View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7038_low_13 (Length: 356)

Name: NF7038_low_13
Description: NF7038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7038_low_13
NF7038_low_13
[»] chr1 (63 HSPs)
chr1 (1-351)||(48947204-48947554)
chr1 (1-119)||(16113919-16114039)
chr1 (1-119)||(33791727-33791845)
chr1 (1-116)||(39973892-39974007)
chr1 (1-110)||(35259043-35259152)
chr1 (1-85)||(31043001-31043085)
chr1 (1-115)||(4040893-4041007)
chr1 (1-119)||(34861200-34861318)
chr1 (1-115)||(40286858-40286972)
chr1 (21-118)||(38172665-38172762)
chr1 (1-109)||(40053293-40053401)
chr1 (16-119)||(49478827-49478931)
chr1 (1-100)||(3047867-3047966)
chr1 (2-119)||(48874-48991)
chr1 (1-118)||(35543392-35543509)
chr1 (1-98)||(42573778-42573875)
chr1 (11-111)||(290601-290701)
chr1 (12-114)||(51904562-51904664)
chr1 (12-112)||(1656447-1656548)
chr1 (1-110)||(24034057-24034166)
chr1 (1-103)||(10355031-10355133)
chr1 (22-119)||(31652643-31652740)
chr1 (1-112)||(759221-759333)
chr1 (21-116)||(30548293-30548387)
chr1 (22-109)||(40203076-40203163)
chr1 (1-112)||(46804819-46804930)
chr1 (1-86)||(31807800-31807886)
chr1 (27-101)||(9931801-9931875)
chr1 (1-117)||(40341601-40341718)
chr1 (52-119)||(12148287-12148354)
chr1 (23-110)||(44461597-44461683)
chr1 (1-115)||(290841-290955)
chr1 (1-87)||(26700249-26700335)
chr1 (12-101)||(32787261-32787351)
chr1 (33-102)||(45753482-45753551)
chr1 (12-115)||(24075110-24075214)
chr1 (26-118)||(40377067-40377159)
chr1 (22-101)||(5115612-5115691)
chr1 (1-100)||(31398418-31398517)
chr1 (46-115)||(30350911-30350978)
chr1 (35-120)||(39807557-39807643)
chr1 (32-101)||(25302103-25302172)
chr1 (1-86)||(33744156-33744241)
chr1 (52-101)||(47364049-47364098)
chr1 (22-119)||(50974562-50974659)
chr1 (12-100)||(44442261-44442349)
chr1 (1-72)||(4521043-4521114)
chr1 (14-109)||(14758572-14758667)
chr1 (22-117)||(31745397-31745492)
chr1 (47-102)||(34596125-34596180)
chr1 (1-120)||(36321612-36321731)
chr1 (17-100)||(43216299-43216382)
chr1 (47-101)||(9590913-9590967)
chr1 (59-117)||(44719239-44719297)
chr1 (33-102)||(7750463-7750532)
chr1 (17-62)||(8791485-8791530)
chr1 (48-109)||(18038940-18039001)
chr1 (12-53)||(19533280-19533321)
chr1 (15-114)||(38320538-38320636)
chr1 (244-309)||(39988000-39988065)
chr1 (244-308)||(37621614-37621678)
chr1 (65-101)||(42564262-42564298)
chr1 (26-102)||(50222612-50222688)
[»] chr7 (47 HSPs)
chr7 (1-119)||(8237950-8238068)
chr7 (2-110)||(19619993-19620101)
chr7 (1-119)||(34299731-34299849)
chr7 (1-119)||(5907824-5907941)
chr7 (11-120)||(5482395-5482503)
chr7 (1-119)||(43492189-43492308)
chr7 (1-110)||(44452038-44452148)
chr7 (1-92)||(24299146-24299237)
chr7 (1-88)||(41150034-41150121)
chr7 (1-119)||(3267598-3267716)
chr7 (1-119)||(24610826-24610944)
chr7 (1-109)||(25036962-25037071)
chr7 (1-120)||(26871771-26871890)
chr7 (1-103)||(39316297-39316399)
chr7 (1-117)||(39241570-39241687)
chr7 (21-107)||(7432656-7432743)
chr7 (1-115)||(23682444-23682557)
chr7 (1-100)||(34681692-34681791)
chr7 (12-109)||(38988717-38988816)
chr7 (1-76)||(31498660-31498735)
chr7 (22-113)||(38452192-38452283)
chr7 (1-88)||(46716179-46716266)
chr7 (1-119)||(10031909-10032027)
chr7 (1-99)||(18926327-18926425)
chr7 (1-110)||(26872781-26872891)
chr7 (40-92)||(32699395-32699447)
chr7 (1-104)||(47507610-47507713)
chr7 (1-119)||(9097683-9097800)
chr7 (1-55)||(35395908-35395962)
chr7 (1-98)||(41431099-41431197)
chr7 (1-74)||(1360536-1360609)
chr7 (66-119)||(47305514-47305567)
chr7 (12-61)||(48837977-48838025)
chr7 (17-109)||(31902747-31902839)
chr7 (1-119)||(27123274-27123393)
chr7 (1-103)||(35496576-35496679)
chr7 (1-92)||(35599817-35599908)
chr7 (17-86)||(3256648-3256718)
chr7 (22-120)||(8170052-8170150)
chr7 (22-76)||(10453485-10453539)
chr7 (23-109)||(34398074-34398159)
chr7 (27-112)||(8327824-8327909)
chr7 (22-103)||(17883317-17883398)
chr7 (24-101)||(40722382-40722459)
chr7 (1-57)||(6392181-6392237)
chr7 (22-101)||(35567135-35567215)
chr7 (34-82)||(37352436-37352484)
[»] chr8 (53 HSPs)
chr8 (1-119)||(12002267-12002385)
chr8 (1-110)||(1876479-1876588)
chr8 (1-119)||(14016855-14016973)
chr8 (12-114)||(11533243-11533345)
chr8 (3-101)||(44220716-44220814)
chr8 (11-110)||(31844214-31844314)
chr8 (1-109)||(32271170-32271278)
chr8 (42-119)||(36907841-36907918)
chr8 (1-119)||(39594477-39594595)
chr8 (12-110)||(40628964-40629062)
chr8 (1-100)||(44907218-44907318)
chr8 (1-108)||(38019418-38019524)
chr8 (12-110)||(7627844-7627942)
chr8 (1-109)||(38047607-38047716)
chr8 (1-109)||(2376726-2376834)
chr8 (1-88)||(20522944-20523031)
chr8 (6-119)||(41959969-41960083)
chr8 (12-119)||(30486620-30486728)
chr8 (1-103)||(1445137-1445240)
chr8 (1-109)||(1773799-1773908)
chr8 (12-87)||(18842275-18842350)
chr8 (12-87)||(37449551-37449626)
chr8 (17-118)||(4278957-4279057)
chr8 (17-101)||(35592455-35592539)
chr8 (1-109)||(39691112-39691220)
chr8 (19-116)||(14453699-14453794)
chr8 (48-110)||(34722774-34722837)
chr8 (1-110)||(5020051-5020158)
chr8 (1-110)||(35501064-35501174)
chr8 (1-93)||(9629833-9629925)
chr8 (28-109)||(26014752-26014833)
chr8 (1-98)||(31264997-31265094)
chr8 (1-61)||(30158108-30158168)
chr8 (1-93)||(37564346-37564438)
chr8 (1-112)||(12782777-12782888)
chr8 (11-44)||(9005010-9005043)
chr8 (8-109)||(27505979-27506079)
chr8 (1-109)||(42636363-42636472)
chr8 (12-109)||(43419730-43419827)
chr8 (12-93)||(43841043-43841124)
chr8 (13-109)||(41105996-41106092)
chr8 (1-85)||(42801078-42801162)
chr8 (51-98)||(7931765-7931812)
chr8 (22-101)||(45368729-45368808)
chr8 (1-71)||(24103087-24103157)
chr8 (1-103)||(34336477-34336579)
chr8 (13-86)||(37813423-37813497)
chr8 (67-116)||(32133686-32133735)
chr8 (57-118)||(44960519-44960580)
chr8 (17-101)||(6270334-6270418)
chr8 (69-109)||(33285923-33285963)
chr8 (1-93)||(33636718-33636810)
chr8 (31-103)||(44254131-44254203)
[»] chr4 (62 HSPs)
chr4 (1-118)||(53261558-53261675)
chr4 (1-119)||(40252656-40252773)
chr4 (1-80)||(49951717-49951796)
chr4 (12-118)||(53622314-53622421)
chr4 (12-100)||(45743326-45743414)
chr4 (1-100)||(36876064-36876163)
chr4 (1-119)||(37461460-37461578)
chr4 (1-100)||(52650697-52650796)
chr4 (1-110)||(3179003-3179113)
chr4 (12-115)||(38354473-38354577)
chr4 (1-100)||(31262916-31263014)
chr4 (1-100)||(47937863-47937962)
chr4 (1-110)||(49795145-49795254)
chr4 (8-129)||(18939846-18939967)
chr4 (2-75)||(23136539-23136612)
chr4 (1-110)||(17970810-17970917)
chr4 (13-109)||(41370166-41370262)
chr4 (1-99)||(4391968-4392067)
chr4 (12-118)||(35153262-35153369)
chr4 (12-111)||(50617507-50617606)
chr4 (1-98)||(25042743-25042836)
chr4 (1-119)||(32175433-32175550)
chr4 (45-120)||(20022234-20022309)
chr4 (11-118)||(22889270-22889377)
chr4 (11-118)||(22940934-22941041)
chr4 (33-119)||(49446581-49446667)
chr4 (1-101)||(21687591-21687692)
chr4 (1-93)||(2063475-2063567)
chr4 (6-116)||(39767212-39767323)
chr4 (26-89)||(44570122-44570185)
chr4 (1-91)||(49622961-49623052)
chr4 (1-109)||(8297871-8297980)
chr4 (12-65)||(21241138-21241191)
chr4 (11-109)||(7996722-7996816)
chr4 (1-92)||(19597165-19597256)
chr4 (33-104)||(36721589-36721660)
chr4 (33-119)||(49421882-49421969)
chr4 (1-118)||(39724055-39724175)
chr4 (1-88)||(12618713-12618800)
chr4 (11-114)||(23614626-23614729)
chr4 (25-88)||(14949006-14949069)
chr4 (59-118)||(41468142-41468201)
chr4 (1-100)||(48097952-48098051)
chr4 (47-101)||(1696194-1696248)
chr4 (13-103)||(25115267-25115357)
chr4 (48-118)||(38949048-38949118)
chr4 (47-109)||(41956428-41956490)
chr4 (22-102)||(50115068-50115145)
chr4 (13-98)||(23016231-23016316)
chr4 (1-70)||(24369407-24369476)
chr4 (142-187)||(31295885-31295930)
chr4 (1-70)||(37179691-37179760)
chr4 (12-76)||(41394013-41394078)
chr4 (1-86)||(44690284-44690369)
chr4 (22-99)||(51105943-51106020)
chr4 (47-119)||(7628005-7628077)
chr4 (26-114)||(20390050-20390138)
chr4 (1-93)||(24546722-24546814)
chr4 (51-103)||(24753978-24754030)
chr4 (1-61)||(40173524-40173584)
chr4 (49-93)||(42901983-42902027)
chr4 (47-119)||(44647869-44647941)
[»] chr6 (26 HSPs)
chr6 (1-119)||(29716752-29716871)
chr6 (12-112)||(10364754-10364854)
chr6 (131-207)||(33619252-33619328)
chr6 (1-119)||(23344571-23344690)
chr6 (1-93)||(13445745-13445837)
chr6 (1-116)||(5704549-5704663)
chr6 (12-120)||(21130707-21130816)
chr6 (23-118)||(34552311-34552407)
chr6 (12-119)||(10429739-10429845)
chr6 (1-109)||(27752646-27752759)
chr6 (19-119)||(34552165-34552265)
chr6 (1-116)||(34552494-34552609)
chr6 (1-100)||(6586424-6586523)
chr6 (50-118)||(1479081-1479149)
chr6 (1-98)||(3753103-3753201)
chr6 (1-98)||(3769326-3769424)
chr6 (22-88)||(6546738-6546804)
chr6 (32-102)||(7465508-7465578)
chr6 (67-109)||(26187452-26187494)
chr6 (1-43)||(26187510-26187552)
chr6 (22-100)||(31702747-31702825)
chr6 (209-303)||(33618740-33618834)
chr6 (1-110)||(354576-354685)
chr6 (47-115)||(22695473-22695542)
chr6 (1-109)||(27778754-27778862)
chr6 (1-109)||(30509316-30509424)
[»] chr3 (48 HSPs)
chr3 (1-118)||(48551040-48551157)
chr3 (11-109)||(14146110-14146208)
chr3 (1-112)||(3026979-3027091)
chr3 (1-109)||(45757929-45758037)
chr3 (1-110)||(12140145-12140255)
chr3 (1-109)||(20821303-20821412)
chr3 (1-119)||(24313551-24313670)
chr3 (4-119)||(25317808-25317923)
chr3 (1-120)||(46725657-46725776)
chr3 (37-110)||(33072108-33072181)
chr3 (12-88)||(37388418-37388494)
chr3 (33-119)||(1511367-1511453)
chr3 (1-86)||(29612020-29612106)
chr3 (1-93)||(54911201-54911293)
chr3 (17-110)||(40614263-40614356)
chr3 (27-119)||(18399147-18399239)
chr3 (22-109)||(1829243-1829330)
chr3 (13-119)||(22772872-22772979)
chr3 (1-76)||(28691955-28692030)
chr3 (3-87)||(9342672-9342757)
chr3 (1-90)||(53040469-53040558)
chr3 (78-118)||(39651994-39652034)
chr3 (1-92)||(45584343-45584432)
chr3 (47-102)||(25548203-25548258)
chr3 (1-72)||(48322241-48322312)
chr3 (1-56)||(50644134-50644189)
chr3 (40-110)||(52340118-52340188)
chr3 (2-103)||(37359467-37359570)
chr3 (19-72)||(40546345-40546398)
chr3 (1-109)||(49168741-49168849)
chr3 (22-102)||(19898107-19898187)
chr3 (47-119)||(54911986-54912058)
chr3 (13-88)||(2831559-2831634)
chr3 (23-70)||(25061987-25062034)
chr3 (1-72)||(37708437-37708508)
chr3 (1-95)||(38009033-38009128)
chr3 (12-65)||(12908860-12908913)
chr3 (65-110)||(27968262-27968307)
chr3 (18-119)||(34758946-34759047)
chr3 (27-104)||(41750755-41750832)
chr3 (24-93)||(43803992-43804061)
chr3 (1-109)||(23554672-23554779)
chr3 (48-100)||(40690235-40690287)
chr3 (29-93)||(46547794-46547858)
chr3 (12-72)||(46711949-46712009)
chr3 (200-252)||(53195445-53195497)
chr3 (22-98)||(53766702-53766777)
chr3 (1-89)||(54290795-54290883)
[»] chr5 (45 HSPs)
chr5 (1-120)||(14309071-14309193)
chr5 (1-115)||(38594923-38595037)
chr5 (12-118)||(26453630-26453735)
chr5 (28-114)||(16636656-16636742)
chr5 (1-117)||(17774272-17774388)
chr5 (12-116)||(22601786-22601890)
chr5 (1-117)||(26432262-26432378)
chr5 (14-117)||(27325814-27325917)
chr5 (1-87)||(12221437-12221523)
chr5 (12-110)||(21259415-21259513)
chr5 (1-66)||(41568708-41568773)
chr5 (1-93)||(4695072-4695164)
chr5 (12-115)||(29829601-29829704)
chr5 (26-116)||(3263772-3263862)
chr5 (22-112)||(27794854-27794944)
chr5 (1-109)||(10228319-10228426)
chr5 (12-92)||(26686667-26686747)
chr5 (12-92)||(26956398-26956478)
chr5 (11-117)||(10410460-10410567)
chr5 (1-88)||(36609150-36609237)
chr5 (1-119)||(5356286-5356404)
chr5 (1-119)||(5758562-5758680)
chr5 (26-114)||(8247092-8247180)
chr5 (12-118)||(43000760-43000868)
chr5 (19-117)||(28639570-28639669)
chr5 (26-116)||(10051755-10051845)
chr5 (33-119)||(31672444-31672530)
chr5 (1-74)||(26663635-26663708)
chr5 (1-74)||(26935230-26935303)
chr5 (11-88)||(39177691-39177768)
chr5 (59-119)||(22473493-22473553)
chr5 (1-109)||(31914170-31914277)
chr5 (47-93)||(31889662-31889708)
chr5 (1-93)||(967102-967194)
chr5 (22-98)||(14475009-14475085)
chr5 (22-109)||(14042484-14042571)
chr5 (1-103)||(30104804-30104907)
chr5 (1-119)||(30501127-30501246)
chr5 (1-119)||(30541470-30541589)
chr5 (1-72)||(34032125-34032196)
chr5 (34-115)||(28207696-28207778)
chr5 (19-108)||(779104-779192)
chr5 (48-109)||(20125652-20125713)
chr5 (1-93)||(25437888-25437981)
chr5 (1-37)||(9740932-9740968)
[»] chr2 (62 HSPs)
chr2 (1-112)||(12848467-12848578)
chr2 (1-98)||(24389632-24389729)
chr2 (11-110)||(33068540-33068639)
chr2 (1-100)||(33454968-33455067)
chr2 (15-119)||(431621-431726)
chr2 (12-101)||(12205530-12205620)
chr2 (1-98)||(6083911-6084008)
chr2 (1-86)||(8964392-8964477)
chr2 (12-109)||(30523014-30523111)
chr2 (1-101)||(6334678-6334778)
chr2 (1-93)||(565706-565800)
chr2 (15-110)||(42342487-42342581)
chr2 (1-114)||(6411367-6411480)
chr2 (19-112)||(32066740-32066833)
chr2 (12-109)||(33634796-33634893)
chr2 (1-109)||(9049148-9049256)
chr2 (1-110)||(3074080-3074187)
chr2 (12-119)||(40874826-40874934)
chr2 (1-76)||(4654992-4655067)
chr2 (12-115)||(21277564-21277666)
chr2 (12-63)||(30822764-30822815)
chr2 (1-86)||(2825977-2826062)
chr2 (11-115)||(9448465-9448570)
chr2 (13-82)||(12762896-12762965)
chr2 (1-117)||(29685694-29685810)
chr2 (1-100)||(13538396-13538495)
chr2 (1-80)||(30869589-30869666)
chr2 (11-109)||(11385462-11385561)
chr2 (36-114)||(28695605-28695684)
chr2 (1-103)||(18043841-18043942)
chr2 (16-93)||(27692744-27692822)
chr2 (47-116)||(5961954-5962023)
chr2 (12-96)||(37284896-37284981)
chr2 (1-117)||(2796517-2796624)
chr2 (30-110)||(10183219-10183299)
chr2 (1-88)||(11944892-11944979)
chr2 (42-93)||(15806054-15806105)
chr2 (12-114)||(3666431-3666533)
chr2 (32-102)||(6761731-6761801)
chr2 (13-87)||(9153494-9153568)
chr2 (67-109)||(33898643-33898685)
chr2 (52-101)||(7271831-7271880)
chr2 (12-97)||(8086966-8087051)
chr2 (16-101)||(8333580-8333665)
chr2 (1-93)||(814996-815088)
chr2 (4-92)||(18684365-18684453)
chr2 (1-49)||(28858104-28858152)
chr2 (14-118)||(33962932-33963036)
chr2 (1-113)||(39647767-39647879)
chr2 (11-114)||(44838626-44838730)
chr2 (32-116)||(44941072-44941156)
chr2 (1-88)||(19890208-19890295)
chr2 (1-76)||(37313700-37313775)
chr2 (47-109)||(16944811-16944873)
chr2 (47-109)||(17015476-17015538)
chr2 (12-86)||(19495215-19495288)
chr2 (65-102)||(11364702-11364739)
chr2 (255-316)||(14368577-14368638)
chr2 (1-86)||(25622534-25622618)
chr2 (65-102)||(32787586-32787623)
chr2 (65-101)||(21004775-21004811)
chr2 (1-88)||(41543977-41544065)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-93)||(26701-26793)
[»] scaffold0236 (1 HSPs)
scaffold0236 (12-120)||(19578-19686)
[»] scaffold0037 (1 HSPs)
scaffold0037 (12-115)||(35274-35376)
[»] scaffold0053 (1 HSPs)
scaffold0053 (12-55)||(5773-5816)


Alignment Details
Target: chr1 (Bit Score: 343; Significance: 0; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 48947204 - 48947554
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48947204 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 48947303  T
Q  101 agtccttaactagtgccccatttcccatatttatatatagttagttagtagttttatggagttaggaaatggtggttaataaactacctcttctactata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48947304 agtccttaactagtgccccatttcccatatttatatatagttagttagtagttttatggagttaggaaatggtggttaataaactacctcttctactata 48947403  T
Q  201 taaatatgcattgtatgtgcaaggaaaatatgaagaaattaataatgaaattctagtctttcccccatttctatggagacctattccttctcgaattgga 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48947404 taaatatgcattgtatgtgcaaggaaaatatgaagaaattaataatgaaattctagtctttcccccatttctatggagacctattccttctcgaattgga 48947503  T
Q  301 atagttatctgtatcatcatatatcttatcagcctgctgctgatgtccatc 351  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  48947504 atagttatctgtatcatcatatatcttatcagcctgctgctaatgtgcatc 48947554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 16113919 - 16114039
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat--aaaaagttaccattt 98  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  16113919 tttaagcatactatattaagtaattattttttcaaaatgtcaaagttttcaatttccaatgcactgattacacaaactttcataaaaaaagttaccattt 16114018  T
Q  99 aaagtccttaactagtgcccc 119  Q
    ||   |||||| |||||||||    
T  16114019 aagccccttaagtagtgcccc 16114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 33791845 - 33791727
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || |||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||||    
T  33791845 tttaagtatgctaaattaagtaattattcttttaaaatgtcaaatttttcaatttccaatacaccgattacacaaactttcataaaaagttactatttaa 33791746  T
Q  101 agtccttaactagtgcccc 119  Q
    |||| ||||| ||||||||    
T  33791745 agtctttaaccagtgcccc 33791727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39973892 - 39974007
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| |||||| ||||| ||||||||||||||| |||||||    
T  39973892 tttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcattgattatacaaactttcataaaaagttatcatttaa 39973991  T
Q  101 agtccttaactagtgc 116  Q
    |||| ||||| |||||    
T  39973992 agtctttaaccagtgc 39974007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35259152 - 35259043
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||  ||||||||||||||||||    
T  35259152 tttaagtatgctaaattaagaaattattttttaaaaatgtaaaagttttcaatttccaatgcgctgattacacacacatttgtaaaaagttaccatttaa 35259053  T
Q  101 agtccttaac 110  Q
    ||||||||||    
T  35259052 agtccttaac 35259043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 31043001 - 31043085
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataa 85  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  31043001 tttaagcattctaaattaagtaattattttttaaaaatgtcaaagttttcaattttcaatgcattgattacacaaactttcataa 31043085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 4040893 - 4041007
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||  |||||||||||||||||   ||||| |||||||||||||||||| ||||  ||| |||||||||| ||||| ||||||||| |||||||    
T  4040893 tttaagcattttaaattaagtaattattacataaaagtgtcaaagttttcaattttcaatatacttattacacaaactttcacaaaaagttatcatttaa 4040992  T
Q  101 agtccttaactagtg 115  Q
    |||||||||||||||    
T  4040993 agtccttaactagtg 4041007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 34861318 - 34861200
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| ||| || ||||||||||  | || ||||||    
T  34861318 tttaagcattctaaattaagtaattattttttaaaaatgtcaaacatttcaatttccaatacactgatttcactaaatttcataaaagttaactatttaa 34861219  T
Q  101 agtccttaactagtgcccc 119  Q
     ||| ||||| ||||||||    
T  34861218 ggtcattaacgagtgcccc 34861200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40286858 - 40286972
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||| |||| |||||| ||| |||||   |||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||||    
T  40286858 tttaagcatgctaaataaagtcattattctttcaaaattaaaaagttttcaatttccaatgcactgagtacacaaacttttataaaaagttactatttaa 40286957  T
Q  101 agtccttaactagtg 115  Q
    ||| |||||||||||    
T  40286958 agttcttaactagtg 40286972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 38172665 - 38172762
Alignment:
Q  21 taattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 118  Q
    |||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||    
T  38172665 taattattctttaaaaatgtaaaagtttttaatttttaatgcactgattacacaaacttttataaaaagttatcatttaaagtccttaacaagtgccc 38172762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 40053293 - 40053401
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||| |||||| || |||||||||||||||||||||||||| |||| || | |||||||||| |||||||||||||||| ||||||    
T  40053293 tttaagcattctaaattaggtaattgttctttaaaaatgtcaaagttttcaattttcaatacatttattacacaaactttcataaaaagttactatttaa 40053392  T
Q  101 agtccttaa 109  Q
     ||| ||||    
T  40053393 ggtcattaa 40053401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 49478827 - 49478931
Alignment:
Q  16 ttaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 114  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| ||  || ||||||||||||||||  |||||||| |||    
T  49478827 ttaagtaattattttttttaaatgtcaaaagttttcaatttccaatgcactgattacacaaacttctatgaaaagttaccatttaagttccttaaccagt 49478926  T
Q  115 gcccc 119  Q
    |||||    
T  49478927 gcccc 49478931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3047867 - 3047966
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| ||||||||||||||| || ||||||||||||||| ||||| |||||||||||| |||||| ||||| ||||||||||| |||| ||||||    
T  3047867 tttaagcatgctaaattaagtaattgttctttaaaaatgtcaaatttttcgatttccaatgcattgattaaacaaactttcataaaaaattactatttaa 3047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 48991 - 48874
Alignment:
Q  2 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||| ||| |||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||| |||| || |||     
