View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7033_low_34 (Length: 217)
Name: NF7033_low_34
Description: NF7033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7033_low_34 |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 42342524 - 42342700
Alignment:
| Q |
23 |
tagatctccctccataatattttaccacttaatcaatcaatgactcaaagacaatgaatcaaccgaatccacacgacaactaaggtcaaattgctctcaa |
122 |
Q |
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| T |
42342524 |
tagatctccctccataatattttaccacttaatcaatcaatgactcaaagacaatgaatcaaccgaatccacacgacaactaaggtcaaattgctctcaa |
42342623 |
T |
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| Q |
123 |
gaaaatatcaaactaccaatttggtcacgtgtaccttccccttactggatctaacttataccacttggacccatctt |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
42342624 |
gaaaatatcaaactaccaatttggtcacgtgtaccttccccttactggatctaagttataccacttggacccatctt |
42342700 |
T |
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