55 (Length: 203)

Name: NF7025_low_55
Description: NF7025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7025_low_55
NF7025_low_55
[»] chr1 (18 HSPs)
chr1 (19-187)||(34273057-34273225)
chr1 (24-167)||(26977715-26977858)
chr1 (39-182)||(16050384-16050528)
chr1 (63-154)||(33101493-33101584)
chr1 (63-139)||(5671784-5671860)
chr1 (37-169)||(12177374-12177506)
chr1 (36-134)||(5459715-5459812)
chr1 (21-150)||(22414747-22414876)
chr1 (72-167)||(16030418-16030513)
chr1 (37-150)||(52565568-52565681)
chr1 (92-167)||(12032226-12032300)
chr1 (63-172)||(1659757-1659866)
chr1 (37-121)||(14255049-14255133)
chr1 (96-163)||(2140925-2140992)
chr1 (37-164)||(18246131-18246257)
chr1 (70-167)||(23728793-23728890)
chr1 (121-185)||(8019020-8019084)
chr1 (63-150)||(23280252-23280337)
[»] chr6 (31 HSPs)
chr6 (37-187)||(18147294-18147445)
chr6 (69-167)||(19305484-19305582)
chr6 (41-169)||(15480312-15480440)
chr6 (56-147)||(3404855-3404946)
chr6 (21-187)||(30680964-30681131)
chr6 (37-167)||(33596849-33596979)
chr6 (63-169)||(19730562-19730668)
chr6 (63-167)||(20148331-20148433)
chr6 (63-167)||(22184395-22184497)
chr6 (49-140)||(689857-689948)
chr6 (56-167)||(34572967-34573078)
chr6 (64-169)||(9403187-9403292)
chr6 (75-187)||(17380123-17380236)
chr6 (60-150)||(4251034-4251124)
chr6 (59-133)||(25008398-25008471)
chr6 (19-148)||(9277293-9277421)
chr6 (19-148)||(9292012-9292140)
chr6 (70-150)||(22572066-22572145)
chr6 (22-148)||(34187272-34187397)
chr6 (76-169)||(11087529-11087622)
chr6 (36-133)||(14080471-14080567)
chr6 (63-167)||(14268445-14268550)
chr6 (74-167)||(16130993-16131086)
chr6 (37-125)||(19331695-19331783)
chr6 (67-166)||(10115659-10115758)
chr6 (89-167)||(31423810-31423888)
chr6 (82-167)||(19277049-19277134)
chr6 (70-127)||(31295548-31295605)
chr6 (74-167)||(34064220-34064313)
chr6 (95-147)||(12203631-12203683)
chr6 (70-127)||(12449596-12449653)
[»] chr8 (18 HSPs)
chr8 (63-172)||(30477655-30477764)
chr8 (69-187)||(26916850-26916969)
chr8 (21-167)||(13754730-13754876)
chr8 (59-167)||(18322953-18323061)
chr8 (68-146)||(6928084-6928162)
chr8 (63-167)||(21416752-21416856)
chr8 (36-163)||(17927681-17927808)
chr8 (64-147)||(24507472-24507555)
chr8 (38-167)||(3459457-3459586)
chr8 (21-127)||(13764961-13765067)
chr8 (63-187)||(5859829-5859954)
chr8 (75-167)||(17698258-17698350)
chr8 (62-133)||(24070865-24070936)
chr8 (28-167)||(24576556-24576695)
chr8 (63-114)||(23269260-23269311)
chr8 (109-167)||(23497136-23497194)
chr8 (82-114)||(7220554-7220586)
chr8 (37-165)||(15058023-15058151)
[»] chr3 (18 HSPs)
chr3 (22-167)||(9801057-9801201)
chr3 (63-165)||(17143724-17143826)
chr3 (36-168)||(21342259-21342391)
chr3 (66-167)||(16704419-16704520)
chr3 (66-167)||(30606945-30607046)
chr3 (63-162)||(2311812-2311911)
chr3 (77-163)||(28715465-28715551)
chr3 (66-167)||(28723747-28723848)
chr3 (64-169)||(1770840-1770946)
chr3 (37-172)||(12516173-12516308)
chr3 (56-150)||(17485614-17485708)
chr3 (63-162)||(8122893-8122991)
chr3 (66-141)||(13085072-13085147)
chr3 (21-165)||(20622378-20622524)
chr3 (64-172)||(12731529-12731637)
chr3 (70-149)||(431307-431386)
chr3 (73-167)||(14860072-14860166)
chr3 (36-80)||(9007836-9007880)
[»] scaffold0360 (1 HSPs)
scaffold0360 (64-187)||(13937-14061)
[»] chr2 (19 HSPs)
chr2 (22-187)||(12168945-12169112)
chr2 (21-166)||(36267470-36267615)
chr2 (64-167)||(3586378-3586481)
chr2 (23-165)||(12127638-12127780)
chr2 (63-172)||(24499803-24499912)
chr2 (59-168)||(45258124-45258233)
chr2 (21-147)||(27846512-27846638)
chr2 (37-167)||(19919039-19919169)
chr2 (70-167)||(15825175-15825272)
chr2 (37-165)||(45714983-45715111)
chr2 (37-140)||(20120335-20120438)
chr2 (70-127)||(18770335-18770392)
chr2 (70-167)||(18135892-18135989)
chr2 (97-166)||(18772296-18772365)
chr2 (70-185)||(23257803-23257917)
chr2 (63-165)||(10923140-10923242)
chr2 (70-167)||(19050408-19050505)
chr2 (64-137)||(24755483-24755556)
chr2 (63-167)||(29711032-29711134)
[»] chr4 (14 HSPs)
chr4 (63-167)||(47253291-47253395)
chr4 (21-167)||(12683757-12683903)
chr4 (41-172)||(19643694-19643825)
chr4 (63-167)||(19809715-19809819)
chr4 (63-167)||(29157116-29157220)
chr4 (63-167)||(15514534-15514638)
chr4 (70-167)||(15742126-15742223)
chr4 (63-167)||(5518554-5518658)
chr4 (36-107)||(16012504-16012575)
chr4 (21-115)||(10981838-10981932)
chr4 (98-165)||(2674549-2674616)
chr4 (70-116)||(14003088-14003134)
chr4 (97-139)||(19818741-19818783)
chr4 (66-126)||(14602029-14602089)
[»] chr5 (13 HSPs)
chr5 (63-165)||(22903107-22903209)
chr5 (16-185)||(20025250-20025419)
chr5 (63-167)||(26994579-26994683)
chr5 (37-167)||(25537393-25537523)
chr5 (59-176)||(24647298-24647415)
chr5 (38-150)||(25333724-25333836)
chr5 (63-147)||(27083231-27083314)
chr5 (37-166)||(8938900-8939028)
chr5 (23-172)||(22865735-22865884)
chr5 (61-150)||(32418476-32418565)
chr5 (56-119)||(19993186-19993249)
chr5 (103-146)||(34493567-34493610)
chr5 (37-105)||(26163623-26163691)
[»] scaffold0023 (1 HSPs)
scaffold0023 (40-167)||(95783-95910)
[»] chr7 (14 HSPs)
chr7 (49-187)||(5863187-5863326)
chr7 (38-167)||(26762884-26763013)
chr7 (63-166)||(9135335-9135438)
chr7 (21-140)||(9867939-9868058)
chr7 (92-167)||(29373489-29373564)
chr7 (37-166)||(39879375-39879505)
chr7 (63-134)||(21161255-21161326)
chr7 (63-137)||(7486559-7486633)
chr7 (39-167)||(13292096-13292224)
chr7 (63-150)||(12644799-12644887)
chr7 (95-167)||(16203768-16203840)
chr7 (69-140)||(10287596-10287667)
chr7 (98-167)||(16204340-16204409)
chr7 (111-167)||(43172009-43172065)
[»] scaffold0291 (2 HSPs)
scaffold0291 (63-169)||(15401-15507)
scaffold0291 (70-146)||(8571-8647)
[»] scaffold0054 (1 HSPs)
scaffold0054 (63-167)||(68775-68877)
[»] scaffold0140 (1 HSPs)
scaffold0140 (72-167)||(6321-6416)
[»] scaffold0505 (1 HSPs)
scaffold0505 (63-166)||(7899-8002)
[»] scaffold0205 (2 HSPs)
scaffold0205 (23-169)||(22860-23006)
scaffold0205 (63-127)||(10928-10992)
[»] scaffold0002 (2 HSPs)
scaffold0002 (76-167)||(120984-121075)
scaffold0002 (76-167)||(379743-379834)
[»] scaffold0294 (1 HSPs)
scaffold0294 (63-127)||(256-320)
[»] scaffold0074 (1 HSPs)
scaffold0074 (73-119)||(35277-35323)
[»] scaffold0263 (1 HSPs)
scaffold0263 (70-127)||(20510-20567)
[»] scaffold0103 (1 HSPs)
scaffold0103 (63-172)||(40810-40919)
[»] scaffold0479 (1 HSPs)
scaffold0479 (89-172)||(5078-5161)
[»] scaffold0057 (1 HSPs)
scaffold0057 (96-150)||(73792-73846)
[»] scaffold0013 (1 HSPs)
scaffold0013 (37-167)||(4397-4527)
[»] scaffold0005 (1 HSPs)
scaffold0005 (66-126)||(215289-215349)


Alignment Details
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 34273057 - 34273225
Alignment:
Q  19 aggagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgt 118  Q
    |||||||||||| ||| ||||||||||||||||||| || ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  34273057 aggagtctttgcggtgggacgaaaggtacctgcaagcacgttagcactccaatgctcaagtcagtaacggaactgagaaagagtgtgtagaaagtgttgt 34273156  T
Q  119 gtaaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtgtgcttgggaataaccgcc 187  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34273157 gtaaagtgactcataccttgagggtgaagcaatgtcgcccttatataggtgtgcttgggaataaccgcc 34273225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 26977715 - 26977858
Alignment:
Q  24 tctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaa 123  Q
    ||||||| |||  ||||||||| |||||| | || ||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||| |||    
T  26977715 tctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtaatggaaccgagaaagagtgtgtagaaagtattgtgaaaa 26977814  T
Q  124 gtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
     ||| |||||||||||| |||||||||| |  ||||||||||||    
T  26977815 atgaatcataccttgagggtgaagcaatttgacccttatatagg 26977858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 16050384 - 16050528
Alignment:
Q  39 gaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttg 138  Q
    |||||||| ||||| | || ||| ||||||||||||||||||  | | ||||||||||||||||||||||||||||| ||| |||||||  |||||||||    
T  16050384 gaaaggtatctgcaggcacgttagcactccaacgctcaagtcattgatggaactgagaaagagtgtgtagaaagtgtggtgaaaagtgaaccataccttg 16050483  T
Q  139 agagtgaagcaatgtcgcccttatataggtgtgc-ttgggaataa 182  Q
    ||  |||||||||| | |||||||||||||| || ||||||||||    
T  16050484 aggatgaagcaatgccacccttatataggtgcgcattgggaataa 16050528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 33101584 - 33101493
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtc 154  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||  | || |||||| ||||| |||||||    
T  33101584 cactccaacgctcaagtcggtaatggaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaaccgtaacttgagggtgaaacaatgtc 33101493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 5671784 - 5671860
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttga 139  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  5671784 cactccaacgctcaagttagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatacattga 5671860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 12177374 - 12177506
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| ||| || | || ||| |||||| || |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  12177374 acgaaaggtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaattatacct 12177473  T
Q  137 tgagagtgaagcaatgtcgcccttatataggtg 169  Q
    ||||   |||||||  ||  |||||||||||||    
