View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7038_low_2 (Length: 807)
Name: NF7038_low_2
Description: NF7038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7038_low_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 737; Significance: 0; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 737; E-Value: 0
Query Start/End: Original strand, 1 - 789
Target Start/End: Original strand, 36399673 - 36400461
Alignment:
| Q |
1 |
gattgggttaagcgtttcgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
100 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36399673 |
gattggggtaagcgttttgaaattatttgtggcattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaag |
36399772 |
T |
|
| Q |
101 |
ccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagctttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36399773 |
ccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagatttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaag |
36399872 |
T |
|
| Q |
201 |
agtggtcggaacatagtatgtctcaaacacttataatcacgaaattatacagatggatatgtattttttatgatactctaaccattttgtataattgcag |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36399873 |
agtggtcggaacatagtatgtctcaaacacttataatcacgaaattatacagatggatatgtattttttatgatactctaaccattttgtataattgcag |
36399972 |
T |
|
| Q |
301 |
tggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaag |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36399973 |
tggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaag |
36400072 |
T |
|
| Q |
401 |
agaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttatatatattaaaaagagtagccttaaaacaggcctacaatct |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36400073 |
agaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttaaatatattaaaaagagtagccttaaaacaggcctacaatct |
36400172 |
T |
|
| Q |
501 |
aatgatatataac--atgtatatttaaaaactctgttgtacatttatatgtgtggactgtatggacagaagaaagggccttggatatagttgatgaagca |
598 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36400173 |
aatgatatataacatatgtatatttaaaaactc--ttgtgcatttataggtgtggactgtatggacagaagaaagggccttggatatagttgatgaagca |
36400270 |
T |
|
| Q |
599 |
ctaaaccagtcttatccccctgctatagttctgagatgcattcaaattggactattgtgtgtgcaagaaaatgcgatgaatagaccatcaatgttagaag |
698 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36400271 |
ctaaaccagtcttatccccctgctatagttctgagatgcattcaaattggactcttgtgtgtgcaagaaaatgcgatgaatagaccatcaatgttagaag |
36400370 |
T |
|
| Q |
699 |
tggtttttatgctagccaatgacacgcctctttgcgcacctcaaaaaccagcatttttattcaacgacgacaaagatttgcaagagtcatc |
789 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36400371 |
tggtttttatgctagccaatgacacgcctctttgcgcacctcaaaaaccagcatttttattcaacgacgacaaagatttgcaagagtcatc |
36400461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 528; E-Value: 0
Query Start/End: Original strand, 1 - 755
Target Start/End: Original strand, 36407130 - 36407887
Alignment:
| Q |
1 |
gattgggttaagcgtttcgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
100 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36407130 |
gattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaag |
36407229 |
T |
|
| Q |
101 |
ccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagctttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaag |
200 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36407230 |
ccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaag |
36407329 |
T |
|
| Q |
201 |
agtggtcggaacatagtatgtctcaaacacttataatcacgaaattatacagatggatatgtattttttatgatactctaaccattttgtataattgcag |
300 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
36407330 |
agtggtcggaacatagtatgtgtcacacacttata-tcacgaaaatatacagatggatatgtatttt-tatgatactctaaccattttgtttaattgcag |
36407427 |
T |
|
| Q |
301 |
tggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaag |
400 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36407428 |
tggatatatgtcaccagaatatgcaatggaaggacgatattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaag |
36407527 |
T |
|
| Q |
401 |
agaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttatatatattaaaaagagtagccttaaaacaggcctacaatct |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||| |
|
|
| T |
36407528 |
agaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttacatataataaaaagagtagccttaaaattggccaacaatct |
36407627 |
T |
|
| Q |
501 |
aatgat-----atataacatgtatatttaaaaactctgttgtacatttatatgtgtggactgtatggacagaagaaagggccttggatatagttgatgaa |
595 |
Q |
| |
|
|||||| | || |||| | |||||||||| | |||||| |||||||| |||||||| |||||||||||||||| ||||||||||| |||||| | |
|
|
| T |
36407628 |
aatgatgcatgacatgacatatttatttaaaaattgtgttgtgcatttataggtgtggacactatggacagaagaaagagccttggatattgttgatcca |
36407727 |
T |
|
| Q |
596 |
gcactaaaccagtcttatccccctgctatagttctgagatgcattcaaattggactattgtgtgtgcaagaaaatgcgatgaatagaccatcaatgttag |
695 |
Q |
| |
|
|||||||||||||||||||| | || |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
36407728 |
gcactaaaccagtcttatcctcttgatatagttctgagatgcattcaaattggacttttgtgtgtgcaagaaaatgcaattaatagaccatcaatgttag |
36407827 |
T |
|
| Q |
696 |
aagtggtttttatgctagccaatgacacgcctctttgcgcacctcaaaaaccagcatttt |
755 |
Q |
| |
|
|| | ||||| |||||| |||||| || ||||| ||| ||||||||||||||||||||| |
|
|
| T |
36407828 |
aaattgttttcatgctatgcaatgaaacacctctctgcccacctcaaaaaccagcatttt |
36407887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 488; E-Value: 0
Query Start/End: Original strand, 61 - 755
Target Start/End: Original strand, 36412313 - 36413010
Alignment:
| Q |
61 |
caagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagctttcggtatggcta |
160 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||||||| |
|
|
| T |
36412313 |
caagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggcta |
36412412 |
T |
|
| Q |
161 |
gaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagtatgtctcaaacacttataatcacgaaattatacagatggatat |
260 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
36412413 |
gaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagtatgtgtcacacacttata-tcacgaaaatatacagatggatat |
36412511 |
T |
|
| Q |
261 |
gtattttttatgatactctaaccattttgtataattgcagtggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtctt |
360 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36412512 |
gtatttt-tatgatactctaaccattttgtttaattgcagtggatatatgtcaccagaatatgcaatggaaggacgatattcaacaaaatctgatgtctt |
36412610 |
T |
|
| Q |
361 |
cagttatggggtcttactactggagattattgctggcaagagaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttat |
460 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36412611 |
cagttatggggtcttactactggagattattgctggcaagagaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttac |
36412710 |
T |
|
| Q |
461 |
atatattaaaaagagtagccttaaaacaggcctacaatctaatgat-----atataacatgtatatttaaaaactctgttgtacatttatatgtgtggac |
555 |
Q |
| |
|
||||| |||||||||||||||||||| |||| ||||||||||||| | || |||| | |||||||||| | |||||| |||||||| |||||||| |
|
|
| T |
36412711 |
atataataaaaagagtagccttaaaattggccaacaatctaatgatgcatgacatgacatatttatttaaaaattgtgttgtgcatttataggtgtggac |
36412810 |
T |
|
| Q |
556 |
tgtatggacagaagaaagggccttggatatagttgatgaagcactaaaccagtcttatccccctgctatagttctgagatgcattcaaattggactattg |
655 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| | || |||||||||||||||||||||||||||||| ||| |
|
|
| T |
36412811 |
actatggacagaagaaagagccttggatattgttgatccagcactaaaccagtcttatcctcttgatatagttctgagatgcattcaaattggacttttg |
36412910 |
T |
|
| Q |
656 |
tgtgtgcaagaaaatgcgatgaatagaccatcaatgttagaagtggtttttatgctagccaatgacacgcctctttgcgcacctcaaaaaccagcatttt |
