View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7026_low_4 (Length: 682)

Name: NF7026_low_4
Description: NF7026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7026_low_4
NF7026_low_4
[»] chr4 (5 HSPs)
chr4 (20-671)||(2878566-2879217)
chr4 (20-274)||(2888068-2888322)
chr4 (21-275)||(2896044-2896298)
chr4 (417-590)||(2895769-2895942)
chr4 (413-580)||(2888427-2888594)
[»] chr2 (7 HSPs)
chr2 (33-271)||(44209788-44210026)
chr2 (74-256)||(44221998-44222180)
chr2 (74-256)||(44232824-44233006)
chr2 (504-576)||(44232518-44232590)
chr2 (435-576)||(44209486-44209627)
chr2 (435-576)||(44221700-44221841)
chr2 (501-574)||(43455629-43455702)
[»] chr8 (1 HSPs)
chr8 (481-545)||(4502991-4503055)
[»] chr7 (7 HSPs)
chr7 (499-547)||(39536651-39536699)
chr7 (489-547)||(39545968-39546026)
chr7 (498-547)||(1083275-1083324)
chr7 (498-547)||(39340177-39340226)
chr7 (500-548)||(39354999-39355047)
chr7 (480-547)||(39562774-39562841)
chr7 (132-178)||(39563086-39563132)
[»] chr1 (2 HSPs)
chr1 (423-575)||(2147362-2147514)
chr1 (477-576)||(2159232-2159331)
[»] chr3 (1 HSPs)
chr3 (429-575)||(49774608-49774754)


Alignment Details
Target: chr4 (Bit Score: 648; Significance: 0; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 648; E-Value: 0
Query Start/End: Original strand, 20 - 671
Target Start/End: Original strand, 2878566 - 2879217
Alignment:
Q  20 ttatacactattgttcaggagaaataagcaacttatagaagaattgggaaaacttgctcttggttccaaggatctttatttccctagccaatactcacaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2878566 ttatacactattgttcaggagaaataagcaacttatagaagaattgggaaaacctgctcttggttccaaggatctttatttccctagccaatactcacaa 2878665  T
Q  120 tcatttttagttcaatgcttggcttgcttgtggaaacaacgttggtcatattggcgcaacccgttatacactgctgttaggttttactttgctactttca 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2878666 tcatttttagttcaatgcttggcttgcttgtggaaacaacgttggtcatattggcgcaacccgttatacactgctgttaggttttactttgctactttca 2878765  T
Q  220 tagcattgatgtttggaacaatgttttgggacctcggacgcaaatagtaagtgaaaacttccaaaatctataaatatgacaatagcttattgaatttgca 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2878766 tagcattgatgtttggaacaatgttttgggacctcggacgcaaatagtaagtgaaaacttccaaaatctataaatatgacaatagcttattgaatttgca 2878865  T
Q  320 cttaatcaaaatatttatccaaacaccgtttagttgatatttcatttccacttgaattgtgatgcctttcgtggattccagcacaagaggactagacctg 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2878866 cttaatcaaaatatttatccaaacaccgtttagttgatatttcatttccacttgaattgtgatgcctttcgtggattccagcacaagaggactagacctg 2878965  T
Q  420 tctaatgccatgggctcaatgtacactgctgttttcttcattggggtccaaaattcagcctcagtacaaccagtagtagctgttgaaagaactgtttttt 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2878966 tctaatgccatgggctcaatgtacactgctgttttcttcattggggtccaaaattcagcctcagtacaaccagtagtagctgttgaaagaactgtttttt 2879065  T
Q  520 atagagaaagagctgctggaatgtattctgccttaccctatgcacttgcacaggtaataaaatcactatttcacacacaagataaatgtatttgcactat 619  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2879066 atagagaaagagctgctggaatgtattctgccttaccctatgcacttgcacaggtaataaaatcactatttcacacacaagataaatgtatttgcactat 2879165  T
Q  620 gctttatttacatactcatgttaatctaacttgctctcttttgtcacaggtt 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2879166 gctttatttacatactcatgttaatctaacttgctctcttttgtcacaggtt 2879217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 20 - 274
