View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7033_high_10 (Length: 340)
Name: NF7033_high_10
Description: NF7033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7033_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 7 - 324
Target Start/End: Complemental strand, 37520365 - 37520048
Alignment:
| Q |
7 |
tcgaagaatatgttccaagacaaaaactgatgaattttccaacnnnnnnnggccatagaatcaaaggtaatacaactacagcaacattaagagatgatga |
106 |
Q |
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| T |
37520365 |
tcgaacaacatgttccaagacaaaaactgatgaattttccaacaaaaaaaggccatagaatcaaaggtaatacaactacagcaacattaagagatgatga |
37520266 |
T |
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| Q |
107 |
atatatagggaaatccaagttagagacaccgcttgataatgatgaaacattcaacaatttcattaaacgtgctacgtataaaatcagaaccgtcacaatg |
206 |
Q |
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| T |
37520265 |
atatatagggaaatccaagttagagacaccgcttgataacgatgaaacattcaacaatttcattaaacgtgctacgtataaaatcagaaccgtcacaatg |
37520166 |
T |
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| Q |
207 |
tccaagtccaacattgatagggagcagagtaacaacactgcacctgcagcaccagatcatgaagctaatggtaataacagttataaggaaaattaccaaa |
306 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37520165 |
tccaagtccaacattgatagggagcagaataacaacactgcacctgcagcaccagatcatgaagctaatggtaataacagttataaggaaaattaccaaa |
37520066 |
T |
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| Q |
307 |
gggaccagtttgatgatt |
324 |
Q |
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|||||||||||||||||| |
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| T |
37520065 |
gggaccagtttgatgatt |
37520048 |
T |
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