View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7038_high_18 (Length: 209)
Name: NF7038_high_18
Description: NF7038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7038_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 43921062 - 43921235
Alignment:
| Q |
17 |
aatattttgtagaagttgcagaaaatgatgaaatttgtaaaatgaaagagagtacttactgtgtagatcaaagaaactactagttgcatttatcattggg |
116 |
Q |
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| T |
43921062 |
aatattttgtagaagttgcagaaaatgatgaaatttgtaaaatgaaagagagtacttactgtgtagatcaaagaaactactagttgcatttatcattggg |
43921161 |
T |
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| Q |
117 |
aatttggtagaaaataaggtaagagactagtagtttttactagcgttgactggtagttagtcaaatgtatagag |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
43921162 |
aatttggtagaaaataaggtaagagactagtagtttttactagcattgactggtagttagtcaaatgtatagag |
43921235 |
T |
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