Target Start/End: Original strand, 2888068 - 2888322
Alignment:
Q  20 ttatacactattgttcaggagaaataagcaacttatagaagaattgggaaaacttgctcttggttccaaggatctttatttccctagccaatactcacaa 119  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| || |||| ||| | |||||| || |||||||||||| ||  |||||||||||||    
T  2888068 ttataaactattgttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaa 2888167  T
Q  120 tcatttttagttcaatgcttggcttgcttgtggaaacaacgttggtcatattggcgcaacccgttatacactgctgttaggttttactttgctactttca 219  Q
    ||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||  ||||||| |||| ||||||| |||  ||  |||||    
T  2888168 tcatttttagtccaatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttca 2888267  T
Q  220 tagcattgatgtttggaacaatgttttgggacctcggacgcaaatagtaagtgaa 274  Q
    |||  ||||||||||||||||| |||||||| || ||| | ||||||||||||||    
T  2888268 taggcttgatgtttggaacaatattttgggatcttggaaggaaatagtaagtgaa 2888322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 21 - 275
Target Start/End: Complemental strand, 2896298 - 2896044
Alignment:
Q  21 tatacactattgttcaggagaaataagcaacttatagaagaattgggaaaacttgctcttggttccaaggatctttatttccctagccaatactcacaat 120  Q
    |||| |||||| || |||||||| ||||||||||||| |||||| || |||| ||||| |||||| ||||||||| ||||| |   ||||||||||||||    
T  2896298 tataaactattctttaggagaaacaagcaacttatagtagaattaggcaaacctgctcctggttctaaggatcttcatttctccgcccaatactcacaat 2896199  T
Q  121 catttttagttcaatgcttggcttgcttgtggaaacaacgttggtcatattggcgcaacccgttatacactgctgttaggttttactttgctactttcat 220  Q
    ||||||   | ||||||||||||||| | |||||||||| ||||||||| |||||||| |||  |||||||||||| ||||||| |||  ||||||||||    
T  2896198 cattttggatccaatgcttggcttgcctatggaaacaacattggtcatactggcgcaatccgccatacactgctgtgaggtttttcttcactactttcat 2896099  T
Q  221 agcattgatgtttggaacaatgttttgggacctcggacgcaaatagtaagtgaaa 275  Q
    |||||||||||||||||||||||| ||| |||| ||| | |||||||||||||||    
T  2896098 agcattgatgtttggaacaatgttctggaaccttggaaggaaatagtaagtgaaa 2896044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 417 - 590
Target Start/End: Complemental strand, 2895942 - 2895769
Alignment:
Q  417 ctgtctaatgccatgggctcaatgtacactgctgttttcttcattggggtccaaaattcagcctcagtacaaccagtagtagctgttgaaagaactgttt 516  Q
    |||| ||||||| | || || ||||| ||||||||| ||||| |||||||||| |||||| | || |||||||| || ||||||||||||||| |||| |    
T  2895942 ctgtttaatgccctcggttcgatgtatactgctgttctcttccttggggtccagaattcatcgtctgtacaacccgtggtagctgttgaaagatctgtct 2895843  T
Q  517 tttatagagaaagagctgctggaatgtattctgccttaccctatgcacttgcacaggtaataaaatcactattt 590  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  2895842 tctatagagaaagagctgctggaatgtattctgccttaccctatgcatttgcacaggtaataaaatcaccattt 2895769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 2888427 - 2888594
Alignment:
Q  413 agacctgtctaatgccatgggctcaatgtacactgctgttttcttcattggggtccaaaattcagcctcagtacaaccagtagtagctgttgaaagaact 512  Q
    |||||||| ||||||| | || || ||||| ||||||||| ||||| |||||||||| |||||| |  | ||||||||||| ||||| ||||||||| ||    
T  2888427 agacctgtttaatgccctcggttcgatgtatactgctgttctcttccttggggtccagaattcatcagctgtacaaccagtggtagcagttgaaagatct 2888526  T
