View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7043_high_18 (Length: 289)
Name: NF7043_high_18
Description: NF7043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7043_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 13 - 272
Target Start/End: Original strand, 25792225 - 25792503
Alignment:
| Q |
13 |
aatatataaatttcattagaact-aaagagtgtccaccacatacgaacaccggatacaacacatacatttagacaccgatagtaatttaagaaaatataa |
111 |
Q |
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| T |
25792225 |
aatatataaatttcattagaacttaaagagtgtccaccacatacgaacaccggatacaacacatacatttagacactgatagtaatttaagaaaatataa |
25792324 |
T |
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| Q |
112 |
gtgaatcagtgattgaaagtaa-------------------tcaaacattgacatgtgtcggacaccagacccatctttaatgtgaagtgtcggtgctat |
192 |
Q |
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| T |
25792325 |
gtgaatcagtgattgaaagtaaccacgcacacgtgtcaatatcagacattgacatgtgtcggacaccagacacat-tttaatgtgaagtgtcggtgctac |
25792423 |
T |
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| Q |
193 |
atactaatcgataggtgttatgtgtatggcaaagtatgtggaccaatatgaaatatgattgtagttatatacataccatg |
272 |
Q |
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|||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25792424 |
atactaattgataggtgttatgtgtatggcaaaatatgtggaccaatatgaaatatgattgtagttatatacataccatg |
25792503 |
T |
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