T  48991 ttaatcatgctaaattaagtaattattcttgaaaaatgtaaaagttttcaattttcaatgcaccgattacacaaactttcataaaaatttactatgtaag 48892  T
Q  102 gtccttaactagtgcccc 119  Q
    || |||||  ||||||||    
T  48891 gttcttaatgagtgcccc 48874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 35543509 - 35543392
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||  | | |||||||||| |||  || |||||||||||||||    
T  35543509 tttaagcatgctaaattaagtaattatttttttaaaatatcaaagttttcaatttccaatatattaattacacaaacttttgtacaaagttaccatttaa 35543410  T
Q  101 agtccttaactagtgccc 118  Q
     ||| ||||  |||||||    
T  35543409 ggtctttaataagtgccc 35543392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 42573875 - 42573778
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||||||| |||||||||||||||||| ||| ||||||| || ||||||||||| |||||||||||||| ||||| ||  |||||||||||||||||    
T  42573875 tttaagcatgctaaattaagtaattattcttttaaaatgttaaggttttcaattttcaatgcactgattatacaaacttcaataaaaagttaccattt 42573778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 290601 - 290701
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||  || ||||||||  |||||| || ||||||    
T  290601 ctaaattaagtaattattcttttaaaatgtcaaagttttcaatttacaatgcactgattacacaaacttcaatgaaaagttattatttaacgttcttaac 290700  T
Q  111 t 111  Q
    |    
T  290701 t 290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 51904664 - 51904562
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |  | |||||||| ||||||||||| || | |||||| ||||||||||    
T  51904664 taaattaagtaattattcttttaaaatgttaaagttttcaatttccaatgccccaactacacaaactttcataaaaaattgcaatttaaggtccttaact 51904565  T
Q  112 agt 114  Q
    |||    
T  51904564 agt 51904562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 1656447 - 1656548
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||  | | ||||||| ||||||||||||||||  |||||| ||| |||||    
T  1656447 taaattaaataattattttttaaaaatgtcaaaattttcaatttccaatgcattttaatacacaatttttcataaaaagttattatttaaggtcattaac 1656546  T
Q  111 ta 112  Q
    ||    
T  1656547 ta 1656548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24034057 - 24034166
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||||||||||  |||||||||| ||| ||||| | ||||||||||||||| ||||||||||||||||||| | | ||||||  |||| ||||||    
T  24034057 tttaagcatactaaatagagtaattattctttcaaaatttaaaagttttcaatttctaatgcactgattacacaaactcttataaaagtttactatttaa 24034156  T
Q  101 agtccttaac 110  Q
    ||||| ||||    
T  24034157 agtccataac 24034166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10355133 - 10355031
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || |||||| ||||||||||||||||||||| || || |||||||||||||||  || |||| |||||| || |||||||| |||||||||||    
T  10355133 tttaagtattctaaataaagtaattattttttaaaaatatctaaattttcaatttccaatataccgatttcacaaacttccataaaaaattaccatttaa 10355034  T
Q  101 agt 103  Q
    |||    
T  10355033 agt 10355031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 31652643 - 31652740
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||||||| |||||| ||||||  ||| ||||||| ||||| |||||||||| |||||||| | | |||||||||||||| ||||||||||||||||    
T  31652643 aattattttataaaaaagtcaaatattttaatttccgatgcaatgattacacatattttcatgataggttaccatttaaagcccttaactagtgcccc 31652740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 759333 - 759221
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||||| ||||||||| |||| ||||  ||||| ||||||||||| ||||||||||| ||| | |||||||||| || |||||||  ||||||||||    
T  759333 tttaagcattctaaattaaataatcatttcataaaattgtcaaagtttccaatttccaatacactttattacacaaacttacataaaagattaccattta 759234  T
Q  100 aagtccttaacta 112  Q
    |||| ||||||||    
T  759233 aagttcttaacta 759221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 30548293 - 30548387
Alignment:
Q  21 taattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 116  Q
    |||| ||||||||||| || |||| ||||||||||||||| |||||||||||| || ||||||||||  ||||||||||| || ||||||||||||    
T  30548293 taatcattttttaaaattgacaaacttttcaatttccaatacactgattacactaactttcataaaagtttaccatttaaggt-cttaactagtgc 30548387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 40203163 - 40203076
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||  |||||| ||||||  ||||||||||||||||| |||||||||| ||||||| | ||||||||||||||||| ||||||    
T  40203163 aattatttcataaaaaagtcaaatatttcaatttccaatgcattgattacacatattttcagacaaagttaccatttaaagaccttaa 40203076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 46804930 - 46804819
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| ||||||||| |||| ||||||||||||||  ||| |||  ||||||||||||||||||||||  || |||||||| |  |||||||||||    
T  46804930 tttaagcattctaaattaattaataattttttaaaaatgataaactttctaatttccaatgcactgattacattaactttcataatagtttaccatttaa 46804831  T
Q  101 agtccttaacta 112  Q
     ||| |||||||    
T  46804830 ggtcattaacta 46804819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31807886 - 31807800
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaa 86  Q
    ||||||||| ||||| |||||||||||| ||||||||||| | |||||||||||| |||||||| | |||||||||| |||||||||    
T  31807886 tttaagcattctaaaataagtaattattctttaaaaatgtgatagttttcaattttcaatgcactttattacacaaactttcataaa 31807800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 9931801 - 9931875
Alignment:
Q  27 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||||| |||||||||||||||||||||| |||| || | |||||||||| ||| ||||||| ||||||||||||    
T  9931801 tttttttaaaatgtcaaagttttcaattttcaatacattaattacacaaacttttataaaaaattaccatttaaa 9931875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40341601 - 40341718
Alignment:
Q  1 tttaagcatactaaattaagtaattatttt-ttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    |||||| || ||||||||||||||| ||||   |||||| ||||| |||||||||| ||||||||  ||||||| || ||||||||||  |||| |||||    
T  40341601 tttaagtattctaaattaagtaatttttttaaaaaaaatatcaaacttttcaattttcaatgcaccaattacactaactttcataaaagtttacgattta 40341700  T
Q  100 aagtccttaactagtgcc 117  Q
    | |||||||| |||||||    
T  40341701 aggtccttaattagtgcc 40341718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 12148354 - 12148287
Alignment:
Q  52 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    |||||||||||| || ||||||| |||||||| | |||||||||||||||| | ||||||||||||||    
T  12148354 atttccaatgcattggttacacatattttcatgataagttaccatttaaagactttaactagtgcccc 12148287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 44461597 - 44461683
Alignment:
Q  23 attattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||| ||| |||||||||||||||| |||||  |||||| | |||||||||||||||||||||| |||| ||||||| || |||||    
T  44461597 attattcttttaaaatgtcaaagtttttaatttttaatgca-taattacacaaattttcataaaaatttactatttaaaatctttaac 44461683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 290955 - 290841
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| ||||||  |||||||||| ||| ||||| | |||||||| |||||||||||| |||| |||||| | ||| |||||| ||||| || |||    
T  290955 tttaagcatgctaaatagagtaattattctttcaaaatttaaaagtttttaatttccaatgcgctgactacacatacttttataaaaggttactatctaa 290856  T
Q  101 agtccttaactagtg 115  Q
     ||| ||| ||||||    
T  290855 ggtctttagctagtg 290841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26700249 - 26700335
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 87  Q
    ||||| |||||||||| ||||||||||| ||| |||||   |||||||| |||||||||| |||| |||||||||| ||| ||||||    
T  26700249 tttaaacatactaaataaagtaattattcttttaaaattaaaaagtttttaatttccaatacactcattacacaaacttttataaaa 26700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 32787351 - 32787261
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaa 101  Q
    ||||||||||||||| | ||||||||||| ||||| ||||||| | ||| || |  |||||||||||||| |||||||||||| |||||||    
T  32787351 taaattaagtaattaatctttaaaaatgttaaagtgttcaattcctaatacattttattacacaaatttttataaaaagttactatttaaa 32787261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 45753482 - 45753551
Alignment:
Q  33 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    ||||||||||||  ||||||||| ||||||| |||||||||||||||||| ||||  ||| |||||||||    
T  45753482 aaaaatgtcaaatatttcaattttcaatgcattgattacacaaattttcaaaaaacattatcatttaaag 45753551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 24075110 - 24075214
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||| ||||  || ||||||||||||||||| || ||||| |||||||| | |||| | ||||||||| |||| |||| ||||||||||| |||||    
T  24075110 taaattaaataatatttctttaaaaatgtcaaagtgtttaattttcaatgcactttattatataaattttcaaaaaatgttatcatttaaagtctttaac 24075209  T
Q  111 tagtg 115  Q
     ||||    
T  24075210 cagtg 24075214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 40377067 - 40377159
Alignment:
Q  26 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 118  Q
    ||||| |||||| ||||||  |||  ||| ||||| || ||||||||||| ||||||| | || ||||||||||||| |||||||||||||||    
T  40377067 attttataaaaaagtcaaatattttgattcccaattcattgattacacaacttttcatgataaattaccatttaaaggccttaactagtgccc 40377159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 5115691 - 5115612
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||||| || |||||| || |||  ||||||||||||||||| | ||||||||||||| || ||||| ||||||||||||    
T  5115691 aattatgttataaaaaagttaaatatttcaatttccaatgcattaattacacaaatttacaaaaaaatttaccatttaaa 5115612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31398517 - 31398418
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| | |||||||||| |||||||||||| ||||||| ||| |||| |||||  |||| ||  |||||| ||||||| ||||||| |||| ||||||    
T  31398517 tttaagtagactaaattaaataattatttttttaaaatgtgaaattttttaatttataatgtaccaattacataaatttttataaaaaattactatttaa 31398418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 30350978 - 30350911
Alignment:
Q  46 ttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtg 115  Q
    |||||||||| ||||||| ||||||||| || |||||||||  |||||||||||| ||| ||||||||||    
T  30350978 ttttcaattttcaatgcattgattacactaactttcataaa--gttaccatttaaggtctttaactagtg 30350911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 39807557 - 39807643
Alignment:
Q  35 aaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 120  Q
    |||||| ||| |||||||||| |||||||||  |||||| ||| |||| ||||||| | ||||| |||||| |||||||||||||||    
T  39807557 aaatgttaaaattttcaattttcaatgcactttattacataaactttcgtaaaaagctgccattgaaagtctttaactagtgcccca 39807643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 25302103 - 25302172
Alignment:
Q  32 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||||| ||||||| |||| |||| |||| || |||||||||| |||||||| | |||||||||||||||    
T  25302103 taaaaaagtcaaagatttcgattttcaatacattgattacacatattttcatgataagttaccatttaaa 25302172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33744241 - 33744156
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 86  Q
    |||||||||  |||| |||||||||||||||| |||| ||||||  |||| |||| ||||||| |||||||| |  ||||||||||    
T  33744241 tttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatgcattgattacatattttttcataaa 33744156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 47364098 - 47364049
Alignment:
Q  52 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||||||    
T  47364098 atttctaatgaactgattacacaaattttcataaaaatttatcatttaaa 47364049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 50974659 - 50974562
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||||||| |||||| ||||||  ||||||||| | ||||| | |||||| | |||||||| | || |||||||||||||  |||||| ||||||||    
T  50974659 aattattttataaaaaagtcaaatatttcaattttcgatgcattaattacatatattttcatgataaattaccatttaaaggtcttaacgagtgcccc 50974562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 44442261 - 44442349
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||| | ||||||| |||||||| ||||||  ||||||||| |||| || | | |||||| ||||| |||||||||||| ||||||    
T  44442261 taaattaggaaattattctttaaaaaagtcaaatatttcaattttcaatacattaaatacacatatttttataaaaagttactatttaa 44442349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4521114 - 4521043
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 72  Q
    |||||||||||||||  |||  |||||| |||||||| || |||  ||||||||||||||||| ||||||||    
T  4521114 tttaagcatactaaaacaagcgattattctttaaaaaagttaaacatttcaatttccaatgcattgattaca 4521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 14758572 - 14758667
Alignment:
Q  14 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||| |||||||  ||||||| ||  ||  ||||||||| | ||||| ||| | ||||| |||||||||||| |||| |||||||||||||||    
T  14758572 aattaagaaattattccttaaaaaagtttaacatttcaattttcgatgcattgaatgcacaatttttcataaaaatttactatttaaagtccttaa 14758667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 31745492 - 31745397
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 117  Q
    ||||||||| ||| || ||||||  |||| |||  | ||||| |||||||||| ||||| || | ||||||| |||||||| ||||||||||||||    
T  31745492 aattattttataataaagtcaaatatttcgattctcgatgcattgattacacatatttttatgataagttactatttaaaggccttaactagtgcc 31745397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 34596180 - 34596125
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    |||| |||| ||||||| |||||||||| | ||||||||||||||| |||||||||    
T  34596180 tttcgattttcaatgcattgattacacataatttcataaaaagttatcatttaaag 34596125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36321731 - 36321612
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||||| |||  ||||||||||| |||| ||| || |||  |||| |||||||||||| ||||||||   ||||| ||||| | || | |||||     
T  36321731 tttaagcataccaaaacaagtaattattctttagaaaagttaaacatttcgatttccaatgcattgattacatgtatttttataaatacttgctatttat 36321632  T
Q  101 agtccttaactagtgcccca 120  Q
    |||||||||  |||||||||    
T  36321631 agtccttaaagagtgcccca 36321612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 43216382 - 43216299
Alignment:
Q  17 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||||||||| |||||| |||| ||| ||||||  |||| |||| |||||| || ||||||||||  |||| ||||||    
T  43216382 taagtaattattttttgaaaatgacaaattttccaatttttaatgaactggttacactaactttcataaaagtttactatttaa 43216299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 9590913 - 9590967
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||| |||| ||||| | |||||||||| |||||||||||| |||||||||||||    
T  9590913 tttcgatttacaatgtattgattacacacattttcataaaatgttaccatttaaa 9590967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 44719239 - 44719297
Alignment:
Q  59 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 117  Q
    ||||| |||||||||| |||||||| | || |||||||||||||  |||||||||||||    
T  44719239 atgcaatgattacacacattttcatgataaattaccatttaaagctcttaactagtgcc 44719297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 7750463 - 7750532
Alignment:
Q  33 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    ||||| ||||||  ||||||||||||||||| | |||| | || |||||| ||||||||||| |||||||    
T  7750463 aaaaaagtcaaatgtttcaatttccaatgcattaattatataacttttcaaaaaaagttaccttttaaag 7750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 8791530 - 8791485
Alignment:
Q  17 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgc 62  Q
    |||||||||| | ||||||||||| |||||||||||||| ||||||    
T  8791530 taagtaattagtctttaaaaatgtaaaagttttcaattttcaatgc 8791485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 18038940 - 18039001
Alignment:
Q  48 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||  || ||||||| ||||    
T  18038940 ttcaatttccgatgcattgaatacacaaattttcataaaaaattattatctaaagtctttaa 18039001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 19533280 - 19533321
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaat 53  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||    
T  19533280 taaattaagcaattattttttaaaaatatcaaacttttcaat 19533321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 38320636 - 38320538
Alignment:
Q  15 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta-cacaaattttcataaaaagttaccatttaaagtccttaactag 113  Q
    |||||||||||||| ||||||| | | ||| ||||| ||||| || |||||  ||| |||| ||||| ||||||||||||||||| ||||  ||||||||    
T  38320636 attaagtaattattctttaaaattattaaaattttcgatttctaaagcact--ttatcacacattttaataaaaagttaccatttgaagtttttaactag 38320539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Complemental strand, 39988065 - 39988000
Alignment:
Q  244 aatgaaattctagtctttcccccatttctatggagacctattccttctcgaattggaatagttatc 309  Q
    ||||||||||||||||| | |  ||||||  |||||  |||||||||||||||||||||| |||||    
T  39988065 aatgaaattctagtcttcctctaatttcttaggagagatattccttctcgaattggaataattatc 39988000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 37621614 - 37621678
Alignment:
Q  244 aatgaaattctagtctttcccccatttctatggagacctattccttctcgaattggaatagttat 308  Q
    ||||||||||||||||| | |  ||||||  |||||  |||||||||||||||||||||| ||||    
T  37621614 aatgaaattctagtcttcctctaatttcttaggagagatattccttctcgaattggaataattat 37621678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 42564262 - 42564298
Alignment:
Q  65 tgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  42564262 tgataacacaaattttcaaaaaaagttaccatttaaa 42564298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 50222688 - 50222612
Alignment:
Q  26 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    ||||| ||||||  |||||  ||| ||||| ||||||| |||||||||  ||||||||||||| |||| ||||||||    
T  50222688 attttataaaaaaatcaaatattttaattttcaatgcattgattacacttattttcataaaaaattactatttaaag 50222612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 5e-44; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 8237950 - 8238068
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  8237950 tttaagtatactaaattaagtaattattctttaaaaatgtcaaagttttcatttttcaatgcactgattacacaaactttcataaaaagttaccatttaa 8238049  T
Q  101 agtccttaactagtgcccc 119  Q
     ||||||||||| ||||||    
T  8238050 ggtccttaactaatgcccc 8238068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 19619993 - 19620101
Alignment:
Q  2 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||     
T  19619993 ttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaatttccaatgcactgattatacaacttttcataaaaagttactatttaag 19620092  T
Q  102 gtccttaac 110  Q
    | |||||||    
T  19620093 gcccttaac 19620101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 34299849 - 34299731
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||    
T  34299849 tttaagcatgctagattaagcaattattctttaaaaatgtcaaagttttcaatttacaaagcactgattacacaaactttcataaaaagttactatttaa 34299750  T
Q  101 agtccttaactagtgcccc 119  Q
     ||||||||| | ||||||    
T  34299749 ggtccttaaccaatgcccc 34299731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5907824 - 5907941
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||| ||||  |||||||||||||| ||||||| |||||||||||||  |||| ||||||    
T  5907824 tttaagcattctaaattaagtaattatttttttaaa-tgtcaaacttttttatttccaatgcactaattacactaattttcataaaagtttactatttaa 5907922  T
Q  101 agtccttaactagtgcccc 119  Q
    |||||||||||||||||||    
T  5907923 agtccttaactagtgcccc 5907941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 5482503 - 5482395
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||| ||||||||||||||||    
T  5482503 ctaaattaagtaattattcttttaaaatgtcaaagttttca-tttccaatgcattggttacacaaaatttcataaaaagttacaatttaaagtccttaac 5482405  T
Q  111 tagtgcccca 120  Q
      ||||||||    
T  5482404 ccgtgcccca 5482395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 43492308 - 43492189
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||||| |||||||||||||||||| |||| |||||||||| ||| ||||||||||||||| | |||||||||| ||| ||||||||||||||||||    
T  43492308 tttaagcattctaaattaagtaattattctttagaaatgtcaaaatttacaatttccaatgcactttattacacaaactttaataaaaagttaccattta 43492209  T
Q  100 aagtccttaactagtgcccc 119  Q
    ||  ||||||  ||||||||    
T  43492208 aatcccttaatcagtgcccc 43492189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44452148 - 44452038
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||| ||| |||||||||||||||||| ||||||||| |||||  |||||||||||||||||| | |||||||||| ||||||||||| |||| |||||    
T  44452148 tttaaacattctaaattaagtaattattatttaaaaatatcaaaagtttcaatttccaatgcactttattacacaaactttcataaaaaattactattta 44452049  T
Q  100 aagtccttaac 110  Q
    ||||| |||||    
T  44452048 aagtcattaac 44452038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24299237 - 24299146
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 92  Q
    |||||||||  ||||||||| |||||||  |||||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||||||    
T  24299237 tttaagcatgttaaattaagaaattattccttaaaaatgtcaaattttttaatttccaatgcactgattatacaacttttcataaaaagtta 24299146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41150121 - 41150034