Q  513 gttttttatagagaaagagctgctggaatgtattctgccttaccctatgcacttgcacaggtaataaa 580  Q
    || || |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  2888527 gtgttctatagagaaagagctgctgggatgtattctgccttaccttatgcatttgcacaggtaataaa 2888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 8e-32; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 33 - 271
Target Start/End: Complemental strand, 44210026 - 44209788
Alignment:
Q  33 ttcaggagaaataagcaacttatagaagaattgggaaaacttgctcttggttccaaggatctttatttccctagccaatactcacaatcatttttagttc 132  Q
    ||||||||||| |||||||||||  ||||| | ||    | ||||| |||||| ||||||||| |||||||||  |||| ||| || || || || || |    
T  44210026 ttcaggagaaacaagcaacttattcaagaacttggcgtgcctgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggtcc 44209927  T
Q  133 aatgcttggcttgcttgtggaaacaacgttggtcatattggcgcaacccgttatacactgctgttaggttttactttgctactttcatagcattgatgtt 232  Q
    |||||  ||| ||||| |||||||||||||||||||||||||| || ||   |||||||||||| ||||||| |||  | || |||||||| ||||||||    
T  44209926 aatgccaggcctgcttatggaaacaacgttggtcatattggcgtaatccaccatacactgctgtgaggtttttcttcacgacattcatagccttgatgtt 44209827  T
Q  233 tggaacaatgttttgggacctcggacgcaaatagtaagt 271  Q
    |||||||||||| |||||||||||  ||||| |||||||    
T  44209826 tggaacaatgttctgggacctcggtggcaaacagtaagt 44209788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 74 - 256
Target Start/End: Complemental strand, 44222180 - 44221998
Alignment:
Q  74 tgctcttggttccaaggatctttatttccctagccaatactcacaatcatttttagttcaatgcttggcttgcttgtggaaacaacgttggtcatattgg 173  Q
    ||||| |||||| ||||||||| |||||||||  |||| ||| || || || || |||||||||  ||| ||||| ||||||||||||||||||||||||    
T  44222180 tgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggttcaatgccaggcctgcttatggaaacaacgttggtcatattgg 44222081  T
Q  174 cgcaacccgttatacactgctgttaggttttactttgctactttcatagcattgatgtttggaacaatgttttgggacctcgg 256  Q
    || || ||   |||||||||||| ||||||| |||  |||| |||||||  |||||||||||||||||||| |||||||||||    
T  44222080 cgtaatccaccatacactgctgtgaggtttttcttcactaccttcataggcttgatgtttggaacaatgttctgggacctcgg 44221998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 256
Target Start/End: Complemental strand, 44233006 - 44232824
Alignment:
Q  74 tgctcttggttccaaggatctttatttccctagccaatactcacaatcatttttagttcaatgcttggcttgcttgtggaaacaacgttggtcatattgg 173  Q
    ||||| |||||| ||||||||| |||||||||  |||| ||| || || || || || ||||||  ||| ||||| ||||||||||||||||||||||||    
T  44233006 tgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggtccaatgccaggcctgcttatggaaacaacgttggtcatattgg 44232907  T
Q  174 cgcaacccgttatacactgctgttaggttttactttgctactttcatagcattgatgtttggaacaatgttttgggacctcgg 256  Q
    || || ||   |||||||||||| ||||||| |||  |||| |||||||  |||||||||||||||||||| |||||||||||    
T  44232906 cgtaatccaccatacactgctgtgaggtttttcttcactacattcataggcttgatgtttggaacaatgttctgggacctcgg 44232824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 504 - 576
Target Start/End: Complemental strand, 44232590 - 44232518
Alignment:
Q  504 gaaagaactgttttttatagagaaagagctgctggaatgtattctgccttaccctatgcacttgcacaggtaa 576  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| || |||||||||    