755 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||| | ||||| |||||| |||||| || ||||| ||| ||||||||||||||||||||| |
|
|
| T |
36412911 |
tgtgtgcaagaaaatgcaattaatagaccatcaatgttagaaattgttttcatgctatgcaatgaaacacctctctgcccacctcaaaaaccagcatttt |
36413010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 463
Target Start/End: Original strand, 36435738 - 36436200
Alignment:
| Q |
1 |
gattgggttaagcgtttcgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
100 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36435738 |
gattggggtaagcgttttgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
36435837 |
T |
|
| Q |
101 |
ccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagctttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaag |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36435838 |
ccagcaatgttctccttgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatacaagcaagaacaaaaag |
36435937 |
T |
|
| Q |
201 |
agtggtcggaacatagtatgtctcaaacacttataatcacgaa-attatacagatggatatgtattttttatgatactctaaccattttgtataattgca |
299 |
Q |
| |
|
|||||| |||||||||||||| ||| || ||||||| || || |||||| ||||| || |||||||| ||||| ||| |||| |||||||||||||||| |
|
|
| T |
36435938 |
agtggttggaacatagtatgtttcatacccttataaccattaagattatagagatgaatctgtattttgtatgagact-taactattttgtataattgca |
36436036 |
T |
|
| Q |
300 |
gtggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaa |
399 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| || |||||||||||||||||||||||| | |
|
|
| T |
36436037 |
gtggatatatgtcaccggaatatgcaatggaaggacgatattcaactaaatcggatgtcttcagttttggtgttttactactggagattattgctggcca |
36436136 |
T |
|
| Q |
400 |
gagaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttatata |
463 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36436137 |
aagaaacacacattgtgaaacaggaagagactccccaaatttaattggacatgtaagttatata |
36436200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 28 - 789
Target Start/End: Original strand, 36389509 - 36390272
Alignment:
| Q |
28 |
tgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgatgctgaaa |
127 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||| || |
|
|
| T |
36389509 |
tgtgggattgctcgaggcgttttatatcttcatcaagattcaaggctgaaaatcattcatagagacctaaaagccagcaatgttctccttgacgctgcaa |
36389608 |
T |
|
| Q |
128 |
tgaatcccaaaatctcagctttcggtatggctagaatatttggagaagatga---aatccaagcaagaacaaaaagagtggtcggaacatagtatgtctc |
224 |
Q |
| |
|
|||| || |||||||||| ||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
36389609 |
tgaaccctaaaatctcagattttggtatggctagaatatttggagacgatgatgaaatccaagcaataacaaaaagagtggttggaacatagtatgtctc |
36389708 |
T |
|
| Q |
225 |
aaacacttataatcacgaa-attatacagatggatatgtattttttatgatactctaaccattttgtataattgcagtggatacatgtcacccgaatatg |
323 |
Q |
| |
|
| || |||||| |||| | |||||| ||||| |||| ||||||| |||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
36389709 |
atacccttatattcaccatgattatatagatgtcaccatatt----------ctctaacaatttcctataattgcagtggatacatgtcaccggaatatg |
36389798 |
T |
|
| Q |
324 |
caatggaaggacgatattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaagagaaacacacattgtgaaattgg |
423 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| | ||||||||||||| ||||| || |
|
|
| T |
36389799 |
caatggaaggacgatattcaacaaaatctgatgtcttcagttatggtgtcatactactagagattattgctggccaaagaaacacacattctgaaacagg |
36389898 |
T |
|
| Q |
424 |
aagagactccccaaatttaattggacatgtaagttatatatattaaaa-------agagtagccttaaaacaggcctacaatctaatgatatataacatg |
516 |
Q |
| |
|
||||| |||| |||||||||||||||||||||| || | | ||||| | |||| |||||||| || | | ||| |||| | || | ||| |
|
|
| T |
36389899 |
aagagcatccctgaatttaattggacatgtaagttctaaaaaataaaataaagaaaaagtatccttaaaattggtcgaaaatttaatcgtgta--agatg |