T  12177474 tgaggaggaagcaagttcaaccttatataggtg 12177506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 5459812 - 5459715
Alignment:
Q  36 gacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatac 134  Q
    |||||||||| | |||| |||| ||| |||||||||| ||||  | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  5459812 gacgaaaggtgcatgcaggtacgttagcactccaacgttcaaaacagtaacgga-ctgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcatac 5459715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 22414747 - 22414876
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    |||||||||| |||  ||||||||| || ||| | || ||| |||||  ||||||||||| |||| | |||||| ||| ||||||||||||||||||||     
T  22414747 gagtctttgcggtggaacgaaaggtgcccgcaggcacgttagcactctgacgctcaagtcagtaatgaaactgaaaaaaagtgtgtagaaagtgttgtga 22414846  T
Q  121 aaagtgactcataccttgagagtgaagcaa 150  Q
    ||||||| ||||| |||||| |||||||||    
T  22414847 aaagtgaatcatatcttgagggtgaagcaa 22414876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 16030418 - 16030513
Alignment:
Q  72 gctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||||| |||| ||||||||  ||||||||||||||||||||||| ||||||| |||||||||||| | ||||| | | | ||||||||||||    
T  16030418 gctcaagtcagtaatggaactgaataagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggcgaagctaagccacccttatatagg 16030513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 52565568 - 52565681
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| ||||||   || ||| |||||  ||||||||||| |||| |||||||| |||||||| | ||||||||||||| ||||||| ||||| ||    
T  52565568 acgaaaggtgcctgcagacacgttagcactctgacgctcaagtcagtaaaggaactgaaaaagagtgcgcagaaagtgttgtgaaaagtgaatcataact 52565667  T
Q  137 tgagagtgaagcaa 150  Q
    |||| |||||||||    
T  52565668 tgagggtgaagcaa 52565681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 12032300 - 12032226
Alignment:
Q  92 tgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |||||| ||||| | | ||| ||||||||||||    
T  12032300 tgagaaagagtgtgtagaaagtgttgtgtaaaatgaatcataacttgag-gtgaaactaagtcacccttatatagg 12032226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 1659866 - 1659757
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||||||||||||||||  ||| ||| |||||||||| ||||||  |||||||||| |||||||   ||| |||| | ||| |||||  || |||||||    
T  1659866 cactccaacgctcaagtcaataatggatctgagaaagaatgtgtaagaagtgttgtgaaaagtgagaaatatcttgtgggtggagcaagttcacccttat 1659767  T
Q  163 ataggtgtgc 172  Q
    ||||||||||    
T  1659766 ataggtgtgc 1659757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 14255133 - 14255049
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgta 121  Q
    ||||| ||| |||||||| ||  || ||||||||||||||||||  ||| | |||||||||||||||||||  ||||||||||||    
T  14255133 acgaagggtgcctgcaagcacgatagcactccaacgctcaagtcattaatgaaactgagaaagagtgtgtaagaagtgttgtgta 14255049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 2140992 - 2140925
Alignment:
Q  96 aaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttata 163  Q
    ||||| |||||||||||||||||| |||||||  ||||||||||| ||||||| | ||| ||||||||    
T  2140992 aaagaatgtgtagaaagtgttgtggaaagtgaaccataccttgagggtgaagctaagtcacccttata 2140925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 164
Target Start/End: Original strand, 18246131 - 18246257
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    |||||||||  ||| ||| || |||||||||||||||||||||  |||   ||| ||||||||||||| || |||||| || | ||||||| ||||||||    
T  18246131 acgaaaggtgtctgtaagcacgttaacactccaacgctcaagtgagtattagaattgagaaagagtgtataaaaagtg-tgagaaaagtgattcatacct 18246229  T
Q  137 tgagagtgaagcaatgtcgcccttatat 164  Q
    |||| ||||||  | ||| |||||||||    
T  18246230 tgagggtgaagataagtcacccttatat 18246257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 23728890 - 23728793
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||||||||  ||| |||| ||||||||||||||||  |||||||||| |||||||    ||||||||| ||||| |||  || ||||||||||||    
T  23728890 acgctcaagtcattaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaaacaagttcacccttatatagg 23728793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 8019020 - 8019084
Alignment:
Q  121 aaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtgtgcttgggaataaccg 185  Q
    ||||||| |||||||||| | ||||||| ||||| |||||||||||| |||  || |||||||||    
T  8019020 aaagtgaatcataccttgggggtgaagctatgtcacccttatataggcgtgtgtgagaataaccg 8019084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 23280337 - 23280252
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaa 150  Q
    ||||| ||| |||||||| |||| ||||||||||||| ||||||  | ||||||||| ||||||| | || || |||| |||||||||    
T  23280337 cactcaaactctcaagtcagtaatggaactgagaaagtgtgtgt--atagtgttgtgaaaagtgaataatgccatgagggtgaagcaa 23280252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 4e-40; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 18147294 - 18147445
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| |||| | | || ||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  18147294 acgaaaggtgcctgtaggaacgttaacactccaacgctcaagtcactaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgactcatacct 18147393  T
Q  137 tgagagtgaagcaatgtcgcccttatataggtgtgc-ttgggaataaccgcc 187  Q
    | || ||||||||||||| |||||||||||||| || |||||| ||||||||    
T  18147394 ttagggtgaagcaatgtcacccttatataggtgcgcattgggattaaccgcc 18147445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 19305484 - 19305582
Alignment:
Q  69 aacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| ||| |||||| |||||    
T  19305484 aacgctcaagtcagtaatggaactgagtaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaaggtcacccttaaatagg 19305582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 15480440 - 15480312
Alignment:
Q  41 aaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgag 140  Q
    ||||| |||||||| |  ||| ||||| ||| ||||||||  ||| | |||||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  15480440 aaggtgcctgcaagcaagttatcactcgaactctcaagtcaataatgaaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaatcataccttgag 15480341  T
Q  141 agtgaagcaatgtcgcccttatataggtg 169  Q
    |||||||| | ||| ||||||||||||||    
T  15480340 agtgaagctaagtcacccttatataggtg 15480312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 3404946 - 3404855
Alignment:
Q  56 acattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaag 147  Q
    |||||||||||| ||| || ||||| |||| ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||    
T  3404946 acattaacactctaacacttaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcataccttgagggtgaag 3404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 30680964 - 30681131
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    ||||||| || ||| ||||||||||  ||||||  || ||| |||||||||||||||||| |||| | |||||| |||||| |||||||| || |||||     
T  30680964 gagtcttcgcggtgggacgaaaggtgtctgcaatcacgttagcactccaacgctcaagtcagtaatgaaactgataaagagcgtgtagaatgtattgtga 30681063  T
Q  121 aaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtgtgc-ttgggaataaccgcc 187  Q
    ||||||| ||||||||||||  |||||||||||| || ||| ||||| | || ||| |||||||||||    
T  30681064 aaagtgaatcataccttgaggatgaagcaatgtcacctttagataggcgcgcgttgagaataaccgcc 30681131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 33596849 - 33596979
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    |||||||||||||||| | |||||||||||| ||||||||| || |||| | |||| ||||| |||||||||||||||||||| |||  || ||||||||    
T  33596849 acgaaaggtacctgcaggcacattaacactctaacgctcaactcagtaatgaaactaagaaaaagtgtgtagaaagtgttgtgaaaatggaatcatacct 33596948  T
Q  137 tgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||  ||||||||  || | ||||||||||    
T  33596949 tgaggatgaagcaagttcactcttatatagg 33596979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 19730668 - 19730562
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||  |||||| |||||||||||    ||||||||| |||||||||  || |||||||    
T  19730668 cactccaacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgtcgtgtaaagtgatgtgtaccttgagggtgaagcaagttcacccttat 19730569  T
Q  163 ataggtg 169  Q
    |||||||    
T  19730568 ataggtg 19730562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 20148331 - 20148433
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||||| |||||||||  |||| |||| |||||||||||||  ||||||||||||| ||||||| |||||||||||  ||||||||| ||| |||||||    
T  20148331 cactccatcgctcaagttagtaatggaattgagaaagagtgt--agaaagtgttgtgaaaagtgaatcataccttgatggtgaagcaaggtcacccttat 20148428  T
Q  163 atagg 167  Q
    |||||    
T  20148429 atagg 20148433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 22184497 - 22184395
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||||| |||||||||  |||| |||| |||||||||||||  ||||||||||||| ||||||| |||||||||||  ||||||||| ||| |||||||    
T  22184497 cactccatcgctcaagttagtaatggaattgagaaagagtgt--agaaagtgttgtgaaaagtgaatcataccttgatggtgaagcaaggtcacccttat 22184400  T
Q  163 atagg 167  Q
    |||||    
T  22184399 atagg 22184395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 689948 - 689857
Alignment:
Q  49 tgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgag 140  Q
    |||| |||||||| |||| ||| ||||||||| |||| ||||||||||||| ||||||| ||||||||||| ||||||| || |||||||||    
T  689948 tgcaggtacattagcactgcaatgctcaagtcagtaatggaactgagaaagtgtgtgtataaagtgttgtgaaaagtgaatcgtaccttgag 689857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 34573078 - 34572967
Alignment:
Q  56 acattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcg 155  Q
