View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7033_low_26 (Length: 244)
Name: NF7033_low_26
Description: NF7033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7033_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 31114382 - 31114151
Alignment:
| Q |
1 |
tttgggtgggagaagttgttgagagtatctactgtcagcggccaccgtgtcagtggtgtttgtttgaacttgaggaagtggaagaagaatgatagagctt |
100 |
Q |
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| T |
31114382 |
tttgggtgggagaagttgttgagagtatctactgtcagcggccactgtgtcagtggcgtttgtttgaacttgaggaagtggaagaagaatgatagagctt |
31114283 |
T |
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| Q |
101 |
tgcgaagttcctcctacacgatatattttctctcaatttttgttgttttctatcagcgtcgtatgtattcaataatgcatgaaatttgtttaatgtaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31114282 |
tgcgaagttcctcctacacgatatattttctcccaatttttgttgttttctatcagcgtcgtatgtattcaataatgcatgaaatttgtttaatgtaaca |
31114183 |
T |
|
| Q |
201 |
caagcttacataaatcaaaatttggatgatgt |
232 |
Q |
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||||||||||| |||||||||||||||||||| |
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| T |
31114182 |
caagcttacattaatcaaaatttggatgatgt |
31114151 |
T |
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