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    |||||||||  ||||||||||||||||| ||||||| ||| |||| ||||||||  |||||||||||||| |||||||||||||||||    
T  41150121 tttaagcatcataaattaagtaattattctttaaaagtgttaaagatttcaattcacaatgcactgattatacaaattttcataaaaa 41150034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3267716 - 3267598
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||| ||||||||||| ||| ||||| | ||||||||| |||| ||||||||| |||||||||| ||| ||||||| || | |||| |    
T  3267716 tttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttccattttcaatgcactcattacacaaacttttataaaaacttgctatttta 3267617  T
Q  101 agtccttaactagtgcccc 119  Q
     ||||||||| ||||||||    
T  3267616 ggtccttaaccagtgcccc 3267598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24610944 - 24610826
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| ||| |||||||||  ||||||| ||| ||||||| |||||||| |||||| ||| |||| |||||||||| ||| ||||||| ||| |||||||    
T  24610944 tttaaacatgctaaattaaacaattattcttttaaaatgttaaagttttgaatttctaattcactaattacacaaacttttataaaaaattatcatttaa 24610845  T
Q  101 agtccttaactagtgcccc 119  Q
    ||||||||||  |||||||    
T  24610844 agtccttaacccgtgcccc 24610826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 25037071 - 25036962
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    |||||||||  ||||||||||||||||| |||||||| |||||| |||| ||||| |||||||| | ||| |||||| ||||||| |||||||| |||||    
T  25037071 tttaagcattttaaattaagtaattattatttaaaaaggtcaaaatttttaattttcaatgcactttattgcacaaactttcatagaaagttacaattta 25036972  T
Q  100 aagtccttaa 109  Q
    || |||||||    
T  25036971 aaatccttaa 25036962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26871771 - 26871890
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||| ||||||||||| ||| ||||| | |||||||| ||||| || |  |||||||||||||| ||| ||||||| |||| ||||||    
T  26871771 tttaagcatgctaaataaagtaattattcttttaaaatttaaaagttttgaattttcattatactgattacacaaacttttataaaaaattactatttaa 26871870  T
Q  101 agtccttaactagtgcccca 120  Q
     ||||||||| ||| |||||    
T  26871871 ggtccttaaccagtacccca 26871890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 39316399 - 39316297
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||| ||||||||||||||||| || || ||||||||| ||||||||||  | || |||| ||||||||  |||||||||||||||  ||||||    
T  39316399 tttaagcatattaaattaagtaattattcttcaataatgtcaaaattttcaatttttactgtactggttacacaagctttcataaaaagttataatttaa 39316300  T
Q  101 agt 103  Q
    |||    
T  39316299 agt 39316297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39241570 - 39241687
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    |||||||||  ||||||||| ||||||| ||||||||||||| |  |||||||||||||||| |||||||| || |  ||||||||||  |||||||||     
T  39241570 tttaagcattataaattaagcaattattctttaaaaatgtcataccttttcaatttccaatggactgattatactagctttcataaaagtttaccatttt 39241669  T
Q  100 aagtccttaactagtgcc 117  Q
    | ||||||||| ||||||    
T  39241670 aggtccttaaccagtgcc 39241687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 7432656 - 7432743
Alignment:
Q  21 taattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtcctt 107  Q
    |||||||| ||||||||| | |||||||| ||||| |||||||||  ||| |||||| ||| ||||||||||||||||||||||||||    
T  7432656 taattattatttaaaaatattaaagtttttaattttcaatgcactttattgcacaaacttttataaaaagttaccatttaaagtcctt 7432743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23682557 - 23682444
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt-a 99  Q
    ||||| ||| ||||||||| |||||||||||| |||||||||||||||| ||||| |||| || |||| | ||||| ||| ||||||||||||| ||| |    
T  23682557 tttaaacattctaaattaaataattatttttt-aaaatgtcaaagtttttaattttcaat-caatgataagacaaacttttataaaaagttaccctttaa 23682460  T
Q  100 aagtccttaactagtg 115  Q
    |||||||||| |||||    
T  23682459 aagtccttaattagtg 23682444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34681692 - 34681791
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||| | |||||||||||| ||| ||||||   |||||||||||||||| | | ||||||| |||| |||||||||||| ||||||    
T  34681692 tttaagcattctaaattaggaaattattttttacaaaagtcaaatagttcaatttccaatgcattaaatacacaagtttttataaaaagttactatttaa 34681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 38988717 - 38988816
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaat-tttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||||||| ||||||||| ||||| ||||| || |||||||||||||| | |||||| |||| ||| ||||||||||| |||||||||| |||||    
T  38988717 taaattaagtaataattttttaataatgttaaagtgtttaatttccaatgcactttattacataaatattttataaaaagttatcatttaaagtgcttaa 38988816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31498735 - 31498660
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 76  Q
    ||||| ||| ||||||||||||| |||||||| ||||||| |||||||||||||| |||| || ||||| ||||||    
T  31498735 tttaaacattctaaattaagtaaatatttttttaaaatgttaaagttttcaattttcaatacattgattgcacaaa 31498660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 38452192 - 38452283
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 113  Q
    ||||||||| |||||| ||||||  ||||||||||| ||||| || ||||||| |||||||||| || ||| | ||||||| ||||||||||    
T  38452192 aattattttataaaaaagtcaaatatttcaatttccgatgcattggttacacatattttcataataaattatcttttaaaggccttaactag 38452283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 46716179 - 46716266
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    ||||| ||| ||||||||| |||||||| ||||||||| |||||||||||||| | ||||||| | |||| ||||| ||| |||||||    
T  46716179 tttaaccattctaaattaaataattattctttaaaaatatcaaagttttcaatgttcaatgcattaattatacaaacttttataaaaa 46716266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10032027 - 10031909
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| | ||| | |||||||||||||| |||| || |||  |||| |||||||||||| ||||||||||  |||||||||| |  ||| |||||     
T  10032027 tttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgattacacactttttcataaatacatactatttat 10031928  T
Q  101 agtccttaactagtgcccc 119  Q
    |||||||||  ||||||||    
T  10031927 agtccttaaagagtgcccc 10031909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18926327 - 18926425
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    |||||||||  ||||| | | ||||||| |||||||| || |||   |||||||| ||||||| ||| ||||||| |||||||||||||||||||||||    
T  18926327 tttaagcattttaaatcatgaaattattctttaaaaaggtgaaatagttcaattttcaatgcattgaatacacaacttttcataaaaagttaccattta 18926425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26872891 - 26872781
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||||| |||||| ||||||||||| |||| |||| |||||  |||||||||||||||||  | |||| ||||| ||||| ||||| |||  |||||    
T  26872891 tttaagcattctaaatcaagtaattattatttataaatatcaaaagtttcaatttccaatgcattttattatacaaactttcacaaaaaattattattta 26872792  T
Q  100 aagtccttaac 110  Q
    ||||| |||||    
T  26872791 aagtctttaac 26872781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 32699395 - 32699447
Alignment:
Q  40 tcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 92  Q
    ||||| ||||||||||| |||||||||||| |||||| |||||||||||||||    
T  32699395 tcaaaattttcaatttcaaatgcactgattgcacaaactttcataaaaagtta 32699447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 47507610 - 47507713
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || |||||  ||| ||| ||||| ||||||  |||||| ||||||||||| ||| | ||||||||||  ||||||| | ||||||||||||||    
T  47507610 tttaaggattctaaaagaagaaataattttataaaaaaatcaaagatttcaatttccgatgtattgattacacattttttcatgagaagttaccatttaa 47507709  T
Q  101 agtc 104  Q
    ||||    
T  47507710 agtc 47507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9097800 - 9097683
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||||||||  |||  |||||||||  |||||  |||||  ||||||||||||||||| | | |||||| ||||||||||| | |||||| ||      
T  9097800 tttaagcatactaatataaacaattattttaaaaaaaa-tcaaatatttcaatttccaatgcaattaatacacacattttcataaatacttaccacttgt 9097702  T
Q  101 agtccttaactagtgcccc 119  Q
    |||| ||||||||||||||    
T  9097701 agtctttaactagtgcccc 9097683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35395908 - 35395962
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaattt 55  Q
    |||||| || ||| |||||||||||||||||||||||| |||||||||| |||||    
T  35395908 tttaagtattctatattaagtaattattttttaaaaatatcaaagtttttaattt 35395962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41431197 - 41431099
Alignment:
Q  1 tttaagcatactaaattaagtaattatttttt-aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    |||||||||  ||||||||| ||||||||||| |||||  | |||  |||||||||| |||| | ||||||| || ||||||||||||| |||||||||    
T  41431197 tttaagcattttaaattaagaaattatttttttaaaaaaattaaatatttcaatttctaatgtattgattactcatattttcataaaaacttaccattt 41431099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1360536 - 1360609
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 74  Q
    ||||||||| | ||| | ||||||||||||||||||| || |||  |||| |||||||||||| ||||||||||    
T  1360536 tttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcattgattacaca 1360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 47305567 - 47305514
Alignment:
Q  66 gattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||||||| |||||||| | |||||||||||||||  ||||||||||||||||    
T  47305567 gattacacatattttcatgataagttaccatttaaacaccttaactagtgcccc 47305514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 48837977 - 48838025
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 61  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  48837977 taaattaaataattatttt-taaaaatatcaaagttttcaatttccaatg 48838025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 31902839 - 31902747
Alignment:
Q  17 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||| |||||||  |||| || ||||||  ||||||||| |||| || ||| ||||||| ||| |||||||| |||| |||||||||||||||    
T  31902839 taagaaattattccttaagaaagtcaaatatttcaattttcaatacattgactacacaattttccataaaaatttactatttaaagtccttaa 31902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27123274 - 27123393
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttc-ataaaaagttaccattta 99  Q
    ||||||||| | ||||| |||||| ||| ||| |||| |||||   || |||||||||||||| | | ||||||| |||||  |||||| ||||||||||    
T  27123274 tttaagcatcccaaatttagtaatcattcttttaaaaagtcaactattacaatttccaatgcattaagtacacaacttttcgttaaaaacttaccattta 27123373  T
Q  100 aagtccttaactagtgcccc 119  Q
    |||| |||||  ||||||||    
T  27123374 aagtgcttaaagagtgcccc 27123393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35496679 - 35496576
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccattta 99  Q
    ||||||||| | ||||| ||||| ||| |||| |||| |||||   || |||||| ||||||| | ||||||||| ||||||| ||||| ||||||||||    
T  35496679 tttaagcatccaaaatttagtaactatatttttaaaaagtcaactattacaattttcaatgcattcattacacaatttttcattaaaaacttaccattta 35496580  T
Q  100 aagt 103  Q
    ||||    
T  35496579 aagt 35496576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35599908 - 35599817
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 92  Q
    ||||| |||||||||||| | ||||||| ||||||||  |||||   ||||| || ||||||| ||| |||| || ||||||||||||||||    
T  35599908 tttaaacatactaaattaggaaattattctttaaaaaattcaaatagttcaaatttcaatgcattgaatacataacttttcataaaaagtta 35599817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 3256718 - 3256648
Alignment:
Q  17 taagtaattattttttaaaaat-gtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 86  Q
    |||| ||||||| ||||||||  ||||||  |||| |||||||||||||||| |||||| |||||||||||    
T  3256718 taagcaattattctttaaaaaaagtcaaatgtttcgatttccaatgcactgaatacacatattttcataaa 3256648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 8170052 - 8170150
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 120  Q
    ||||||||| |||||| ||||||  |||  |||||| || || |||||| ||| || ||||| | |||||||  ||||||| |||||||||||||||||    
T  8170052 aattattttataaaaaagtcaaatattttgatttccgatacattgattatacatatgttcatgataagttactttttaaagaccttaactagtgcccca 8170150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 10453485 - 10453539
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 76  Q
    ||||||| ||||||||| | ||| |||||||||| ||||||| ||||||||||||    
T  10453485 aattattctttaaaaatattaaaattttcaattttcaatgcattgattacacaaa 10453539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 34398159 - 34398074
Alignment:
Q  23 attattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||||||||| ||||||   |||||||| ||||||| |||  ||||||||||| || |||| ||| ||||||||||| ||||    
T  34398159 attattttttaaaaaggtcaaatacttcaattttcaatgcattgaaaacacaaatttttat-aaaatttatcatttaaagtctttaa 34398074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 8327909 - 8327824
Alignment:
Q  27 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 112  Q
    ||||||||||| |||||||  ||||||||||||| || | | |||||||| ||| ||||||  ||||||||| | || ||||||||    
T  8327909 ttttttaaaaaagtcaaagacttcaatttccaatacaataaatacacaaacttttataaaatcttaccattttatgtgcttaacta 8327824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 17883398 - 17883317
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 103  Q
    |||||||||||||||| ||||||   || ||||||||| ||| ||||| || ||||||| | ||||| |||| |||||||||    
T  17883398 aattattttttaaaaaagtcaaaaactttaatttccaacgcattgatttcataaattttgacaaaaacttactatttaaagt 17883317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 40722382 - 40722459
Alignment:
Q  24 ttattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    ||||| ||||| || ||||||  ||||||||| ||||||| | ||||||||||||  |||||||| |||| |||||||    
T  40722382 ttattctttaagaaagtcaaatatttcaattttcaatgcattaattacacaaattaccataaaaacttactatttaaa 40722459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6392181 - 6392237
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttcc 57  Q
    ||||||||| |||||||||| ||||||| ||| ||||  | ||||||||||||||||    
T  6392181 tttaagcattctaaattaagaaattattctttcaaaacttaaaagttttcaatttcc 6392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 35567135 - 35567215
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaa 101  Q
    |||||||||||||||| ||||||  ||| |||||||||| || | | |||||| ||||| || ||||||||| ||||||||    
T  35567135 aattattttttaaaaaagtcaaatattttaatttccaatacattaaatacacatatttttataaaaaagttatcatttaaa 35567215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 37352484 - 37352436
Alignment:
Q  34 aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca 82  Q
    |||| ||||||  ||||||||||||||||| | ||||||||||||||||    
T  37352484 aaaaagtcaaatatttcaatttccaatgcattaattacacaaattttca 37352436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12002267 - 12002385
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  12002267 tttaagtatactaaattaagtaattattctttaaaaatgtaaaagttttcaatttccaatgcactgattacacaaatttttataaaaagttactatttaa 12002366  T
Q  101 agtccttaactagtgcccc 119  Q
      |||||||| ||||||||    
T  12002367 gatccttaaccagtgcccc 12002385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1876588 - 1876479
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  1876588 tttaagcatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcactgattacacaaactttcataaaaaattaccatttaa 1876489  T
Q  101 agtccttaac 110  Q
    ||||||||||    
T  1876488 agtccttaac 1876479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 14016973 - 14016855
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||| ||||||| ||| ||| ||||| | ||||||||||||||||||||||||||| ||||||| ||| ||||||| |||| ||||||    
T  14016973 tttaagcatgctaaataaagtaatgattctttcaaaatttaaaagttttcaatttccaatgcactgatcacacaaacttttataaaaaattactatttaa 14016874  T
Q  101 agtccttaactagtgcccc 119  Q
     ||||||||||||||||||    
T  14016873 ggtccttaactagtgcccc 14016855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 11533243 - 11533345
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||| ||||||||||| | ||||||||    
T  11533243 taaattaataaattattctttaaaaatgtcaaagttttcaatttccaatgcactgaaggcacaaactttcataaaaaattaccatttaaggcccttaact 11533342  T
Q  112 agt 114  Q
    |||    
T  11533343 agt 11533345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 44220814 - 44220716
Alignment:
Q  3 taagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  44220814 taagcatgttaaattaagtaattattcttttaaaatgtcaaagttttcaatttccaatgcactcattacacaaacgtccataaaaatttaccatttaaa 44220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 31844314 - 31844214
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||||||||||||  ||||||| ||||||||||| |||||||||||||| | |||| ||||| |||||||||||||||| |||||||||||||||    
T  31844314 ctaaattaagtaattattccttaaaaaagtcaaagttttgaatttccaatgcacttcattatacaaactttcataaaaagttactatttaaagtccttaa 31844215  T
Q  110 c 110  Q
    |    
T  31844214 c 31844214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32271170 - 32271278
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||| ||| || |||||||||||| || ||||||||| ||||||||||    
T  32271170 tttaagcattttaaattaagaaattattttttaaaaatgttaaagttttcaatttctaattcattgattacacaaacttccataaaaagataccatttaa 32271269  T
Q  101 agtccttaa 109  Q
     ||| ||||    
T  32271270 tgtctttaa 32271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 36907841 - 36907918
Alignment:
Q  42 aaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    |||||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||    
T  36907841 aaagttttcaatttccaatgcaatgattacacaaacttttataaaaagttactatttaaagtccttagctagtgcccc 36907918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39594595 - 39594477
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || |||||||||| ||||||| |||| |||| |||||||||||||||| || | ||||||||| ||||| ||||||||||||||| |||||||    
T  39594595 tttaagaatgctaaattaagaaattattctttataaatatcaaagttttcaattttcattacactgattatacaaactttcataaaaagttatcatttaa 39594496  T
Q  101 agtccttaactagtgcccc 119  Q
      |||||||| | ||||||    
T  39594495 gatccttaaccaatgcccc 39594477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 40629062 - 40628964
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||||||||||||  |||||||||| |||||||| |||||||||| ||||||||||||||| ||| ||||||  |||| |||||| |||||||||    
T  40629062 taaattaagtaattattcattaaaaatgttaaagtttttaatttccaattcactgattacacaaacttttataaaagattactatttaaggtccttaac 40628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44907218 - 44907318
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||| | ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| || |||| || ||||||||||| |||| |||||    
T  44907218 tttaagctttctaaattaagtaattattttttaaaaatgtcaaactttttcaattttcaatgcactaataacactaactttcataaaaatttactattta 44907317  T
Q  100 a 100  Q
    |    
T  44907318 a 44907318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38019524 - 38019418
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||| ||||||| ||||||| | | |||||||||||| || ||||||| ||||||||| | |||||||||| ||||||||||||    
T  38019524 tttaagcatgctaaattaagaaattattctttaaaatttttaaagttttcaatctctaatgcac-gattacacatactttcataaaatgttaccatttaa 38019426  T
Q  101 agtcctta 108  Q
     |||||||    
T  38019425 tgtcctta 38019418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 7627942 - 7627844
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||||||||||||||| |||||||| |||||||| |||||| ||| ||||||| ||||||| ||||||||||| ||||  |||| |||| |||||    
T  7627942 taaattaagtaattatttttaaaaaatgtgaaagtttttaatttctaatacactgatcacacaaactttcataaaaaattactttttatagtcattaac 7627844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38047716 - 38047607
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattta 99  Q
    ||||||||| ||||||||||||||| || |||| ||||||||||  ||| |||||  ||||||||  |||||||||| ||||||| ||||||| ||||||    
T  38047716 tttaagcattctaaattaagtaatttttctttataaatgtcaaaaattttaatttttaatgcactttattacacaaactttcatataaagttatcattta 38047617  T
Q  100 aagtccttaa 109  Q
    ||||||||||    
T  38047616 aagtccttaa 38047607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2376834 - 2376726
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||  |||||||| |||||||| ||||||||| ||||||||||||||||| || | | | |||| | ||| |||||||||||||||| ||||||    
T  2376834 tttaagcattttaaattaaataattattctttaaaaatatcaaagttttcaatttctaacgtattaattatataaactttcataaaaagttactatttaa 2376735  T
Q  101 agtccttaa 109  Q
     ||||||||    
T  2376734 ggtccttaa 2376726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20522944 - 20523031
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    ||||||||| |||| ||||||||||||| ||| ||||| | |||||||||||||| ||||||||| |||||| ||| |||||||||||    
T  20522944 tttaagcatgctaagttaagtaattattctttcaaaatttaaaagttttcaattttcaatgcactaattacataaactttcataaaaa 20523031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 41960083 - 41959969