    ||||||| ||||||||||||||||  ||||  ||||| ||||| |||||||||||||||| ||| ||||||| |||||| ||||| ||||||  | |||     
T  34573078 acattaatactccaacgctcaagttagtaatagaactaagaaaaagtgtgtagaaagtgtggtgaaaagtgaatcatacattgagggtgaagttaagtca 34572979  T
Q  156 cccttatatagg 167  Q
    ||||||||||||    
T  34572978 cccttatatagg 34572967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 9403187 - 9403292
Alignment:
Q  64 actccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttata 163  Q
    ||||| |||||||||||  ||| |||||||||||||||||||||  |||||||||| |||||||    ||||||||| |||||||||  || ||||||||    
T  9403187 actccgacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagggtgaagcaagttcacccttata 9403286  T
Q  164 taggtg 169  Q
    ||||||    
T  9403287 taggtg 9403292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 17380123 - 17380236
Alignment:
Q  75 caagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtgtgc-t 173  Q
    |||||| ||||  |||||||||||||||||| | ||||||||||| ||||||| || |||||| ||  ||| |||| ||| |||||||||||| |||| |    
T  17380123 caagtcagtaatagaactgagaaagagtgtgaataaagtgttgtgaaaagtgaatcttaccttcaggttgacgcaaggtcacccttatataggcgtgcgt 17380222  T
Q  174 tgggaataaccgcc 187  Q
    ||||||||||||||    
T  17380223 tgggaataaccgcc 17380236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 4251124 - 4251034
Alignment:
Q  60 taacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaa 150  Q
    ||||||||||||| ||||||| |||| | || |||||||||||||| ||| ||||||||| ||||| | ||||| |||||| |||||||||    
T  4251124 taacactccaacgttcaagtcagtaatgaaaatgagaaagagtgtggagagagtgttgtgaaaagtaaatcatatcttgagggtgaagcaa 4251034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 25008471 - 25008398
Alignment:
Q  59 ttaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcata 133  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||| |||||| || ||||||||| |||||    
T  25008471 ttaacactccaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaagtg-tgggtaaagtgaatcata 25008398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 9277421 - 9277293
Alignment:
Q  19 aggagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgt 118  Q
    |||||||||||| |||  ||||||||| ||||||   || ||| ||||  |||||||||||| |||  |||||||||||||||| |||| ||||||| |     
T  9277421 aggagtctttgcggtggaacgaaaggttcctgcagacacgttagcactataacgctcaagtcagtattggaactgagaaagagtatgtaaaaagtgtgga 9277322  T
Q  119 gtaaagtgactcataccttgagagtgaagc 148  Q
    | ||||||| |||||||||||| |||||||    
T  9277321 g-aaagtgaatcataccttgagggtgaagc 9277293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 9292140 - 9292012
Alignment:
Q  19 aggagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgt 118  Q
    |||||||||| | |||  ||||||||| |||||||| || ||| ||| | |||||||||||| |||  |||||||||||| ||| |||| |||||| ||     
T  9292140 aggagtctttacggtggaacgaaaggtgcctgcaagcacgttagcacgctaacgctcaagtcagtattggaactgagaaatagtatgtaaaaagtg-tgg 9292042  T
Q  119 gtaaagtgactcataccttgagagtgaagc 148  Q
    | ||||||| |||||||||||| |||||||    
T  9292041 gaaaagtgaatcataccttgagggtgaagc 9292012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 22572066 - 22572145
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaa 150  Q
    ||||||| ||| |||| |||| ||| ||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||    
T  22572066 acgctcatgtcagtaatggaattga-aaagagtgtgtagaaggtgttgtgtaaagtgaatcatatcttgagggtgaagcaa 22572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 34187272 - 34187397
Alignment:
Q  22 agtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgta 121  Q
    ||||||||| |||  |||||||||  |||||   || ||| ||| ||||| |||||||| |||| ||||||||||||||||||||| ||||||| ||| |    
T  34187272 agtctttgcggtggaacgaaaggtgtctgcagacacgttagcacaccaacactcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgtggtg-a 34187370  T
Q  122 aagtgactcataccttgagagtgaagc 148  Q
    |||||| |  ||||||||| |||||||    
T  34187371 aagtgaattgtaccttgagggtgaagc 34187397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 11087529 - 11087622
Alignment:
Q  76 aagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtg 169  Q
    ||||| |||| | |||||||||||||| ||||||  |||||||| ||||||| ||||||||||||  |||| |||  || ||||||||||||||    
T  11087529 aagtcagtaatgtaactgagaaagagtatgtagattgtgttgtgaaaagtgaatcataccttgaggatgaaacaagttcacccttatataggtg 11087622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 14080471 - 14080567
Alignment:
Q  36 gacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcata 133  Q
    |||||||||| ||| || | |||||| |||||  ||||||||||  |||| | |||||||||||||||||||| |||||||||| ||||||| |||||    
T  14080471 gacgaaaggtgcctacaggcacattagcactctgacgctcaagttagtaatg-aactgagaaagagtgtgtagtaagtgttgtgaaaagtgaatcata 14080567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 14268445 - 14268550
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttga-gagtgaagcaatgtcgccctta 161  Q
    |||||||||||| ||||| |||| |||||| ||| | ||||||||||||||||| || ||||||| ||||| | ||| | ||||||| | ||| ||||||    
T  14268445 cactccaacgctgaagtcagtaatggaactaagacatagtgtgtagaaagtgttttgaaaagtgaatcatatcgtgaggggtgaagctaagtcaccctta 14268544  T
Q  162 tatagg 167  Q
    ||||||    
T  14268545 tatagg 14268550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 16130993 - 16131086
Alignment:
Q  74 tcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||| |||| |||||||| |||||||||  ||||||||||||| || |||| |||||||||||| ||||| |||  |  ||||||||||||    
T  16130993 tcaagtcagtaatggaactgataaagagtgtacagaaagtgttgtgaaacgtgaatcataccttgagggtgaaacaagtttacccttatatagg 16131086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 19331783 - 19331695
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagt 125  Q
    ||||||||| | |||| |||| |||  ||||| ||||| ||||| |||| |||||| |||||||| || ||||||||||||||||||||    
T  19331783 acgaaaggtgcttgcaggtacgttagtactccgacgcttaagtcagtaatggaactaagaaagagagtatagaaagtgttgtgtaaagt 19331695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 10115758 - 10115659
Alignment:
Q  67 ccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatag 166  Q
    |||| ||||||||| |||| | ||||||||||||| | ||| ||||| ||||| ||||||| |||||||| ||| ||||||| | |||  ||||||||||    
T  10115758 ccaatgctcaagtcagtaatgaaactgagaaagagcgagtaaaaagttttgtgaaaagtgaatcatacctcgagggtgaagctaagtcagccttatatag 10115659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 31423888 - 31423810
Alignment:
Q  89 aactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||||||||||| ||||||||||||||||  |||||| ||||  |||||| |||||||||   | ||||||||||||    
T  31423888 aactgagaaagagtatgtagaaagtgttgtgagaagtgaatcatgtcttgagggtgaagcaagtgcacccttatatagg 31423810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 19277134 - 19277049
Alignment:
Q  82 gtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||| |||| ||||||||||||||||  |||||||||| |||||||    ||||||||| |||||||||  || ||||||||||||    
T  19277134 gtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 19277049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 31295605 - 31295548
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtga 127  Q
    ||||||||||| |||| | |||||||||||||||||||  |||||||||| |||||||    
T  31295605 acgctcaagtcagtaatgaaactgagaaagagtgtgtatgaagtgttgtgaaaagtga 31295548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 34064220 - 34064313
Alignment:
Q  74 tcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||| |||| | |||| ||||||||||||||  |||||||||| |||||||    ||||||||| |||||||||  || ||||||||||||    
T  34064220 tcaagtcagtaatgaaactaagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 34064313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 12203683 - 12203631
Alignment:
Q  95 gaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaag 147  Q
    |||||||| |||||||||||||||| ||||||| |||||| ||||| ||||||    
T  12203683 gaaagagtatgtagaaagtgttgtgaaaagtgaatcatactttgagggtgaag 12203631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 12449653 - 12449596
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtga 127  Q
    ||||||||||| |||| ||| |||| ||||||||||||  |||||||||| |||||||    
T  12449653 acgctcaagtcagtaatggagctgaaaaagagtgtgtaagaagtgttgtggaaagtga 12449596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 30477655 - 30477764
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||| |||||||    
T  30477655 cactccaacgctcaagtcagtaacgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagtaatgtcacccttat 30477754  T
Q  163 ataggtgtgc 172  Q
    ||||| ||||    
T  30477755 ataggcgtgc 30477764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 26916969 - 26916850
Alignment:
Q  69 aacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatataggt 168  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||  |||||||||||||||||||||||||     
T  26916969 aacgctcaagtcagtaatggaactgagagagagtgtgtagaaagtgttgtgaaaagtgagtcataccttgagcatgaagcaatgtcgcccttatataggc 26916870  T
Q  169 gtgc-ttgggaataaccgcc 187  Q
    | || ||| |||||||||||    
T  26916869 gcgcgttgagaataaccgcc 26916850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 13754730 - 13754876
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    ||||||| ||| || |||||||||| |||||  | || |||||||| || |||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  13754730 gagtcttcgcaatgggacgaaaggtgcctgctggcacgttaacactacatcgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgt 13754829  T
Q  121 aaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||| || ||||||||| ||||||| | ||| | ||||||||||    