T  44232590 gaaagaactgtattttatagagaaaaagctgctggaatgtactctgccttaccctatgcattttcacaggtaa 44232518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 435 - 576
Target Start/End: Complemental strand, 44209627 - 44209486
Alignment:
Q  435 tcaatgtacactgctgttttcttcattggggtccaaaattcagcctcagtacaaccagtagtagctgttgaaagaactgttttttatagagaaagagctg 534  Q
    |||||||| || |||||| ||||| |||| || ||||||||  | || || || || || || || || ||||||||||| ||| ||||||||| |||||    
T  44209627 tcaatgtataccgctgttctcttccttggagtgcaaaattcttcttctgtgcagccggtggttgcagtggaaagaactgtatttaatagagaaaaagctg 44209528  T
Q  535 ctggaatgtattctgccttaccctatgcacttgcacaggtaa 576  Q
    |||||||||| |||||||||||||||||| || |||||||||    
T  44209527 ctggaatgtactctgccttaccctatgcattttcacaggtaa 44209486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 435 - 576
Target Start/End: Complemental strand, 44221841 - 44221700
Alignment:
Q  435 tcaatgtacactgctgttttcttcattggggtccaaaattcagcctcagtacaaccagtagtagctgttgaaagaactgttttttatagagaaagagctg 534  Q
    |||||||| || |||||| ||||| |||| || ||||||||  | || || || || || || || |||||||| ||||| |||||| ||||||  ||||    
T  44221841 tcaatgtataccgctgttctcttccttggagtacaaaattcttcttctgtgcagccggtggttgcagttgaaaggactgtattttatcgagaaaaggctg 44221742  T
Q  535 ctggaatgtattctgccttaccctatgcacttgcacaggtaa 576  Q
    |||||||||||||||||||||| |||||| || |||||||||    
T  44221741 ctggaatgtattctgccttaccatatgcattttcacaggtaa 44221700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 574
Target Start/End: Complemental strand, 43455702 - 43455629
Alignment:
Q  501 gttgaaagaactgttttttatagagaaagagctgctggaatgtattctgccttaccctatgcacttgcacaggt 574  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| || || ||||| |||||    
T  43455702 gttgaaagaactgtattctatcgagaaagagctgctggaatgtattctgctttaccttacgcccttgctcaggt 43455629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 545
Target Start/End: Original strand, 4502991 - 4503055
Alignment:
Q  481 cagtacaaccagtagtagctgttgaaagaactgttttttatagagaaagagctgctggaatgtat 545  Q
    |||| |||||||| |||||  |||||||||| || || |||||||||||||||||||||||||||    
T  4502991 cagttcaaccagttgtagccattgaaagaacagtgttctatagagaaagagctgctggaatgtat 4503055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 547
Target Start/End: Complemental strand, 39536699 - 39536651
Alignment:
Q  499 ctgttgaaagaactgttttttatagagaaagagctgctggaatgtattc 547  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||||||    
T  39536699 ctgttgaaagaacagtcttttatagagaaagagcggctggaatgtattc 39536651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 39546026 - 39545968
Alignment:
Q  489 ccagtagtagctgttgaaagaactgttttttatagagaaagagctgctggaatgtattc 547  Q
    ||||| ||||||||||||||||| || |||||| |||||||||| || |||||||||||    
T  39546026 ccagtggtagctgttgaaagaacggtcttttatcgagaaagagcagccggaatgtattc 39545968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 547
Target Start/End: Complemental strand, 1083324 - 1083275
Alignment:
Q  498 gctgttgaaagaactgttttttatagagaaagagctgctggaatgtattc 547  Q
    |||||||||||||| || ||||||||||||||||| || |||||||||||    
T  1083324 gctgttgaaagaaccgtcttttatagagaaagagcagccggaatgtattc 1083275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 547
Target Start/End: Original strand, 39340177 - 39340226