36389996 |
T |
|
| Q |
517 |
tata---tttaaaaactctgttgtacatttatatgtgtggactgtatggacagaagaaagggccttggatatagttgatgaagcactaaaccagtcttat |
613 |
Q |
| |
|
||| |||||| | | |||||||||||| || |||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
36389997 |
tattatttttaaagattgtgttgtacatttgtaggtgtggacactatggacagaaggaagggccttggatacagttgatccagcactaaaccagtcttat |
36390096 |
T |
|
| Q |
614 |
ccccctgctatagttctgagatgcattcaaattggactattgtgtgtgcaagaaaatgcgatgaatagaccatcaatgttagaagtggtttttatgctag |
713 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
36390097 |
ccttctgctatagttctgagatgcattcaaataggacttttgtgtgtgcaagaaaatgcaattaatagaccatcaatgttagatgttgttttcatgctag |
36390196 |
T |
|
| Q |
714 |
ccaatgacacgcctctttgcgcacctcaaaaaccagcatttttattcaacgacgacaaagatttgcaagagtcatc |
789 |
Q |
| |
|
||||||| | ||||||||| |||| ||||||||||||||||||||||| | | |||| | |||||||||||||| |
|
|
| T |
36390197 |
ccaatgaaatacctctttgcccaccccaaaaaccagcatttttattcaatggcagcaaatacttgcaagagtcatc |
36390272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 46 - 461
Target Start/End: Original strand, 36370513 - 36370935
Alignment:
| Q |
46 |
gttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcag |
145 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36370513 |
gttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcag |
36370612 |
T |
|
| Q |
146 |
ctttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagtatgtctcaaacacttataatcacgaaat |
245 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36370613 |
attttggtatggctagaatatttggagaagatgaaattcaagcaagaacaaaaagagtggtcggaacatagtatgtctcaaacacttataatcacgaaat |
36370712 |
T |
|
| Q |
246 |
tatacagatggatatgtattttttatgatactc-taaccattt-------tgtataattgcagtggatacatgtcacccgaatatgcaatggaaggacga |
337 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||| |
|
|
| T |
36370713 |
tatacagatggatatgta-tttttatgatactcttaacaattttgtataatgtataattgcagtgaatatatgtcaccagaatatgcaatggaaggacga |
36370811 |
T |
|
| Q |
338 |
tattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaagagaaacacacattgtgaaattggaagagactccccaa |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| | ||||||||| ||||||||| |||||||| || |||| |
|
|
| T |
36370812 |
tattcaacaaaatctgatgtcttcagttatggtgtcatactactagagattattgctggccaaagaaacacatattgtgaaacaggaagagaatcaccaa |
36370911 |
T |
|
| Q |
438 |
atttaattggacatgtaagttata |
461 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
36370912 |
atttaattggacatgtaagttata |
36370935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 463
Target Start/End: Original strand, 36376240 - 36376702
Alignment:
| Q |
1 |
gattgggttaagcgtttcgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
100 |
Q |
| |
|
||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36376240 |
gattggggaaagcgttttgaaattatttgtgggattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
36376339 |
T |
|
| Q |
101 |
ccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagctttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaag |
200 |
Q |
| |
|
||||||| |||||||| ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36376340 |
ccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatacaagcaagaacaaaaag |
36376439 |
T |
|
| Q |
201 |
agtggtcggaacatagtatgtctcaaacacttataatcacgaa-attatacagatggatatgtattttttatgatactctaaccattttgtataattgca |
299 |
Q |
| |
|
|||||| |||||||||||||| ||| || ||||||| || || |||||| ||||| || |||||||| ||||| ||| |||| |||||||||||||||| |
|
|
| T |
36376440 |
agtggttggaacatagtatgtttcacacccttataaccattaagattatagagatgaatctgtattttgtatgagact-taactattttgtataattgca |
36376538 |
T |
|
| Q |
300 |
gtggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaa |
399 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| || |||||||||||||||||||| ||| | |
|