T  13754830 aaagtgaatcctaccttgagggtgaagctaagtcactcttatatagg 13754876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 18322953 - 18323061
Alignment:
Q  59 ttaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgccc 158  Q
    |||||||||||||||||||||| ||||  ||||||||||||| |||||||||| ||||||| ||||||| |||||| |||||  |||||||| ||| |||    
T  18322953 ttaacactccaacgctcaagtcagtaatagaactgagaaagattgtgtagaaaatgttgtgaaaagtgaatcatacattgaggatgaagcaaggtcaccc 18323052  T
Q  159 ttatatagg 167  Q
    |||||||||    
T  18323053 ttatatagg 18323061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 6928162 - 6928084
Alignment:
Q  68 caacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaa 146  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||    
T  6928162 caacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaa 6928084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 21416752 - 21416856
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| ||| || |||||| || |||||||||  || ||||| |    
T  21416752 cactccgacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcgtaccttaagggtgaagcaagttcacccttgt 21416851  T
Q  163 atagg 167  Q
    |||||    
T  21416852 atagg 21416856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 163
Target Start/End: Complemental strand, 17927808 - 17927681
Alignment:
Q  36 gacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacc 135  Q
    |||||||||| | |||| | || ||| |||||||||||| ||||| |||| ||||||||||  |||| ||||||||||||| || || |||| |||||||    
T  17927808 gacgaaaggtgcatgcatgcacgttagcactccaacgcttaagtcagtaatggaactgagattgagtatgtagaaagtgttatgaaaggtgaatcatacc 17927709  T
Q  136 ttgagagtgaagcaatgtcgcccttata 163  Q
    || || ||||||||||| | ||||||||    
T  17927708 ttaagggtgaagcaatgccacccttata 17927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 147
Target Start/End: Original strand, 24507472 - 24507555
Alignment:
Q  64 actccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaag 147  Q
    ||||||||| |||||||  ||| |||| ||||||||||||| |||||||||||||| ||||||| |||||||||||| ||||||    
T  24507472 actccaacgatcaagtcaataatggaaatgagaaagagtgtctagaaagtgttgtgaaaagtgaatcataccttgagggtgaag 24507555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 3459586 - 3459457
Alignment:
Q  38 cgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgtt-gtgtaaagtgactcatacct 136  Q
    |||||||| |||||| | || ||| ||||||  |||||||||| |||| ||||||||| |||||||||||||||||||| ||| ||||| | || |||||    
T  3459586 cgaaaggtgcctgcaggcacgttagcactccggcgctcaagtcagtaatggaactgagcaagagtgtgtagaaagtgttggtgaaaagtaaatcgtacct 3459487  T
Q  137 tgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||| |||||||||  || ||||||||||||    
T  3459486 tgag-gtgaagcaagttcacccttatatagg 3459457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 13764961 - 13765067
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    ||||||| || ||| ||||||||||  ||||| | || |||| ||||||| | ||||||  |||| | ||||||||||||||||||||||||||||||||    
T  13764961 gagtcttcgcggtgtgacgaaaggtgtctgcaggcacgttaagactccaatgttcaagtgagtaatgaaactgagaaagagtgtgtagaaagtgttgtgt 13765060  T
Q  121 aaagtga 127  Q
    |||||||    
T  13765061 aaagtga 13765067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 5859829 - 5859954
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||||||||||||||||  ||| |||||| ||||| ||||||| || |||||| ||  |||||| || |||||||||| |||||||| ||| |||||||    
T  5859829 cactccaacgctcaagtcaataatggaactaagaaatagtgtgttgagagtgttttgagaagtgaatcgtaccttgagattgaagcaaggtcacccttat 5859928  T
Q  163 ataggtgtgc-ttgggaataaccgcc 187  Q
    ||||| | || |||| ||||||||||    
T  5859929 ataggcgcgcgttggaaataaccgcc 5859954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 17698350 - 17698258
Alignment:
Q  75 caagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||| | |||| ||||| ||||||||| | | ||| ||||||||    
T  17698350 caagtcagtaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgaattatactttgagggtgaagcaaggccacccatatatagg 17698258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 24070865 - 24070936
Alignment:
Q  62 acactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcata 133  Q
    |||||||||| || ||||| |||| |||||| ||||||||||||||||||||||||||  |||||| |||||    
T  24070865 acactccaacacttaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgagaagtgaatcata 24070936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 167
Target Start/End: Complemental strand, 24576695 - 24576556
Alignment:
Q  28 tgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtga 127  Q
    |||||||  ||||||||| |||||| | || |||||||||  ||||||||||| |||| |||||| | || |||||||||  |||||||||| ||||| |    
T  24576695 tgcagtggaacgaaaggtgcctgcaggcacgttaacactctgacgctcaagtcagtaatggaactaaaaatgagtgtgtaagaagtgttgtgaaaagtaa 24576596  T
Q  128 ctcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
        ||||||||| |||||| ||  || ||||||||||||    
T  24576595 tgtgtaccttgagggtgaaggaagttcacccttatatagg 24576556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 23269260 - 23269311
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtg 114  Q
    ||||||||| || ||||| |||| |||||||| |||||||||||||||||||    
T  23269260 cactccaacacttaagtcagtaatggaactgataaagagtgtgtagaaagtg 23269311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 23497194 - 23497136
Alignment:
Q  109 aaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||||||| | ||||| |||||||||||| || |||||| ||| ||||||||||||    
T  23497194 aaagtgttgtgaatagtgaatcataccttgagggttaagcaaagtcacccttatatagg 23497136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 7220554 - 7220586
Alignment:
Q  82 gtaacggaactgagaaagagtgtgtagaaagtg 114  Q
    |||| ||||||||||||||||||||||||||||    
T  7220554 gtaatggaactgagaaagagtgtgtagaaagtg 7220586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 15058023 - 15058151
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| | |||| | || ||| |||| |||||| |||||  |||| | || ||||||| | |||||||||||||| ||| ||| | | ||||||||    
T  15058023 acgaaaggtgcatgcaggcacgttagcactacaacgcacaagttagtaatgaaattgagaaaaaatgtgtagaaagtgtggtgaaaaataaatcatacct 15058122  T
Q  137 tgagagtgaagcaatgtcgcccttatata 165  Q
    |||| ||||| ||| ||| | ||||||||    
T  15058123 tgagggtgaaacaacgtcacacttatata 15058151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 4e-34; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 9801201 - 9801057
Alignment:
Q  22 agtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgta 121  Q
    |||||| ||||||  ||||||||| |||||||| || ||| ||||| ||| |||||||| ||||  |||| ||||||||||||||||||||||||||| |    
T  9801201 agtcttcgcagtggaacgaaaggtgcctgcaagcacgttagcactc-aacactcaagtcagtaatagaacagagaaagagtgtgtagaaagtgttgtgaa 9801103  T
Q  122 aagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  9801102 aagtgaatcataccttgagggtgaagcaatgtcacccttatatagg 9801057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 63 - 165
Target Start/End: Complemental strand, 17143826 - 17143724
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||| |||  || |||||||    
T  17143826 cactccgacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgggggtgaaacaacatcacccttat 17143727  T
Q  163 ata 165  Q
    |||    
T  17143726 ata 17143724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 36 - 168
Target Start/End: Complemental strand, 21342391 - 21342259
Alignment:
Q  36 gacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacc 135  Q
    |||||||||||  |||| | || |||||| | ||||||||||||| |||| |||||||| ||||||||| |||||||||||||| ||||||| ||||||     
T  21342391 gacgaaaggtatatgcaggcacgttaacagtacaacgctcaagtcagtaatggaactgataaagagtgtatagaaagtgttgtgaaaagtgaatcataca 21342292  T
Q  136 ttgagagtgaagcaatgtcgcccttatataggt 168  Q
    ||||| |||||| || ||  |||||||||||||    
T  21342291 ttgagggtgaagtaaggttacccttatataggt 21342259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 16704419 - 16704520
Alignment:
Q  66 tccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatata 165  Q
    ||||||||| ||||| |||| |||  |||||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||  || ||||||||||    
T  16704419 tccaacgctgaagtcagtaatggagttgagaaagagagtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatata 16704518  T
Q  166 gg 167  Q
    ||    
T  16704519 gg 16704520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 30606945 - 30607046
Alignment:
Q  66 tccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatata 165  Q
    ||||||||||||||| |||| |||| |||||||||||| ||||||||||||||| ||||||| | |||||||||| |||||| || | | ||||||||||    
T  30606945 tccaacgctcaagtcagtaatggaattgagaaagagtgagtagaaagtgttgtgaaaagtgaattataccttgagggtgaagtaaggccacccttatata 30607044  T
Q  166 gg 167  Q
    ||    
T  30607045 gg 30607046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 2311911 - 2311812
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||||||||||||| || | || |||  ||||||||| |||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||    
T  2311911 cactccaacgctcaaatcagcaagggatttgagaaagaatgtgtagaaagtgttgtgaaaggtgaatcataccttgagggtgaagcaatgtcacccttat 2311812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 28715551 - 28715465
Alignment:
Q  77 agtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttata 163  Q
    |||| |||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||| ||||| |||| || ||||||||    
