View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7035_low_27 (Length: 233)

Name: NF7035_low_27
Description: NF7035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7035_low_27
NF7035_low_27
[»] chr2 (42 HSPs)
chr2 (4-112)||(2294825-2294933)
chr2 (113-216)||(36168915-36169018)
chr2 (113-216)||(40613820-40613923)
chr2 (113-216)||(2533202-2533305)
chr2 (117-216)||(13438422-13438521)
chr2 (113-216)||(20700894-20700997)
chr2 (117-211)||(17473104-17473198)
chr2 (125-216)||(9058559-9058650)
chr2 (117-216)||(10249304-10249403)
chr2 (117-216)||(28863534-28863633)
chr2 (113-216)||(38273061-38273163)
chr2 (113-216)||(42257272-42257375)
chr2 (117-211)||(28381577-28381671)
chr2 (117-216)||(19930742-19930841)
chr2 (117-210)||(7465657-7465750)
chr2 (117-216)||(32505570-32505669)
chr2 (114-210)||(44152012-44152108)
chr2 (117-216)||(40701557-40701656)
chr2 (117-207)||(4060773-4060863)
chr2 (113-209)||(17823874-17823970)
chr2 (117-209)||(30915549-30915641)
chr2 (124-216)||(33436029-33436121)
chr2 (113-216)||(3440058-3440161)
chr2 (117-211)||(38882733-38882827)
chr2 (115-205)||(41758677-41758767)
chr2 (49-112)||(2304667-2304730)
chr2 (113-216)||(13365432-13365535)
chr2 (117-178)||(5574422-5574483)
chr2 (113-216)||(3738022-3738125)
chr2 (115-210)||(21301420-21301515)
chr2 (113-216)||(43490200-43490303)
chr2 (1-43)||(2310704-2310746)
chr2 (116-216)||(2997408-2997508)
chr2 (113-209)||(26891422-26891518)
chr2 (113-216)||(38732433-38732536)
chr2 (113-216)||(45097653-45097756)
chr2 (113-216)||(3034901-3035004)
chr2 (129-178)||(27864808-27864857)
chr2 (169-212)||(33436294-33436337)
chr2 (152-210)||(17819961-17820019)
chr2 (166-215)||(41575218-41575267)
chr2 (113-161)||(1750414-1750462)
[»] chr3 (40 HSPs)
chr3 (113-216)||(51419278-51419381)
chr3 (113-216)||(47531944-47532047)
chr3 (110-216)||(11347837-11347943)
chr3 (113-209)||(20764833-20764929)
chr3 (117-216)||(31456768-31456867)
chr3 (117-216)||(33644279-33644378)
chr3 (113-216)||(41189682-41189785)
chr3 (117-216)||(53982090-53982189)
chr3 (113-210)||(26141448-26141547)
chr3 (117-210)||(49607499-49607592)
chr3 (113-216)||(8076472-8076575)
chr3 (117-209)||(52629386-52629478)
chr3 (117-216)||(54868817-54868916)
chr3 (112-214)||(35965699-35965801)
chr3 (117-214)||(9563080-9563177)
chr3 (113-210)||(30801651-30801748)
chr3 (117-205)||(36707350-36707438)
chr3 (113-216)||(26754774-26754877)
chr3 (113-210)||(35536711-35536808)
chr3 (115-216)||(48375626-48375727)
chr3 (113-204)||(33118768-33118860)
chr3 (117-210)||(17470490-17470583)
chr3 (112-216)||(36331246-36331350)
chr3 (115-210)||(43746424-43746519)
chr3 (113-210)||(14623757-14623854)
chr3 (117-181)||(48587023-48587087)
chr3 (115-210)||(13897975-13898070)
chr3 (113-216)||(24699873-24699975)
chr3 (118-205)||(39670101-39670188)
chr3 (113-216)||(45058471-45058574)
chr3 (113-210)||(8956847-8956944)
chr3 (117-178)||(11095289-11095350)
chr3 (115-210)||(1758379-1758471)
chr3 (113-209)||(21746106-21746202)
chr3 (113-201)||(42823205-42823293)
chr3 (117-181)||(27714825-27714889)
chr3 (113-209)||(35093671-35093767)
chr3 (106-151)||(11140954-11140999)
chr3 (113-141)||(45127000-45127028)
chr3 (113-161)||(54246200-54246248)
[»] chr5 (32 HSPs)
chr5 (112-216)||(15409527-15409631)
chr5 (129-216)||(36732876-36732963)
chr5 (117-211)||(2740358-2740452)
chr5 (117-211)||(33149560-33149654)
chr5 (117-211)||(14831898-14831992)
chr5 (113-211)||(26720600-26720698)
chr5 (113-211)||(26990349-26990447)
chr5 (117-216)||(18520806-18520905)
chr5 (117-216)||(40145486-40145585)
chr5 (114-216)||(6679777-6679879)
chr5 (122-216)||(13811731-13811825)
chr5 (113-211)||(31009072-31009170)
chr5 (117-211)||(35785283-35785377)
chr5 (115-210)||(35943812-35943907)
chr5 (113-216)||(2252086-2252189)
chr5 (113-216)||(3921183-3921286)
chr5 (114-210)||(33825243-33825339)
chr5 (113-207)||(6259919-6260013)
chr5 (116-211)||(36875537-36875628)
chr5 (113-210)||(2177449-2177546)
chr5 (156-216)||(28177854-28177914)
chr5 (113-216)||(21370083-21370186)
chr5 (117-181)||(31132448-31132512)
chr5 (113-216)||(20073434-20073537)
chr5 (113-216)||(39688815-39688918)
chr5 (135-209)||(39557457-39557531)
chr5 (113-210)||(16327986-16328083)
chr5 (113-174)||(33855082-33855143)
chr5 (168-216)||(42414275-42414323)
chr5 (115-209)||(9603899-9603993)
chr5 (113-161)||(18033982-18034030)
chr5 (113-141)||(38470579-38470607)
[»] chr1 (36 HSPs)
chr1 (113-216)||(32813326-32813429)
chr1 (117-216)||(27564657-27564756)
chr1 (115-211)||(49811447-49811543)
chr1 (117-211)||(37649282-37649376)
chr1 (129-216)||(38632255-38632342)
chr1 (117-216)||(41758884-41758983)
chr1 (117-216)||(48716204-48716303)
chr1 (113-211)||(51898601-51898699)
chr1 (117-211)||(47452242-47452336)
chr1 (124-216)||(50630537-50630629)
chr1 (117-216)||(2581994-2582093)
chr1 (117-216)||(9474798-9474897)
chr1 (113-216)||(45044478-45044581)
chr1 (117-209)||(3000405-3000497)
chr1 (113-209)||(37926356-37926452)
chr1 (117-209)||(38595240-38595332)
chr1 (117-216)||(8346309-8346409)
chr1 (117-211)||(43216-43310)
chr1 (117-214)||(26274513-26274607)
chr1 (113-209)||(3302451-3302547)
chr1 (113-181)||(26440838-26440906)
chr1 (113-209)||(41608411-41608507)
chr1 (113-210)||(44454064-44454165)
chr1 (113-216)||(5958918-5959021)
chr1 (113-216)||(11152296-11152399)
chr1 (113-216)||(50590918-50591021)
chr1 (113-211)||(47748526-47748624)
chr1 (115-212)||(23597011-23597108)
chr1 (113-216)||(6260949-6261052)
chr1 (166-216)||(44548347-44548397)
chr1 (146-210)||(13414846-13414910)
chr1 (113-216)||(44332289-44332392)
chr1 (115-207)||(34339968-34340059)
chr1 (113-170)||(35003294-35003351)
chr1 (112-141)||(37814777-37814806)
chr1 (155-211)||(48489384-48489440)
[»] chr8 (34 HSPs)
chr8 (113-211)||(43414499-43414597)
chr8 (113-216)||(4854781-4854884)
chr8 (117-216)||(14548001-14548100)
chr8 (117-216)||(12831126-12831225)
chr8 (117-216)||(23122519-23122618)
chr8 (117-211)||(34012218-34012312)
chr8 (113-211)||(37038563-37038661)
chr8 (114-211)||(5957914-5958011)
chr8 (129-202)||(42710228-42710301)
chr8 (113-216)||(15048099-15048203)
chr8 (116-216)||(40423864-40423964)
chr8 (117-216)||(504043-504142)
chr8 (117-211)||(9122269-9122363)
chr8 (113-216)||(8841350-8841453)
chr8 (133-211)||(1179878-1179956)
chr8 (117-216)||(15197412-15197511)
chr8 (110-216)||(10284546-10284652)
chr8 (113-216)||(15258847-15258950)
chr8 (114-209)||(25838275-25838370)
chr8 (113-207)||(42354506-42354600)
chr8 (135-209)||(44507027-44507101)
chr8 (113-209)||(42221601-42221697)
chr8 (117-216)||(34307295-34307394)
chr8 (113-211)||(40467784-40467882)
chr8 (116-216)||(16056322-16056422)
chr8 (117-216)||(24307715-24307814)
chr8 (113-204)||(32707921-32708012)
chr8 (113-214)||(32032805-32032906)
chr8 (155-211)||(10621047-10621103)
chr8 (117-211)||(30479396-30479490)
chr8 (169-216)||(20074916-20074963)
chr8 (113-207)||(30183794-30183887)
chr8 (151-216)||(16383456-16383521)
chr8 (115-203)||(17443917-17444005)
[»] chr7 (42 HSPs)
chr7 (113-211)||(35522960-35523058)
chr7 (117-216)||(19329921-19330020)
chr7 (113-211)||(31735961-31736059)
chr7 (117-216)||(8080305-8080404)
chr7 (117-216)||(38837296-38837395)
chr7 (113-211)||(46033719-46033817)
chr7 (117-216)||(32951415-32951514)
chr7 (117-216)||(4999436-4999535)
chr7 (117-216)||(7389468-7389566)
chr7 (113-216)||(21234480-21234583)
chr7 (114-210)||(16374743-16374839)
chr7 (117-209)||(40957793-40957885)
chr7 (113-209)||(41423768-41423864)
chr7 (113-216)||(26296723-26296826)
chr7 (133-211)||(3784079-3784157)
chr7 (122-207)||(19436114-19436199)
chr7 (113-178)||(46374742-46374807)
chr7 (142-211)||(3694451-3694520)
chr7 (143-216)||(35137612-35137685)
chr7 (135-216)||(38267119-38267200)
chr7 (115-216)||(41915820-41915921)
chr7 (113-207)||(27744227-27744321)
chr7 (117-181)||(3434666-3434730)
chr7 (113-216)||(8238292-8238395)
chr7 (117-216)||(11044257-11044356)
chr7 (115-210)||(18207264-18207359)
chr7 (113-216)||(22343440-22343543)
chr7 (113-216)||(35468773-35468876)
chr7 (113-216)||(38044276-38044379)
chr7 (115-216)||(7727985-7728086)
chr7 (116-209)||(1766702-1766795)
chr7 (113-214)||(12310985-12311086)
chr7 (115-210)||(39255844-39255939)
chr7 (117-178)||(36362131-36362192)
chr7 (114-207)||(2318160-2318255)
chr7 (169-216)||(36208252-36208299)
chr7 (143-216)||(32564374-32564447)
chr7 (117-178)||(36361847-36361908)
chr7 (113-216)||(40846031-40846134)
chr7 (163-205)||(10343531-10343573)
chr7 (115-209)||(45223128-45223222)
chr7 (114-206)||(32045926-32046018)
[»] chr6 (23 HSPs)
chr6 (113-216)||(31976327-31976430)
chr6 (113-216)||(31110679-31110782)
chr6 (117-216)||(32869757-32869856)
chr6 (117-211)||(11427702-11427796)
chr6 (117-216)||(17598633-17598732)
chr6 (117-216)||(22880580-22880679)
chr6 (117-207)||(29857915-29858005)
chr6 (113-216)||(15989960-15990063)
chr6 (135-210)||(23128067-23128142)
chr6 (113-216)||(30341278-30341381)
chr6 (129-214)||(15832658-15832743)
chr6 (113-216)||(4231627-4231730)
chr6 (117-216)||(6209388-6209486)
chr6 (113-216)||(15507942-15508045)
chr6 (113-210)||(31952948-31953045)
chr6 (115-210)||(28536408-28536503)
chr6 (115-216)||(30870093-30870193)
chr6 (146-216)||(31109351-31109421)
chr6 (151-206)||(946465-946520)
chr6 (113-159)||(22421997-22422043)
chr6 (113-164)||(26466799-26466850)
chr6 (113-141)||(3213400-3213428)
chr6 (113-141)||(21293749-21293777)
[»] chr4 (38 HSPs)
chr4 (117-216)||(41236426-41236525)
chr4 (113-216)||(31910271-31910374)
chr4 (113-210)||(29239971-29240068)
chr4 (117-216)||(42044289-42044388)
chr4 (117-216)||(48182971-48183070)
chr4 (117-211)||(6034128-6034222)
chr4 (115-209)||(40574865-40574959)
chr4 (117-216)||(24995029-24995128)
chr4 (113-216)||(41823961-41824064)
chr4 (113-216)||(50052346-50052449)
chr4 (117-216)||(54473455-54473554)
chr4 (113-211)||(50526089-50526187)
chr4 (130-209)||(480382-480461)
chr4 (117-210)||(23608320-23608413)
chr4 (135-216)||(11511402-11511483)
chr4 (113-216)||(19670634-19670737)
chr4 (113-216)||(55475270-55475373)
chr4 (155-216)||(29234205-29234266)
chr4 (116-214)||(56300086-56300184)
chr4 (115-210)||(29977970-29978065)
chr4 (113-216)||(50813810-50813913)
chr4 (113-211)||(18924413-18924511)
chr4 (113-203)||(29547877-29547967)
chr4 (117-216)||(53352496-53352587)
chr4 (116-216)||(17983664-17983764)
chr4 (115-210)||(43487793-43487883)
chr4 (113-216)||(47986287-47986389)
chr4 (113-210)||(28480186-28480283)
chr4 (113-210)||(28481061-28481158)
chr4 (113-210)||(28481936-28482033)
chr4 (113-210)||(29589658-29589755)
chr4 (113-216)||(32767037-32767140)
chr4 (114-211)||(48647645-48647742)
chr4 (113-164)||(1771315-1771366)
chr4 (113-152)||(3481787-3481826)
chr4 (113-203)||(44536664-44536754)
chr4 (116-210)||(47104629-47104723)
chr4 (113-141)||(55966418-55966446)
[»] scaffold1268 (1 HSPs)
scaffold1268 (114-211)||(848-945)
[»] scaffold1267 (1 HSPs)
scaffold1267 (114-211)||(848-945)
[»] scaffold0237 (1 HSPs)