|
| T |
36376539 |
gtggatatatgtcaccggaatatgcaatggaaggacgatattcaactaaatcggatgtcttcagttttggtgttttactactggagattattgccggcca |
36376638 |
T |
|
| Q |
400 |
gagaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttatata |
463 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36376639 |
aagaaacacacattgtgaaacaggaagagactccccaaatttaattggacatgtaagttatata |
36376702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 265 - 762
Target Start/End: Original strand, 36419577 - 36420074
Alignment:
| Q |
265 |
tttttatgatactctaaccattttgtataattgcagtggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtcttcagt |
364 |
Q |
| |
|
|||||||||| || || | ||||||||||||||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
36419577 |
tttttatgatgctatagctattttgtataattgcagtggatatatgtctccggaatatgcaatgcaaggacgatattcaacaaaatctgatgtcttcagt |
36419676 |
T |
|
| Q |
365 |
tatggggtcttactactggagattattgctggcaagagaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagttatatat |
464 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36419677 |
tatggggtcttactactggagattattgctggcaagagaaacacacattgtgagacaggaagagactccccaaatttaattggacatgtaagttatatat |
36419776 |
T |
|
| Q |
465 |
attaaaaagagtagccttaaaacaggcctacaatctaatgatatataacatgtatatttaaaaactctgttgtacatttatatgtgtggactgtatggac |
564 |
Q |
| |
|
| |||||||||| ||||||||| |||| | ||| ||||| | || | | ||||||| | | |||| | ||||| || |||||||| ||||||| |
|
|
| T |
36419777 |
aataaaaagagtggccttaaaattggccgataatttaatggtgcatgatgtacttatttaatcattatgttatgcatttgtaggtgtggacactatggac |
36419876 |
T |
|
| Q |
565 |
agaagaaagggccttggatatagttgatgaagcactaaaccagtcttatccccctgctatagttctgagatgcattcaaattggactattgtgtgtgcaa |
664 |
Q |
| |
|
||||| || ||||||||||| |||||| ||||||||||||| | |||| | ||||||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
36419877 |
agaaggaaaagccttggatatggttgatcaagcactaaaccattattattcttctgctatagttctaagatgcattcaaattggactcttgtgtgtgcaa |
36419976 |
T |
|
| Q |
665 |
gaaaatgcgatgaatagaccatcaatgttagaagtggtttttatgctagccaatgacacgcctctttgcgcacctcaaaaaccagcatttttattcaa |
762 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| || ||||| |||||| |||||| || ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
36419977 |
gaaaatgcaattaatagaccgtcaatgttagatgttgttttcatgctatgcaatgaaacacctctttgcccacctcaaaaaccagcatttttattcaa |
36420074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 36429285 - 36429502
Alignment:
| Q |
1 |
gattgggttaagcgtttcgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
100 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36429285 |
gattgggtaaagcgttttgaaattatttgtgggattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
36429384 |
T |
|
| Q |
101 |
ccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagctttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaag |
200 |
Q |
| |
|
||||||| |||||||| ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36429385 |
ccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaattcaagcaagaacaaaaag |
36429484 |
T |
|
| Q |
201 |
agtggtcggaacatagta |
218 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
36429485 |
agtggtcggaacatagta |
36429502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 36419292 - 36419512
Alignment:
| Q |
1 |
gattgggttaagcgtttcgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaag |
100 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
36419292 |
gattgggttacgcgttttgaaattatttgtgggattgctcgaggtgtattatatcttcatcaagattcaaggctgaaaataatccatagagatctaaaag |
36419391 |
T |
|
| Q |
101 |
ccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagctttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaag |
200 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
36419392 |