Alignment:
Q  6 gcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtc 104  Q
    |||| ||| ||| |||||||||| ||||||||||| |||||||| |  ||||||||||||  |||| ||||| ||||||||||| ||| |||||||||||    
T  41960083 gcattctacatttagtaattattctttaaaaatgttaaagttttaagcttccaatgcactttattatacaaactttcataaaaaattatcatttaaagtc 41959984  T
Q  105 cttaactagtgcccc 119  Q
    |||||| ||| ||||    
T  41959983 cttaaccagtacccc 41959969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 30486620 - 30486728
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtccttaac 110  Q
    ||||| ||||||||||| ||| ||||| | |||||||| |||||  ||||||||||||||||||| ||| || ||||| |||| ||||||||||||||||    
T  30486620 taaataaagtaattattcttttaaaatttaaaagtttttaatttataatgcactgattacacaaacttttataaaaaaattactatttaaagtccttaac 30486719  T
Q  111 tagtgcccc 119  Q
     ||| ||||    
T  30486720 cagtacccc 30486728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1445240 - 1445137
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||| | ||||||||||||||   | ||||| ||||||||||| |||||||| |||||||| | |||||||||| ||| | ||||||||||||||||    
T  1445240 tttaagctttctaaattaagtaatatctctttaataatgtcaaagtgttcaattttcaatgcactttattacacaaacttttagaaaaagttaccattta 1445141  T
Q  100 aagt 103  Q
    ||||    
T  1445140 aagt 1445137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1773908 - 1773799
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt--caatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||||| | ||||||||||| |||||||||||||| ||||||| ||||  |||||||||||||||| ||| |||  | ||||||||||  |||| ||||    
T  1773908 tttaagctttctaaattaagttattattttttaaaa-tgtcaaacttttttcaatttccaatgcactaattgcacttactttcataaaagtttactattt 1773810  T
Q  99 aaagtccttaa 109  Q
    |||||||||||    
T  1773809 aaagtccttaa 1773799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 18842350 - 18842275
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 87  Q
    ||||||||||||||||| |||||||||||||||||||| |||||  |||| | |||||||||||| ||| ||||||    
T  18842350 taaattaagtaattattctttaaaaatgtcaaagtttttaatttttaatgtattgattacacaaacttttataaaa 18842275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 37449551 - 37449626
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 87  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||| |||| ||||| | || ||||||||||    
T  37449551 taaattaagtaattatttttttaaaatgtcaaacttttcaattttcaatacactaattacgctaactttcataaaa 37449626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 4278957 - 4279057
Alignment:
Q  17 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 116  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| |||  |||||||||| |||||  ||||  |||||| |||| |||||| |||||||    
T  4278957 taagtaattattttataaaaatgataaagttttcaatttccaatacac-cattacacaaactttcaccaaaaagtaccatctaaaatccttacctagtgc 4279055  T
Q  117 cc 118  Q
    ||    
T  4279056 cc 4279057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 35592455 - 35592539
Alignment:
Q  17 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||| ||||||||  |||||| ||||||  ||||||||||||| ||| |||| | |||||||| |||||||||||||||||||||    
T  35592455 taagaaattatttcgtaaaaaagtcaaatatttcaatttccaaggcaatgatcagacaaatttccataaaaagttaccatttaaa 35592539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 39691220 - 39691112
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| | | |||||  ||||||| |||||||| ||||||   |||||||| ||||||| ||| |||||||||||||||||||| |||| ||||||    
T  39691220 tttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaatacacaaattttcataaaaaattactatttaa 39691121  T
Q  101 agtccttaa 109  Q
      |||||||    
T  39691120 gatccttaa 39691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 14453699 - 14453794
Alignment:
Q  19 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 116  Q
    ||||||||||   |||||||||||||||||| ||||| |||||||| | |||||||||||||||| ||||  ||| ||||||||||| |||||||||||    
T  14453699 agtaattattccataaaaatgtcaaagtttttaattttcaatgcactttattacacaaattttcacaaaa--tta-catttaaagtctttaactagtgc 14453794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 34722837 - 34722774
Alignment:
Q  48 ttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||| |||||||||  |||| ||||| |||||||||||||||||||||||||||||||||    
T  34722837 ttcaattttcaatgcactttattatacaaactttcataaaaagttaccatttaaagtccttaac 34722774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5020158 - 5020051
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || |||||  ||| ||| ||||| |||||| ||||||| ||||||||||| || || |||||||||  |||||||| | ||||||||||||||    
T  5020158 tttaaggattctaaaagaagaaataattttataaaaaagtcaaagatttcaatttccgatacattgattacac--attttcatgacaagttaccatttaa 5020061  T
Q  101 agtccttaac 110  Q
    || |||||||    
T  5020060 aggccttaac 5020051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35501174 - 35501064
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||| ||| ||| ||| |||||||| | ||| ||||| | |||||||| |||||||||||||| | |||||||||| ||| ||||||| |||  |||||    
T  35501174 tttaaacattctacatttagtaattaatctttgaaaatattaaagtttttaatttccaatgcactttattacacaaacttttataaaaatttaatattta 35501075  T
Q  100 aagtccttaac 110  Q
    |||||||||||    
T  35501074 aagtccttaac 35501064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9629925 - 9629833
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||| | |||| |||||||||||||||| |||||||| ||| |||| |||||| ||||||| ||||||||  |||||||||||||| ||||    
T  9629925 tttaagctttctaatttaagtaattattttt-aaaaatgtaaaactttttcaattttcaatgcattgattacattaattttcataaaaatttac 9629833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 26014833 - 26014752
Alignment:
Q  28 tttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||| |||||||| ||  ||||||| |||||||||||||||||||||||  || |||||||||||| |||||  ||||||||    
T  26014833 ttttgaaaaatgttaatattttcaagttccaatgcactgattacacaaacatttataaaaagttactatttatggtccttaa 26014752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31264997 - 31265094
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||||||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||||||||| ||||    
T  31264997 tttaagcatgctaaattaggaagttattctttaaaaaagtcaaacaattcaatttccaatgtattaaatacacaagttttcataaaaagttactattt 31265094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30158168 - 30158108
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 61  Q
    ||||||||| ||||||||| |||||||| ||| ||||||| |||||||| |||||||||||    
T  30158168 tttaagcattctaaattaaataattattctttgaaaatgtaaaagtttttaatttccaatg 30158108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37564438 - 37564346
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||| ||| |||||||||| ||||||| |||||||| ||||||   |||||||||||||| | | | ||||||| ||||||||||| |||||    
T  37564438 tttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtattaaatacacaagttttcataaaaggttac 37564346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12782777 - 12782888
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||||||||| || | ||||||| |||||||| ||  ||  |||| |||||||||||| | |  ||||| ||||||||||| | |||||| |||     
T  12782777 tttaagcatactaaaatatgcaattattctttaaaaaagttgaatatttcgatttccaatgcaattaacacacacattttcataaatatttaccacttat 12782876  T
Q  101 agtccttaacta 112  Q
    ||||||||||||    
T  12782877 agtccttaacta 12782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 9005010 - 9005043
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaa 44  Q
    ||||||||||||||||||||||||||||||||||    
T  9005010 ctaaattaagtaattattttttaaaaatgtcaaa 9005043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 27506079 - 27505979
Alignment:
Q  8 atactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctt 107  Q
    |||||||||||||  |||||||||| |||| || |||  ||||||||| ||||||||| ||||||||| ||||  |||||| |||| |||||| ||| ||    
T  27506079 atactaaattaagatattatttttttaaaa-gtgaaatatttcaattttcaatgcactaattacacaattttttgtaaaaatttacaatttaaggtcatt 27505981  T
Q  108 aa 109  Q
    ||    
T  27505980 aa 27505979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 42636472 - 42636363
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccattta 99  Q
    ||||||||| | ||||| |||||||||| || ||||| |||||   || |||||| ||||||| | | ||||||| ||||||| ||||| ||||||||||    
T  42636472 tttaagcatcccaaatttagtaattattattcaaaaaagtcaactattacaatttacaatgcatttaatacacaacttttcattaaaaacttaccattta 42636373  T
Q  100 aagtccttaa 109  Q
    |||| |||||    
T  42636372 aagtgcttaa 42636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 43419827 - 43419730
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||| |||| |||||||||||||||| || |||  ||| |||||  ||| || | |||| ||||||||||||||||| ||| |||||||||| |||||    
T  43419827 taaaataagaaattattttttaaaaaagttaaatattttaatttgtaatacatttattatacaaattttcataaaaacttaacatttaaagtacttaa 43419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 43841043 - 43841124
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||||||||||| ||||||||| | ||| ||||||||||  |||  | |||||||||||||||| | ||||| ||||    
T  43841043 taaattaagtaattattctttaaaaatattaaatttttcaatttttaatatattgattacacaaatttttacaaaaaattac 43841124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 41106092 - 41105996
Alignment:
Q  13 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||| ||||| |  ||||||| ||||||   |||||||| ||||||| ||| | ||||| ||||| |||||| ||||||||||| ||||||||    
T  41106092 aaattaagaaattaatcattaaaaaagtcaaatagttcaattttcaatgcattgaattcacaatttttcgtaaaaacttaccatttaaggtccttaa 41105996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 42801078 - 42801162
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataa 85  Q
    |||||| || ||||| |||||||||||| |||| ||| | ||||  ||||||||| ||||||| | |||||||| ||||||||||    
T  42801078 tttaagtattctaaaataagtaattattctttacaaaaggcaaatatttcaattttcaatgcattaattacacacattttcataa 42801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 7931765 - 7931812
Alignment:
Q  51 aatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||| ||||| | |||||||||||||||||| |||||||||||||||    
T  7931765 aattttcaatgtattgattacacaaattttcaaaaaaagttaccattt 7931812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 45368808 - 45368729
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    ||||||||| |||||| || |||  ||||||||| | ||||| |||||| ||| |||||||| | |||||||||||||||    
T  45368808 aattattttataaaaaagttaaatatttcaattttcgatgcaatgattatacatattttcatgataagttaccatttaaa 45368729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24103157 - 24103087
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattac 71  Q
    ||||||||| ||||| |||| ||||||||||| |||| ||||||  |||| |||||| ||||| |||||||    
T  24103157 tttaagcattctaaaataagaaattatttttttaaaaggtcaaatgtttcgatttccgatgcaatgattac 24103087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34336579 - 34336477
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || || ||| ||| ||||||| |||||||| ||||||   |||||||||||||||| ||||| || ||| ||| | ||||| |||| ||||||    
T  34336579 tttaaggattcttaataaagaaattattctttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaactttgacaaaaacttactatttaa 34336480  T
Q  101 agt 103  Q
    |||    
T  34336479 agt 34336477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 37813497 - 37813423
Alignment:
Q  13 aaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 86  Q
    ||||| |||||||||| ||||||||| |||||   || |||||||||||||| ||| ||||||| ||||||||||    
T  37813497 aaatttagtaattattcttttaaaaaagtcaaccattacaatttccaatgcattgaatacacaacttttcataaa 37813423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 32133735 - 32133686
Alignment:
Q  67 attacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 116  Q
    |||||||||| ||||||||||| |||| ||||||| |||||||| |||||    
T  32133735 attacacaaactttcataaaaaattactatttaaattccttaaccagtgc 32133686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 44960519 - 44960580
Alignment:
Q  57 caatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 118  Q
    ||||||| |||||||| ||||||||||||||| |||| ||| ||||| |||||  |||||||    
T  44960519 caatgcattgattacataaattttcataaaaatttactattaaaagtgcttaaagagtgccc 44960580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 6270334 - 6270418
Alignment:
Q  17 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||| ||||||||  ||||| |||||||  ||||||||| ||||  | | |||||||||||||| |||||||  |||||||||||    
T  6270334 taagaaattatttcataaaactgtcaaatatttcaattttcaatatattaattacacaaatttttataaaaaaataccatttaaa 6270418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 33285963 - 33285923
Alignment:
Q  69 tacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||| |||||||||||| |||| |||||||||||||||    
T  33285963 tacacaatttttcataaaaatttactatttaaagtccttaa 33285923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33636718 - 33636810
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| |||||   || ||||||||  |||||| ||||||  ||||||||||||||||| | |||||| ||  ||||| ||||||||||    
T  33636718 tttaagcattctaaaaggagaaattatttcataaaaaagtcaaatgtttcaatttccaatgcaataattacaaaatatttcaaaaaaagttac 33636810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 44254203 - 44254131
Alignment:
Q  31 ttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 103  Q
    ||||||| ||||||   |||||||||||||||| ||||| || ||||||| | ||||| |||| |||||||||    
T  44254203 ttaaaaaagtcaaaaacttcaatttccaatgcattgatttcataaattttgacaaaaacttactatttaaagt 44254131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 53261558 - 53261675
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||| ||| |||||||||||| ||||||    
T  53261558 tttaagcatgctaaattaagtaattattctttaaaaatttaaaagttttcaatttccaatgcagtgattacacaaacttttataaaaagttactatttaa 53261657  T
Q  101 agtccttaactagtgccc 118  Q
    |||||||||| |||||||    
T  53261658 agtccttaacgagtgccc 53261675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40252656 - 40252773
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| |||| |||||||||||||| || ||||||||||| |||||||||||||| |||| || ||||||||| || ||||||||||| |||| ||||||    
T  40252656 tttaaacatattaaattaagtaattgttatttaaaaatgttaaagttttcaattttcaatacattgattacac-aactttcataaaaatttactatttaa 40252754  T
Q  101 agtccttaactagtgcccc 119  Q
    |||||||||| ||||||||    
T  40252755 agtccttaaccagtgcccc 40252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 49951796 - 49951717
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaatttt 80  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||    
T  49951796 tttaagcatgctaaattaagtaattattcttttaaaatgtcaaagttttcaattttcaatgcaccgattacacaaatttt 49951717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 53622314 - 53622421
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||||   ||||  |||||||||||||||| ||||||||| |||||||||| ||||||    
T  53622314 taaattaagtaattttttttttaaaatgtcaaaattttcaatttccagctcactttattacacaaattttcagaaaaagttatcatttaaagttcttaac 53622413  T
Q  111 tagtgccc 118  Q
    ||||||||    
T  53622414 tagtgccc 53622421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 45743326 - 45743414
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| |||| || ||||||||||| |||||||||| |||||| ||||||    
T  45743326 taaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatacagtgattacacaacttttcataaagagttactatttaa 45743414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36876163 - 36876064
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| ||||||||||||| |||| ||| ||||||| || |||||||||||||||| || |||||||||||| ||| |||||||||||||| ||||    
T  36876163 tttaagcatgctaaattaagtaactattcttttaaaatgtaaatgttttcaatttccaatacattgattacacaaacttttataaaaagttaccacttaa 36876064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37461578 - 37461460
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcata-aaaagttaccattta 99  Q
    ||||| ||| ||||||||||||||||  |||||||| ||||||||||||||||||  ||||||| ||||||||||| ||||||| |||| ||||||||||    
T  37461578 tttaaacatgctaaattaagtaattaaattttaaaa-tgtcaaagttttcaatttttaatgcaccgattacacaaactttcataaaaaaattaccattta 37461480  T
Q  100 aagtccttaactagtgcccc 119  Q
     | |||||||||| ||||||    
T  37461479 taatccttaactaatgcccc 37461460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 52650796 - 52650697
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| ||| |||||||||| ||||||| |||| |||||||||| |||||||||| |||| |||||||||||||| |||||||||||| |||| ||||||    
T  52650796 tttaaacatgctaaattaagaaattattctttacaaatgtcaaaattttcaattttcaattcactgattacacaatttttcataaaaaattactatttaa 52650697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3179113 - 3179003
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    |||||| || |||||| ||||||||| |||||||||| || ||||||||||||||||||| ||| | |||||||||| |||||||||||||||| |||||    
T  3179113 tttaagtattctaaatcaagtaattaatttttaaaaaagttaaagttttcaatttccaatacactttattacacaaactttcataaaaagttactattta 3179014  T
Q  100 aagtccttaac 110  Q
     |||| |||||    
T  3179013 tagtctttaac 3179003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 38354577 - 38354473
Alignment:
Q  12 taaattaagtaattatttttt-aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||| || ||| ||||||  ||||||||||| ||| ||| |    
T  38354577 taaattaagtaattatttttttaaaaatgtcaaacttttcaatttctaatacactgattacactaactttaataaaagtttaccatttaaggtctttagc 38354478  T
Q  111 tagtg 115  Q
    |||||    
T  38354477 tagtg 38354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 31262916 - 31263014
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||  |||| ||||| |||||||| ||| ||||||||||  |||||||    
T  31262916 tttaagcattctaaattaagtaattatttt-taaaaatgtcaaagttttcgattttgaatgtactgactacacaaacttttataaaaagttgtcatttaa 31263014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 47937863 - 47937962
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||| | |||| ||| || |||||| ||||||||||| ||| |||||||    
T  47937863 tttaaacatactaaattatgtaattattctttaaaaaagtcaaagttttcaattttctatgctctgtttgcacaaactttcataaaaaattatcatttaa 47937962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 49795145 - 49795254
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccattta 99  Q
    |||||||||||||||| |||||||||||||||  |||| | ||| |||||||||| |||||||| ||||||||||| ||| || ||||| |||| |||||    
T  49795145 tttaagcatactaaataaagtaattatttttt-taaatttaaaaattttcaattttcaatgcaccgattacacaaacttttataaaaaaattactattta 49795243  T
Q  100 aagtccttaac 110  Q
    |||||||||||    
T  49795244 aagtccttaac 49795254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 18939967 - 18939846
Alignment:
Q  8 atactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctt 107  Q
    ||||||||||||||||||||| ||||||||  | ||| ||||||||||  |||| | |  || |||||| ||| ||||||||||| | ||||| ||||||    
T  18939967 atactaaattaagtaattattctttaaaaaaattaaaattttcaatttttaatgtatttgttgcacaaacttttataaaaagttatcttttaaggtcctt 18939868  T
Q  108 aactagtgccccatttcccata 129  Q
    |||||||||| |||||||||||    
T  18939867 aactagtgccgcatttcccata 18939846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 23136612 - 23136539
Alignment:
Q  2 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaa 75  Q
    ||||| ||| ||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||    
T  23136612 ttaagtatattaaattaagtaattattcttttaaaatttaaaagttttcaatttccaatgcactgattacacaa 23136539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17970810 - 17970917
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    |||||||||  |||||||||||||||||  || ||||| |||||||||| ||||||||||||||||||||||   || ||| || |||||||||||||||    
T  17970810 tttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattac---aactttaatgaaaagttaccattta 17970906  T
Q  100 aagtccttaac 110  Q
    ||||| |||||    
T  17970907 aagtctttaac 17970917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 41370262 - 41370166
Alignment:
Q  13 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||| |||||||| | ||||| || |||  ||||||||| ||||||| |||||||||||||||||||||||| |||| ||| |||||||||||    
T  41370262 aaattaagaaattatttctcaaaaaagttaaatatttcaattttcaatgcattgattacacaaattttcataaaaacttactattcaaagtccttaa 41370166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4391968 - 4392067
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagt-tttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    |||||| || ||||||| |||||||||| |||||||||||||||   ||||||||| |||| ||||||||||||||||||| ||||||| ||| ||||||    
T  4391968 tttaagtattctaaatttagtaattattctttaaaaatgtcaaaaaatttcaattttcaatacactgattacacaaatttttataaaaatttatcattta 4392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 35153262 - 35153369
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||| | |||||| ||||||||||| |||||||||||||| |||||||| | ||| |||||| ||| |||||||||||| |||||||||| |||      