Alignment:
Q  498 gctgttgaaagaactgttttttatagagaaagagctgctggaatgtattc 547  Q
    |||||||||||||| || ||||||||||||||||| || |||||||||||    
T  39340177 gctgttgaaagaacggtcttttatagagaaagagcggccggaatgtattc 39340226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 548
Target Start/End: Original strand, 39354999 - 39355047
Alignment:
Q  500 tgttgaaagaactgttttttatagagaaagagctgctggaatgtattct 548  Q
    |||||||||||| || ||||||||||||||||| || ||||||||||||    
T  39354999 tgttgaaagaacggtcttttatagagaaagagcagccggaatgtattct 39355047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 547
Target Start/End: Complemental strand, 39562841 - 39562774
Alignment:
Q  480 tcagtacaaccagtagtagctgttgaaagaactgttttttatagagaaagagctgctggaatgtattc 547  Q
    ||||| || ||||| || ||||| |||||||| || ||||||||||||||||| || |||||||||||    
T  39562841 tcagtgcagccagtggttgctgtcgaaagaacggtcttttatagagaaagagcagccggaatgtattc 39562774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 39563132 - 39563086
Alignment:
Q  132 caatgcttggcttgcttgtggaaacaacgttggtcatattggcgcaa 178  Q
    |||||| |||||||||| |||||||||| |||||| |||||||||||    
T  39563132 caatgcatggcttgcttatggaaacaacattggtcttattggcgcaa 39563086  T

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Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 575
Target Start/End: Complemental strand, 2147514 - 2147362
Alignment:
Q  423 aatgccatgggctcaatgtacactgctgttttcttcattggggtccaaaattcagcctcagtacaaccagtagtagctgttgaaagaactgttttttata 522  Q
    ||||| ||||| ||||||||  ||||||||  |||||| |||||   ||||   ||||| ||||||||| |||||||  |||| ||||| || || || |    
T  2147514 aatgcaatggggtcaatgtatgctgctgttaccttcataggggttgtaaatggtgcctcggtacaaccaatagtagcaattgagagaacagtcttctaca 2147415  T
Q  523 gagaaagagctgctggaatgtattctgccttaccctatgcacttgcacaggta 575  Q
    ||||||||||||| ||||||||||| ||  | || ||||| ||||||||||||    
T  2147414 gagaaagagctgcaggaatgtattcagctatgccatatgctcttgcacaggta 2147362  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 576
Target Start/End: Complemental strand, 2159331 - 2159232
Alignment:
Q  477 gcctcagtacaaccagtagtagctgttgaaagaactgttttttatagagaaagagctgctggaatgtattctgccttaccctatgcacttgcacaggtaa 576  Q
    |||||||| || || ||| |||| ||||| ||||| || || || |||||||||||||||||||||||||| || || || ||||||   ||||||||||    
T  2159331 gcctcagtgcagcctgtaatagcagttgagagaacagtcttctacagagaaagagctgctggaatgtattccgctttgccttatgcagcagcacaggtaa 2159232  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 429 - 575
Target Start/End: Original strand, 49774608 - 49774754
Alignment:
Q  429 atgggctcaatgtacactgctgttttcttcattggggtccaaaattcagcctcagtacaaccagtagtagctgttgaaagaactgttttttatagagaaa 528  Q
    ||||| || |||||| |||| ||  ||||||||||||| |||||| |  | || || |||||||| |||||  |||| ||||| ||||| ||||||||||    
T  49774608 atggggtccatgtacgctgcagtgctcttcattggggtacaaaatgctacatcggtgcaaccagttgtagccattgagagaacagttttctatagagaaa 49774707  T
Q  529 gagctgctggaatgtattctgccttaccctatgcacttgcacaggta 575  Q
      |||||||||||||| || || || || |||||| ||| |||||||    
T  49774708 aggctgctggaatgtactcagcattgccatatgcatttggacaggta 49774754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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