ccagcaacgttctccttgatgctgtaatgaatcccaaaatctcggattttggtatggctagaatatttggagaagatgaaattcaagctagaacaaaaag |
36419491 |
T |
|
| Q |
201 |
agtggtcggaacatagtatgt |
221 |
Q |
| |
|
||| || |||||||||||||| |
|
|
| T |
36419492 |
agttgttggaacatagtatgt |
36419512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 234 - 461
Target Start/End: Original strand, 36401201 - 36401427
Alignment:
| Q |
234 |
taatcacgaaattatacagatggatatgtattttttatgatactctaaccattttgtataattgcagtggatacatgtcacccgaatatgcaatggaagg |
333 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
36401201 |
taattacgaaaatatacagatggatatgtatttt-tatgatactctaaccattttgtttaattgcagtggatatatgtcaccagaatatgcaatggaagg |
36401299 |
T |
|
| Q |
334 |
acgatattcaacaaaatctgatgtcttcagttatggggtcttactactggagattattgctggcaagagaaacacacattgtgaaattggaagagactcc |
433 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||| | ||||||||||||||||||| ||||||| ||| |
|
|
| T |
36401300 |
acgatattcaacgaaatctgatgtctttagttatggggtcttactgctagagattattgctggtcaaagaaacacacattgtgaaacaggaagagcttcc |
36401399 |
T |
|
| Q |
434 |
ccaaatttaattggacatgtaagttata |
461 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
36401400 |
ccaaatttaattggacatgtaagttata |
36401427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 519 - 789
Target Start/End: Original strand, 36376757 - 36377027
Alignment:
| Q |
519 |
tatttaaaaactctgttgtacatttatatgtgtggactgtatggacagaagaaagggccttggatatagttgatgaagcactaaaccagtcttatccccc |
618 |
Q |
| |
|
|||||||| | | |||||||||||| || |||||||| |||||||||||| ||| |||||||||||||||||| || ||||||||||| ||||||||| |
|
|
| T |
36376757 |
tatttaaagattgtgttgtacatttgtaggtgtggacactatggacagaaggaagagccttggatatagttgatccagaactaaaccagttttatccccc |
36376856 |
T |
|
| Q |
619 |
tgctatagttctgagatgcattcaaattggactattgtgtgtgcaagaaaatgcgatgaatagaccatcaatgttagaagtggtttttatgctagccaat |
718 |
Q |
| |
|
| |||||||| |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||| |||||| |||| |
|
|
| T |
36376857 |
ttctatagttatgagatgcattcaaattggacttctgtgtgtgcaagaaaatgcaattaatagaccatcaatgttagaagttgttttcatgctatgcaat |
36376956 |
T |
|
| Q |
719 |
gacacgcctctttgcgcacctcaaaaaccagcatttttattcaacgacgacaaagatttgcaagagtcatc |
789 |
Q |
| |
|
|| || ||||| ||| |||||||||||||||||||||||||||| | | || ||||||||||||| ||||| |
|
|
| T |
36376957 |
gaaacacctctctgcccacctcaaaaaccagcatttttattcaatggcaaccaagatttgcaagaatcatc |
36377027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 276 - 459
Target Start/End: Original strand, 36429551 - 36429734
Alignment:
| Q |
276 |
ctctaaccattttgtataattgcagtggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtcttcagttatggggtctt |
375 |
Q |
| |
|
||||||| |||||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
36429551 |
ctctaactattttgaataattgcagcggatatatgtcaccagaatatgcaatggaaggacgatattcaacgaaatctgatgtcttcagttatggggtcat |
36429650 |
T |
|
| Q |
376 |
actactggagattattgctggcaagagaaacacacattgtgaaattggaagagactccccaaatttaattggacatgtaagtta |
459 |
Q |
| |
|
||||||||||| |||||||||| | ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
36429651 |
actactggagactattgctggccaaagaaacacacattgtgaaaaaggaagagaatccccaaatttaattggacatgtaagtta |
36429734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 558 - 786
Target Start/End: Original strand, 36429823 - 36430051
Alignment:
| Q |
558 |
tatggacagaagaaagggccttggatatagttgatgaagcactaaaccagtcttatccccctgctatagttctgagatgcattcaaattggactattgtg |
657 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||| || ||||||||||| |||||| ||| ||| |||| |||||||||||||||||||||| |||| |
|
|
| T |
36429823 |
tatggacagaaggaagagccttggatatagttgatccagaactaaaccagttttatcctcctactacagttatgagatgcattcaaattggacttctgtg |
36429922 |
T |
|
| Q |
658 |
tgtgcaagaaaatgcgatgaatagaccatcaatgttagaagtggtttttatgctagccaatgacacgcctctttgcgcacctcaaaaaccagcattttta |