T  35153262 taaattaaatcattattctttaaaaatgttaaagttttcaattttcaatgcactttattgcacaaacttttataaaaagttactatttaaagtctttatt 35153361  T
Q  111 tagtgccc 118  Q
    ||||||||    
T  35153362 tagtgccc 35153369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 50617507 - 50617606
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||| ||| || |||||| |||| | | ||||||| || |||||||    
T  50617507 taaattaagtaattatttttttaaaatgtcaaacttttcaatttttaatgcactgattgcactaactttcatcaaaattgatcatttaaggttcttaact 50617606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25042836 - 25042743
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||||||| ||||||||||||    || ||||||||||| ||| ||||||||||| |||| |||||||||||||| ||| ||||||||||| |||||    
T  25042836 tttaagcatgctaaattaagta----ttctttaaaaatgttaaaattttcaatttctaatgtactgattacacaaacttttataaaaagttaacattt 25042743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32175433 - 32175550
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattta 99  Q
    |||||||||  |||||||||||||||||   ||||| |||||  ||||||||||| ||||| |||  ||| |||||| ||||| ||||||||| ||||||    
T  32175433 tttaagcattttaaattaagtaattattccataaaagtgtca--gttttcaattttcaatgtactttattgcacaaactttcacaaaaagttatcattta 32175530  T
Q  100 aagtccttaactagtgcccc 119  Q
    ||||| ||||||||||||||    
T  32175531 aagtctttaactagtgcccc 32175550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 20022234 - 20022309
Alignment:
Q  45 gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccca 120  Q
    ||||||||||||||||||| |||||  ||||| ||||||||||| |||| |||||| ||||||||| |||||||||    
T  20022234 gttttcaatttccaatgcattgattgtacaaactttcataaaaaattactatttaaggtccttaaccagtgcccca 20022309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 22889270 - 22889377
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||   |||| | || ||||||||||  ||| ||||||| ||| |||||    
T  22889270 ctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttatcatttaaggtcattaac 22889369  T
Q  111 tagtgccc 118  Q
     |||||||    
T  22889370 gagtgccc 22889377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 22940934 - 22941041
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||   |||| | || ||||||||||  ||| ||||||| ||| |||||    
T  22940934 ctaaattaagtaattgttttttaaaaatgttaaatttttcaattttcaatgcaccagttactctaactttcataaaagtttatcatttaaggtcattaac 22941033  T
Q  111 tagtgccc 118  Q
     |||||||    
T  22941034 gagtgccc 22941041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 49446667 - 49446581
Alignment:
Q  33 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||| ||||||  |||| |||||| ||||| |||||||||| |||||||| | ||||||| |||||||| ||||||||||||||||    
T  49446667 aaaaaagtcaaatatttcgatttccgatgcattgattacacatattttcatgataagttactatttaaaggccttaactagtgcccc 49446581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21687692 - 21687591
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattta 99  Q
    ||||||| | |||| |||||||||  || ||||| ||| ||||||| |||||||| |||||||||  |||||||||| ||| ||||||||||||||||||    
T  21687692 tttaagctttctaagttaagtaatatttctttaataatatcaaagtgttcaattttcaatgcactttattacacaaacttttataaaaagttaccattta 21687593  T
Q  100 aa 101  Q
    ||    
T  21687592 aa 21687591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2063475 - 2063567
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| |||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | |||||||||||||||||||||||||    
T  2063475 tttaagcatgctaaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaaattttcataaaaagttac 2063567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 39767212 - 39767323
Alignment:
Q  6 gcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtc 104  Q
    |||| |||||| ||||||||||||||| |||||   |||||||| ||||||||||||| | |||||||||| ||| || ||||| |||| |||| | |||    
T  39767212 gcatgctaaataaagtaattattttttcaaaattaaaaagtttttaatttccaatgcattaattacacaaacttttataaaaaaattactatttgaggtc 39767311  T
Q  105 cttaactagtgc 116  Q
    |||||| |||||    
T  39767312 cttaaccagtgc 39767323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 44570185 - 44570122
Alignment:
Q  26 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaag 89  Q
    ||||||||||||||| ||| |||| ||||| ||||||| |||||||||||| ||||||||||||    
T  44570185 attttttaaaaatgttaaattttttaattttcaatgcattgattacacaaactttcataaaaag 44570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 49623052 - 49622961
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagtt 91  Q
    |||||||||  |||||||||||||||||   ||||||||||||| ||||||||||| |||  || | |||||||||||||||| ||||||||    
T  49623052 tttaagcattttaaattaagtaattattccataaaaatgtcaaaattttcaatttctaatatactttattacacaaattttcacaaaaagtt 49622961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 8297871 - 8297980
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccattta 99  Q
    ||||||||| | ||||| |||||||||| ||| ||||||||||   || |||||||||||||| | | ||||||| |||||| |||||| |||| |||||    
T  8297871 tttaagcatcccaaatttagtaattattcttttaaaatgtcaactgttacaatttccaatgcattcaatacacaatttttcattaaaaacttactattta 8297970  T
Q  100 aagtccttaa 109  Q
    |||| |||||    
T  8297971 aagtgcttaa 8297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 21241138 - 21241191
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcact 65  Q
    ||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||    
T  21241138 taaattaagaaatgattttttaaaaatatcaaaattttcaatttccaatgcact 21241191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 7996722 - 7996816
Alignment:
Q  11 ctaaattaagtaattatttttta-aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||| ||||||||||||  ||||| | |||||||| |||||||||||     |||||||||| ||||||||||| |||  |||||||||||||||    
T  7996722 ctaaattaaataattattttttttaaaattttaaagtttttaatttccaatg-----attacacaaactttcataaaaaattattatttaaagtccttaa 7996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19597256 - 19597165
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 92  Q
    ||||||||| ||| |||| | ||||||| |||||||||||||||   ||||||||| |||||| ||| |||| ||||||| |||||| ||||    
T  19597256 tttaagcattctacattaggaaattattctttaaaaatgtcaaatagttcaatttctaatgcattgaatacataaatttttataaaatgtta 19597165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 36721660 - 36721589
Alignment:
Q  33 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtc 104  Q
    ||||| ||||||  ||||||||  ||||||| ||||||||||||||| |||||||| |||| ||||||||||    
T  36721660 aaaaaagtcaaatatttcaattctcaatgcattgattacacaaatttccataaaaacttactatttaaagtc 36721589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 49421969 - 49421882
Alignment:
Q  33 aaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    |||||||| ||||||||||||||||||||||| | |||  ||||  ||| |||||  |||  ||||||||||||||||||||||||||    
T  49421969 aaaaatgttaaagttttcaatttccaatgcactttattgtacaagcttttataaatcgttgtcatttaaagtccttaactagtgcccc 49421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39724175 - 39724055
Alignment:
Q  1 tttaagcatactaaattaagtaattatttt--ttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatt 97  Q
    |||||| || ||||||||||||| ||| ||  ||| ||||||||||||||||||||| ||||  || | |||| ||||| ||| ||||||  ||||||||    
T  39724175 tttaagtattctaaattaagtaaatatattagttagaaatgtcaaagttttcaatttacaatatactttattatacaaacttttataaaatattaccatt 39724076  T
Q  98 taaagtccttaactagtgccc 118  Q
    |||||| |||||  |||||||    
T  39724075 taaagttcttaataagtgccc 39724055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12618800 - 12618713
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    ||||||||| | ||||| || ||||||||||| |||| |||||| ||| | |||||| |||||| |||||| |||||||||||||||||    
T  12618800 tttaagcattccaaatttagaaattatttttttaaaaagtcaaatgttataaatttc-aatgcattgattatacaaattttcataaaaa 12618713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 23614626 - 23614729
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||| ||||||||||||||||| || |||| ||||||||| |||| ||| | |||||| ||| ||| ||||||  ||| | ||||||||| ||||    
T  23614626 ctaaattaaataattattttttaaaaacgttaaag-tttcaattttcaatacactttattacataaacttttataaaatattatcgtttaaagtctttaa 23614724  T
Q  110 ctagt 114  Q
    |||||    
T  23614725 ctagt 23614729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 14949069 - 14949006
Alignment:
Q  25 tattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    |||| |||||||| ||||||  || ||| || ||||||| ||||||||||||||||||||||||    
T  14949069 tattctttaaaaaagtcaaatgttacaaatttcaatgcattgattacacaaattttcataaaaa 14949006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 41468142 - 41468201
Alignment:
Q  59 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 118  Q
    ||||| ||||||||   ||||| || |||||||||||||||||| |||||||||||||||    
T  41468142 atgcattgattacatgtatttttatgaaaagttaccatttaaaggccttaactagtgccc 41468201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48097952 - 48098051
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || |||||||||| ||||||| |||||||| || |||   ||||||||||||| || | | ||||||  |||| |||||||||||| ||||||    
T  48097952 tttaagtattctaaattaagaaattattctttaaaaaagttaaatagttcaatttccaatacattaaatacacatgtttttataaaaagttactatttaa 48098051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 1696248 - 1696194
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    ||||||||||| ||||| |||||||| | ||||||| |||||||||| |||||||    
T  1696248 tttcaatttccgatgcattgattacatacattttcaaaaaaagttactatttaaa 1696194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 25115357 - 25115267
Alignment:
Q  13 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 103  Q
    ||||| |||||||||| ||| |||| || ||   || |||||||||||||| ||| ||||||| |||| ||||||| |||| |||||||||    
T  25115357 aaatttagtaattattattttaaaaagttaactattacaatttccaatgcagtgaatacacaactttttataaaaacttactatttaaagt 25115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 38949118 - 38949048
Alignment:
Q  48 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 118  Q
    |||||||||| ||||| ||| | ||||| |||||||||||| |||| |||| ||||||||||  |||||||    
T  38949118 ttcaatttccgatgcattgaatgcacaatttttcataaaaatttactatttcaagtccttaaagagtgccc 38949048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 41956490 - 41956428
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||| ||| ||| ||||||||||| |||||||||||| |||| ||| |||| ||||||    
T  41956490 tttcaattttcaacgcattgattacacaatttttcataaaaatttactattaaaagcccttaa 41956428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 50115068 - 50115145
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    ||||||||| |||||| ||||||| |||| |||||| ||||| |||||||||| ||| | ||||   ||||||||||||||    
T  50115068 aattattttataaaaaagtcaaagatttcgatttcctatgcattgattacacatattatgataa---gttaccatttaaag 50115145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 23016316 - 23016231
Alignment:
Q  13 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    |||||||| ||||||| |||||| | ||||||  ||||||||||||||||| ||| |||| | | ||| ||||||| ||| |||||    
T  23016316 aaattaagaaattattatttaaagaagtcaaacatttcaatttccaatgcattgaatacatagacttttataaaaacttaacattt 23016231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24369407 - 24369476
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 70  Q
    ||||| ||||||||| |||  ||||||| |||| ||| ||||||  ||||||||||||| ||||||||||    
T  24369407 tttaaacatactaaaataaacaattattctttataaaagtcaaacatttcaatttccaaagcactgatta 24369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 31295885 - 31295930
Alignment:
Q  142 tagttagtagttttatggagttaggaaatggtggttaataaactac 187  Q
    ||||| |||||||||||||||||| ||||||||||| | |||||||    
T  31295885 tagttcgtagttttatggagttagaaaatggtggtttagaaactac 31295930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37179691 - 37179760
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 70  Q
    ||||||||||| |||  |||||||||||||||| ||| ||||||  |||| |||||||||| | ||||||    
T  37179691 tttaagcataccaaaacaagtaattattttttagaaaagtcaaacatttcgatttccaatgtattgatta 37179760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 41394078 - 41394013
Alignment:
Q  12 taaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 76  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||| |||||  | ||||||||||    
T  41394078 taaattaagtaattattatttaaaaaaagttaaagttttcaatttctaatgcgttaattacacaaa 41394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 44690369 - 44690284
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 86  Q
    ||||| ||||||||| ||||||||||| ||||||||| || |||  |||| |||| ||||| | | |||||| | |||||||||||    
T  44690369 tttaaacatactaaaataagtaattatcttttaaaaaagttaaatatttcgattttcaatgtaataattacatatattttcataaa 44690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 51105943 - 51106020
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||| |||||||| ||||||  ||| ||||| |||| ||| |||||| || ||||||||||| |||||| |||||    
T  51105943 aattattatttaaaaaagtcaaatattttaattttcaatacacggattacgcatattttcataaatagttactattta 51106020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 7628005 - 7628077
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    |||||||||||||| || || ||||| || |||||| ||||||||||| |||||||  |||||  ||||||||    
T  7628005 tttcaatttccaatacattggttacataacttttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 7628077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 20390050 - 20390138
Alignment:
Q  26 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 114  Q
    ||||| |||||| ||||||  |||  |||| | ||||| |||| |||||| ||||||| | |||||||||||||||  |||||||||||    
T  20390050 attttataaaaaagtcaaatattttgattttcgatgcattgatcacacaacttttcatgataagttaccatttaaaagccttaactagt 20390138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24546814 - 24546722
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    |||||||||  ||||||| | ||||||| ||||||||  ||||    |||||||||||||| | | | |||||||||||||||||||| ||||    
T  24546814 tttaagcatgttaaattaggaaattattctttaaaaaattcaagcagttcaatttccaatgtattaaatacacaaattttcataaaaaattac 24546722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 24753978 - 24754030
Alignment:
Q  51 aatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 103  Q
    ||||||||||||| ||||| || ||| ||||||||||| |||| |||||||||    
T  24753978 aatttccaatgcattgatttcataaactttcataaaaatttactatttaaagt 24754030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40173584 - 40173524
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatg 61  Q
    ||||| ||| |||||||||||||| |||  |||||||||| |||||||| ||||| |||||    
T  40173584 tttaaacattctaaattaagtaatcattcattaaaaatgttaaagtttttaattttcaatg 40173524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 42901983 - 42902027
Alignment:
Q  49 tcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||||| |||  |||||||||| |||||||||||||||||    
T  42901983 tcaatttccaaagcatagattacacaacttttcataaaaagttac 42902027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 44647941 - 44647869
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||||||||| ||||| | |||||||| |||||||| | ||||||| ||| |||| ||||||  ||||||||    
T  44647941 tttcaatttccgatgcattaattacacatattttcatgataagttactattcaaaggccttaatcagtgcccc 44647869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29716871 - 29716752
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||    
T  29716871 tttaagcattctaaattcagcaattatttttttaaaatgtcaaagttttcaatttccaatgcactttattacacaaactttcataaaaggttaccattta 29716772  T
Q  100 aagtccttaactagtgcccc 119  Q
    ||||||||||| ||||||||    
T  29716771 aagtccttaaccagtgcccc 29716752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 10364754 - 10364854
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| || || ||||||||||| |||| |||||| ||||||||||    
T  10364754 taaattaagtaattattctttaaaaatatcaaagttttcaatttacaatgcactgattatacgaactttcataaaaatttactatttaaggtccttaact 10364853  T
Q  112 a 112  Q
    |    
T  10364854 a 10364854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 33619328 - 33619252
Alignment:
Q  131 ttatatatagttagttagtagttttatggagttaggaaatggtggttaataaactacctcttctactatataaatat 207  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33619328 ttatatatgggtagttagtagttttatggagttaggaaatggtggttaagaaactacctcttctactatataaatat 33619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 23344571 - 23344690
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||| | ||||||||||||||  || |||| |||||||||||| ||||||||||||||||| | |||||||||| ||| ||||||||||||||||||    
T  23344571 tttaagctttctaaattaagtaatatttctttacaaatgtcaaagtgttcaatttccaatgcactttattacacaaacttttataaaaagttaccattta 23344670  T
Q  100 aagtccttaactagtgcccc 119  Q
    |||| | |||| ||||||||    
T  23344671 aagtgcataaccagtgcccc 23344690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13445837 - 13445745
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||||| || ||||| || ||||||| ||||||||||| ||||    
T  13445837 tttaagcatgctaaattaagtaagtattctttaaaaatgtgaaagttttcaatttcaaaagcactaatcacacaaactttcataaaaaattac 13445745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5704663 - 5704549
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccattta 99  Q
    ||||| ||| |||||||||||||||||||||| |||||||   |||||||||||| ||||| | |||||||| ||| |||||| ||||| |||  |||||    
T  5704663 tttaaacatgctaaattaagtaattatttttttaaaatgt--tagttttcaattttcaatgtattgattacataaactttcataaaaaaattattattta 5704566  T
Q  100 aagtccttaactagtgc 116  Q
    ||||| ||||| |||||    
T  5704565 aagtctttaacaagtgc 5704549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 21130707 - 21130816
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttc-aatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||| ||| |||||||||| ||||||||||| ||||  ||||| |||| |||| ||| ||| || ||||||||||  |||| |||||| |||||||||    
T  21130707 taaatttagttattatttttttaaaatgtcaaacttttttaattttcaatacactaattgcaccaactttcataaaagtttactatttaaggtccttaac 21130806  T
Q  111 tagtgcccca 120  Q
    ||||||||||    
T  21130807 tagtgcccca 21130816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 34552407 - 34552311
Alignment:
Q  23 attattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcat-aaaaagttaccatttaaagtccttaactagtgccc 118  Q
    |||||| ||||||||| | ||||||||||||||||||||||| | ||||||| || |||||| ||||||||  ||||||||||||||||| |||||||    
T  34552407 attattctttaaaaatattaaagttttcaatttccaatgcactttattacac-aactttcataaaaaagttgtcatttaaagtccttaacgagtgccc 34552311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 10429739 - 10429845
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||| ||||||||||||||||||| |||  || |||||||||| || |||| |||||||| ||| ||||||||||| |||| || |||   ||||||||    
T  10429739 taaatcaagtaattattttttaaaa-tgtttaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatagccttaact 10429837  T
Q  112 agtgcccc 119  Q
    ||||||||    
T  10429838 agtgcccc 10429845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27752646 - 27752759
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaa-tttccaatgcac-tgattacacaaatttt---cataaaaagttacca 95  Q
    ||||| ||| |||||||||||||||||||| || |||||||||||||||||| |||| ||||||| | |||||||||| |||    | |||||||||  |    
T  27752646 tttaaacattctaaattaagtaattattttatacaaatgtcaaagttttcaattttctaatgcactttattacacaaactttaaaaaaaaaaagttatta 27752745  T
Q  96 tttaaagtccttaa 109  Q
    ||||||||||||||    
T  27752746 tttaaagtccttaa 27752759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 34552265 - 34552165
Alignment:
Q  19 agtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 117  Q
    |||||||||| ||||||||| | |||||||||||||| |||||||  | ||||||  || |||||| |||| ||| ||||||||||||||||| ||||||    
T  34552265 agtaattattctttaaaaatattaaagttttcaattttcaatgcattttattaca-taactttcattaaaaattatcatttaaagtccttaaccagtgcc 34552167  T
Q  118 cc 119  Q
    ||    
T  34552166 cc 34552165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 34552609 - 34552494
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattta 99  Q
    |||||||||  || ||| |||||||||| ||||||||| | |||||||| ||||| ||||| |||  | ||||||| ||| ||||||||||| |||||||    
T  34552609 tttaagcattttacatttagtaattattctttaaaaatattaaagtttttaattttcaatgtactttaatacacaacttt-cataaaaagttgccattta 34552511  T
Q  100 aagtccttaactagtgc 116  Q
    |||| |||||| |||||    
T  34552510 aagttcttaacaagtgc 34552494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6586523 - 6586424
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||||||||||| | ||||| | ||| |||| |||| |   |||||||||| ||||| |||  ||| |||||||||||||||||||| ||||||    
T  6586523 tttaagcatactaaattaggaaattaatctttgaaaaagtcagatagttcaatttccgatgcattgaaaacataaattttcataaaaagttactatttaa 6586424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 1479149 - 1479081
Alignment:
Q  50 caatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgccc 118  Q
    |||||| ||||||| ||| ||||||| ||| |||||||| |||||||||||||| |||||  |||||||    
T  1479149 caattttcaatgcattgaatacacaattttacataaaaatttaccatttaaagtgcttaaagagtgccc 1479081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3753201 - 3753103
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaagttaccattt 98  Q
    |||||||||  ||||| ||||||||||| ||| ||||| | |||||||||||||| |||| | | || ||||||||| ||| |||||| ||||| ||||    
T  3753201 tttaagcatgataaataaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatggttacacaaacttttataaaatgttactattt 3753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3769424 - 3769326
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaagttaccattt 98  Q
    |||||||||  ||| | ||||||||||| ||| ||||| | |||||||||||||| |||| | | |||||||||||| ||| |||||| ||||| ||||    
T  3769424 tttaagcatgataattaaagtaattattctttcaaaatttaaaagttttcaattttcaattcaaatgattacacaaacttttataaaatgttactattt 3769326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 6546804 - 6546738
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    ||||||||| || ||| || ||| ||||||||||| |||||| ||||| |||| |||||||||||||    
T  6546804 aattattttatacaaaagttaaatttttcaatttctaatgcattgattgcacatattttcataaaaa 6546738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 7465508 - 7465578
Alignment:
Q  32 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    |||||| ||||||  ||||||||||| ||||| |||||||| ||||||||| ||| ||||| ||| |||||    
T  7465508 taaaaaagtcaaatatttcaatttccgatgcattgattacataaattttcaaaaagagttatcatataaag 7465578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 26187494 - 26187452
Alignment:
Q  67 attacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||    
T  26187494 attacacaaactttcataaaaaattaacatttaaagtccttaa 26187452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26187552 - 26187510
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaa 43  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||    
T  26187552 tttaagcattctaaattaagtaattaatttttaaaaatttcaa 26187510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 31702825 - 31702747
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||| || ||   ||| |||||| |||||| |||||||||| ||||| |||||||||||| ||||||    
T  31702825 aattattttataaaaaagttaagtattttaatttctaatgcattgattacacatatttttataaaaagttactatttaa 31702747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 33618834 - 33618740
Alignment:
Q  209 cattgtatgtgcaaggaaaatatgaagaaattaataatgaaattctagtctttcccccatttctatggagacctattccttctcgaattggaata 303  Q
    ||||||||||| ||| || |||| || |||  |||||||||| | ||||||||  |  |||||||||||||  ||||| ||||||||||||||||    
T  33618834 cattgtatgtgtaagcaagatataaataaagaaataatgaaactttagtctttttcatatttctatggagatatattctttctcgaattggaata 33618740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 354685 - 354576
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||| | || |||| ||| ||||  | |||||||  || ||| ||||||||||||||| | | ||| |||||||||||| ||||||    
T  354685 tttaagcattctaaattatgaaagtattcttttaaaacttaaaagtttctaacttctaatgcactgattacaaagacttttataaaaagttactatttaa 354586  T
Q  101 agtccttaac 110  Q
     | |||||||    
T  354585 ggcccttaac 354576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 22695542 - 22695473
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttca-taaaaagttaccatttaaagtccttaactagtg 115  Q
    ||||||||| | ||||| |||||||||| ||||| | |||||||||||||||||||  ||||||| ||||    
T  22695542 tttcaattttcgatgcattgattacacatatttttaataaaaagttaccatttaaaagccttaacgagtg 22695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27778754 - 27778862
Alignment:
Q  1 tttaagcatactaaattaagtaattatttttta-aaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    |||||| || ||||||| ||||||||||||||  |||| ||||| | ||  ||||| ||||||| | | ||||||  |||||||||||| ||||||||||    
T  27778754 tttaagaatcctaaatttagtaattattttttttaaaaagtcaacgattataattttcaatgcattcaatacacat-ttttcataaaaatttaccattta 27778852  T
Q  100 aagtccttaa 109  Q
    |||| |||||    
T  27778853 aagtgcttaa 27778862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30509316 - 30509424
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||||| ||| |||| ||||||| ||||||||  |||||  |||| |||| ||||||| ||||||||   ||||| ||||| | || | |||||     
T  30509316 tttaagcataccaaaataagcaattattctttaaaaaaatcaaacatttcgattttcaatgcattgattacatgtatttttataaatacttgctatttat 30509415  T
Q  101 agtccttaa 109  Q
    |||||||||    
T  30509416 agtccttaa 30509424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 48551040 - 48551157
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||||||| |||| |    
T  48551040 tttaagcatgctaaattaagaaattattctttaaaaatgtcaaagttttcaattttcaatgcaccgattacacaattttttataaaaagttactatttga 48551139  T
Q  101 agtccttaactagtgccc 118  Q
     |||||||||||||||||    
T  48551140 ggtccttaactagtgccc 48551157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 14146110 - 14146208
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  14146110 ctaaattaagtaattattttttttaaatgtcaaagttttcaatttctaatgcactgattacacaaacttctataaaaatttaccatttaaagtccttaa 14146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3027091 - 3026979
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||||| ||||||||||||||| || ||||||||| |||||| ||||| |||||||||||| | | |||||||| |||||||||||||||| |||||    
T  3027091 tttaagcattctaaattaagtaatttttatttaaaaatatcaaaggtttcattttccaatgcacttcactacacaaactttcataaaaagttactattta 3026992  T
Q  100 aagtccttaacta 112  Q
    |||||||||||||    
T  3026991 aagtccttaacta 3026979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45757929 - 45758037
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||  ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||  ||  ||||||    
T  45757929 tttaagcatgttaaattaagcaattattctttaaaaatgtcaaagttttcaatttacaatgcactgattacacaaactttcataaaaaaatattatttaa 45758028  T
Q  101 agtccttaa 109  Q
     ||||||||    
T  45758029 ggtccttaa 45758037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12140145 - 12140255
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa-ttttcataaaaagttaccattta 99  Q
    ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||| |||||    
T  12140145 tttaagcatgctaaattaaataattattcttttaaaatgtcaaagttttcaatttccaatgtactgattatacaaactttttataaaaagttactattta 12140244  T
Q  100 aagtccttaac 110  Q
    | ||| |||||    
T  12140245 aggtctttaac 12140255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20821303 - 20821412
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccattta 99  Q
    ||||| ||| ||||| |||||||||||| ||||||||| | |||| ||| |||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  20821303 tttaaacattctaaactaagtaattattctttaaaaatattaaaggttttaatttccaatgcactttattacacaaactttcataaaaagttaccattta 20821402  T
Q  100 aagtccttaa 109  Q
    ||||||||||    
T  20821403 aagtccttaa 20821412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 24313551 - 24313670
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaaagttaccattta 99  Q
    ||||| ||| |||||||||  ||||||| |||||||||||||||||||||||||| |||||||  | | |||||||||||||||||||||||| ||||||    
T  24313551 tttaaacattctaaattaaacaattattctttaaaaatgtcaaagttttcaattttcaatgcattttactacacaaattttcataaaaagttatcattta 24313650  T
Q  100 aagtccttaactagtgcccc 119  Q
    ||||| |||||  |||||||    
T  24313651 aagtctttaaccggtgcccc 24313670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 25317808 - 25317923
Alignment:
Q  4 aagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagt 103  Q
    |||||| |||||| ||||||||||| ||| ||||| | ||||||||||||||||||||||  ||||||||||| ||| ||||||| |||| |||||| ||    
T  25317808 aagcatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgcatcgattacacaaacttttataaaaatttactatttaaggt 25317907  T
Q  104 ccttaactagtgcccc 119  Q
    ||||||| ||||||||    
T  25317908 ccttaaccagtgcccc 25317923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 46725657 - 46725776
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    ||||||||| |||||||||||| ||||||| ||||||||| ||| |||||||||| |||||||| | |||||||||||||| | ||||||||   |||||    
T  46725657 tttaagcattctaaattaagtagttattttataaaaatgttaaaattttcaattttcaatgcactttattacacaaattttta-aaaaagttgttattta 46725755  T
Q  100 aagtccttaactagtgcccca 120  Q
    ||||| |||||||||||||||    
T  46725756 aagtcgttaactagtgcccca 46725776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 33072181 - 33072108
Alignment:
Q  37 atgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    ||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||| | |||||||||    
T  33072181 atgtcaaagttttcaatttccaatgcattaattacacaaatttttataaaaaattaccatttcaggtccttaac 33072108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 37388418 - 37388494
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    ||||||||||||||||| ||||||||||| ||| |||||| ||| ||||||| |||||||||||||||| |||||||    
T  37388418 taaattaagtaattattctttaaaaatgtgaaatttttcagttttcaatgcattgattacacaaatttttataaaaa 37388494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 1511367 - 1511453
Alignment:
Q  33 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||||||||||| ||||||||||||||||| ||||||||  |||||||| ||||||||||| |||||||  |||||  ||||||||    
T  1511367 aaaaatgtcaaagatttcaatttccaatgcattgattacattaattttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 1511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29612020 - 29612106
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaa 86  Q
    ||||| ||| ||||| |||||||||||| ||||||||||| | ||||||||||||||||||||| | |||||||||| |||||||||    
T  29612020 tttaaacattctaaaataagtaattattctttaaaaatgtgacagttttcaatttccaatgcactttattacacaaactttcataaa 29612106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 54911201 - 54911293
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||| ||| ||||||||| |||||||| ||| ||||||| |||||||| ||||| |||| || |||||||| ||| ||||||||||||||||    
T  54911201 tttaaacattctaaattaaataattattcttttaaaatgttaaagttttaaattttcaatacattgattacataaactttcataaaaagttac 54911293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 40614356 - 40614263
Alignment:
Q  17 taagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||| | |||||||||| |||| | |||| ||| |||||||||| ||||||    
T  40614356 taagtaattattctttaaaaatgtcaatgttttcaattttcaatgcactttattacacaaactttcttgaaaattta-catttaaagttcttaac 40614263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 18399239 - 18399147
Alignment:
Q  27 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    |||| |||||| ||||||  |||| |||||| ||||| ||||||||||| ||||||| | |||||||||||||||  ||||||||| ||||||    
T  18399239 ttttataaaaaagtcaaatatttcgatttccgatgcattgattacacaacttttcatgataagttaccatttaaaagccttaactaatgcccc 18399147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 1829330 - 1829243
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||||||||||| |||||   || ||||| ||||| ||||| |||||||||||||  ||||||||||||||| || |||||||    
T  1829330 aattattttttaaaaatatcaaatagtttaattttcaatgtactgaatacacaaattttcgcaaaaagttaccattttaaatccttaa 1829243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 22772872 - 22772979
Alignment:
Q  13 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgc-actgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||||||   ||| ||| ||||||||||||||||||||||| | | |||  ||||| ||||| |||||||||  ||||||||||||||||     
T  22772872 aaattaagtaattattccataacaatttcaaagttttcaatttccaatgcaatttattctacaaactttcacaaaaagttaatatttaaagtccttaacg 22772971  T
Q  112 agtgcccc 119  Q
    ||| ||||    
T  22772972 agtacccc 22772979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28692030 - 28691955
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 76  Q
    ||||| |||| ||||||||||||||||| ||| ||||||| ||||||||||||||| ||| || | ||||||||||    
T  28692030 tttaaacatattaaattaagtaattattcttttaaaatgttaaagttttcaatttctaatacaataattacacaaa 28691955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 9342757 - 9342672
Alignment:
Q  3 taagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca-ctgattacacaaattttcataaaa 87  Q
    ||||||| ||| ||||| ||||||||  |||||||||| |||||||||||||| |||||||  | |||||||||||||| ||||||    
T  9342757 taagcattctagattaaataattattcattaaaaatgttaaagttttcaattttcaatgcattttattacacaaatttttataaaa 9342672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 53040469 - 53040558
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagt 90  Q
    |||||| || |||||||||| ||||||| ||||||||  |||||   |||||||||||||| | ||| |||||||| |||||||||||||    
T  53040469 tttaaggattctaaattaagaaattattatttaaaaaattcaaatacttcaatttccaatgtattgaatacacaaactttcataaaaagt 53040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 39651994 - 39652034
Alignment:
Q  78 tttcataaaaagttaccatttaaagtccttaactagtgccc 118  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  39651994 tttcataaaaagttaccatttaaagtccttaactaatgccc 39652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 45584432 - 45584343
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 92  Q
    |||||||||  ||||||||||||||||| ||| ||||| |  ||||||| ||||| ||||  | |||||||||||| |||||||||||||||    
T  45584432 tttaagcatgttaaattaagtaattattcttttaaaatat--aagtttttaattttcaatatattgattacacaaactttcataaaaagtta 45584343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 25548258 - 25548203
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    |||||||||| |||||| |||||||||| ||||||||||||| ||| |||||||||    
T  25548258 tttcaatttctaatgcattgattacacatattttcataaaaatttatcatttaaag 25548203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 48322312 - 48322241
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 72  Q
    ||||||||| ||||| |||||||||||||||| |||| ||||||  |||| ||||||||| || ||||||||    
T  48322312 tttaagcattctaaaataagtaattatttttttaaaaagtcaaatgtttcgatttccaatacattgattaca 48322241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50644134 - 50644189
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttc 56  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||| |||| ||||||    
T  50644134 tttaagtatattaaattaagtagttattttttaaaaatgtcaaattttttaatttc 50644189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 52340188 - 52340118
Alignment:
Q  40 tcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||| |||| |||||| ||||| |||||||||| ||||| || | |||||||||||||||| |||||||    
T  52340188 tcaaagatttcgatttccgatgcattgattacacatatttttatgataagttaccatttaaaggccttaac 52340118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 37359467 - 37359570
Alignment:
Q  2 ttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaa--ttttcataaaaagttaccattt 98  Q
    ||||||||  |||||||||||||||||   ||||||||| |||||||||||||| |||| ||| | ||||||||||  || ||| ||||| |||||||||    
T  37359467 ttaagcattttaaattaagtaattattccataaaaatgttaaagttttcaattttcaattcactttattacacaaactttatca-aaaaaattaccattt 37359565  T
Q  99 aaagt 103  Q
    |||||    
T  37359566 aaagt 37359570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 40546345 - 40546398
Alignment:
Q  19 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 72  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||| ||||||||    
T  40546345 agtaattattttttaaaaaagtcaaatatttcgatttccaatgcattgattaca 40546398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 49168741 - 49168849
Alignment:
Q  1 tttaagcatactaaattaagtaattatt-ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    ||||| ||| ||||||| | |||||||| ||||||||||| | || ||||||||||| || | | |||||||||||| ||||||||||| ||  ||||||    
T  49168741 tttaaacatgctaaatttactaattattcttttaaaaatggctaaattttcaatttctaaagtattgattacacaaactttcataaaaa-ttttcattta 49168839  T
Q  100 aagtccttaa 109  Q
    | ||||||||    
T  49168840 aggtccttaa 49168849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 19898187 - 19898107
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    ||||||||| || |||  |||||  ||||||||| ||||||| |||||||||| ||||||||||||| |||| || |||||    
T  19898187 aattattttatataaaaatcaaatatttcaattttcaatgcattgattacacatattttcataaaaatttacaatgtaaag 19898107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 54912058 - 54911986
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||||||||  ||||| |||||||||| |||||||| | |||||  |||||| || ||||||||||||||||    
T  54912058 tttcaatttcggatgcattgattacacatattttcatgataagttgtcatttataggccttaactagtgcccc 54911986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 2831559 - 2831634
Alignment:
Q  13 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    |||| ||| ||||||||||||| || ||||||  |||||||||  |||||| |||||| |||| ||||||||||||    
T  2831559 aaatcaagaaattattttttaataaagtcaaatatttcaattttaaatgcaatgattatacaagttttcataaaaa 2831634  T

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Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 25062034 - 25061987
Alignment:
Q  23 attattttttaaaaatgtcaaagttttcaatttccaatgcactgatta 70  Q
    |||||| ||||||||||| ||| |||||||||| ||||||||||||||    
T  25062034 attattctttaaaaatgttaaaattttcaattttcaatgcactgatta 25061987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37708437 - 37708508
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 72  Q
    |||||||||| |||| |||| ||||| | |||||||| || |||  ||||||||| ||||||||||||||||    
T  37708437 tttaagcatattaaaataagcaattagtctttaaaaaagttaaacatttcaattttcaatgcactgattaca 37708508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38009033 - 38009128
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaag-ttttcaatttccaatgcactgattacacaaattttcataaaaagttacca 95  Q
    ||||||||| ||||||| || |||||||  |||| || ||||||  |||||||||| ||||| | | || ||||||||||||||||||| ||||||    
T  38009033 tttaagcattctaaattgagaaattattccttaagaaagtcaaacattttcaattttcaatggattaatcacacaaattttcataaaaacttacca 38009128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 12908913 - 12908860
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcact 65  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||  ||||||||    
T  12908913 taaataaagtaattattttttaaaaaaatcaaaattttcaatttttaatgcact 12908860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 27968262 - 27968307
Alignment:
Q  65 tgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||||| |||||||| | |||||||||||||||| |||||||    
T  27968262 tgattacacatattttcatgataagttaccatttaaaggccttaac 27968307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 34758946 - 34759047
Alignment:
Q  18 aagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 117  Q
    ||||||||||||| |||||| || |||  |||| | | |  ||||| |||||||| | |||| ||| | ||||||| |||||||| ||||||||||||||    
T  34758946 aagtaattattttataaaaaagtgaaatatttcgactcctgatgcattgattacatatatttccatgataagttactatttaaagcccttaactagtgcc 34759045  T
Q  118 cc 119  Q
    ||    
T  34759046 cc 34759047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 41750832 - 41750755
Alignment:
Q  27 ttttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtc 104  Q
    |||||||| ||||||||| |||| ||||| ||||||| |||||| || || ||| || | || |||||||||||||||    
T  41750832 ttttttaataatgtcaaactttttaatttacaatgcattgattatactaagttttatcacaacttaccatttaaagtc 41750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 43803992 - 43804061
Alignment:
Q  24 ttattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| |||||||||||||||||    
T  43803992 ttattctttaaaaaagtcaaacaattcaatttccaatgtattaaatacacaagttttcataaaaagttac 43804061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23554779 - 23554672
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || || ||| ||| |||||||||||||||| |||||||||| | |||||||||||| | | ||||| || | ||||||||  || |||||| |    
T  23554779 tttaaggattcttaataaagaaattattttttaaaaa-gtcaaagtttacgatttccaatgcaataaatacacgaactatcataaaatctttccatttta 23554681  T
Q  101 agtccttaa 109  Q
    ||| |||||    
T  23554680 agttcttaa 23554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 40690235 - 40690287
Alignment:
Q  48 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||| |||| || ||| ||||||| ||||||||||||| ||||||||||    
T  40690235 ttcaattttcaatacattgaatacacaagttttcataaaaagctaccatttaa 40690287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 46547858 - 46547794
Alignment:
Q  29 ttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| ||||||   |||||||||||||||| ||| |||| || |||||||||||| ||||    
T  46547858 ttttaaaaaagtcaaataattcaatttccaatgcattgaatacataatttttcataaaaaattac 46547794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 46712009 - 46711949
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 72  Q
    |||| |||||||||||| |||||||| ||||||  |||  |||||||||||| ||||||||    