scaffold0237 (117-207)||(4117-4207)
[»] scaffold0321 (1 HSPs)
scaffold0321 (117-209)||(10031-10123)
[»] scaffold0110 (1 HSPs)
scaffold0110 (113-210)||(8781-8878)
[»] scaffold0316 (1 HSPs)
scaffold0316 (113-199)||(17199-17285)
[»] scaffold0018 (1 HSPs)
scaffold0018 (114-203)||(152590-152679)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 2294933 - 2294825
Alignment:
Q  4 tctttaggatacttgttgtaagtattaaaaaattagaaattagtatttgtatgaattcaatttaacctatcaaatgaaaggtgaaactgttcaagttccc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2294933 tctttaggatacttgttgtaagtattaaaaaattagaaattagtatttgtatgaactcaatttaacctatcaaatgaaaggtgaaactgttcaagttccc 2294834  T
Q  104 aatgtgttg 112  Q
    |||||||||    
T  2294833 aatgtgttg 2294825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 36169018 - 36168915
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcg 36168919  T
Q  213 gggt 216  Q
    ||||    
T  36168918 gggt 36168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 40613820 - 40613923
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||     
T  40613820 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgcg 40613919  T
Q  213 gggt 216  Q
    ||||    
T  40613920 gggt 40613923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 2533305 - 2533202
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| |||||||||||||||     
T  2533305 ggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgcg 2533206  T
Q  213 gggt 216  Q
    ||||    
T  2533205 gggt 2533202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 13438521 - 13438422
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 20700997 - 20700894
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||| |||     
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcg 20700898  T
Q  213 gggt 216  Q
    ||||    
T  20700897 gggt 20700894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 17473198 - 17473104
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 17473104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 9058650 - 9058559
Alignment:
Q  125 ataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  9058650 ataaataccctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 9058559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 10249304 - 10249403
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 28863633 - 28863534
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 38273061 - 38273163
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||| ||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  38273061 ggaaaatattacataaacaccatttattctcatacatc-ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcg 38273159  T
Q  213 gggt 216  Q
    ||||    
T  38273160 gggt 38273163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 42257375 - 42257272
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||| ||||||| |||||||||||| | |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  42257375 ggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcg 42257276  T
Q  213 gggt 216  Q
    ||||    
T  42257275 gggt 42257272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 28381577 - 28381671
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgc 28381671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 19930742 - 19930841
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 7465657 - 7465750
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| | |||| |||||||||||||||||||||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtg 7465750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 32505570 - 32505669
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||| |||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||| ||||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggt 32505669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 44152108 - 44152012
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    |||||||||||||||||||| ||||||| |||||||||||||| | | ||| |||||||||||||||| ||||||  ||||||||||||||||||||    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtg 44152012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 40701656 - 40701557
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||||| |||||| ||||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 4060863 - 4060773
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    |||| |||||||||| | |||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||||||||||    
T  4060863 aatgatacataaacatcttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgctt 4060773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 17823970 - 17823874
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||||||| ||| ||||||||  ||||||||||||||||||||||| ||| ||||||||||| | ||||  |||||||||||||||||||    
T  17823970 ggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 17823874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 30915641 - 30915549
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||  ||||||||||||||| | |||||||||||||||||||||||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgt 30915549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 33436029 - 33436121
Alignment:
Q  124 cataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| ||||| ||||||| |||||||||||||||||| ||| |||||||||||||||| | ||||| ||||||||||||||||||||| ||||    
T  33436029 catagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggt 33436121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 3440161 - 3440058
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||| |||   ||| ||||||||| ||||||| ||||||||| |||||||||||     
T  3440161 ggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcg 3440062  T
Q  213 gggt 216  Q
    ||||    
T  3440061 gggt 3440058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 38882733 - 38882827
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||| || |  ||||||||||||||||| ||||||||    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgcattaggaagagataagataagagaaaagagaaagtgcgcttgtgc 38882827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 41758767 - 41758677
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgc 205  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||    
T  41758767 aaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtgc 41758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 2304730 - 2304667
Alignment:
Q  49 tttgtatgaattcaatttaacctatcaaatgaaaggtgaaactgttcaagttcccaatgtgttg 112  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2304730 tttgtacgaactcaatttaacctatcaaatgaaaggtgaaattgttcaagttcccaatgtgttg 2304667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 13365535 - 13365432
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||| ||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  13365535 ggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 13365436  T
Q  213 gggt 216  Q
    ||||    
T  13365435 gggt 13365432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 5574422 - 5574483
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagaga 178  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  5574422 aatgatacatagacaccctttattcccatacacccttgtacacgccatgcattaggaagaga 5574483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 3738125 - 3738022
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||||| ||||  |||||||| |||||||||| |||   |||||||| |||| ||||||| ||| ||||| |||||||||||     
T  3738125 ggaaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcg 3738026  T
Q  213 gggt 216  Q
    ||||    
T  3738025 gggt 3738022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 21301420 - 21301515
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||| ||| |||||||||||| |||||||| | |||||||| ||| || |||||||| |||| || ||| ||||||||||||||| |||||    
T  21301420 aaaatgttagatacacaccctttatttccatacactcatgtacacctcatgcactaggaagaaagaagagaagataaaagagaaagtgtgtttgtg 21301515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 43490303 - 43490200
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||| ||  ||||||||||||||| || |||  ||||| ||||||| |||||||     
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcg 43490204  T
Q  213 gggt 216  Q
    ||||    
T  43490203 gggt 43490200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2310746 - 2310704
Alignment:
Q  1 gtgtctttaggatacttgttgtaagtattaaaaaattagaaat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2310746 gtgtctttaggatacttgttgtaagtattaaaaaattagaaat 2310704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 2997408 - 2997508
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||||||||||| ||||  |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  2997408 aaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 2997507  T
Q  216 t 216  Q
    |    
T  2997508 t 2997508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 26891422 - 26891518
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||||||| |||||||| |||  |||||||  || |||||||  || ||||||||||||||| || |||| ||||||||| |||||||||    
T  26891422 ggaaaatgttacatatacacccttaattttcatacacatttttacaccctgtatattaggaagagagaagagaagaggaaagagaaaatgtgcttgt 26891518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 38732536 - 38732433
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||| ||||||||| | |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  38732536 ggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 38732437  T
Q  213 gggt 216  Q
    ||||    
T  38732436 gggt 38732433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 45097653 - 45097756
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||| | |||| |  ||||||| |||||||| || ||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  45097653 ggaaaatgttacataaacatcttttaattgcatacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 45097752  T
Q  213 gggt 216  Q
    ||||    
T  45097753 gggt 45097756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 3034901 - 3035004
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||| | ||||||| |||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  3034901 ggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 3035000  T
Q  213 gggt 216  Q
    ||||    
T  3035001 gggt 3035004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 27864857 - 27864808
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagaga 178  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||    
T  27864857 acaccctttattctcatacacccttgtacatcccatgtattaggaagaga 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 33436337 - 33436294
Alignment:
Q  169 taggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||| |||| || ||||||||||||||||||||||    
T  33436337 taggaagagagaagaggataggaaagagaaagtgtgcttgtgca 33436294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 17819961 - 17820019
Alignment:
Q  152 ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||| ||| |||||||||||||||| ||||||  ||||||||| |||| |||||    
