View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7036_low_10 (Length: 326)

Name: NF7036_low_10
Description: NF7036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7036_low_10
NF7036_low_10
[»] chr8 (21 HSPs)
chr8 (48-207)||(24889691-24889850)
chr8 (48-219)||(25502022-25502194)
chr8 (48-207)||(25429024-25429183)
chr8 (48-219)||(25470579-25470758)
chr8 (33-225)||(25668030-25668215)
chr8 (20-176)||(25501799-25501958)
chr8 (48-177)||(25687830-25687956)
chr8 (48-146)||(25826429-25826527)
chr8 (48-172)||(25408497-25408619)
chr8 (102-201)||(25331851-25331950)
chr8 (50-167)||(25380412-25380528)
chr8 (53-120)||(25711588-25711654)
chr8 (155-202)||(25711667-25711714)
chr8 (55-146)||(25486535-25486625)
chr8 (50-146)||(25688919-25689014)
chr8 (48-83)||(25501755-25501790)
chr8 (20-53)||(24889886-24889919)
chr8 (20-53)||(25331734-25331767)
chr8 (20-53)||(25408427-25408460)
chr8 (20-53)||(25428954-25428987)
chr8 (20-53)||(25470510-25470543)
[»] chr2 (3 HSPs)
chr2 (110-219)||(40025686-40025796)
chr2 (54-84)||(30932676-30932706)
chr2 (177-219)||(40024335-40024377)
[»] scaffold0070 (1 HSPs)
scaffold0070 (50-146)||(40651-40748)
[»] chr1 (2 HSPs)
chr1 (217-251)||(42438839-42438873)
chr1 (224-253)||(24780695-24780724)
[»] chr4 (3 HSPs)
chr4 (222-251)||(4946347-4946376)
chr4 (217-254)||(36315461-36315498)
chr4 (217-254)||(36329670-36329707)
[»] scaffold0009 (1 HSPs)
scaffold0009 (223-251)||(193873-193901)
[»] chr5 (1 HSPs)
chr5 (223-251)||(40835872-40835900)


Alignment Details
Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 24889850 - 24889691
Alignment:
Q  48 ccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattccaatgcgtccaacaataattcattaca 147  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||     
T  24889850 ccaagttgcaatttaaaagtcagtcaatgaaaaaaggacaagagtatagcgtacataattgcatggaaaattctaatatgtccaagaataattcattact 24889751  T
Q  148 atccgacgatgactattaagcattgattttctacctcttaattctcatcttcgcgcattc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24889750 atccgacgatgactattaagcattgattttctacctcttaattctcatcttcgcgcattc 24889691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 25502022 - 25502194
Alignment:
Q  48 ccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataa-ttgcatggaaaattccaatgcgtccaacaataattcattac 146  Q
    ||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||| |||| ||||||| | |||| |||||    
T  25502022 ccaagttgcaatttaaaagtcagtcaaggaaaaaaggacaaaactatagcgtacataaattgcatggaaaattctaatgtgtccaacgaaaatttattac 25502121  T
Q  147 aatccgacgatgactattaagcattgattttctacctcttaattctcatcttcgcgcattcacgttgttatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  25502122 aatccgacgatgactattaagcattgattttctacctcttaattctcatcttcgcggattcttgttgttatgt 25502194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 25429024 - 25429183
Alignment:
Q  48 ccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattccaatgcgtccaacaataattcattaca 147  Q
    |||||||||||||||||||||||||||  ||| ||| |||| ||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||     
T  25429024 ccaagttgcaatttaaaagtcagtcaagaaaagaaggacaagagtatagcgtacataattgcatggaaaattctaatatgtccaagaataattcattact 25429123  T
Q  148 atccgacgatgactattaagcattgattttctacctcttaattctcatcttcgcgcattc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25429124 atccgacgatgactattaagcattgattttctacctcttaattctcatcttcgcgcattc 25429183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 25470579 - 25470758
Alignment:
Q  48 ccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattccaatgcgtccaacaataattcattaca 147  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  25470579 ccaagttgcaatttaaaagtcagtcaatgaaaaaaggacaaaagtatagcgtacataattgcatggaaaattccaatatgtccaacaataattcattaca 25470678  T
Q  148 atccgacgatgactattaagcat--------tgattttctacctcttaattctcatcttcgcgcattcacgttgttatgt 219  Q
    |||||||||| |||| |||||||        |||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  25470679 atccgacgattactagtaagcattgatttaatgattttctacctcttaattctcaccttcgcggattcatgttgttatgt 25470758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 33 - 225
Target Start/End: Original strand, 25668030 - 25668215
Alignment:
Q  33 agtgcttcaaatcaaccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtata-gcgtacataattgcatggaaaattccaatgcgtcca 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||| |||||| ||||||| ||||||||||||||||| |   | ||      
T  25668030 agtgcttaaaatcaaccaagttgcaatttaaaagtcagtcaacaaaaaaaggacaagagtataagcgtacaaaattgcatggaaaattcta---cctct- 25668125  T