T  28715551 agtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgaatcataccttgagggtgaaacaatatcacccttata 28715465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 28723848 - 28723747
Alignment:
Q  66 tccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatata 165  Q
    |||||||||||||||  ||| |||||| |||||||||||||||||| ||||||| ||||||| || || || ||| ||||| |||||||  |||||||||    
T  28723848 tccaacgctcaagtcactaatggaactaagaaagagtgtgtagaaaatgttgtgaaaagtgaatcgtatctggagggtgaaacaatgtcatccttatata 28723749  T
Q  166 gg 167  Q
    ||    
T  28723748 gg 28723747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 1770840 - 1770946
Alignment:
Q  64 actccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcat--accttgagagtgaagcaatgtcgccctta 161  Q
    ||||| ||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||| ||||   |||||||  ||||||||  |||||||||    
T  1770840 actccgacgctcaagttagtaatggaactgaggaagagtgtgtagaaagtgttgtgaaaagtga-tcatgcgccttgaggatgaagcaagttcgccctta 1770938  T
Q  162 tataggtg 169  Q
    ||||||||    
T  1770939 tataggtg 1770946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 12516173 - 12516308
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| ||||||   || ||| |||||| ||||||||||  |||| |||||||||||||| ||||||  |||||||||| |||||||    |||||    
T  12516173 acgaaaggtgcctgcagacacgttagcactccgacgctcaagttagtaatggaactgagaaagattgtgtaataagtgttgtgaaaagtgatatgtacct 12516272  T
Q  137 tgagagtgaagcaatgtcgcccttatataggtgtgc 172  Q
    |||| |||||||||  || || ||||||||||||||    
T  12516273 tgagggtgaagcaagttcacctttatataggtgtgc 12516308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 17485708 - 17485614
Alignment:
Q  56 acattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaa 150  Q
    |||||| ||| |||||||||||||| |||| |||| |||||| ||||||||||| | ||||||||||| ||| |  ||||||||| |||||||||    
T  17485708 acattagcaccccaacgctcaagtcagtaatggaattgagaaggagtgtgtagagaatgttgtgtaaaatgaatagtaccttgagggtgaagcaa 17485614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 8122991 - 8122893
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||| |||| | || ||| ||| | | ||| ||||| |||||| ||||||| |||||||||||| ||||||||||||| |||||||    
T  8122991 cactccaacgctcaagtcagtaatgaaattgaaaaa-actatgtcgaaagcgttgtgaaaagtgaatcataccttgagggtgaagcaatgtcacccttat 8122893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 13085147 - 13085072
Alignment:
Q  66 tccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgaga 141  Q
    |||||||||||||||  ||| | |||||||||||| | |||||||||| ||||| ||||||| ||| |||||||||    
T  13085147 tccaacgctcaagtcaataatgaaactgagaaagaatatgtagaaagtattgtgaaaagtgaatcaaaccttgaga 13085072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 20622378 - 20622524
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtaga--aagtgttgt 118  Q
    ||||||| ||||||  ||||||||| |||||| | |  ||||||||   ||||||||||| |||| |  |  |||||| ||||||||||  ||||| |||    
T  20622378 gagtcttcgcagtgaaacgaaaggttcctgcaggcatgttaacactttgacgctcaagtcagtaatgagatagagaaatagtgtgtagataaagtggtgt 20622477  T
Q  119 gtaaagtgactcataccttgagagtgaagcaatgtcgcccttatata 165  Q
    | ||||||| |||||||||||| |||||||||  || ||||||||||    
T  20622478 gaaaagtgaatcataccttgagggtgaagcaagttcacccttatata 20622524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 12731637 - 12731529
Alignment:
Q  64 actccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttata 163  Q
    ||||| ||||||| |||  ||| |||||||||||||||||| ||  |||||||||| |||||||     |||||||| |||||||||  || ||||||||    
T  12731637 actccgacgctcacgtcattaatggaactgagaaagagtgtataagaagtgttgtgaaaagtgatgtgaaccttgagggtgaagcaagttcacccttata 12731538  T
Q  164 taggtgtgc 172  Q
    || ||||||    
T  12731537 tatgtgtgc 12731529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 431386 - 431307
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagca 149  Q
    |||||||||||  ||| ||||||||||||||||| || ||||||| |||| ||||||| |  | ||||||| ||||||||    
T  431386 acgctcaagtcaataatggaactgagaaagagtgcgtggaaagtgctgtgaaaagtgaattgtcccttgagggtgaagca 431307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 14860166 - 14860072
Alignment:
Q  73 ctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||| || |||| |||||||||||| ||| ||||  |||||||||| |||||||    ||||||||| |||||||||  || ||||||||||||    
T  14860166 ctcaactcagtaatggaactgagaaacagtttgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 14860072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 9007880 - 9007836
Alignment:
Q  36 gacgaaaggtacctgcaagtacattaacactccaacgctcaagtc 80  Q
    |||||||||| |||||| | || ||||||||||||||||||||||    
T  9007880 gacgaaaggtgcctgcaggcacgttaacactccaacgctcaagtc 9007836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 73; Significance: 1e-33; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 13937 - 14061
Alignment:
Q  64 actccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttata 163  Q
    ||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||||  || ||||||||    
T  13937 actccaaagctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgagaagtgaatcataccttgagggtgaagcaagatcacccttata 14036  T
Q  164 taggtgtgc-ttgggaataaccgcc 187  Q
    ||||||||| |||||||||||||||    
T  14037 taggtgtgcattgggaataaccgcc 14061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 6e-33; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 12168945 - 12169112
Alignment:
Q  22 agtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgct-caagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    ||||||||| |||  |||||||||  ||||| | ||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||||||||||||     
T  12168945 agtctttgcggtggaacgaaaggtgtctgcaggcacattaacactccaacgcttcaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtga 12169044  T
Q  121 aaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtgtgc-ttgggaataaccgcc 187  Q
    ||||||| | |||||||||| ||||||||||| | |||||| ||||| | || ||| |||||||||||    
T  12169045 aaagtgaattataccttgagggtgaagcaatgccacccttaaataggcgcgcgttgagaataaccgcc 12169112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 36267470 - 36267615
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    ||||||| ||||||  | ||||||| |||||| | |  |||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||||||     
T  36267470 gagtcttcgcagtggaatgaaaggtgcctgcatgcatgttaacactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagggttgtga 36267569  T
Q  121 aaagtgactcataccttgagagtgaagcaatgtcgcccttatatag 166  Q
    ||||||| |||||||||||| |||||||||  || |||||||||||    
T  36267570 aaagtgaatcataccttgagggtgaagcaagttcacccttatatag 36267615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 3586378 - 3586481
Alignment:
Q  64 actccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttata 163  Q
    ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||||| ||||||| |||||||||||| |||||||||  || ||||||||    
T  3586378 actccgacgctcaagtcagtaatggaactgagaaaaagtgagtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttata 3586477  T
Q  164 tagg 167  Q
    ||||    
T  3586478 tagg 3586481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 12127780 - 12127638
Alignment:
Q  23 gtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaa 122  Q
    ||||| || ||| ||||||||||||||||| | || ||| |||||||||||||||||| |||| | |||| |||| | ||||||||||||||||||| ||    
T  12127780 gtcttcgcggtgggacgaaaggtacctgcaggcacgttagcactccaacgctcaagtcagtaatgaaactaagaacgtgtgtgtagaaagtgttgtgaaa 12127681  T
Q  123 agtgactcataccttgagagtgaagcaatgtcgcccttatata 165  Q
    ||||| |||||| |||   |||||||||||||  |||||||||    
T  12127680 agtgaatcatactttggtggtgaagcaatgtcaaccttatata 12127638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 24499803 - 24499912
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||| ||||||| ||||||||| || |||||||||  || |||||||    
T  24499803 cactccaacgctcaagtcagtaatggaaatgagaaagagtgtgtagaaaatgttgtgaaaagtgaatcataccttaagggtgaagcaagttcacccttat 24499902  T
Q  163 ataggtgtgc 172  Q
    | ||| ||||    
T  24499903 aaaggcgtgc 24499912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 59 - 168
Target Start/End: Complemental strand, 45258233 - 45258124
Alignment:
Q  59 ttaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgccc 158  Q
    |||||||||||| ||||||||  |||| | |||| ||||||| ||||| |||||||||||| ||||||| |||||||||||| ||||||||| ||| |||    
T  45258233 ttaacactccaaagctcaagtaagtaatgaaactaagaaagaatgtgtcgaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaaagtcaccc 45258134  T
Q  159 ttatataggt 168  Q
    ||||||||||    
T  45258133 ttatataggt 45258124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 27846638 - 27846512
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    ||||||| |||||  ||||||| || |||||| | || ||| |||||||||| ||||||| |||| |||||||||||| ||| |||||||||||||||||    
T  27846638 gagtcttcgcagttggacgaaaagtgcctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgagaaacagtttgtagaaagtgttgtgt 27846539  T
Q  121 aaagtgactcataccttgagagtgaag 147  Q
    ||||||| |  ||||||||| ||||||    
T  27846538 aaagtgaattgtaccttgagggtgaag 27846512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 19919169 - 19919039
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| |||||| | ||||||  |||| |||||  |||||  ||| |||| ||||||||||| |||||||||||||||| ||||||| ||||||||    
T  19919169 acgaaaggtgcctgcaggaacattagaactctaacgccaaagtcaataatggaaatgagaaagagtatgtagaaagtgttgtgaaaagtgaatcatacct 19919070  T
Q  137 tgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||  ||||||||| || | ||||||||||    