T  17819961 ttgtacacctcatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtg 17820019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 41575267 - 41575218
Alignment:
Q  166 cattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||||||| ||||||| ||||||  |||||||||||||||||||| ||||    
T  41575267 cattaggacgagagaagaggagatgaaagagaaagtgtgcttgtgtaggg 41575218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 1750414 - 1750462
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccc 161  Q
    |||||||||||||| ||||||||||||||| | || || ||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccc 1750462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 51419278 - 51419381
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  51419278 ggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcg 51419377  T
Q  213 gggt 216  Q
    ||||    
T  51419378 gggt 51419381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 47532047 - 47531944
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  47532047 ggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcg 47531948  T
Q  213 gggt 216  Q
    ||||    
T  47531947 gggt 47531944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 11347837 - 11347943
Alignment:
Q  110 ttgggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  11347837 ttgggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttat 11347936  T
Q  210 gcagggt 216  Q
    |||||||    
T  11347937 gcagggt 11347943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 20764833 - 20764929
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  20764833 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgt 20764929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 31456867 - 31456768
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 31456768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 33644378 - 33644279
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 41189682 - 41189785
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  41189682 ggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcg 41189781  T
Q  213 gggt 216  Q
    ||||    
T  41189782 gggt 41189785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 53982189 - 53982090
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 26141448 - 26141547
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagag--agaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||    
T  26141448 ggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgcttgtg 26141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 49607592 - 49607499
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    |||| |||||| |||||||||||||||||||||||||||||||  ||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtg 49607499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 8076575 - 8076472
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||||  ||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||     
T  8076575 ggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcg 8076476  T
Q  213 gggt 216  Q
    ||||    
T  8076475 gggt 8076472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 52629478 - 52629386
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||| |||||| |||||| ||||| ||||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  52629478 aatgatacatagacacccattatttccatacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgt 52629386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 54868817 - 54868916
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||||| |||||| ||||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 35965699 - 35965801
Alignment:
Q  112 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||||| |||  |||| ||| ||| || ||||||| |||||||||||||||||||||    
T  35965699 gggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgc 35965798  T
Q  212 agg 214  Q
    |||    
T  35965799 agg 35965801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 9563177 - 9563080
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    |||| |||||| | |||||||||||||||||||| ||||||| | ||| |||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcagg 9563080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 30801651 - 30801748
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||  | ||||||||||||| | ||||| ||||||||| ||||||||||    
T  30801651 ggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgtg 30801748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 36707350 - 36707438
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgc 205  Q
    |||| |||||| ||||| ||||||||||||||  |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgc 36707438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 26754877 - 26754774
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||||| |||   ||||||||||||| ||||||| ||||||||| |||||||||||     
T  26754877 ggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcg 26754778  T
Q  213 gggt 216  Q
    ||||    
T  26754777 gggt 26754774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 35536808 - 35536711
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||| || ||||||||||||| || |||  |||||| |||||||||||||    
T  35536808 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtg 35536711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 48375626 - 48375727
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| |||||||||||| ||||||| | |||||||||| |||   ||||||||||||| ||||||| ||||||||| ||||||||||| ||    
T  48375626 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 48375725  T
Q  215 gt 216  Q
    ||    
T  48375726 gt 48375727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 33118768 - 33118860
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaa-taggagagaaaagagaaagtgtg 204  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||||| || |||| ||||||||  ||||||| ||||||||||||||    
T  33118768 ggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtgtg 33118860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 17470583 - 17470490
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    |||| |||||| ||||| ||||||| ||||||   ||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||||    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtg 17470490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 36331246 - 36331350
Alignment:
Q  112 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||| ||| | |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||    
T  36331246 gggaaaatgttacatatacatcttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 36331345  T
Q  212 agggt 216  Q
     ||||    
T  36331346 ggggt 36331350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 43746519 - 43746424
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||| ||| || |||||||| |||| ||||||  ||||||||| |||| |||||    
T  43746519 aaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaattgtgtttgtg 43746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 14623757 - 14623854
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||||| ||| || ||| ||||||||| || |||  ||||||||||||||||||||    
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtg 14623854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 48587023 - 48587087
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaa 181  Q
    |||| |||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  48587023 aatgatacatagacaccctttattcccatatacccttgtacatcccatgcattaggaagagagaa 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 13897975 - 13898070
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||| ||| ||||| ||||||| |||||||  || ||||||||||||| |||| |||||||| || |||  ||||||||||||||||||||    
T  13897975 aaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgtg 13898070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 24699873 - 24699975
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||| | ||||||| |||||| | || |||||| |||| | ||||||||||||| ||||||| |||||||||||||| |||| ||    
T  24699873 ggaaaatgttacatagacatcttttattctcatacatc-ttatacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgtttgtaca 24699971  T
Q  213 gggt 216  Q
    ||||    
T  24699972 gggt 24699975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 39670188 - 39670101
Alignment:
Q  118 atgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgc 205  Q
    |||||||| | ||| | |||||| || |||||||||||||| | ||||||||| |||||||||| |||||||||||||| ||||||||    
T  39670188 atgttacacagacatcatttatttccgtacacccttgtacatctcatacattaagaagagagaagaggagagaaaagaggaagtgtgc 39670101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 45058471 - 45058574
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||| |||||||||||||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  45058471 ggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 45058570  T
Q  213 gggt 216  Q
    ||||    
T  45058571 gggt 45058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 8956944 - 8956847
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| ||| | ||||||| ||||||||||| |||||||  | || ||||||||||||| || |||  |||||| |||||||||||||    
T  8956944 ggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtg 8956847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 11095289 - 11095350
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagaga 178  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  11095289 aatgatacatagacaccctttattctcatacacccttgtacacccgatgcattaggaagaga 11095350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 1758379 - 1758471
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||||||  |||||||  ||||||| |||||||||| || |||||||||||||||| ||||||  ||||||||| |||| |||||    
T  1758379 aaaatgttacataaacactgtttattc--atacacctttgtacaccc-atgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtg 1758471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 21746106 - 21746202
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||| ||||||  ||| | ||||||  |||||||||||||||||| |||| ||| ||||||||||| | ||||  |||||||||||||||||||    
T  21746106 ggaaaatattacatggacatcatttatttacatacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 21746202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 42823293 - 42823205
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagt 201  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || | |  |||||||||||    
T  42823293 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagt 42823205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 27714825 - 27714889
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaa 181  Q
    |||| |||||| |||| |||||||| | ||||||||||||||||||||  ||| |||||||||||    
T  27714825 aatgatacatatacactctttattctcgtacacccttgtacaccccatgtattgggaagagagaa 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 35093767 - 35093671