757 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||| |||||| ||||||||||||||| |
|
|
| T |
36429923 |
tgtgcaagaaaatgccatgaatagaccatcaatgttagaagttgttttcatgctagccaatgaaacacctctttgcccacctctaaaaccagcatttttc |
36430022 |
T |
|
| Q |
758 |
ttcaacgacgacaaagatttgcaagagtc |
786 |
Q |
| |
|
||||| | || |||||||||||||||| |
|
|
| T |
36430023 |
ttcaatggaaaccaagatttgcaagagtc |
36430051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 519 - 762
Target Start/End: Original strand, 36436267 - 36436510
Alignment:
| Q |
519 |
tatttaaaaactctgttgtacatttatatgtgtggactgtatggacagaagaaagggccttggatatagttgatgaagcactaaaccagtcttatccccc |
618 |
Q |
| |
|
|||||||| | | |||||||||||| || |||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| | |
|
|
| T |
36436267 |
tatttaaagattgtgttgtacatttgtaggtgtggacactatggacagaaggaagggccttggatacagttgatccagcactaaaccagtcttatccttc |
36436366 |
T |
|
| Q |
619 |
tgctatagttctgagatgcattcaaattggactattgtgtgtgcaagaaaatgcgatgaatagaccatcaatgttagaagtggtttttatgctagccaat |
718 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||||||||| || ||||| |||||| |||| |
|
|
| T |
36436367 |
tgctatagtactgagatgcattcaaataggacttttgtgtgtgcaagaaaatgcaattaatagaccatcaatgttagatgttgttttcatgctatgcaat |
36436466 |
T |
|
| Q |
719 |
gacacgcctctttgcgcacctcaaaaaccagcatttttattcaa |
762 |
Q |
| |
|
|| || |||||| | |||||| ||||||||||||||||||||| |
|
|
| T |
36436467 |
gaaacacctcttctcccacctctaaaaccagcatttttattcaa |
36436510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 560 - 762
Target Start/End: Original strand, 36371035 - 36371237
Alignment:
| Q |
560 |
tggacagaagaaagggccttggatatagttgatgaagcactaaaccagtcttatccccctgctatagttctgagatgcattcaaattggactattgtgtg |
659 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36371035 |
tggacagaaggaagggccttggatatggttgatcaagcactaaaccattcttatccttttgctatagttctgagatgcattcaaattggactcttgtgtg |
36371134 |
T |
|
| Q |
660 |
tgcaagaaaatgcgatgaatagaccatcaatgttagaagtggtttttatgctagccaatgacacgcctctttgcgcacctcaaaaaccagcatttttatt |
759 |
Q |
| |
|
||||||||||||| || | |||||| ||| |||||||||| ||||| |||||||||||||| || |||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
36371135 |
tgcaagaaaatgcaattattagaccgtcagtgttagaagttgttttcatgctagccaatgaaacacctcttcgcgaaccaaaaaaaccagcatttttatt |
36371234 |
T |
|
| Q |
760 |
caa |
762 |
Q |
| |
|
||| |
|
|
| T |
36371235 |
caa |
36371237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 560 - 719
Target Start/End: Original strand, 36401518 - 36401677
Alignment:
| Q |
560 |
tggacagaagaaagggccttggatatagttgatgaagcactaaaccagtcttatccccctgctatagttctgagatgcattcaaattggactattgtgtg |
659 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||| || ||||||||||| |||||||||| |||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
36401518 |
tggacagaaggaagagccttggatatagttgatccagaactaaaccagttttatcccccttctatagttatgagatgcattcaaattggacttctgtgtg |
36401617 |
T |
|
| Q |
660 |
tgcaagaaaatgcgatgaatagaccatcaatgttagaagtggtttttatgctagccaatg |
719 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
36401618 |
tgcaagaaaatgcaattaatagaccatcaatgttggaagttgttttcatgctagccaatg |
36401677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36370448 - 36370491
Alignment:
| Q |
1 |
gattgggttaagcgtttcgaaattatttgtggcattgctcgagg |
44 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
36370448 |
gattgggttaagcgttttgaaattatttgtgtgattgctcgagg |
36370491 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 2662588 - 2662500
Alignment:
| Q |
52 |
tatcttcatcaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaat |
140 |
Q |
| |
|
||||||||| ||||||||| || | |||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| ||||| |
|
|
| T |
2662588 |
tatcttcatagagattcaagactaagaataattcatagagatctaaaagcaagcaatgttcttttagatggcgaaatgaatccaaaaat |
