View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7044_low_4 (Length: 384)

Name: NF7044_low_4
Description: NF7044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7044_low_4
NF7044_low_4
[»] chr6 (31 HSPs)
chr6 (1-369)||(6909847-6910216)
chr6 (185-303)||(24626207-24626324)
chr6 (255-324)||(34430481-34430550)
chr6 (171-325)||(6538415-6538563)
chr6 (256-324)||(6536597-6536665)
chr6 (249-324)||(26694853-26694928)
chr6 (251-324)||(837236-837309)
chr6 (199-324)||(35098961-35099087)
chr6 (248-324)||(9093576-9093652)
chr6 (253-305)||(11784069-11784121)
chr6 (171-277)||(30926436-30926536)
chr6 (249-324)||(415279-415354)
chr6 (250-324)||(20368200-20368274)
chr6 (248-324)||(4006688-4006764)
chr6 (185-303)||(8147615-8147731)
chr6 (269-324)||(835269-835324)
chr6 (258-321)||(31812036-31812099)
chr6 (253-314)||(8201212-8201273)
chr6 (248-320)||(2735043-2735115)
chr6 (248-324)||(13907559-13907635)
chr6 (249-324)||(836561-836636)
chr6 (177-228)||(29754194-29754245)
chr6 (172-234)||(14164022-14164083)
chr6 (177-240)||(18610972-18611037)
chr6 (171-240)||(35070733-35070803)
chr6 (177-210)||(10401141-10401174)
chr6 (248-301)||(28621153-28621206)
chr6 (256-324)||(2206572-2206640)
chr6 (196-240)||(30536661-30536705)
chr6 (272-324)||(31624088-31624140)
chr6 (272-304)||(33067156-33067188)
[»] chr2 (60 HSPs)
chr2 (162-324)||(41241152-41241313)
chr2 (172-323)||(41851434-41851584)
chr2 (182-324)||(12464493-12464634)
chr2 (171-324)||(33319832-33319985)
chr2 (190-324)||(45229429-45229561)
chr2 (171-291)||(41407199-41407319)
chr2 (183-279)||(42659216-42659311)
chr2 (171-319)||(32592485-32592631)
chr2 (248-324)||(1625874-1625950)
chr2 (257-324)||(29628763-29628830)
chr2 (250-324)||(40279173-40279247)
chr2 (248-324)||(18066102-18066178)
chr2 (249-324)||(26626848-26626923)
chr2 (249-312)||(33941884-33941947)
chr2 (248-321)||(2142627-2142701)
chr2 (248-324)||(1810639-1810714)
chr2 (248-324)||(11513872-11513948)
chr2 (161-233)||(31561863-31561935)
chr2 (177-232)||(11863835-11863890)
chr2 (156-324)||(26201911-26202078)
chr2 (180-239)||(41293264-41293323)
chr2 (254-324)||(680483-680553)
chr2 (171-271)||(42868534-42868633)
chr2 (248-321)||(3611200-3611273)
chr2 (161-234)||(22971626-22971699)
chr2 (252-305)||(39073728-39073781)
chr2 (248-297)||(41407049-41407098)
chr2 (248-285)||(43199852-43199889)
chr2 (170-324)||(43279549-43279700)
chr2 (248-324)||(12313193-12313269)
chr2 (277-321)||(31561765-31561809)
chr2 (257-305)||(33931609-33931657)
chr2 (248-324)||(42457922-42457998)
chr2 (252-291)||(10490607-10490646)
chr2 (248-291)||(10494642-10494685)
chr2 (255-314)||(11201412-11201471)
chr2 (261-324)||(20952342-20952405)
chr2 (172-222)||(10258575-10258625)
chr2 (248-286)||(36114581-36114619)
chr2 (270-324)||(40279263-40279317)
chr2 (270-324)||(40279333-40279387)
chr2 (270-324)||(40279403-40279457)
chr2 (196-315)||(41812120-41812237)
chr2 (248-302)||(43199388-43199442)
chr2 (274-324)||(43985023-43985073)
chr2 (259-324)||(5759595-5759660)
chr2 (249-314)||(8017409-8017474)
chr2 (248-289)||(9750920-9750961)
chr2 (248-296)||(15757706-15757755)
chr2 (248-321)||(36114393-36114466)
chr2 (252-313)||(39659540-39659601)
chr2 (43-88)||(41796073-41796118)
chr2 (249-302)||(43911041-43911094)
chr2 (248-324)||(4026791-4026867)
chr2 (253-324)||(12289775-12289847)
chr2 (255-307)||(25800810-25800862)
chr2 (276-324)||(26143660-26143708)
chr2 (252-324)||(29316795-29316867)
chr2 (248-288)||(42907333-42907373)
chr2 (248-296)||(44439408-44439456)
[»] chr3 (55 HSPs)
chr3 (177-324)||(53789481-53789627)
chr3 (171-324)||(35959476-35959628)
chr3 (171-311)||(30956659-30956798)