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||||||||||| || ||| | ||||||| |||||||| ||||||| | ||| || ||||||||||||| |  |||   ||||||||||||||||||    
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgt 35093671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 11140954 - 11140999
Alignment:
Q  106 tgtgttgggaaaatgttacataaacaccctttattcccatacaccc 151  Q
    |||||| ||||||||||||||| |||||||||| || |||||||||    
T  11140954 tgtgtttggaaaatgttacatagacaccctttagtctcatacaccc 11140999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 45127028 - 45127000
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  45127028 ggaaaatgttacataaacaccctttattc 45127000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 54246248 - 54246200
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccc 161  Q
    |||||||||||||| ||||||||||||||| | || || ||||||||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccc 54246200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 15409527 - 15409631
Alignment:
Q  112 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  15409527 gggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgc 15409626  T
Q  212 agggt 216  Q
     ||||    
T  15409627 ggggt 15409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 36732876 - 36732963
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  36732876 acaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 36732963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 2740452 - 2740358
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgc 2740358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 33149560 - 33149654
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 33149654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 14831992 - 14831898
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||||||    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgc 14831898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 26720698 - 26720600
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||| ||| ||| | ||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  26720698 ggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtgc 26720600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 26990447 - 26990349
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||| ||| ||| | ||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  26990447 ggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtgc 26990349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 18520806 - 18520905
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||  |||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 40145585 - 40145486
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||| ||||||||||||| | | |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 40145486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 6679879 - 6679777
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||| ||| | ||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||| |    
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgg 6679780  T
Q  214 ggt 216  Q
    |||    
T  6679779 ggt 6679777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 13811825 - 13811731
Alignment:
Q  122 tacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||| ||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||    
T  13811825 tacatagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggt 13811731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 31009170 - 31009072
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||| || ||||||||||||| || |||| ||| |||||||||||||||||    
T  31009170 ggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgc 31009072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 35785377 - 35785283
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||| ||||||    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgc 35785283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 35943812 - 35943907
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||||||| || |||||||||| || ||||||| ||||||||||||||||||||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtg 35943907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 2252086 - 2252189
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  2252086 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 2252185  T
Q  213 gggt 216  Q
    ||||    
T  2252186 gggt 2252189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 3921183 - 3921286
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  3921183 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 3921282  T
Q  213 gggt 216  Q
    ||||    
T  3921283 gggt 3921286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 33825243 - 33825339
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    |||||||||||||  ||||| ||||||| |||||| |||| |||||||||| || ||||||||||||| || ||| |||||||||||||||||||||    
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtg 33825339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 6259919 - 6260013
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    ||||||||||||||| | | |||||||||| |||||| |||||||| ||||||||||||  |||||||| ||||||  |||||||||||||||||    
T  6259919 ggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtgctt 6260013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 36875537 - 36875628
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||| ||||| |||||| |||    ||||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||||||||    
T  36875537 aaatgttacatagacaccatttatttcca----cccttgtacaccccatgtattaggaagagagaagaggagaaaaaagagaaagtgtgcttgtgc 36875628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 2177546 - 2177449
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||| | ||||  ||||||| |||||||||||||||| || || || ||||||||||||| ||||||| ||||||||| ||||||||||    
T  2177546 ggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 2177449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 28177914 - 28177854
Alignment:
Q  156 acaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| ||||    
T  28177914 acaccccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggt 28177854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 21370186 - 21370083
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||| |  ||| | |||||||| |||| | ||||| ||||||||| |||| ||||||     
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcg 21370087  T
Q  213 gggt 216  Q
    ||||    
T  21370086 gggt 21370083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 31132512 - 31132448
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaa 181  Q
    |||| |||||||||||||||||||  |||||||||||||||||| ||| |||||| |||||||||    
T  31132512 aatgatacataaacaccctttattttcatacacccttgtacacctcatgcattagaaagagagaa 31132448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 20073434 - 20073537
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| |||   ||||||| |||||||| ||||| | | |||  | ||||||||||||| ||||||| ||| ||||||||||||||||||    
T  20073434 ggaaaatgttagatagacattttttattctcatacacctttgtaaatctcatgaactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgca 20073533  T
Q  213 gggt 216  Q
    ||||    
T  20073534 gggt 20073537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 39688815 - 39688918
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||| |||||||||| ||  ||||||||||||||| |  |||  ||||||||||||| ||| |||     
T  39688815 ggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgcg 39688914  T
Q  213 gggt 216  Q
    ||||    
T  39688915 gggt 39688918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 39557457 - 39557531
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||| |||| | || |||||||| |||  ||||||||||||||| |||||| ||||||||||||||| ||||    
T  39557457 tttattctcatagatccatgtacacctcatgtattaggaagagagaagaggagataaaagagaaagtgtgattgt 39557531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 16328083 - 16327986
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||| ||||||||| ||||||  |||| ||  || ||||||||||| |||||| |||||||| || | |  ||||| ||||||||||||||    
T  16328083 ggaaaatgttagataaacaccatttattttcatatacttttctacaccccatatattagggagagagaagagaaaatgaaagaaaaagtgtgcttgtg 16327986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 33855143 - 33855082
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaa 174  Q
    |||||||||||||| ||||||||||||||| | || || |||||||||||||  ||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaa 33855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 42414275 - 42414323
Alignment:
Q  168 ttaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  42414275 ttaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 42414323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 9603993 - 9603899
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||||||||| || ||||| ||||||| |||||||| ||||||| ||||  || || |||||||||| | || |  |||||||||||||| ||||    
T  9603993 aaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcactaagaagagagaagacgaaatgaaagagaaagtgtgattgt 9603899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 18033982 - 18034030
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccc 161  Q
    |||||||||||||| ||||||||||||||| | || || ||||||||||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccc 18034030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 38470579 - 38470607
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  38470579 ggaaaatgttacataaacaccctttattc 38470607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 32813429 - 32813326
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 32813330  T
Q  213 gggt 216  Q
    ||||    
T  32813329 gggt 32813326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 27564657 - 27564756
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 49811447 - 49811543
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 49811543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 37649376 - 37649282
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgc 37649282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 38632255 - 38632342
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  38632255 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggt 38632342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 41758983 - 41758884
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 48716204 - 48716303
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 51898601 - 51898699
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||||||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgc 51898699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 47452242 - 47452336
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| |||| ||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 47452336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 50630629 - 50630537
Alignment:
Q  124 cataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| ||||| ||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 50630537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 2582093 - 2581994
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| |||  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  2582093 aatgatacataaacaccctttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggt 2581994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 9474798 - 9474897
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||| |||||||| |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 9474897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 45044478 - 45044581
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    |||||||||||| || ||| | ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||     
T  45044478 ggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaaatgtgtttgtgcg 45044577  T
Q  213 gggt 216  Q
    ||||    
T  45044578 gggt 45044581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 3000497 - 3000405
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgt 3000405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 37926356 - 37926452
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||| ||| ||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtacttgt 37926452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 38595332 - 38595240
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  38595332 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgt 38595240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 8346309 - 8346409
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagag-agaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||| |||||||| ||| ||||||| |||||||| |||||||| |||| |||||||||||| | || |||||||||||||||||||||||||||||||||    
T  8346309 aatgatacataaataccatttattctcatacacctttgtacactccatgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtgcaggg 8346408  T
Q  216 t 216  Q
    |    
T  8346409 t 8346409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 43310 - 43216
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| | |||||||||||  |||||| |||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||    
T  43310 aatgatacatagataccctttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgc 43216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 26274607 - 26274513
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    |||| |||||| ||||||||||||||||||||||||||| || | ||| ||||||||||||||||   ||||||||||| ||||||| ||||||||||    
T  26274607 aatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaa---gagagaaaagaaaaagtgtacttgtgcagg 26274513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 3302451 - 3302547
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||| ||| ||||||||||| | ||||  ||| |||||||||||||||    
T  3302451 ggaaaatgttatataaacatcctttattaacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgt 3302547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 26440906 - 26440838
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaa 181  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||| ||||||||||    
T  26440906 ggaaaatgttacataaacatcctttattcctatacacccttgtacattccatacattacgaagagagaa 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 41608411 - 41608507
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||| ||  ||||||||||||||| || |||  ||||||||||||| |||||    
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 41608507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 44454165 - 44454064
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtac----accccatacattaggaagagagaataggagagaaaagagaaagtgtgcttg 208  Q
    ||||||||||||||||||||| |||||||  |||||||||| |||    ||||||| |||||||||||||||| | ||||| ||||| ||||||||||||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttg 44454066  T
Q  209 tg 210  Q
    ||    
T  44454065 tg 44454064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 5958918 - 5959021
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||  |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  5958918 ggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 5959017  T
Q  213 gggt 216  Q
    ||||    
T  5959018 gggt 5959021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 11152296 - 11152399
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| ||||| ||||||| |||||| |||| |||||||||| || | ||||||||||| ||||||| ||| |||||| ||||||||||     
T  11152296 ggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgtgcg 11152395  T
Q  213 gggt 216  Q
    ||||    
T  11152396 gggt 11152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 50590918 - 50591021
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| | ||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50591017  T
Q  213 gggt 216  Q
    ||||    
T  50591018 gggt 50591021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 47748624 - 47748526
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||||||| ||||| |||| |  ||||||| ||||||||||||||  ||||||||||||||| || |||  ||||||||||| | |||||||    
T  47748624 ggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgc 47748526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 23597011 - 23597108
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||| |||   ||||||| |||||| ||||| ||||| |||  | |||||| |||||||||||||||||||| |||||||| |||||||    
T  23597011 aaaatgttacatagacattttttattctcatacatccttggacacctcatgaactaggaatagagaataggagagaaaagataaagtgtgtttgtgca 23597108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 6261052 - 6260949
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||  |||||||| |||||||||| ||| | ||| ||||||||| ||||||  ||| ||||| ||||||| |||     
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcg 6260953  T
Q  213 gggt 216  Q
    ||||    
T  6260952 gggt 6260949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 44548347 - 44548397
Alignment:
Q  166 cattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  44548347 cattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggt 44548397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 13414910 - 13414846
Alignment:
Q  146 acacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||| |||||| |||| |||||||||||||||| | || |||||||||||| ||||||||||    
T  13414910 acaccctagtacactccatgcattaggaagagagaagatgatagaaaagagaaaatgtgcttgtg 13414846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 44332289 - 44332392
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| | ||| |||| |  ||||||||||||||||| | ||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  44332289 ggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 44332388  T
Q  213 gggt 216  Q
    ||||    
T  44332389 gggt 44332392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 34339968 - 34340059
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    ||||||||||||| ||||| ||||||  || |||| ||||||||||| || || | ||||||||||| || |||||||| ||||| |||||||    
T  34339968 aaaatgttacatagacaccttttattttca-acactcttgtacaccctatgcacttggaagagagaagagaagagaaaaaagaaactgtgctt 34340059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 35003294 - 35003351
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacaccc--ttgtacaccccatacatta 170  Q
    |||||||||||||| ||||||||||| |  |||||||||  |||||||||||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaat--catacaccctattgtacaccccatacatta 35003351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 37814777 - 37814806
Alignment:
Q  112 gggaaaatgttacataaacaccctttattc 141  Q
    ||||||||||||||||||||||||||||||    
T  37814777 gggaaaatgttacataaacaccctttattc 37814806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 48489440 - 48489384
Alignment:
Q  155 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||| ||| | ||||||||||||| ||| ||||||| ||||| |||||||||||    
T  48489440 tacaccctatatactaggaagagagaagaggtgagaaaatagaaaatgtgcttgtgc 48489384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 43414499 - 43414597
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43414499 ggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 43414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 4854781 - 4854884
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||| |||||||| |||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgca 4854880  T
Q  213 gggt 216  Q
    ||||    
T  4854881 gggt 4854884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 14548100 - 14548001
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 12831225 - 12831126
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 12831126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 23122519 - 23122618
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 34012218 - 34012312
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 34012312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 37038661 - 37038563
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||||||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgc 37038563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 5958011 - 5957914
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||| ||||||| |||||||||||||| ||||||    
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgc 5957914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 42710228 - 42710301
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42710228 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtg 42710301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 15048099 - 15048203
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggaga-gaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15048099 ggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtgc 15048198  T
Q  212 agggt 216  Q
     ||||    
T  15048199 ggggt 15048203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 40423864 - 40423964
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  216 t 216  Q
    |    
T  40423964 t 40423964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 504043 - 504142
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||| ||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 9122363 - 9122269
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| |||  |||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 9122269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 8841350 - 8841453
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| ||||||| |||||||||||||| || |||||| |||||| ||||||| |||||||||||||||||||||     
T  8841350 ggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcg 8841449  T
Q  213 gggt 216  Q
    ||||    
T  8841450 gggt 8841453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 1179878 - 1179956
Alignment:
Q  133 cctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  1179878 cctttattcccatatatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 1179956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 15197511 - 15197412
