View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7038_low_17 (Length: 300)
Name: NF7038_low_17
Description: NF7038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7038_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 38046457 - 38046743
Alignment:
| Q |
1 |
tactatttaggactcgtacgaggacatgataaaataaggactaatagattaagagagttggataagaattaaagaggatatatatgagtctgataagttc |
100 |
Q |
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| T |
38046457 |
tactatttaggactcgtacgacgacatgataaaataaggacaaatagattaagagagttggataagaattaaagaggatatatatgagtctgataagttc |
38046556 |
T |
|
| Q |
101 |
ttatatttttaaatgtgctgtatcttaggcagtccactgtatagtattgtgtgttatatcacgtgtttgagtgattaagagatggaggatgatagtgatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38046557 |
ttatatttttaaatgtgctgtatcttaggcagtccactgtatagtattgtgtgttatatcacgtgtttgagtgattaagagatggaggatgatagtgatg |
38046656 |
T |
|
| Q |
201 |
aagggtgcagggtggcagcgatgatgatggagagtgttgggtggcaatggtgaaaggtggtcagtgacggcagtcatggagtgatgt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38046657 |
aagggtgcagggtggcagcgatgatgatggagagtgttgggtggcaatggtgaaaggtggtcagtgacggcagtcatggagtgatgt |
38046743 |
T |
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