Q  132 acaataattcattacaatccgacgatgactattaagcattgattttctacctcttaattctcatcttcgcgcattcacgttgttatgttatgta 225  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25668126 ----taattcattacaatccgacgatgactattaagcattgattttctacctcttaattctcatcttcgcgcattcacgttgttatgttatgta 25668215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 176
Target Start/End: Original strand, 25501799 - 25501958
Alignment:
Q  20 tgttggtaggggcagtgcttcaaatc----aaccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaa 115  Q
    ||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25501799 tgttggtaggggcagtgcttcaaatcaatcaaccaagttgcaatttaaaagtcagtcaatgaaaaaaggacaaaagtatagcgtacataattgcatggaa 25501898  T
Q  116 aattccaatgcgtccaacaataattcattacaatccgacgatgactattaagcattgattt 176  Q
    ||||| |||| |||||||||||||||||||||| | || ||||||||| ||||||||||||    
T  25501899 aattctaatgtgtccaacaataattcattacaacctga-gatgactatcaagcattgattt 25501958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 25687830 - 25687956
Alignment:
Q  48 ccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattccaatgcgtccaacaataattcattaca 147  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||    
T  25687830 ccaatttgcaacttaaaagtcagtcaatgaaaaaaggacaaaagtatagcgtacaaaattgcatggaaaattctaatgtgtccaacaataattcattaca 25687929  T
Q  148 atccgacgatgactattaagcattgatttt 177  Q
    |   ||||||||| ||||||||||||||||    
T  25687930 a---gacgatgaccattaagcattgatttt 25687956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 25826429 - 25826527
Alignment:
Q  48 ccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattccaatgcgtccaacaataattcattac 146  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  25826429 ccaagttgcaatttaaaagtcagtcaatgaaaaaaggacaaaagtatagcgtacataattgcatggaaaattctaatgtgtccaacaataattcattac 25826527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 48 - 172
Target Start/End: Original strand, 25408497 - 25408619
Alignment:
Q  48 ccaagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattccaatgcgtccaacaataattcattaca 147  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||||||||    
T  25408497 ccaagttgcaatttaaaagtcagtcaacgaaaaaaggacaaaagtatagcgtacataattgcatggaaaattctaatatgtcc-acaataattcattaca 25408595  T
Q  148 atccgacgatgactattaagcattg 172  Q
    ||| || |||||||||  |||||||    
T  25408596 atctga-gatgactatcgagcattg 25408619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 25331851 - 25331950
Alignment:
Q  102 ataattgcatggaaaattccaatgcgtccaacaataattcattacaatccgacgatgactattaagcattgattttctacctcttaattctcatcttcgc 201  Q
    ||||||||| ||||||||| |||  |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25331851 ataattgcaaggaaaattctaatatgtccaagaataattcattacaatccgacaatgactattaagcattgattttctacctcttaattctcatcttcgc 25331950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 25380412 - 25380528
Alignment:
Q  50 aagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattccaatgcgtccaacaataattcattacaat 149  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||| | |||| |||||| ||||||||||||||||    
T  25380412 aagttgcaatttacaagtcagtcaacgaaaaaagaacaagagtat-gcgtacataattacatggaaaatgctaatgggtccaagaataattcattacaat 25380510  T
Q  150 ccgacgatgactattaag 167  Q
    |  || ||||||||||||    
T  25380511 cttactatgactattaag 25380528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 25711588 - 25711654
Alignment:
Q  53 ttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattc 120  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  25711588 ttgcaatttaaaagtcagtcaatgaaaaagga-caaaagtatagcgtacataattgcatggaaaattc 25711654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 25711667 - 25711714
Alignment:
Q  155 gatgactattaagcattgattttctacctcttaattctcatcttcgcg 202  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  25711667 gatgattatcaagcattgattttctacctcttaattctcatcttcgcg 25711714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 25486535 - 25486625
Alignment:
Q  55 gcaatttaaaagtcagtcaatgaaaaaagaacaaaagtata--gcgtacataattgcatggaaaattccaatgcgtccaacaataattcattac 146  Q
    |||||||||||||||||||| |||||||| |||| ||||||  ||||   |||||||||||||||||| |||| | |||| ||||| |||||||    
T  25486535 gcaatttaaaagtcagtcaaagaaaaaaggacaagagtatatagcgt---taattgcatggaaaattctaatgtggccaagaataactcattac 25486625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 25688919 - 25689014
Alignment:
Q  50 aagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtatagcgtacataattgcatggaaaattccaatgcgtccaacaataattcattac 146  Q
    ||||||||||||||||||||||||| ||||||||||||| | ||| | |||||||||| | |||||| | |  ||| |||| | |||||||||||||    