2662500 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 2716952 - 2716914
Alignment:
| Q |
296 |
tgcagtggatacatgtcacccgaatatgcaatggaagga |
334 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
2716952 |
tgcagtggatacatgtctccggaatatgcaatggaagga |
2716914 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 2723575 - 2723538
Alignment:
| Q |
296 |
tgcagtggatacatgtcacccgaatatgcaatggaagg |
333 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
2723575 |
tgcagtggatacatgtctccggaatatgcaatggaagg |
2723538 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 2745405 - 2745368
Alignment:
| Q |
296 |
tgcagtggatacatgtcacccgaatatgcaatggaagg |
333 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
2745405 |
tgcagtggatacatgtctccggaatatgcaatggaagg |
2745368 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 15697420 - 15697360
Alignment:
| Q |
85 |
catagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcag |
145 |
Q |
| |
|
||||||||||| ||||||||||||||||| || |||| |||||||||||| ||||| |||| |
|
|
| T |
15697420 |
catagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccgaaaatatcag |
15697360 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 15692749 - 15692684
Alignment:
| Q |
80 |
taattcatagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcag |
145 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||| | ||| |||||||||||||||||| |||| |
|
|
| T |
15692749 |
taattcatagagatctcaaagctagcaatgttctattagatcatgaaatgaatcccaaaatatcag |
15692684 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 15799924 - 15799867
Alignment:
| Q |
88 |
agagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcag |
145 |
Q |
| |
|
|||||||| ||||||||||||||||| || |||| |||||||||||| ||||| |||| |
|
|
| T |
15799924 |
agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcag |
15799867 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 15805456 - 15805399
Alignment:
| Q |
88 |
agagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcag |
145 |
Q |
| |
|
|||||||| ||||||||||||||||| || |||| |||||||||||| ||||| |||| |
|
|
| T |
15805456 |
agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcag |
15805399 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 19357642 - 19357703
Alignment:
| Q |
296 |
tgcagtggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgt |
357 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||| | ||||||||| |||||||| |
|
|
| T |
19357642 |
tgcagtggatacatgtctccagaatatgcaatggaaggaatttgttcaacaaagtctgatgt |
19357703 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 23560634 - 23560535
Alignment:
| Q |
22 |
attatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgatg |
121 |
Q |
| |
|
|||||||| || ||||| |||||| || | ||||||||||||||||| || |||| |||||||||||||| || ||| | |||||| || | ||||||| |
|
|
| T |
23560634 |
attatttgcggaattgcccgaggtcttctttatcttcatcaagattctagactgaggataattcatagagacctcaaaccaagcaatattttgcttgatg |
23560535 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 19500392 - 19500330
Alignment:
| Q |
297 |
gcagtggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgtct |
359 |
Q |
| |
|
|||||||||||||||| || |||||||| ||||||||| || ||||||||| ||||| |||| |
|
|
| T |
19500392 |
gcagtggatacatgtctccagaatatgccatggaaggaatatgttcaacaaagtctgacgtct |
19500330 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 19339621 - 19339682
Alignment:
| Q |
296 |
tgcagtggatacatgtcacccgaatatgcaatggaaggacgatattcaacaaaatctgatgt |
357 |
Q |
| |
|
||||||||||||||||| || |||||||| ||||||||| | ||||||||| |||||||| |
|
|
| T |
19339621 |
tgcagtggatacatgtctccagaatatgccatggaaggaatttgttcaacaaagtctgatgt |
19339682 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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