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||  |||||||||||||||||||||||||| ||| |||| |||||||| || ||||||||||||||||||||||||||||| ||||    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 15197412  T

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Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 10284546 - 10284652
Alignment:
Q  110 ttgggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||||||||||||||||| ||||| |||||||  ||||| ||||||||||||||| || ||||||||||||| | || || |||||||||||||||||||    
T  10284546 ttgggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgt 10284645  T
Q  210 gcagggt 216  Q
    || ||||    
T  10284646 gcggggt 10284652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 15258847 - 15258950
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| ||||||||  ||||||| || |||   ||||||||||||| ||||||| ||||||||| ||||||||||||    
T  15258847 ggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgca 15258946  T
Q  213 gggt 216  Q
    ||||    
T  15258947 gggt 15258950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 25838370 - 25838275
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||||||||||||| | | |||||||| ||||||| |||||||||||| ||||||||| || |||||| ||||||||||||| |||||||||||||    
T  25838370 gaaaatgttacatagatatcctttattgccatacaaccttgtacaccctatacattagcaaaagagaagaggagagaaaagaaaaagtgtgcttgt 25838275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 42354506 - 42354600
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||| || ||||||||||||| || |||  |||||||||||||||||    
T  42354506 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgctt 42354600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 44507027 - 44507101
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| |||||||    
T  44507027 tttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtatgcttgt 44507101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 42221697 - 42221601
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||| ||| ||||||||||| | ||||  |||||||||||||||||||    
T  42221697 ggaaaatgttatataaacatcctttatttacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 42221601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 34307394 - 34307295
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| ||||||| ||||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 40467882 - 40467784
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||||||| ||||| ||||| |||||| |   |||||||||||||| | ||||||||||||| | ||||| |||||||||||||||||||||    
T  40467882 ggaaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtgcttgtgc 40467784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 16056322 - 16056422
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  216 t 216  Q
    |    
T  16056422 t 16056422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 24307715 - 24307814
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| ||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 32707921 - 32708012
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtg 204  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtg 32708012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 32032906 - 32032805
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || ||   ||||||||||||| ||||||||    
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgca 32032807  T
Q  213 gg 214  Q
    ||    
T  32032806 gg 32032805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 10621047 - 10621103
Alignment:
Q  155 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  10621047 tacatcccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 10621103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 30479396 - 30479490
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 30479490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 20074916 - 20074963
Alignment:
Q  169 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||||    
T  20074916 taggaagagagaagagaagaggaaagagaaagtgtgcttgtgcagggt 20074963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 30183794 - 30183887
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    ||||||||||| ||| ||| ||||||||  ||||||| ||||||||||||||| ||| |||||| |||| | || |  |||||||||||||||||    
T  30183794 ggaaaatgttagatagacatcctttatttacatacactcttgtacaccccatatatttggaagaaagaagatga-atgaaagagaaagtgtgctt 30183887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 16383521 - 16383456
Alignment:
Q  151 cttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| ||||    
T  16383521 cttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 16383456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 17444005 - 17443917
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgt 203  Q
    ||||||||||||| |||||||||||    ||||| ||||||||| | ||| || | ||||||||||| || |||  |||||||||||||    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgt 17443917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 35523058 - 35522960
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  35523058 ggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgc 35522960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 19330020 - 19329921
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 31736059 - 31735961
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31736059 ggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 31735961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 8080305 - 8080404
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 38837395 - 38837296
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38837296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 46033719 - 46033817
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||    
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgc 46033817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 32951415 - 32951514
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32951514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 4999436 - 4999535
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| |||||| ||||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggt 4999535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 7389566 - 7389468
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||| |||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  7389566 aatgatacatagacatcctttattcccatacaccct-gtacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggt 7389468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 21234583 - 21234480
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||||| | |||||||  |||||||| |||||||||||     
T  21234583 ggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgcg 21234484  T
Q  213 gggt 216  Q
    ||||    
T  21234483 gggt 21234480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 16374743 - 16374839
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||| | ||||  |||||||| |||||||||||    
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtg 16374839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 40957885 - 40957793
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgt 40957793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 41423864 - 41423768
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||||||| ||||||  ||||||||| | |||||||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgt 41423768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 26296826 - 26296723
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    |||||||||||| || ||||| | |||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| || ||||||||     
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcg 26296727  T
Q  213 gggt 216  Q
    ||||    
T  26296726 gggt 26296723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 3784157 - 3784079
Alignment:
Q  133 cctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  3784157 cctttattcacatacattcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 3784079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 19436114 - 19436199
Alignment:
Q  122 tacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtgctt 19436199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 46374742 - 46374807
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagaga 178  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46374742 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagaga 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 3694520 - 3694451
Alignment:
Q  142 ccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||| |||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  3694520 ccatacactcttgtacaccccatgcattgggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 3694451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 35137685 - 35137612
Alignment:
Q  143 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  35137685 catacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 35137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 38267200 - 38267119
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||| ||||||||| | ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  38267200 tttatttccatacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38267119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 216
Target Start/End: Complemental strand, 41915921 - 41915820
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| ||||||| ||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  215 gt 216  Q
    ||    
T  41915821 gt 41915820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 27744227 - 27744321
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    ||||||||||| ||||||||| |||||||||||| | ||||||||| ||||| || ||||||||||||| ||||||| | ||||||| |||||||    
T  27744227 ggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgctt 27744321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 3434730 - 3434666
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaa 181  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 8238395 - 8238292
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| || || |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  8238395 ggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 8238296  T
Q  213 gggt 216  Q
    ||||    
T  8238295 gggt 8238292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 11044356 - 11044257
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||| |||||||  |||||||| ||||||||| ||| |||||||||||||||| | ||||| ||||||||||||| ||||||| ||||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtacttgtgcggggt 11044257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 18207359 - 18207264
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||| ||| | ||||||||||  ||||||||||||||||| | || || ||||||||||||| ||||||  ||||||||||||||||||||    
T  18207359 aaaatgttagatagataccctttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtg 18207264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 22343543 - 22343440
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 22343444  T
Q  213 gggt 216  Q
    ||||    
T  22343443 gggt 22343440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 35468773 - 35468876
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||| | |||  | ||||||||||||| |||| || |||||||||||||| |||||||    
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgca 35468872  T
Q  213 gggt 216  Q
    ||||    
T  35468873 gggt 35468876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 38044379 - 38044276
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  |||||||||||| || || |||  ||||||||||||| |||||||     
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcg 38044280  T
Q  213 gggt 216  Q
    ||||    
T  38044279 gggt 38044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 216
Target Start/End: Complemental strand, 7728086 - 7727985
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| ||||| |||| |  |||||| |||||||||||||||| ||||||||||||||| || |||  ||| ||||||||| ||||||| ||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  215 gt 216  Q
    ||    
T  7727986 gt 7727985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 1766702 - 1766795
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||||||||||| |||| |||| ||| |||| || |||||| ||| |||| | || |||||||||| ||||||| |||||||||||||||||||    
T  1766702 aaatgttacatagacacactttgttctcatatactcttgtatacctcatatactacgaagagagaagaggagaggaaagagaaagtgtgcttgt 1766795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 12311086 - 12310985
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||| |   || | ||||||||||||| |||| || ||||| ||| ||||||||| ||    
T  12311086 ggaaaatgttacatagacaccctttatttccatacacctttgtacatcttgtatactaggaagagagaagaggaaaggaaagataaaatgtgcttgttca 12310987  T
Q  213 gg 214  Q
    ||    
T  12310986 gg 12310985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 39255844 - 39255939
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||  | || ||   ||||||||||| ||||||  ||||||||||||| ||||||    
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgttcttgtg 39255939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 36362192 - 36362131
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagaga 178  Q
    |||| |||||| ||||||||||||| |||||||||||||||| |||||  ||||||||||||    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatgtattaggaagaga 36362131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 2318160 - 2318255
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattag-ga-agagagaataggagagaaaagagaaagtgtgctt 207  Q
    |||||||||||||| |||| ||||||| ||||||||| |||||||| |||| |||||| || |||||||| | ||||  ||||||||||| |||||    
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagtatgctt 2318255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 36208299 - 36208252
Alignment:
Q  169 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  36208299 taggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggt 36208252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 32564374 - 32564447
Alignment:
Q  143 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||||||||||||||| |||  ||||||||||||||| || |||  |||||||||||||  |||||| ||||    
T  32564374 catacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtatttgtgcggggt 32564447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 36361847 - 36361908
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagaga 178  Q
    |||| |||||| ||||||||||||| ||||||||||||||||  ||||  ||||||||||||    
T  36361847 aatgatacatagacaccctttattctcatacacccttgtacattccatgtattaggaagaga 36361908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 40846031 - 40846134
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| | ||| |||| |  |||||||||||||||| | |||   |||||||||||||| || |||  |||||||||||||  ||||||     
T  40846031 ggaaaatgttacatagataccttttaattgcatacacccttgtacatctcatcttttaggaagagagaagagaagaagaaagagaaagtgtatttgtgcg 40846130  T
Q  213 gggt 216  Q
    ||||    
T  40846131 gggt 40846134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 10343531 - 10343573
Alignment:
Q  163 atacattaggaagagagaataggagagaaaagagaaagtgtgc 205  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||    
T  10343531 atacactaggaagagagaagaggagaggaaagagaaagtgtgc 10343573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 45223222 - 45223128
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||| ||||| ||| ||||||||  |||||| | |||||||||||||| ||| | ||||||||| | ||||  ||||||||| || ||||||    
T  45223222 aaaatgtcacatagacatcctttatttacatacatctttgtacaccccatatatttgaaagagagaagatgagatgaaagagaaaatgcgcttgt 45223128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 206
Target Start/End: Complemental strand, 32046018 - 32045926
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgct 206  Q
    |||||||||||||| |||  |||||||  |||||||||||||||| | |||| ||| | ||||||||| | ||||  ||| ||||||| ||||    
T  32046018 gaaaatgttacatagacattctttatttacatacacccttgtacatctcatatatttgaaagagagaagatgagatgaaaaagaaagtatgct 32045926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 31976430 - 31976327
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31976331  T
Q  213 gggt 216  Q
    ||||    
T  31976330 gggt 31976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 31110679 - 31110782
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgca 31110778  T
Q  213 gggt 216  Q
    ||||    
T  31110779 gggt 31110782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 32869856 - 32869757
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 11427796 - 11427702
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 11427702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 17598732 - 17598633
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 22880580 - 22880679
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 22880679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 29858005 - 29857915
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgctt 29857915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 15989960 - 15990063
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15990059  T
Q  213 gggt 216  Q
    ||||    
T  15990060 gggt 15990063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 23128067 - 23128142
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  23128067 tttatttccatacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtg 23128142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 30341278 - 30341381
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  30341278 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 30341377  T
Q  213 gggt 216  Q
    ||||    
T  30341378 gggt 30341381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 15832743 - 15832658
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||| |||  |||||||||    
T  15832743 acaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcagg 15832658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 4231730 - 4231627
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 4231631  T
Q  213 gggt 216  Q
    ||||    
T  4231630 gggt 4231627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 6209388 - 6209486
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| | ||||||||||||| |||| | ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  6209388 aatgatacatagataccctttattccc-tacatctttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggt 6209486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 15507942 - 15508045
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||| |||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  15507942 ggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15508041  T
Q  213 gggt 216  Q
    ||||    
T  15508042 gggt 15508045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 31952948 - 31953045
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||| || ||||||||||||| || |||  |||||||||||||| |||||    
T  31952948 ggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgtg 31953045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 28536408 - 28536503
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||  ||| | ||||||  |||||||||||||||||||||| || ||||||||| ||| || ||| |||||||||||||||||||||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtg 28536503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 216
Target Start/End: Complemental strand, 30870193 - 30870093
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||| ||| ||||||||||||  |||||||| |||||||||| ||| | ||| ||||||||| ||||||| ||||||||| ||||||||||| ||    
T  30870193 aaaatgtta-atagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 30870095  T
Q  215 gt 216  Q
    ||    
T  30870094 gt 30870093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 31109351 - 31109421
Alignment:
Q  146 acacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||| ||| ||| ||||    
T  31109351 acacccttgtataccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtacttttgcggggt 31109421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 946520 - 946465
Alignment:
Q  151 cttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgct 206  Q
    |||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||    
T  946520 cttgtacatctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgct 946465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 22421997 - 22422043
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacac 159  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  22421997 ggaaaatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 26466799 - 26466850
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccat 164  Q
    |||||||||||||||||||||||||||||| | || || |||||||| ||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccat 26466850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 3213400 - 3213428
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  3213400 ggaaaatgttacataaacaccctttattc 3213428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 21293777 - 21293749
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  21293777 ggaaaatgttacataaacaccctttattc 21293749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 41236525 - 41236426
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 31910374 - 31910271
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||     
T  31910374 ggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcg 31910275  T
Q  213 gggt 216  Q
    ||||    
T  31910274 gggt 31910271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 29240068 - 29239971
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||    