T  25688919 aagttgcaatttaaaagtcagtcaacgaaaaaagaacaagaatat-gtgtacataattacctggaaattgctgatgggtcctagaataattcattac 25689014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 25501755 - 25501790
Alignment:
Q  48 ccaagttgcaatttaaaagtcagtcaatgaaaaaag 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  25501755 ccaagttgcaatttaaaagtcagtcaatgaaaaaag 25501790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 24889919 - 24889886
Alignment:
Q  20 tgttggtaggggcagtgcttcaaatcaaccaagt 53  Q
    ||||||||||||||||||||||||||||||||||    
T  24889919 tgttggtaggggcagtgcttcaaatcaaccaagt 24889886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 25331734 - 25331767
Alignment:
Q  20 tgttggtaggggcagtgcttcaaatcaaccaagt 53  Q
    ||||||||||||||||||||||||||||||||||    
T  25331734 tgttggtaggggcagtgcttcaaatcaaccaagt 25331767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 25408427 - 25408460
Alignment:
Q  20 tgttggtaggggcagtgcttcaaatcaaccaagt 53  Q
    ||||||||||||||||||||||||||||||||||    
T  25408427 tgttggtaggggcagtgcttcaaatcaaccaagt 25408460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 25428954 - 25428987
Alignment:
Q  20 tgttggtaggggcagtgcttcaaatcaaccaagt 53  Q
    ||||||||||||||||||||||||||||||||||    
T  25428954 tgttggtaggggcagtgcttcaaatcaaccaagt 25428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 25470510 - 25470543
Alignment:
Q  20 tgttggtaggggcagtgcttcaaatcaaccaagt 53  Q
    ||||||||||||||||||||||||||||||||||    
T  25470510 tgttggtaggggcagtgcttcaaatcaaccaagt 25470543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 40025796 - 40025686
Alignment:
Q  110 atggaaaattccaatgcgtccaacaataattcattacaatccgacga-tgactattaagcattgattttctacctcttaattctcatcttcgcgcattca 208  Q
    ||||||||| | |||| |||||| || ||||| |||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  40025796 atggaaaatgctaatgtgtccaaaaacaattccttacaatctgacaaatgactattaagcattgattttcaacctcttaattctcatcttcgtgcattct 40025697  T
Q  209 cgttgttatgt 219  Q
     ||||||||||    
T  40025696 tgttgttatgt 40025686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 30932676 - 30932706
Alignment:
Q  54 tgcaatttaaaagtcagtcaatgaaaaaaga 84  Q
    |||||||||||||||||||||||||||||||    
T  30932676 tgcaatttaaaagtcagtcaatgaaaaaaga 30932706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 40024377 - 40024335
Alignment:
Q  177 tctacctcttaattctcatcttcgcgcattcacgttgttatgt 219  Q
    |||||||||||||||||||||||| ||||||  ||||||||||    
T  40024377 tctacctcttaattctcatcttcgtgcattcttgttgttatgt 40024335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 40748 - 40651
Alignment:
Q  50 aagttgcaatttaaaagtcagtcaatgaaaaaagaacaaaagtat-agcgtacataattgcatggaaaattccaatgcgtccaacaataattcattac 146  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||  |||||||||||| |||| || || | |||| |||||| |||||||||||||    
T  40748 aagttgcaatttaaaagtcagtcaacgaaaaaagaacaagagtatgcgcgtacataattacatgaaatatgctaatgggtccaagaataattcattac 40651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 42438873 - 42438839
Alignment:
Q  217 tgttatgtactagtgtaacgccccgtgccaagcac 251  Q
    |||||| ||||||||||||||||||||||||||||    
T  42438873 tgttatatactagtgtaacgccccgtgccaagcac 42438839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 24780724 - 24780695
Alignment:
Q  224 tactagtgtaacgccccgtgccaagcacag 253  Q
    ||||||||||||||||||||||||||||||    
T  24780724 tactagtgtaacgccccgtgccaagcacag 24780695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Complemental strand, 4946376 - 4946347
Alignment:
Q  222 tgtactagtgtaacgccccgtgccaagcac 251  Q
    ||||||||||||||||||||||||||||||    
T  4946376 tgtactagtgtaacgccccgtgccaagcac 4946347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 36315461 - 36315498
Alignment:
Q  217 tgttatgtactagtgtaacgccccgtgccaagcacaga 254  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  36315461 tgttatttactagtgtaatgccccgtgccaagcacaga 36315498  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 36329670 - 36329707
Alignment:
Q  217 tgttatgtactagtgtaacgccccgtgccaagcacaga 254  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  36329670 tgttatttactagtgtaatgccccgtgccaagcacaga 36329707  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 193873 - 193901
Alignment:
Q  223 gtactagtgtaacgccccgtgccaagcac 251  Q
    |||||||||||||||||||||||||||||    
T  193873 gtactagtgtaacgccccgtgccaagcac 193901  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 40835900 - 40835872
Alignment:
Q  223 gtactagtgtaacgccccgtgccaagcac 251  Q
    |||||||||||||||||||||||||||||    
T  40835900 gtactagtgtaacgccccgtgccaagcac 40835872  T

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