View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7032_low_8 (Length: 282)
Name: NF7032_low_8
Description: NF7032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7032_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 20 - 271
Target Start/End: Original strand, 14829259 - 14829510
Alignment:
| Q |
20 |
ttaccctctgtatccatttaaggtctctacaacaccaaagtgaacttgcagtatatatcatgaacattagtcctttggaagagtattttgttggttaacc |
119 |
Q |
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| T |
14829259 |
ttaccctctgtatccatttaaggtctctacaacaccaaagtgaacttgcagtatatatcatgaacattagtcctttggaagagtattttgttggttaacc |
14829358 |
T |
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| Q |
120 |
atcgagaaagaaatatacattaagcaataataatgttttgtgatcaaataacaataactcaagtacttttgttttctatcaacatcttaattttctctgt |
219 |
Q |
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| T |
14829359 |
atcgagaaagaaatatacattaagcaataataatgttttgtgatcaaataacaataactcaagtatttttgttttctatcaacatcttaattttctctgt |
14829458 |
T |
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| Q |
220 |
ttatgtatagtannnnnnncatttaaatttctatataatctccattgatgtc |
271 |
Q |
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| T |
14829459 |
ttatgtatagtatttttttcatttaaatttctatataatctccattgatgtc |
14829510 |
T |
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