T  19919069 tgaggatgaagcaatatcactcttatatagg 19919039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 15825175 - 15825272
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |    ||||||||| |||||||||  || ||||| ||||||    
T  15825175 acgctcaagtcggtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtcatgtgtaccttgagggtgaagcaagttcacccttgtatagg 15825272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 45714983 - 45715111
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| | |||| | || ||| |||||||||||||||||| |||| | ||||||||||||||||||| ||||||| ||| ||| ||| ||||||||    
T  45714983 acgaaaggtgcatgcaggcacgttagcactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgtggtgaaaattgaatcatacct 45715082  T
Q  137 tgagagtgaagcaatgtcgcccttatata 165  Q
    |||  ||||||| | ||| ||||| ||||    
T  45715083 tgaaggtgaagctaagtcacccttgtata 45715111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 20120335 - 20120438
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    |||||||||  ||||| | || ||| |||||| || |||||||| |||| | |||||||||||||||||| ||||||| ||||  |||||| ||||||||    
T  20120335 acgaaaggtgtctgcaggcacgttagcactccgactctcaagtcagtaatgaaactgagaaagagtgtgtggaaagtggtgtgataagtgaatcatacct 20120434  T
Q  137 tgag 140  Q
    ||||    
T  20120435 tgag 20120438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 18770335 - 18770392
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtga 127  Q
    ||||||||||| |||| | || |||||||||||||||||||||||||||| |||||||    
T  18770335 acgctcaagtcagtaatgaaattgagaaagagtgtgtagaaagtgttgtgaaaagtga 18770392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 18135892 - 18135989
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||||||  |||| |||||||||||||||||||||  |||||||||  |||||||   |||||| ||  |||||||||  || ||||||||||||    
T  18135892 acgctcaagttagtaatggaactgagaaagagtgtgtaagaagtgttgtcaaaagtgatgtatacctagaaggtgaagcaagttcacccttatatagg 18135989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 18772296 - 18772365
Alignment:
Q  97 aagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatag 166  Q
    ||||||||||||||||||||||| ||||||||    |||||||| |||||||||  || |||||||||||    
T  18772296 aagagtgtgtagaaagtgttgtgaaaagtgacgtgcaccttgagggtgaagcaagttcacccttatatag 18772365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 23257803 - 23257917
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtg 169  Q
    ||||||||||| || | |||| ||| || |||||||||||||||| || | ||||||| |  ||||||||| ||||| ||| ||| |||||||||||| |    
T  23257803 acgctcaagtcagtgaaggaaatgacaaggagtgtgtagaaagtg-tgggaaaagtgaattgtaccttgagggtgaatcaaggtcacccttatataggcg 23257901  T
Q  170 tgcttgggaataaccg 185  Q
    ||  || |||||||||    
T  23257902 tgtgtgagaataaccg 23257917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 165
Target Start/End: Complemental strand, 10923242 - 10923140
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||| || |||||||| || | |||||| | ||||||||||||||||||| |||| |||||||    | ||||||| |||||||||  || |||||||    
T  10923242 cactccgacactcaagtcagttatggaacttataaagagtgtgtagaaagtgctgtgaaaagtgaagtgtgccttgagggtgaagcaagttcacccttat 10923143  T
Q  163 ata 165  Q
    |||    
T  10923142 ata 10923140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 19050505 - 19050408
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||||||| ||||  ||||| |||||||| |||||  |||||||||| |||||||    |||| ||||||||||| ||  || ||||||||||||    
T  19050505 acgctcaagtcagtaatagaactaagaaagagagtgtaagaagtgttgtgaaaagtgatgtgtaccctgagagtgaagtaagttcacccttatatagg 19050408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 24755483 - 24755556
Alignment:
Q  64 actccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacctt 137  Q
    |||||||| |||||||| || | ||||||  |||| |||||||||||| ||||||| ||||||| || ||||||    
T  24755483 actccaaccctcaagtcagtgatggaactctgaaaaagtgtgtagaaattgttgtgaaaagtgaatcgtacctt 24755556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 29711032 - 29711134
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||||||||||||||||  ||| |||| |||  ||||| |||||  |||||||||| |||||||    ||||||||| |||||||||  || |||||||    
T  29711032 cactccaacgctcaagtcactaatggaattga--aagagagtgtacgaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttat 29711129  T
Q  163 atagg 167  Q
    |||||    
T  29711130 atagg 29711134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 47253291 - 47253395
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||| ||||||| | ||| |||||||    
T  47253291 cactccaacgctcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgttgtgaaaagtgaatcataccttgagggtgaagctaagtcacccttat 47253390  T
Q  163 atagg 167  Q
    |||||    
T  47253391 atagg 47253395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 12683757 - 12683903
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    |||||||||| |||  ||||||||| |||||| | || ||| |||||||||||||||||  |||| | |||||||||||||||||||||||||||||||     
T  12683757 gagtctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagttagtaatgaaactgagaaagagtgtgtagaaagtgttgtga 12683856  T
Q  121 aaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||| ||||||||| || |||||||||  || ||||||| ||||    
T  12683857 aaagtgaatcataccttaagggtgaagcaagttcacccttatctagg 12683903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 19643694 - 19643825
Alignment:
Q  41 aaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgag 140  Q
    ||||| || ||| |||| ||| || ||| ||||| ||||| |||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  19643694 aaggtgcccgcaggtacgttaccaatccgacgcttaagtcagtaatggaactgagaaagagtgtgtagaaagtcttgtgaaaagtgaatcataccttgag 19643793  T
Q  141 agtgaagcaatgtcgcccttatataggtgtgc 172  Q
     ||||| |||  || |||||||||||| ||||    
T  19643794 ggtgaaacaagttcacccttatataggcgtgc 19643825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 19809715 - 19809819
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||| |||| | |||| |||||||||||||||||||||||||| ||||||| | |||||||||| ||||| | | ||| ||||||     
T  19809715 cactccaacgctcaagtcagtaatgaaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagggtgaaactaagtcacccttac 19809814  T
Q  163 atagg 167  Q
    |||||    
T  19809815 atagg 19809819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 29157116 - 29157220
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||  |||| |||||||||||| ||||||||| ||||||||||||||||||  ||||||||||  |||||| ||  || |||||||    
T  29157116 cactccaacgctcaagttagtaatggaactgagaaaaagtgtgtagtaagtgttgtgtaaagtgaaccataccttgatggtgaagtaagttcacccttat 29157215  T
Q  163 atagg 167  Q
    |||||    
T  29157216 atagg 29157220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 15514638 - 15514534
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||  |||||||||| |||||||    ||||||||| |||||||||  || |||||||    
T  15514638 cactccaacgctcaagtcagtaatggaactgaaaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagggtgaagcaagttcacccttat 15514539  T
Q  163 atagg 167  Q
    |||||    
T  15514538 atagg 15514534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 15742223 - 15742126
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||||||| |||| |||||||||||| ||||||||  |||||||||| |||||||    |||||||||| ||||||||  || ||||||||||||    
T  15742223 acgctcaagtcagtaatggaactgagaaaaagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagactgaagcaaattcacccttatatagg 15742126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 5518554 - 5518658
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||| ||||||||||||| ||||  ||||||||| ||| ||||||  |||||||||| |||||||  | ||||||||| |||||||||  || |||||||    
T  5518554 cacttcaacgctcaagtcagtaattgaactgagagagaatgtgtaagaagtgttgtggaaagtgatgcgtaccttgagggtgaagcaagttcacccttat 5518653  T
Q  163 atagg 167  Q
    |||||    
T  5518654 atagg 5518658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 16012575 - 16012504
Alignment:
Q  36 gacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgta 107  Q
    |||||| |||||||||| | || |||||||||| ||||||||||| |||| |||||||||| ||||||||||    
T  16012575 gacgaatggtacctgcaggcacgttaacactccgacgctcaagtcagtaatggaactgagatagagtgtgta 16012504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 10981838 - 10981932
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgt 115  Q
    ||||||| |||||| |||||||||| ||||||   || ||  ||||||||| |||||||| |||| ||||| ||||||||||||||| |||||||    
T  10981838 gagtcttcgcagtgggacgaaaggtgcctgcagcaacgttggcactccaacactcaagtcagtaatggaaccgagaaagagtgtgtaaaaagtgt 10981932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 2674616 - 2674549
Alignment:
Q  98 agagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatata 165  Q
    |||||||||||||||||||||| ||||||| ||||||||||||  ||||| ||  || ||||||||||    
T  2674616 agagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagtaagttcacccttatata 2674549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 14003134 - 14003088
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgtt 116  Q
    ||||||||||| |||| |||||||||||||||| ||| |||||||||    
T  14003134 acgctcaagtcagtaatggaactgagaaagagtttgtggaaagtgtt 14003088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 19818741 - 19818783
Alignment:
Q  97 aagagtgtgtagaaagtgttgtgtaaagtgactcataccttga 139  Q
    ||||||||||||||||||||||| ||||||| | |||||||||    
T  19818741 aagagtgtgtagaaagtgttgtgaaaagtgaattataccttga 19818783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 14602089 - 14602029
Alignment:
Q  66 tccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtg 126  Q
    ||||||||||||||| |||| | |||||| | ||||||||||  |||||||||| ||||||    
T  14602089 tccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtg 14602029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 22903107 - 22903209
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| |||| || |||||||    
T  22903107 cacttcaacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaaacaatatcacccttat 22903206  T
Q  163 ata 165  Q
    |||    
T  22903207 ata 22903209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 20025250 - 20025419
Alignment:
Q  16 tcaaggagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgt 115  Q
    |||| ||||||| || ||| ||||||||||  |||||   || ||||||||||||||||   ||| | || | |||||||||||||||||||||||||||    
T  20025250 tcaatgagtcttcgcggtgggacgaaaggtgtctgcacacacgttaacactccaacgctactgtcaggaatgaaactgagaaagagtgtgtagaaagtgt 20025349  T
Q  116 tgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtgtgcttgggaataaccg 185  Q
    |||||||||||| |||| ||||||| ||||||| | ||| |||||||| ||| | || || |||||||||    
T  20025350 tgtgtaaagtgaatcattccttgagggtgaagctaggtcacccttatacaggcgcgcgtgagaataaccg 20025419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 26994683 - 26994579
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||| ||||||||||| |||| |||| ||||||||||||| ||||| |||||||| ||||||| |||||||||| | ||||||||| ||| |||||||    
T  26994683 cactccgacgctcaagtcagtaatggaattgagaaagagtgtttagaaggtgttgtgaaaagtgaatcataccttgggggtgaagcaaggtcacccttat 26994584  T
Q  163 atagg 167  Q
    |||||    
T  26994583 atagg 26994579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 25537393 - 25537523
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| |||||||| || ||| ||||||||||||||||   |||| |||||||||||||| ||||||  |||||||||| |||||||   ||||||    
T  25537393 acgaaaggtgcctgcaagcacgttagcactccaacgctcaagattgtaatggaactgagaaagattgtgtatgaagtgttgtgaaaagtgatgtatacct 25537492  T
Q  137 tgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||| |||||| ||  || ||||||||||||    
T  25537493 tgagggtgaagaaagttcacccttatatagg 25537523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 176
Target Start/End: Original strand, 24647298 - 24647415
Alignment:
Q  59 ttaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgccc 158  Q
    ||||||||||||||||||| || |||| |||||||| ||||||||||||  |||||||||| |||||||   ||||||| || |||||||||  || |||    
T  24647298 ttaacactccaacgctcaattcagtaatggaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtataccttaagggtgaagcaagttcaccc 24647397  T
Q  159 ttatataggtgtgcttgg 176  Q
    ||||||||| | ||||||    
T  24647398 ttatataggcgcgcttgg 24647415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 25333724 - 25333836
Alignment:
Q  38 cgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacctt 137  Q
    |||||||||| |||| | | ||||  ||||| ||||||||||| |||| | |||| ||| |||||||||||||||||||||  ||||||| |||||| ||    
T  25333724 cgaaaggtacttgcaggcatattagtactccgacgctcaagtcagtaatgtaactaagagagagtgtgtagaaagtgttgttaaaagtgaatcatacttt 25333823  T
Q  138 gagagtgaagcaa 150  Q
    |||||||||||||    
T  25333824 gagagtgaagcaa 25333836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 27083314 - 27083231
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaag 147  Q
    ||||||||| |||||||| |||| | ||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  27083314 cactccaacactcaagtcagtaa-gaaactgtgaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaag 27083231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 8938900 - 8939028
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| | |||| | || |||||||||||| |||| |||| |||  ||||||||||||||||||||| |||||| || | ||||||| |||||| |    
T  8938900 acgaaaggtgcatgcaggcacgttaacactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgggaaaagtgaatcatacat 8938998  T
Q  137 tgagagtgaagcaatgtcgcccttatatag 166  Q
    |||| ||||||| | ||| || ||||||||    
T  8938999 tgagggtgaagctaagtcaccgttatatag 8939028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 22865735 - 22865884
Alignment:
Q  23 gtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaa 122  Q
    ||||| ||||||  ||||||||| | |||| |||| ||| ||||   ||||||||||  |||| |||||||||||| ||||||||  || ||||||| ||    
T  22865735 gtcttcgcagtggaacgaaaggtgcatgcaggtacgttagcactttgacgctcaagttagtaatggaactgagaaaaagtgtgtaagaaatgttgtgaaa 22865834  T
Q  123 agtgactcataccttgagagtgaagcaatgtcgcccttatataggtgtgc 172  Q
    |||||    ||||||||| |||||||||  || |||||||||||| ||||    
T  22865835 agtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtgc 22865884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 32418565 - 32418476
Alignment:
Q  61 aacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaa 150  Q
    |||||||  |||||||||||  | | ||||| ||||||||||||||||| ||||||||| | ||||| ||||||||||||  ||||||||    
T  32418565 aacactctgacgctcaagtcactgatggaacagagaaagagtgtgtagagagtgttgtgaagagtgaatcataccttgaggatgaagcaa 32418476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 19993249 - 19993186
Alignment:
Q  56 acattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtg 119  Q
    |||||| || |||||  |||||||| |||| ||||||||||||||| |||| ||||||||||||    
T  19993249 acattagcagtccaatactcaagtcagtaatggaactgagaaagagcgtgttgaaagtgttgtg 19993186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 34493567 - 34493610
Alignment:
Q  103 gtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaa 146  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||    
T  34493567 gtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaa 34493610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 26163623 - 26163691
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtg 105  Q
    ||||||||| | |||| | |||||| |||||||||||||||||| | || | |||| ||||||||||||    
T  26163623 acgaaaggtgcatgcatgcacattagcactccaacgctcaagtcagaaatgaaactaagaaagagtgtg 26163691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 64; Significance: 3e-28; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 95910 - 95783
Alignment:
Q  40 aaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttga 139  Q
    |||||| |||||| | || ||| |||| ||||||||||||  |||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||| |    
T  95910 aaaggttcctgcaggcacgttaccacttcaacgctcaagttagtaatggaactgagaaagagtgcgtagaaagtgttgtgaaaagtgaatcataccttca 95811  T
Q  140 gagtgaagcaatgtcgcccttatatagg 167  Q
    | ||||||||| ||| ||||||||||||    
T  95810 gggtgaagcaacgtcacccttatatagg 95783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 8e-26; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 5863187 - 5863326
Alignment:
Q  49 tgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagc 148  Q
    |||||| || ||| ||||| |||||||||||| ||||  |||||||||||||||||||||||| ||||||  ||||||| |||||||||||| ||| |||    
T  5863187 tgcaagcacgttagcactcaaacgctcaagtcagtaatcgaactgagaaagagtgtgtagaaaatgttgtaaaaagtgaatcataccttgagggtggagc 5863286  T
Q  149 aatgtcgcccttatataggtgtgc-ttgggaataaccgcc 187  Q
    |||||| ||||| |||||| | || |||| ||||||||||    
T  5863287 aatgtcacccttgtataggcgcgcgttggaaataaccgcc 5863326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 26763013 - 26762884
Alignment:
Q  38 cgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacctt 137  Q
    |||||||| | |||| | || ||| |||||||||||||||||| |||| |||||| | ||| |||||||||||||||||||| ||||||| |||||||||    
T  26763013 cgaaaggttcttgcaggcacgttagcactccaacgctcaagtcagtaaaggaactcataaatagtgtgtagaaagtgttgtgaaaagtgaatcatacctt 26762914  T
Q  138 gagagtgaagcaatgtcgcccttatatagg 167  Q
    ||| ||||||||| | | ||| ||||||||    
T  26762913 gagggtgaagcaaggacacccatatatagg 26762884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 9135438 - 9135335
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||| |||||||||||| |||| |||| |||||||||||||||| ||| ||||||| ||||||| |||||||||||| |||||||||  || |||||||    
T  9135438 cactctaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaactgttgtgaaaagtgaatcataccttgagggtgaagcaaattcacccttat 9135339  T
Q  163 atag 166  Q
    ||||    
T  9135338 atag 9135335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 9868058 - 9867939
Alignment:
Q  21 gagtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgt 120  Q
    ||||||| || ||| |||||||||| | |||| | || ||| |||||  ||||||||||| |||| ||||||||| |||||| |||||||||||||||      
T  9868058 gagtcttcgcggtgggacgaaaggtgcatgcaggaacgttagcactctgacgctcaagtcagtaatggaactgaggaagagtttgtagaaagtgttgtta 9867959  T
Q  121 aaagtgactcataccttgag 140  Q
    ||||||| ||||||||||||    
T  9867958 aaagtgaatcataccttgag 9867939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 29373489 - 29373564
Alignment:
Q  92 tgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||||||||| |||| |||||||    
T  29373489 tgagaaagagtgtgtagaaaatgttgtgaaaattgaatcataccttgagggtgaagcaatgtcaccctcatatagg 29373564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 39879375 - 39879505
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    ||||||||| ||||||   || ||||||||  |||||||||||| |||| | ||||||||||||||||||| ||||||||||  ||||||| |||| ||     
T  39879375 acgaaaggtgcctgcagacacgttaacactttaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgttgtaaaaagtgaatcatgcca 39879474  T
Q  137 tga-gagtgaagcaatgtcgcccttatatag 166  Q
    ||| | | ||||||||||| |||||||||||    
T  39879475 tgaggggggaagcaatgtcacccttatatag 39879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 21161255 - 21161326