T  29240068 ggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtg 29239971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 42044289 - 42044388
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 42044388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 48182971 - 48183070
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 6034222 - 6034128
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 6034128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 40574959 - 40574865
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||| ||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgt 40574865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 24995029 - 24995128
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||| ||||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 41824064 - 41823961
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||||| ||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||     
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 41823965  T
Q  213 gggt 216  Q
    ||||    
T  41823964 gggt 41823961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 50052346 - 50052449
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||  || || ||||||||||||| ||||||| |||||||||||||||||||||     
T  50052346 ggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcg 50052445  T
Q  213 gggt 216  Q
    ||||    
T  50052446 gggt 50052449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 54473455 - 54473554
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  54473455 aatgatacatgaacaccctttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggt 54473554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 50526089 - 50526187
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||| ||||||||||    
T  50526089 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgc 50526187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 480382 - 480461
Alignment:
Q  130 caccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||| ||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  480382 cacccattatttccatacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgt 480461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 23608413 - 23608320
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    |||| |||||| ||| |||||||||||||||| || |||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  23608413 aatgatacatagacatcctttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtg 23608320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 11511402 - 11511483
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||| ||||||||||||||||||| ||| ||||| |||||||||| || |||||||||||||||||||||||||| ||||    
T  11511402 tttatttccatacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggt 11511483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 19670634 - 19670737
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  19670634 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 19670733  T
Q  213 gggt 216  Q
    ||||    
T  19670734 gggt 19670737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 55475373 - 55475270
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||| ||||    
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgca 55475274  T
Q  213 gggt 216  Q
    ||||    
T  55475273 gggt 55475270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 29234205 - 29234266
Alignment:
Q  155 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  29234205 tacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 29234266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 56300086 - 56300184
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||| || |||  |||||||| ||||||  |||||||| | |||||||||| ||||||||| ||||||| |||||||||||||| |||||||||    
T  56300086 aaatgttacgtagacattctttattctcatacaatcttgtacatctcatacattagaaagagagaagaggagaggaaagagaaagtgtgtttgtgcagg 56300184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 29978065 - 29977970
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||| | | | |||||||| |||||| |||||||||||||||||||||  ||||| || || |||  ||||||||||||||||||||    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtg 29977970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 50813810 - 50813913
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||| | |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50813909  T
Q  213 gggt 216  Q
    ||||    
T  50813910 gggt 50813913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 18924413 - 18924511
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||||||| ||||| |||| |  ||||||||||| |||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||    
T  18924413 ggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 18924511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 29547877 - 29547967
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgt 203  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||| |||||||    
T  29547877 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgt 29547967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 53352496 - 53352587
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||  ||||||||||||||||||        ||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacacc--------taggaagagagaagaggagagaaaagagaaagtatgcttgtgcggggt 53352587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 17983664 - 17983764
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||||||||||| ||||  |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  17983664 aaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 17983763  T
Q  216 t 216  Q
    |    
T  17983764 t 17983764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 43487883 - 43487793
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||| |||||||||||||||||| |  |||||||| |||||||||||||| ||||||| || |     |||| ||||||||||||||||||||    
T  43487883 aaaatgtcacataaacaccctttatttcagtacaccctggtacaccccatacactaggaagtgaaa-----agagcaaagagaaagtgtgcttgtg 43487793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 47986389 - 47986287
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| || ||| | ||||||||||||||| |||||  ||||||||||||||| || | |  ||||||||||||| |||||||     
T  47986389 ggaaaatgttacatagacacctttaattgc-atacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtacttgtgcg 47986291  T
Q  213 gggt 216  Q
    ||||    
T  47986290 gggt 47986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 28480186 - 28480283
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||    
T  28480186 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28480283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 28481061 - 28481158
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||    
T  28481061 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28481158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 28481936 - 28482033
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||    
T  28481936 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28482033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 29589658 - 29589755
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||| ||||||| ||||| |||| |  ||||||| |||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||    
T  29589658 ggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 29589755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 32767140 - 32767037
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||  |||| |  ||||||||||||||||| | ||  ||||| ||||||||  || |||  ||||||||||||| ||||||||    
T  32767140 ggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgtacttgtgca 32767041  T
Q  213 gggt 216  Q
    ||||    
T  32767040 gggt 32767037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 48647645 - 48647742
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||| ||| | ||||||   ||||| | |||||||  | || || ||||||||||||| ||||||| ||||||||| |||||||||||    
T  48647645 gaaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgc 48647742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 1771366 - 1771315
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccat 164  Q
    |||||||||||||| ||||||||||||||| | || || |||||||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccat 1771315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 3481826 - 3481787
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacaccct 152  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  3481826 ggaaaatgttacatagacaccctttattctcatacaccct 3481787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 44536664 - 44536754
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgt 203  Q
    ||||||||||||||| ||||  |||| |  ||||||  ||||||||||| ||  ||||||||||||||| || |||  |||||||||||||    
T  44536664 ggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgt 44536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 47104723 - 47104629
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||| || ||||  ||||||| | ||||  || ||||||| ||| ||||| |||||||||| ||||||  |||||||||||||| |||||    
T  47104723 aaatgttacgtagacactttttattctcgtacattctagtacacctcatgcattaagaagagagaagaggagatgaaagagaaagtgtgtttgtg 47104629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 55966446 - 55966418
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  55966446 ggaaaatgttacataaacaccctttattc 55966418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 848 - 945
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 848 - 945
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 4207 - 4117
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgctt 4117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 10031 - 10123
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||| |||||| |||||| ||||| |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  10031 aatgatacatagacacccattatttccatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgt 10123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 8781 - 8878
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||||||||| ||||||||||||||| | | ||| ||||||||| ||| ||||||    
T  8781 ggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtg 8878  T

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Target: scaffold0316 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 17285 - 17199
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaa 199  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||  |||   ||||||||||||| ||||||| |||||||||    
T  17285 ggaaaatgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagaggagaggaaagagaaa 17199  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 152679 - 152590
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgt 203  Q
    |||||||||||||| ||||| |||| |  |||||||||||||||| |||||  ||||| ||||||||| || |||  |||||||||||||    
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgt 152590  T

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