View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7032_high_7 (Length: 301)
Name: NF7032_high_7
Description: NF7032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7032_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 8 - 288
Target Start/End: Complemental strand, 2259290 - 2259010
Alignment:
| Q |
8 |
tagcagagagcacatacaatttcattgtgaatagtccagaggaaaaggaccttagtaacttcctcatcttcccatatatgatggtgaggatgctacatga |
107 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2259290 |
tagcaaagagcacatacaatttcattgtgaatagtccagaggaaaaggaccttagtaacttcctcatcttcccatatatgatggtgaggatgctacatga |
2259191 |
T |
|
| Q |
108 |
ccaagtttggatctctttatctcgccatcgaaccgccaaaggaaaaaacagaatcgtcgacaaggcaatcgagtttgaacaagttgatcgagaaagcaat |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2259190 |
ccaagtttggatctctttatctcgccatcgaaccgccaaaggaaaaaacagaatcgtcgacaaggcaatcgagtttgaacaagttgatcgagaaagcaat |
2259091 |
T |
|
| Q |
208 |
tggtacgaattacnnnnnnnaaaatgacaaatgtcacaacaccttttatttttgttacactcgacaccataattaatactt |
288 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
2259090 |
tggtacgaattactttttttaaaatgacaaatgtcacaacaccttttatttttgttacattcgacaccataattaatactt |
2259010 |
T |
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