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatac 134  Q
    |||||||||||||||||| |||| ||| || |||||| ||||||||||||||||||| ||||||| ||||||    
T  21161255 cactccaacgctcaagtcagtaatggagctaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatac 21161326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 7486559 - 7486633
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacctt 137  Q
    ||||||||||||||| || |||| |||||||||||||| ||||||||| |||||||| ||||||| |||| ||||    
T  7486559 cactccaacgctcaattcagtaatggaactgagaaagattgtgtagaaggtgttgtgaaaagtgaatcatccctt 7486633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 167
Target Start/End: Complemental strand, 13292224 - 13292096
Alignment:
Q  39 gaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttg 138  Q
    |||||||  ||||| |||| ||| ||||| |||||||||||| |||| | |||||| ||||||||||||  |||||||||| |||||||    |||||||    
T  13292224 gaaaggtgtctgcaggtacgttagcactctaacgctcaagtcagtaatgaaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttg 13292125  T
Q  139 agagtgaagcaatgtcgcccttatatagg 167  Q
    || |||||||||  || || |||||||||    
T  13292124 agggtgaagcaagttcaccattatatagg 13292096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 12644799 - 12644887
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgtt-gtgtaaagtgactcataccttgagagtgaagcaa 150  Q
    |||||| ||||||| ||| |||| |||||||||||| ||||||| ||||||||| ||| ||||||| |  ||| ||||| |||||||||    
T  12644799 cactccgacgctcaggtcagtaatggaactgagaaaaagtgtgtggaaagtgttggtgaaaagtgaattgtacgttgagggtgaagcaa 12644887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 16203768 - 16203840
Alignment:
Q  95 gaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||||||||| |||||||| || |||||||  |||||||| || |||||| || ||| ||||||||||||    
T  16203768 gaaagagtgtgtataaagtgttatgaaaagtgaaccataccttaagggtgaagaaaagtcacccttatatagg 16203840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 10287667 - 10287596
Alignment:
Q  69 aacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgag 140  Q
    |||||||||||| |||| ||| |||||||| ||||||||  |||||||||| |||||||   ||||||||||    
T  10287667 aacgctcaagtcagtaatggatctgagaaaaagtgtgtaagaagtgttgtgaaaagtgagagataccttgag 10287596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 16204340 - 16204409
Alignment:
Q  98 agagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||||||||| ||||||||||| |||||||  |||||||| || |||||| ||  || ||||||||||||    
T  16204340 agagtgtgtataaagtgttgtgaaaagtgaaccataccttaagggtgaagaaaattcacccttatatagg 16204409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 43172065 - 43172009
Alignment:
Q  111 agtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||||| ||||||| |||||| ||||| |||||||||  || ||||||||||||    
T  43172065 agtgttgtgaaaagtgaatcatacattgagggtgaagcaacttcacccttatatagg 43172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 15507 - 15401
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||| |||||| |||| |||| |||||||||||||||| | |||||||||||||| ||||||| |||||||||||| |||||||||  || |||||||    
T  15507 cactccgacgctccagtcagtaatggaactgagaaagagtatctagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttat 15408  T
Q  163 ataggtg 169  Q
    |||||||    
T  15407 ataggtg 15401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 8647 - 8571
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaa 146  Q
    ||||||||||| |||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||| || |||||    
T  8647 acgctcaagtcagtaatgaaactgaaaaacagtgtgtagaaagtgttgtgaaaagtgaatcataccttaagggtgaa 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 68877 - 68775
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||  |||| |||||||||||||||| |  ||||||||||||| ||||||| |||||||||||| | ||||||| ||| |||||||    
T  68877 cactccaacgctcaagttagtaatggaactgagaaagagtat--agaaagtgttgtgaaaagtgaatcataccttgagggagaagcaaggtcacccttat 68780  T
Q  163 atagg 167  Q
    |||||    
T  68779 atagg 68775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 6321 - 6416
Alignment:
Q  72 gctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||| || ||||||||| |||||||||  ||  |||||||||||    
T  6321 gctcaagtcagtaatggaactgagaaatagtgtgtagaaagtgttgtgaaaagtgagtcgtaccttgagcgtgaagcaagttcatccttatatagg 6416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 7899 - 8002
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    ||||| ||||||||| || |||| | || |||||||||||||||||||||||||||| ||||||| |||||  ||||| ||||| ||||||| || ||||    
T  7899 cactctaacgctcaaatcagtaatgcaattgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataatttgagtgtgaaacaatgtcaccattat 7998  T
Q  163 atag 166  Q
    ||||    
T  7999 atag 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 22860 - 23006
Alignment:
Q  23 gtctttgcagtgcgacgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaa 122  Q
    ||||| |||||| |||||||||| |||||  | || ||| |||||  ||||||||||| |||| ||||||||||||  |||||||  |||||||||| ||    
T  22860 gtcttcgcagtgggacgaaaggtgcctgcgggcacgttagcactctgacgctcaagtcagtaatggaactgagaaatcgtgtgtaagaagtgttgtgaaa 22959  T
Q  123 agtgactcataccttgagagtgaagcaatgtcgcccttatataggtg 169  Q
    ||||||   ||||||||| |||||||||  || ||||||| ||||||    
T  22960 agtgacgtgtaccttgagggtgaagcaagttcacccttatgtaggtg 23006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 10992 - 10928
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtga 127  Q
    ||||||||||||||||||  ||| |||||||| | ||||||||||  |||||||||| |||||||    
T  10992 cactccaacgctcaagtcaataatggaactgaaagagagtgtgtaagaagtgttgtgaaaagtga 10928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 121075 - 120984
Alignment:
Q  76 aagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| |||||||    ||||||||| |||||||||  || ||||||||||||    
T  121075 aagtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaaattcacccttatatagg 120984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 379743 - 379834
Alignment:
Q  76 aagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatatagg 167  Q
    ||||| |||| |||||||||||||||||||||  |||||||||| |||||||    ||||||||| |||||||||  || ||| ||||||||    
T  379743 aagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccgtatatagg 379834  T

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Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 320 - 256
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtga 127  Q
    |||||| ||||||||||| |||| |||||||||||||||||||||  |||||||||| |||||||    
T  320 cactccgacgctcaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtga 256  T

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Target: scaffold0074 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 35277 - 35323
Alignment:
Q  73 ctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtg 119  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  35277 ctcaagtcagtaacggaactgagaaagagtgtgtggaaagtgttgtg 35323  T

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Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 20567 - 20510
Alignment:
Q  70 acgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtga 127  Q
    |||||||||||  ||| ||||||||||||||||||||||||| |||| || |||||||    
T  20567 acgctcaagtcactaaaggaactgagaaagagtgtgtagaaaatgttatgaaaagtga 20510  T

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Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 40810 - 40919
Alignment:
Q  63 cactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttat 162  Q
    |||||||||||||||||| || | |||||||| | |||| |||||| ||||||| || |||||||    ||||||||| |||||||||  || ||||| |    
T  40810 cactccaacgctcaagtcagtgatggaactgaaagagagagtgtaggaagtgttatgaaaagtgatgtgtaccttgagggtgaagcaagttcaccctttt 40909  T
Q  163 ataggtgtgc 172  Q
    ||||| ||||    
T  40910 ataggcgtgc 40919  T

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Target: scaffold0479 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 5078 - 5161
Alignment:
Q  89 aactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaatgtcgcccttatataggtgtgc 172  Q
    |||||||||||  ||||||  |||||||||| ||||||||    |||||||| |||||||||  || |||||||||||||||||    
T  5078 aactgagaaaggttgtgtaagaagtgttgtgaaaagtgacgtgaaccttgagggtgaagcaagttcacccttatataggtgtgc 5161  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 73846 - 73792
Alignment:
Q  96 aaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagagtgaagcaa 150  Q
    |||||||| ||||||||||||||| ||||| | ||||||||| || |||||||||    
T  73846 aaagagtgcgtagaaagtgttgtgaaaagtaaatcataccttcagggtgaagcaa 73792  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 4527 - 4397
Alignment:
Q  37 acgaaaggtacctgcaagtacattaacactccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcatacct 136  Q
    |||||||||  ||||||| || ||| ||||||||||||||||||  ||| | |||||| | |||| |||||  ||||||| || ||| |||    |||||    
T  4527 acgaaaggtgtctgcaagcacgttagcactccaacgctcaagtcactaatgaaactgaaagagagagtgtaagaagtgttatgaaaaatgatgtgtacct 4428  T
Q  137 tgagagtgaagcaatgtcgcccttatatagg 167  Q
    |||| |||||||||  || ||||||||||||    
T  4427 tgagggtgaagcaagttcacccttatatagg 4397  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 215289 - 215349
Alignment:
Q  66 tccaacgctcaagtcggtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtg 126  Q
    ||||||||||||||| |||| | |||||| | ||||||||||  |||||||||| ||||||    
T  215289 tccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtg 215349  T

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