View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7029_low_7 (Length: 224)
Name: NF7029_low_7
Description: NF7029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7029_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 55958806 - 55959017
Alignment:
| Q |
1 |
caactctgacattgcccagtctattgttcctgccgaagcatcacttccggcacaaacatgtcctgttcaattccacatacattatgttnnnnnnngcttg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
55958806 |
caactctgacattgcccagtctattgttcctgctgaagtatcacttccggcacaaacatgtcctgttcaattccacatacattatgttaaaaaaagcttg |
55958905 |
T |
|
| Q |
101 |
tgatcataacaaaataaaccatatgtttgcattgaagaaaacaataatataccnnnnnnnnnttggcacgagataaattattattaaaatttttacattt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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|
| T |
55958906 |
tgatcataacaaaataaaccatatgtttgcattgaagaaaacaataatataccaaaaaaaaattggcacgagataaattattattaaaatttttacattt |
55959005 |
T |
|
| Q |
201 |
atcctacacagg |
212 |
Q |
| |
|
|||||||||||| |
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|
| T |
55959006 |
atcctacacagg |
55959017 |
T |
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