T  46712009 taaaataagtaattattctttaaaaaagtcaaacattttgatttccaatgcattgattaca 46711949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 53195445 - 53195497
Alignment:
Q  200 ataaatatgcattgtatgtgcaaggaaaatatgaagaaattaataatgaaatt 252  Q
    ||||||||| ||||||||||| || || |||||||||||  ||||||||||||    
T  53195445 ataaatatgtattgtatgtgccagcaagatatgaagaaagaaataatgaaatt 53195497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 53766777 - 53766702
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    |||||||||||||||| || ||||  |||||||| ||||||| | | |||||||| ||||||||||  |||||||||    
T  53766777 aattattttttaaaaaagtaaaag-cttcaattttcaatgcaataaatacacaaactttcataaaatattaccattt 53766702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 54290883 - 54290795
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaag 89  Q
    |||||||||  ||||||| | | ||||| |||||||| ||||||   |||||||||||||| | | | ||||||| |||||||||||||    
T  54290883 tttaagcatgataaattaggaagttattctttaaaaaagtcaaacagttcaatttccaatgtattaaatacacaagttttcataaaaag 54290795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14309193 - 14309071
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcata-aaaagtta--ccatt 97  Q
    |||||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |||| |||  |||||    
T  14309193 tttaagcatattaaattaagtagttattctttaaaaatatcaaagttttcaatttccaatgcattaattacacaaattttcataaaaaaattactccatt 14309094  T
Q  98 taaagtccttaactagtgcccca 120  Q
    ||| |||||||||||||||||||    
T  14309093 taaggtccttaactagtgcccca 14309071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38595037 - 38594923
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| || |||||||||||||||||| ||| ||||||||||| |||||||||||||||||| | |||| | ||||||||||||||| ||| |||||||    
T  38595037 tttaagtatgctaaattaagtaattattcttttaaaatgtcaaaattttcaatttccaatgcattaattatataaattttcataaaaatttatcatttaa 38594938  T
Q  101 agtccttaactagtg 115  Q
    |||||||||| ||||    
T  38594937 agtccttaaccagtg 38594923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 26453735 - 26453630
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||| ||||||  ||||||||||| |||||||| |    
T  26453735 taaattaagtaat-attttttaaaaatgtcaaacttttcaattttcaatgcgctggttacacaaatttttataaaagtttaccatttaaggtccttaatt 26453637  T
Q  112 agtgccc 118  Q
    |||||||    
T  26453636 agtgccc 26453630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 16636742 - 16636656
Alignment:
Q  28 tttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 114  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  16636742 tttttaaaaatatcaaagttgtcaattttcaatgcactaattacacaaacttttataaaaagttaccatttaaggtccttaactagt 16636656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17774388 - 17774272
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccattta 99  Q
    |||||||||  ||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||| | |||||||||| ||||||||||||||| ||||||    
T  17774388 tttaagcattttaaatcaagtaattattctttaaaaatatcaaatttttcaatttccaatacactttattacacaaa-tttcataaaaagttatcattta 17774290  T
Q  100 aagtccttaactagtgcc 117  Q
    ||||| ||||| ||||||    
T  17774289 aagtcattaaccagtgcc 17774272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 22601786 - 22601890
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||| ||||  |||||||| ||||||||| ||||||| ||| ||||||| ||| ||||||    
T  22601786 taaattaagtaattattttttaaaaatatcaaaatttttaattttcaataaactgattatacaaatttttataaaaatttatcatttaaggtctttaact 22601885  T
Q  112 agtgc 116  Q
    |||||    
T  22601886 agtgc 22601890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 26432262 - 26432378
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||  ||||||||||||||||||||| |||||   ||| |||||||||||||||| ||||||||||| || ||||||||||| ||||||||| |    
T  26432262 tttaagcattttaaattaagtaattatttttttaaaataataaacttttcaatttccaatgtactgattacactaactttcataaaaatttaccatttta 26432361  T
Q  101 agtccttaactagtgcc 117  Q
     || |||||||| ||||    
T  26432362 ggttcttaactaatgcc 26432378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 27325917 - 27325814
Alignment:
Q  14 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 113  Q
    ||||| ||||||||| ||||||||||||||| |||||||||| |||||||||| |||||  ||||||  |||||| ||| ||||||| ||||||||||||    
T  27325917 aattaggtaattattctttaaaaatgtcaaacttttcaattttcaatgcactggttacattaatttttgtaaaaatttatcatttaaggtccttaactag 27325818  T
Q  114 tgcc 117  Q
    ||||    
T  27325817 tgcc 27325814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12221437 - 12221523
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 87  Q
    ||||| |||||||||||||||| ||||| ||||||| |||||||||||| ||||| ||||| |||||||||| |||||||| |||||    
T  12221437 tttaaacatactaaattaagtagttattctttaaaattgtcaaagtttttaattttcaatgtactgattacataaattttcgtaaaa 12221523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 21259513 - 21259415
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    ||||||||  ||||||| |||||| |||||||| |||| ||||| |||||||||||||||||||| || |||||||||||| ||||||| ||| |||||    
T  21259513 taaattaaaaaattattctttaaagatgtcaaaatttttaattttcaatgcactgattacacaaacttccataaaaagttatcatttaaggtctttaac 21259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41568773 - 41568708
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactg 66  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||    
T  41568773 tttaagcatactaaattaagttattattcttcaaaaatgtcaaagttttcaattttcaatgcactg 41568708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4695072 - 4695164
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| |||||||||  ||||||| ||||||||| | |||||||| |||||||||||||||||||| ||||| || |||||||| ||||    
T  4695072 tttaagcatgctaaattaaaaaattattctttaaaaatattaaagtttttaatttccaatgcactgattatacaaacttccataaaaaattac 4695164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 29829601 - 29829704
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||| ||||||||||||||||||||||| | |||||| |||||||| ||||||||| |||||  |||||||||| | || |||| | ||| ||||||    
T  29829601 taaattatgtaattattttttaaaaatgtcacacttttcagtttccaattcactgattatacaaacattcataaaaattaactatttgaggtctttaact 29829700  T
Q  112 agtg 115  Q
    ||||    
T  29829701 agtg 29829704  T

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Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 3263772 - 3263862
Alignment:
Q  26 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 116  Q
    ||||| |||||| ||||||| |||| |||||| ||||| |||||||||| ||||| || | |||||||||||||||| |||||||||||||    
T  3263772 attttataaaaaagtcaaagatttcgatttccgatgcattgattacacatattttaatgataagttaccatttaaagaccttaactagtgc 3263862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 27794944 - 27794854
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 112  Q
    ||||||| ||| ||||| ||||| ||||||||||| |||||  |||||| ||||| ||| ||||||| |||||||||||||||||||||||    
T  27794944 aattattgttttaaaatatcaaaattttcaatttcaaatgcgatgattatacaaacttttataaaaaattaccatttaaagtccttaacta 27794854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 10228319 - 10228426
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||| | ||||||||||| ||| ||||| | |||||||||||||||| |||||||| ||||||||| |||  ||||||||||| ||||||    
T  10228319 tttaagcatgctaa-taaagtaattattctttcaaaatttaaaagttttcaatttccgatgcactggttacacaaacttttttaaaaagttactatttaa 10228417  T
Q  101 agtccttaa 109  Q
     ||| ||||    
T  10228418 tgtctttaa 10228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 26686747 - 26686667
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 92  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||  ||||||||||| |||||||||||||||    
T  26686747 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagtta 26686667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 26956478 - 26956398
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 92  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||| |||| ||  ||||||||||| |||||||||||||||    
T  26956478 taaattaagtaagtattctttaaaaatgtaaaagtttttaattttcaatacatcgattacacaaactttcataaaaagtta 26956398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 10410460 - 10410567
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||||||||| | |||  ||||| ||| |||||||||||| ||||||| | |||||    
T  10410460 ctaaattaagtaatatttttttaaaaatgtcagaatattcaatttccaatgcactttatttaacaaacttttataaaaagttacaatttaaaatgcttaa 10410559  T
Q  110 ctagtgcc 117  Q
    | ||||||    
T  10410560 ccagtgcc 10410567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36609237 - 36609150
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    ||||| ||| ||||||||| |||||||| || |||||| |||||||||||||||| ||||| ||| |||||||||| ||| |||||||    
T  36609237 tttaaacattctaaattaaataattattcttcaaaaatatcaaagttttcaattttcaatgtactaattacacaaacttttataaaaa 36609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 5356404 - 5356286
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||| |||| ||| |||| ||||| ||| |||||| ||||||  |||| |||| | ||||| |||||||||| |||||||| | ||||||||||||||    
T  5356404 tttaaggataccaaaataagaaattaatttataaaaacgtcaaatatttcgattttcgatgcattgattacacatattttcatgataagttaccatttaa 5356305  T
Q  101 agtccttaactagtgcccc 119  Q
    || ||||||| ||| ||||    
T  5356304 agaccttaaccagtacccc 5356286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5758562 - 5758680
Alignment:
Q  1 tttaagcatactaaattaa--gtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||||||| |||||||||  |||| |||| |||||||| |  |||  |||||||| |||||  ||||| |||||||| ||||||||||| |||||||||    
T  5758562 tttaagcattctaaattaaaagtaactattctttaaaaaagcgaaacatttcaattcccaat--actgaatacacaaactttcataaaaacttaccattt 5758659  T
Q  99 aaagtccttaactagtgcccc 119  Q
    |||||||||||  ||||||||    
T  5758660 aaagtccttaaaaagtgcccc 5758680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 8247092 - 8247180
Alignment:
Q  26 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagt 114  Q
    ||||| |||||| ||||||  |||| |||||| ||||| |||||| |||| ||||||| | |||||||||||||||| |||||||||||    
T  8247092 attttataaaaaagtcaaatatttcgatttccgatgcattgattatacaacttttcatgataagttaccatttaaagaccttaactagt 8247180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 43000760 - 43000868
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaa-gttaccatttaaagtccttaa 109  Q
    ||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||| |  | | ||||| ||||||||||| || || ||||||||| |||||    
T  43000760 taaataaagtaattattctttaaaaatgtcaaaatttttaattttcaatgcactttgtcaaacaaactttcataaaaaggtaacaatttaaagtacttaa 43000859  T
Q  110 ctagtgccc 118  Q
    |||||||||    
T  43000860 ctagtgccc 43000868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 28639570 - 28639669
Alignment:
Q  19 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcc 117  Q
    |||||||||| ||||||||||| ||||||||||  ||||||||||| | |||||||||| ||| ||||||| ||   |||||||||||||| | ||||||    
T  28639570 agtaattattctttaaaaatgttaaagttttcagcttccaatgcactttattacacaaacttttataaaaaattgttatttaaagtccttatccagtgcc 28639669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 10051755 - 10051845
Alignment:
Q  26 attttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 116  Q
    ||||| |||||| ||||||  |||  |||||| ||||| |||||| |||| ||||||||| ||||||||||||||||  ||||||||||||    
T  10051755 attttataaaaaagtcaaatatttatatttccgatgcattgattatacaacttttcataataagttaccatttaaaggtcttaactagtgc 10051845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 31672444 - 31672530
Alignment:
Q  33 aaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||| ||||||  ||||||||||||||||| |||||||| ||| ||||| ||||||||||| |||||||  |||||  ||||||||    
T  31672444 aaaaaagtcaaatgtttcaatttccaatgcattgattacaaaaaatttcaaaaaaagttaccttttaaaggtcttaaagagtgcccc 31672530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26663635 - 26663708
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 74  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||  |||| |||||||||| | ||||||||||    
T  26663635 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacaca 26663708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26935230 - 26935303
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacaca 74  Q
    ||||||||| ||||| |||| |||||||||||||||| ||||||  |||| |||||||||| | ||||||||||    
T  26935230 tttaagcattctaaaataagaaattattttttaaaaaagtcaaatatttcgatttccaatgtattgattacaca 26935303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 39177691 - 39177768
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    |||||| ||||||||||  ||| ||||| | ||||||||||||||||||| |||||||| ||||| |||| |||||||    
T  39177691 ctaaataaagtaattatcctttcaaaatttaaaagttttcaatttccaatacactgattgcacaactttttataaaaa 39177768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 22473493 - 22473553
Alignment:
Q  59 atgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgcccc 119  Q
    ||||| |||||||||| |||||||  | |||||||||||||||| ||||||||||||||||    
T  22473493 atgcattgattacacatattttcacgataagttaccatttaaagcccttaactagtgcccc 22473553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31914170 - 31914277
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||  ||| |||||    |||| ||| ||||| || ||||||||| | |||||||||||    
T  31914170 tttaagcattctaaattaagtaattattctttaaaaa-gtcaaacattttaattttttgtgcattgaatacaccaaatttcataaagatttaccatttaa 31914268  T
Q  101 agtccttaa 109  Q
    | |||||||    
T  31914269 aatccttaa 31914277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 31889662 - 31889708
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    |||||||||| |||||| |||||||||| ||||||||||||||||||    
T  31889662 tttcaatttctaatgcattgattacacatattttcataaaaagttac 31889708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 967102 - 967194
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||||| |||||| |  |||||| ||||||||  |||||   |||||||||||||||| ||| ||||  ||||||||| |||||||||    
T  967102 tttaagcataccaaattaggatattattctttaaaaaattcaaatagttcaatttccaatgcattgaatacatgaattttcatgaaaagttac 967194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 14475085 - 14475009
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||||| | |||||||||||||  ||||||||||  ||||  |||||||| ||||||||| |||||||||| ||||    
T  14475085 aattattctataaaaatgtcaaatatttcaatttcagatgctttgattacataaattttcaaaaaaagttactattt 14475009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 14042484 - 14042571
Alignment:
Q  22 aattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||| |||||||| ||||||  |||  |||||||||||| |||||| ||||||||| || |||| ||  ||||||||||| ||||    
T  14042484 aattattatttaaaaaagtcaaatattttgatttccaatgcattgattatacaaatttttattaaaatttgtcatttaaagtctttaa 14042571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30104804 - 30104907
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccattta 99  Q
    ||||||||| | ||||| ||||| |||||||| |||| |||||   || |||||||||||||| | | ||||||| |||||| |||||| |||||| |||    
T  30104804 tttaagcatcccaaatttagtaactatttttttaaaaagtcaacaattacaatttccaatgcattcaatacacaacttttcattaaaaacttaccactta 30104903  T
Q  100 aagt 103  Q
    ||||    
T  30104904 aagt 30104907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 30501246 - 30501127
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccattta 99  Q
    ||||||||| | ||||| |||||||||| ||| |||| |||||   || ||||||||||| || | | ||||||| |||||| | |||| |||| |||||    
T  30501246 tttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaacttactattta 30501147  T
Q  100 aagtccttaactagtgcccc 119  Q
    |||| |||||| ||||||||    
T  30501146 aagtgcttaacaagtgcccc 30501127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 30541589 - 30541470
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca-taaaaagttaccattta 99  Q
    ||||||||| | ||||| |||||||||| ||| |||| |||||   || ||||||||||| || | | ||||||| |||||| | |||| |||| |||||    
T  30541589 tttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaacttttcatttaaaacttactattta 30541490  T
Q  100 aagtccttaactagtgcccc 119  Q
    |||| |||||| ||||||||    
T  30541489 aagtgcttaacaagtgcccc 30541470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 34032196 - 34032125
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattaca 72  Q
    ||||||||| ||||| |||||||||||| |||||||| || |||  |||||||||| || ||| ||||||||    
T  34032196 tttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaatttcaaaggcaatgattaca 34032125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 28207778 - 28207696
Alignment:
Q  34 aaaatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagtg 115  Q
    |||||||||||||||| ||| || ||||||||  ||| |||||| ||||||||| | || | ||||||||| |||||||||||    
T  28207778 aaaatgtcaaagtttttaatatcaaatgcactttattgcacaaactttcataaacatttgctatttaaagttcttaactagtg 28207696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 779104 - 779192
Alignment:
Q  19 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtcctta 108  Q
    ||||||||||||||||||| || |||  |||| |||||||||||| ||||||||||  ||||| |||| |  ||| ||||| ||||||||    
T  779104 agtaattattttttaaaaa-gttaaatgtttcgatttccaatgcattgattacacactttttcgtaaatacatactatttatagtcctta 779192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 20125713 - 20125652
Alignment:
Q  48 ttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||| | ||||||| | | ||||| |||||||||||| |||| |||||||||||||||    
T  20125713 ttcaattttcgatgcactaaatgcacaatttttcataaaaatttactatttaaagtccttaa 20125652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25437981 - 25437888
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaat-gtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| |||||||||| | ||||| ||||||||  || |||   |||||||||||||| | | | ||||||| |||||||||||||||||    
T  25437981 tttaagcatgctaaattaagaagttattctttaaaaaaagtgaaacagttcaatttccaatgtattaaatacacaagttttcataaaaagttac 25437888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9740932 - 9740968
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaa 37  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  9740932 tttaaacattctaaattaagtaattattttttaaaaa 9740968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 12848578 - 12848467
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||  |||||||    
T  12848578 tttaagcatattaaattaagtaactattctttaataatgtcaaagttttcaatttccattgcactaattacacaaactttcataaaaagttgtcatttaa 12848479  T
Q  101 agtccttaacta 112  Q
     |||||||||||    
T  12848478 ggtccttaacta 12848467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24389729 - 24389632
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  24389729 tttaagcatgctaaattaagtaattattcttttaagatgtcaaagttttcaatttccaatgcgctgattacacaaactttcataagaagttaccattt 24389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 33068639 - 33068540
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||  ||||  |||||||||    
T  33068639 ctaaattaagtaattattttttaaaaatgtgaaagttttcaatttctaatgcactgattatacaaactttcataaaaagttactttttatggtccttaac 33068540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33454968 - 33455067
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||| |||||||||| || |||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||| ||||||    
T  33454968 tttaagcatgctaaattaagaaactattctttaaaaatgtcaaagttttcaatttacaatacattgattacacaacttttcataaaaagttactatttaa 33455067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 431726 - 431621
Alignment:
Q  15 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaactag 113  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||| ||||| |     
T  431726 attaagtaattattctttaaaaatgttaaaattttcaatttccaatgcacttttttacacaaactttcataaaaagttaccatttaaagtctttaaccaa 431627  T
Q  114 tgcccc 119  Q
    ||||||    
T  431626 tgcccc 431621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 12205530 - 12205620
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||||||||||||||||||||| |||| ||||||||||| |||| |||||||| | |||||||||||||||| ||||||||||||||||||    
T  12205530 taaattaagtaattattttttataaatatcaaagttttccatttgcaatgcacattattacacaaattttcaaaaaaagttaccatttaaa 12205620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6084008 - 6083911
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccattt 98  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| |||||  ||||||||||||| ||| ||||||||||| |||||    
T  6084008 tttaagcatactaaatttagtaattattattttaaaatatcaaagttttcaattttcaatgtgctgattacacaaacttttataaaaagttatcattt 6083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 8964392 - 8964477
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 86  Q
    ||||||||| |||||||||||||||||| |||||||| || |||  ||||||||||||||||| ||||||||||||||||||||||    
T  8964392 tttaagcattctaaattaagtaattattctttaaaaaagtaaaatatttcaatttccaatgcattgattacacaaattttcataaa 8964477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 30523014 - 30523111
