View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7042_low_9 (Length: 334)
Name: NF7042_low_9
Description: NF7042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7042_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 19 - 329
Target Start/End: Original strand, 15752831 - 15753141
Alignment:
| Q |
19 |
gcaagaatgtcaagacttgttgaagaagcttctagcagaaagtcacaagcacaaagattcatagataatttcgcaaagtactatattcctggtatgtatc |
118 |
Q |
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| T |
15752831 |
gcaagaatgtcaagacttgttgaagaagcttctagcagaaagtcattagcacaaagattcatagataatttcgcaaagtactatattcctggtatgtatc |
15752930 |
T |
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| Q |
119 |
atgtacatcaaatttcttctgttggaagtggagaaaattattcttcactatttgttgctttcactgcaaacttttatccttggattaataaataagatag |
218 |
Q |
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| T |
15752931 |
atgtacatcaaatttcttctgttggaagtggagaaaattattcttcactatttgttgctttcactgcaaacttttatccttggattaataaataagatag |
15753030 |
T |
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| Q |
219 |
tgaactacattaccttattaatttttggaaagtcccccttaatgccagtattagtgtggtgaggccgacatgtccttgattcagaaccatgctttgtttt |
318 |
Q |
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| T |
15753031 |
tgaactagattaccttattaatttttggaaagtcccccttaatgccagtattagtgtggtgaggccgacatgtccttgattcagaaccatgctttgtttt |
15753130 |
T |
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| Q |
319 |
tgatgtccatc |
329 |
Q |
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| T |
15753131 |
tggtatccatc |
15753141 |
T |
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