chr3 (171-311)||(30972471-30972610)
chr3 (185-321)||(583958-584093)
chr3 (167-321)||(20880371-20880523)
chr3 (167-324)||(3845582-3845738)
chr3 (200-321)||(18405854-18405975)
chr3 (248-324)||(21367641-21367717)
chr3 (250-324)||(30443869-30443943)
chr3 (248-321)||(14145886-14145959)
chr3 (248-320)||(36631075-36631147)
chr3 (253-324)||(47132310-47132381)
chr3 (250-324)||(46778211-46778284)
chr3 (252-321)||(44061046-44061115)
chr3 (166-323)||(2719362-2719517)
chr3 (252-324)||(39980707-39980779)
chr3 (249-324)||(28622019-28622094)
chr3 (253-311)||(12862281-12862338)
chr3 (248-286)||(20257509-20257547)
chr3 (187-286)||(37689147-37689243)
chr3 (167-286)||(20170417-20170535)
chr3 (261-314)||(22203417-22203470)
chr3 (251-324)||(46886712-46886785)
chr3 (248-324)||(402562-402638)
chr3 (178-234)||(46778336-46778392)
chr3 (265-324)||(44747428-44747487)
chr3 (248-314)||(33405197-33405263)
chr3 (248-314)||(36189540-36189606)
chr3 (252-314)||(49034293-49034355)
chr3 (248-324)||(1816557-1816633)
chr3 (253-321)||(16073066-16073134)
chr3 (248-324)||(25348815-25348891)
chr3 (248-300)||(25447288-25447340)
chr3 (264-324)||(26990511-26990571)
chr3 (253-285)||(31365359-31365391)
chr3 (248-304)||(35127411-35127467)
chr3 (171-214)||(35127490-35127533)
chr3 (248-290)||(849636-849678)
chr3 (257-291)||(11492596-11492630)
chr3 (186-240)||(19983693-19983747)
chr3 (250-304)||(31106153-31106207)
chr3 (250-300)||(32095235-32095285)
chr3 (274-324)||(36887504-36887554)
chr3 (171-228)||(1508696-1508753)
chr3 (248-321)||(21335649-21335722)
chr3 (217-324)||(39602230-39602335)
chr3 (43-88)||(43526492-43526537)
chr3 (257-302)||(47587451-47587496)
chr3 (182-222)||(139794-139834)
chr3 (178-230)||(466107-466159)
chr3 (248-304)||(19679368-19679424)
chr3 (48-88)||(24627464-24627504)
chr3 (252-324)||(26878095-26878167)
chr3 (264-324)||(36507111-36507171)
[»] chr7 (59 HSPs)
chr7 (190-366)||(4970772-4970941)
chr7 (248-324)||(17944363-17944439)
chr7 (190-318)||(30570957-30571084)
chr7 (248-366)||(33601390-33601505)
chr7 (177-291)||(46078051-46078166)
chr7 (248-324)||(46280292-46280368)
chr7 (249-321)||(47177611-47177683)
chr7 (248-319)||(15309590-15309661)
chr7 (253-368)||(33602005-33602117)
chr7 (250-324)||(48507698-48507773)
chr7 (249-323)||(40252128-40252202)
chr7 (248-314)||(40377882-40377948)
chr7 (256-324)||(420342-420410)
chr7 (252-324)||(39907781-39907853)
chr7 (249-324)||(20269551-20269626)
chr7 (256-319)||(34744010-34744073)
chr7 (248-314)||(12110334-12110400)
chr7 (250-324)||(20881656-20881730)
chr7 (197-324)||(39279887-39280012)
chr7 (248-321)||(20526420-20526493)
chr7 (213-291)||(119850-119927)
chr7 (248-324)||(22283764-22283840)
chr7 (248-324)||(27863745-27863821)
chr7 (248-324)||(33678754-33678830)
chr7 (248-320)||(43694594-43694666)
chr7 (248-324)||(44821933-44822009)
chr7 (248-324)||(45790445-45790521)
chr7 (253-324)||(19022605-19022676)
chr7 (177-279)||(45263997-45264100)
chr7 (250-313)||(48470020-48470083)
chr7 (171-291)||(45806530-45806649)
chr7 (251-324)||(37064484-37064557)
chr7 (167-228)||(38500033-38500094)
chr7 (249-314)||(38639989-38640054)
chr7 (259-324)||(43648225-43648290)
chr7 (171-223)||(3308372-3308424)
chr7 (252-296)||(19302607-19302651)
chr7 (249-319)||(17248530-17248598)
chr7 (185-240)||(21568731-21568786)
chr7 (253-324)||(33673056-33673127)
chr7 (248-291)||(34083578-34083621)
chr7 (171-324)||(38138499-38138651)
chr7 (253-324)||(45338428-45338498)
chr7 (249-319)||(5569661-5569731)
chr7 (248-286)||(13960890-13960928)
chr7 (256-302)||(19718989-19719034)
chr7 (252-314)||(20258490-20258552)
chr7 (248-314)||(30456480-30456546)