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||| ||||| || ||||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||| || |||||    
T  30523014 taaattaaataatttttctttaacaatgtcaaagttttcaatttccaatgtactaattacacaaactttcataaaaagttaccatctaaggtacttaa 30523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6334778 - 6334678
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||  |||||||||| |||||||    
T  6334778 tttaaacatgctaaattaaaaaattattttttaaaaatgtcaaagttttcaatttccaatgcattgattatataaacttttgtaaaaagttatcatttaa 6334679  T
Q  101 a 101  Q
    |    
T  6334678 a 6334678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 565800 - 565706
Alignment:
Q  1 tttaagcatactaaattaagtaat--tattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| |||||||||||||   |||| ||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  565800 tttaagcatgctaaattaagtaaaagtattctttaaaaatgtgaaagttttcaatttcctatgcactaattacacaaactttcataaaaagttac 565706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 42342581 - 42342487
Alignment:
Q  15 attaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    ||||| |||||||| ||||||||||||||| ||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  42342581 attaaataattattctttaaaaatgtcaaaattttcaatttt-aatacactgattaaacaaattttcataaaaagttaccatttaatatccttaac 42342487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6411480 - 6411367
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| ||| |||||| ||||||||||| ||| ||||| | |||||||||||||||||||| |||||||||||| | ||| |||||||||||  ||||||    
T  6411480 tttaaacatgctaaataaagtaattattcttttaaaatttaaaagttttcaatttccaatgtactgattacacatacttttataaaaagttattatttaa 6411381  T
Q  101 agtccttaactagt 114  Q
     || ||||||||||    
T  6411380 ggttcttaactagt 6411367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 32066740 - 32066833
Alignment:
Q  19 agtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaacta 112  Q
    ||||||||||||||  ||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||  |||||| |||||||||||    
T  32066740 agtaattattttttttaaatgtcaaagtttttaatttctaatgtactaattacacaaactttcataaaaagttataatttaaggtccttaacta 32066833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 33634893 - 33634796
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||| ||||||||  || ||||| | |||||||||||||||||||| ||||||| ||||| |||| |||||||||||| |||||||||||||||    
T  33634893 taaattaaataattattcgtttaaaatatgaaagttttcaatttccaatgtactgattgcacaactttttataaaaagttactatttaaagtccttaa 33634796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9049256 - 9049148
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||  ||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||| | |||||||||||||| |||||||||||  ||||||    
T  9049256 tttaagcatgttaaattaagtaattattcttttaaaatgttaaatttttcaattttcaatgcattaattacacaaatttttataaaaagttattatttaa 9049157  T
Q  101 agtccttaa 109  Q
     || |||||    
T  9049156 ggttcttaa 9049148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3074080 - 3074187
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttaccattta 99  Q
    |||||||||  |||||||||||||||||  || ||||| |||||||||| ||||||||||||||||||||||   || ||| || |||||||||||||||    
T  3074080 tttaagcatgataaattaagtaattattcatttaaaatatcaaagtttttcaatttccaatgcactgattac---aactttaatgaaaagttaccattta 3074176  T
Q  100 aagtccttaac 110  Q
    ||||| |||||    
T  3074177 aagtctttaac 3074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 40874826 - 40874934
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaa-gttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    ||||||||||||||||||||||||||||| |||  |||||||||| ||| ||||| ||  ||| || ||||||||||  |||| ||||||||||||||||    
T  40874826 taaattaagtaattattttttaaaaatgttaaactttttcaattttcaacgcactaatggcactaactttcataaaagtttactatttaaagtccttaac 40874925  T
Q  111 tagtgcccc 119  Q
     ||||||||    
T  40874926 cagtgcccc 40874934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4655067 - 4654992
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 76  Q
    ||||||||| ||||||||  |||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||    
T  4655067 tttaagcatgctaaattagataattatttttttaaaatatcaaagttttcaattttcaatgcaccgattacacaaa 4654992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 21277564 - 21277666
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||||||||  || ||| ||||||  |||||||||||  ||||||||     
T  21277564 taaattaagtaattatttttttaaaatgtcaaacttttcaa-ttgcaatgcactgattacagtaacttttataaaagtttaccatttaagatccttaacc 21277662  T
Q  112 agtg 115  Q
    ||||    
T  21277663 agtg 21277666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 30822815 - 30822764
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgca 63  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30822815 taaattaagtaattattttttgaaaatgtcaaagttttcaatttccaatgca 30822764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 2826062 - 2825977
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 86  Q
    ||||||||||||||| |||| |||||||||||||||| || |||  |||| |||||||||||| |||||||||| ||||| |||||    
T  2826062 tttaagcatactaaaataagaaattattttttaaaaaagtaaaatatttcgatttccaatgcattgattacacacatttttataaa 2825977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 9448465 - 9448570
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgat-tacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||| |  || || ||||||||||  |||  |||||| ||||||||    
T  9448465 ctaaattaagtagttattttttaaaactgtcaaacttttcaattttcaatgcactgatgtgtactaactttcataaaagtttattatttaaggtccttaa 9448564  T
Q  110 ctagtg 115  Q
    ||||||    
T  9448565 ctagtg 9448570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 12762965 - 12762896
Alignment:
Q  13 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttca 82  Q
    |||||||||||||||| || |||||||| ||| ||||||||||||||||||||| ||||||||| |||||    
T  12762965 aaattaagtaattattcttaaaaaatgttaaaattttcaatttccaatgcactgtttacacaaactttca 12762896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29685810 - 29685694
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| ||| |||||| ||||||||||| ||| ||||| | |||||| ||||||| ||| |||| |||||||||||||||  ||||||||||  |||| |    
T  29685810 tttaaacatgctaaataaagtaattattctttcaaaatttaaaagttctcaattttcaacgcaccgattacacaaatttttgtaaaaagttattatttta 29685711  T
Q  101 agtccttaactagtgcc 117  Q
      |||||||||||||||    
T  29685710 gatccttaactagtgcc 29685694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13538396 - 13538495
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||||||||||||||||   ||||||| ||||||||  |||||   |||||||||||||||| ||| |||| || ||||||||||||||||| ||||||    
T  13538396 tttaagcatactaaattagaaaattattctttaaaaaattcaaataattcaatttccaatgcattgaatacataacttttcataaaaagttactatttaa 13538495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30869666 - 30869589
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaatttt 80  Q
    ||||||||| ||||||||| |  ||||| ||||||||||| ||||||||||||||| ||| ||||||| |||||||||||    
T  30869666 tttaagcatgctaaattaaat--ttattctttaaaaatgttaaagttttcaatttctaatacactgataacacaaatttt 30869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 11385462 - 11385561
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcac-tgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||| ||||||||||| ||||||| | ||||| ||||| ||||||||| ||| | || ||||||| ||| ||||||||||| |||||||| |||||||    
T  11385462 ctaaatcaagtaattattctttaaaattatcaaatttttctatttccaatacactttataacacaaacttttataaaaagttatcatttaaaatccttaa 11385561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 28695684 - 28695605
Alignment:
Q  36 aatgtcaaagttttcaatttccaatgcactg-attacacaaattttcataaaaagttaccatttaaagtccttaactagt 114  Q
    ||||||||||| |||||||||||||||| |  |||||||||| ||| |||||||||||| |||||||||  |||||||||    
T  28695684 aatgtcaaagtgttcaatttccaatgcaatttattacacaaacttttataaaaagttactatttaaagtgtttaactagt 28695605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 18043841 - 18043942
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| |||||||||| ||||| | ||||||| ||||| | |||||||| | ||| ||||||| | |||||||||| ||| |||||||||||| ||||||    
T  18043841 tttaaacatactaaataaagtact-atttttttaaaatttaaaagtttttagttttcaatgcattaattacacaaagttttataaaaagttactatttaa 18043939  T
Q  101 agt 103  Q
    |||    
T  18043940 agt 18043942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 27692822 - 27692744
Alignment:
Q  16 ttaagtaattattttttaaaaatgtcaaagtttt-caatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    |||||||||||||||||  |||||| || ||||| |||||||||||||| | |||||| ||||||| ||||||||||||    
T  27692822 ttaagtaattattttttttaaatgtaaatgtttttcaatttccaatgcatttattacataaatttttataaaaagttac 27692744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 5962023 - 5961954
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 116  Q
    ||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||  ||||| ||||||    
T  5962023 tttcaatttccaatgcattgattacataaattttcaaaaacagttactatttaaaggtcttaaatagtgc 5961954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 37284981 - 37284896
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccat 96  Q
    ||||||||||||||||||||||||||| | ||| |||||||||| ||||||| | ||||| |||| ||  || |||||||||||||    
T  37284981 taaattaagtaattattttttaaaaatcttaaatttttcaattttcaatgcaataattacgcaaacttctataaaaaagttaccat 37284896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2796624 - 2796517
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    |||||||||||||||| |||||||||||||||||||         |||||||||| ||||  |||||||||||||| ||| ||||||| |||| |||| |    
T  2796624 tttaagcatactaaataaagtaattattttttaaaa---------ttttcaattttcaatatactgattacacaaacttttataaaaaattactatttta 2796534  T
Q  101 agtccttaactagtgcc 117  Q
      ||||||| |||||||    
T  2796533 tatccttaattagtgcc 2796517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 10183219 - 10183299
Alignment:
Q  30 tttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaac 110  Q
    ||||||||||||||| ||||||||||  |||||| | |||| ||||||||||||||| | |||| ||||||  ||||||||    
T  10183219 tttaaaaatgtcaaaattttcaatttttaatgcattaattatacaaattttcataaatatttactatttaagatccttaac 10183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11944979 - 11944892
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    |||||| || |||| || ||||||||||||| |||||||||||   || |||||| ||||||| ||| ||||||| ||||||||||||    
T  11944979 tttaaggatcctaattttagtaattatttttaaaaaatgtcaactattacaattttcaatgcattgaatacacaacttttcataaaaa 11944892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 15806105 - 15806054
Alignment:
Q  42 aaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  15806105 aaagttttcaattttcaatgcattgattacacaaacttttataaaaagttac 15806054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 3666533 - 3666431
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||||||| ||||||||| | ||| |||| ||||  |||| || |||||||| ||| ||||||||||| |||  ||||||  || ||||||    
T  3666533 taaattaagtaattattctttaaaaatattaaaatttttaattctcaatacattgattacataaactttcataaaaaattattatttaagatctttaact 3666434  T
Q  112 agt 114  Q
    |||    
T  3666433 agt 3666431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 6761801 - 6761731
Alignment:
Q  32 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaag 102  Q
    |||||| ||||||  ||||||||||||||||| |||||||| ||||||||| |||||| |||  |||||||    
T  6761801 taaaaaagtcaaatatttcaatttccaatgcattgattacataaattttcaaaaaaagatacattttaaag 6761731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 9153568 - 9153494
Alignment:
Q  13 aaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaa 87  Q
    |||||||| ||||||| |||||||| | ||||   |||||||||||||||| ||| |||||||||||| ||||||    
T  9153568 aaattaagaaattattctttaaaaaaggcaaacacttcaatttccaatgcattgaatacacaaatttttataaaa 9153494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 33898685 - 33898643
Alignment:
Q  67 attacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  33898685 attacacaaatttttataaaaagttaccatttaaggtccttaa 33898643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 7271831 - 7271880
Alignment:
Q  52 atttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||||||||||| |||||||| | ||||||||||||||||| ||||||||    
T  7271831 atttccaatgcattgattacatatattttcataaaaagttatcatttaaa 7271880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 8086966 - 8087051
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatt 97  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||  |||| || ||| ||| ||| ||| ||||||| ||| ||||    
T  8086966 taaattaaataattattttttaaaaatgttaaacttttcaatttttaatgtaccgataacataaacttttataaaaatttaacatt 8087051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 8333665 - 8333580
Alignment:
Q  16 ttaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaa 101  Q
    ||||||||||||| ||||| || ||||||  ||||||||  |||||||  || |||||||||||| ||||||| ||||||| ||||    
T  8333665 ttaagtaattattctttaataaagtcaaacatttcaattctcaatgcatcgaatacacaaatttttataaaaacttaccatctaaa 8333580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 814996 - 815088
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| | ||||| || ||||||||||||||||  |||||  |  ||| |||||||||| |||||||||  ||||||||||||| ||||    
T  814996 tttaagcatcccaaatttagaaattattttttaaaaaaatcaaatgtcacaaattccaatgcattgattacaccgattttcataaaaacttac 815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 18684365 - 18684453
Alignment:
Q  4 aagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagtta 92  Q
    |||||| |||||||| | | ||||| |||||||| |||| |   |||||||||||||| | | | ||||||||||||||||||||||||    
T  18684365 aagcatgctaaattaggaagttattctttaaaaaagtcatacaattcaatttccaatgtattaaatacacaaattttcataaaaagtta 18684453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28858104 - 28858152
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagtttt 49  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||| ||||    
T  28858104 tttaagcattctaaattaagtaaatattctttaaaaatgtcaaattttt 28858152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 33963036 - 33962932
Alignment:
Q  14 aattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactag 113  Q
    ||||||| ||||||| |||||||| ||  ||   |||||||| ||||||| ||| | ||||| |||||||||||| |||  |||||||||||||||  ||    
T  33963036 aattaagaaattattctttaaaaaagtttaacacttcaattttcaatgcattgaatgcacaatttttcataaaaatttattatttaaagtccttaaagag 33962937  T
Q  114 tgccc 118  Q
    |||||    
T  33962936 tgccc 33962932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 39647879 - 39647767
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaa 100  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||   |||  ||||||||  |  ||||| |||||| ||| ||||||| ||  || ||||    
T  39647879 tttaaacattctaaattaagtaattattttttaaaaatattaagacttttgatttccaaaacgttgattgcacaaaattttataaaaaattgtcaattaa 39647780  T
Q  101 agtccttaactag 113  Q
    |||||||||||||    
T  39647779 agtccttaactag 39647767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 44838626 - 44838730
Alignment:
Q  11 ctaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcat-aaaaagttaccatttaaagtccttaa 109  Q
    |||||| ||||||||||| ||| ||||| | |||   |||||||| |||| || |||||||||||| ||| || |||||||||  |||||| ||||||||    
T  44838626 ctaaataaagtaattattcttttaaaatttaaaaaaattcaattttcaatacattgattacacaaacttttataaaaaagttattatttaaggtccttaa 44838725  T
Q  110 ctagt 114  Q
    |||||    
T  44838726 ctagt 44838730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 44941156 - 44941072
Alignment:
Q  32 taaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaactagtgc 116  Q
    |||||| || |||| |||| |||||| ||||| |||||||| | |||||| | | || ||||||||||||| |||||||||||||    
T  44941156 taaaaaagttaaagatttcgatttccgatgcattgattacatatattttcctgataaattaccatttaaaggccttaactagtgc 44941072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19890295 - 19890208
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    ||||||||| ||||||| |||||||||| ||| |||| |||||   || |||||||||||||| | | ||||||| ||||||| ||||    
T  19890295 tttaagcatcctaaatttagtaattattcttttaaaaagtcaactattacaatttccaatgcatttaatacacaacttttcattaaaa 19890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37313775 - 37313700
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaa 76  Q
    |||||||||  |||||||||||||| || ||||||||  ||||| |||| |||||  |||||||| ||||||||||    
T  37313775 tttaagcattttaaattaagtaatttttctttaaaaaaatcaaaatttttaatttgtaatgcactaattacacaaa 37313700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 16944811 - 16944873
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||| ||| ||||    
T  16944811 tttcaattttcaatgtattgaatacacaaatttttataaaaacttaccatttaacgtctttaa 16944873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 17015476 - 17015538
Alignment:
Q  47 tttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaa 109  Q
    ||||||||| ||||| | ||| |||||||||||| ||||||| ||||||||||| ||| ||||    
T  17015476 tttcaattttcaatgtattgaatacacaaatttttataaaaacttaccatttaacgtctttaa 17015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 19495215 - 19495288
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 86  Q
    ||||||||||||||||| ||| |||| ||||||  |||| |||||||||||| |||||||||  ||||| |||||    
T  19495215 taaattaagtaattattattttaaaa-gtcaaatatttcgatttccaatgcattgattacacccatttttataaa 19495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 11364702 - 11364739
Alignment:
Q  65 tgattacacaaattttcataaaaagttaccatttaaag 102  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  11364702 tgattatacaaatttttataaaaagttaccatttaaag 11364739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 14368577 - 14368638
Alignment:
Q  255 agtctttcccccatttctatggagacctattccttctcgaattggaatagttatctgtatca 316  Q
    |||||||||  | ||| ||||||||||| |||||||| ||||||||||| |||| |||||||    
T  14368577 agtctttccttcgtttttatggagacctgttccttcttgaattggaataattatatgtatca 14368638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25622534 - 25622618
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaa 86  Q
    ||||| ||| |||||||||||||||| ||||||||||| |||||  || |||||| ||||||| | |||||| |  ||||||||||    
T  25622534 tttaaacattctaaattaagtaatta-tttttaaaaatatcaaatattacaattttcaatgcattaattacatattttttcataaa 25622618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 32787623 - 32787586
Alignment:
Q  65 tgattacacaaattttcataaaaagttaccatttaaag 102  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  32787623 tgattacacaaattttcatataaagttatcatttaaag 32787586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 21004775 - 21004811
Alignment:
Q  65 tgattacacaaattttcataaaaagttaccatttaaa 101  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  21004775 tgattacacaaattttcaaaaaaaattaccatttaaa 21004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41543977 - 41544065
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgt-caaagttttcaatttccaatgcactgattacacaaattttcataaaaa 88  Q
    |||||||||| ||||||| | ||||||| ||||||||  | ||||   |||||||||||||||| ||| |||| || ||||||||||||    
T  41543977 tttaagcatattaaattaggaaattattctttaaaaaaattcaaatagttcaatttccaatgcaatgaatacataatttttcataaaaa 41544065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26701 - 26793
Alignment:
Q  1 tttaagcatactaaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttac 93  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||    
T  26701 tttaagcatgctaaattaagtaattattattttaaaatgtcaaagttttcaattttcaatgcactgattacacaaactttcgtaaaaagttac 26793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 19578 - 19686
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||  |||  |  ||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  19578 taaattaagtaattattctttaaaaatgttaaagttttcaatttttaatatatcgattacacaaattttcataaaaagttatcatttaaggtctttaact 19677  T
Q  112 agtgcccca 120  Q
    |||||||||    
T  19678 agtgcccca 19686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 35274 - 35376
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaatttccaatgcactgattacacaaattttcataaaaagttaccatttaaagtccttaact 111  Q
    ||||| ||||||||||||||||||| ||| ||| |||||||||| || |||| |||||||| ||| ||||||||||| |||| || ||| ||||||||||    
T  35274 taaatcaagtaattattttttaaaa-tgttaaacttttcaattttcagtgcaatgattacataaactttcataaaaatttactatctaatgtccttaact 35372  T
Q  112 agtg 115  Q
    ||||    
T  35373 agtg 35376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 5773 - 5816
Alignment:
Q  12 taaattaagtaattattttttaaaaatgtcaaagttttcaattt 55  Q
    |||||||||||||| || ||||||||||||||||||||||||||    
T  5773 taaattaagtaatttttctttaaaaatgtcaaagttttcaattt 5816  T

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