View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7042_high_10 (Length: 245)
Name: NF7042_high_10
Description: NF7042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7042_high_10 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 23 - 245
Target Start/End: Original strand, 36458432 - 36458654
Alignment:
| Q |
23 |
ggcaacacgttccagaccaccatataagttgcagaatttgatcatatacttcatatcatagacattccgtccaaaatatttc-gttaagatgcttaagaa |
121 |
Q |
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| T |
36458432 |
ggcaacacgttccagaccaccatataagttgcagaatttgatcatatacttcatatcatagacattctgtccaaa-tatttgtgttaagatgcttaagaa |
36458530 |
T |
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| Q |
122 |
ttcctccaatcgagacggtaagtaattctgagtcaaaatcttaactagatacccaaaatcatatgagctgtgaaatgtaacccaagaaactccactgttg |
221 |
Q |
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| T |
36458531 |
ttcctccaatcgagacggtaagtaattctgagtcaaaatcttaactagatacccaaaatcatatgagctgtgaaatgtaacccaagaaactccactgttg |
36458630 |
T |
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| Q |
222 |
actagtccagacttcagcctgaat |
245 |
Q |
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| T |
36458631 |
actagtccagacttcagtctgaat |
36458654 |
T |
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