chr7 (274-324)||(47130805-47130855)
chr7 (276-322)||(48917368-48917414)
chr7 (248-305)||(8960666-8960723)
chr7 (168-209)||(20881760-20881801)
chr7 (177-234)||(33128661-33128718)
chr7 (249-302)||(39279738-39279791)
chr7 (248-321)||(40689009-40689082)
chr7 (43-75)||(31512035-31512067)
chr7 (252-324)||(31744287-31744359)
chr7 (250-290)||(31771703-31771743)
chr7 (248-324)||(39967894-39967970)
[»] chr4 (60 HSPs)
chr4 (171-314)||(50681119-50681261)
chr4 (250-321)||(17822888-17822959)
chr4 (179-324)||(55414440-55414584)
chr4 (185-284)||(22030116-22030213)
chr4 (161-286)||(41336649-41336772)
chr4 (248-324)||(51630085-51630161)
chr4 (248-324)||(53294134-53294210)
chr4 (259-321)||(16200004-16200066)
chr4 (258-324)||(21731676-21731742)
chr4 (248-324)||(3155577-3155653)
chr4 (248-324)||(17884042-17884118)
chr4 (248-324)||(54392839-54392915)
chr4 (248-314)||(9760414-9760480)
chr4 (178-314)||(17204043-17204178)
chr4 (248-314)||(56480322-56480388)
chr4 (171-305)||(18425711-18425843)
chr4 (171-228)||(24169159-24169216)
chr4 (248-305)||(27043869-27043926)
chr4 (171-286)||(25904268-25904386)
chr4 (171-324)||(29912847-29912998)
chr4 (248-323)||(437265-437340)
chr4 (250-305)||(42685400-42685455)
chr4 (249-324)||(47118985-47119060)
chr4 (250-324)||(7694030-7694104)
chr4 (257-323)||(8422860-8422926)
chr4 (250-324)||(35571651-35571725)
chr4 (258-324)||(42121472-42121538)
chr4 (251-324)||(1407933-1408006)
chr4 (255-304)||(2996554-2996603)
chr4 (255-324)||(19395136-19395205)
chr4 (161-210)||(23277311-23277360)
chr4 (43-88)||(52707572-52707617)
chr4 (250-324)||(55064809-55064885)
chr4 (248-300)||(25885833-25885885)
chr4 (248-324)||(28300319-28300395)
chr4 (252-324)||(29388592-29388664)
chr4 (277-352)||(30668360-30668433)
chr4 (248-324)||(35064829-35064905)
chr4 (248-324)||(44138533-44138609)
chr4 (248-300)||(52746884-52746936)
chr4 (261-304)||(16494845-16494888)
chr4 (256-319)||(41512633-41512696)
chr4 (257-312)||(49940023-49940078)
chr4 (252-291)||(54069470-54069509)
chr4 (248-314)||(7601733-7601799)
chr4 (258-324)||(13126629-13126694)
chr4 (262-324)||(39691163-39691225)
chr4 (258-291)||(2465972-2466005)
chr4 (255-324)||(7839381-7839450)
chr4 (163-204)||(21731782-21731823)
chr4 (198-305)||(31076425-31076531)
chr4 (273-321)||(2111073-2111121)
chr4 (255-291)||(23277405-23277441)
chr4 (188-240)||(43505871-43505923)
chr4 (284-324)||(44249295-44249335)
chr4 (250-290)||(47946174-47946214)
chr4 (256-324)||(49202627-49202695)
chr4 (248-324)||(49219113-49219189)
chr4 (248-324)||(50004164-50004240)
chr4 (264-324)||(50662758-50662818)
[»] chr1 (80 HSPs)
chr1 (189-305)||(27976511-27976626)
chr1 (185-324)||(51688617-51688754)
chr1 (171-324)||(41195213-41195366)
chr1 (208-324)||(24915071-24915186)
chr1 (171-305)||(41505585-41505717)
chr1 (251-366)||(1432492-1432605)
chr1 (252-319)||(3234040-3234107)
chr1 (185-275)||(2295016-2295100)
chr1 (248-324)||(7218094-7218170)
chr1 (248-324)||(27820357-27820433)
chr1 (252-319)||(17603409-17603476)
chr1 (261-324)||(45975677-45975740)
chr1 (250-324)||(7472287-7472361)
chr1 (153-210)||(15784224-15784282)
chr1 (212-324)||(47432035-47432145)
chr1 (254-324)||(51695515-51695585)
chr1 (248-324)||(2294885-2294961)
chr1 (171-324)||(14576674-14576825)
chr1 (252-304)||(23445312-23445364)
chr1 (248-324)||(34290210-34290286)
chr1 (248-324)||(37769680-37769756)
chr1 (248-324)||(38018384-38018460)
chr1 (248-320)||(49888741-49888813)
chr1 (261-324)||(7137018-7137081)
chr1 (171-234)||(17830052-17830115)
chr1 (248-299)||(37295763-37295814)
chr1 (171-233)||(5741560-5741622)
chr1 (248-314)||(46225763-46225829)
chr1 (248-324)||(1509985-1510061)
chr1 (248-321)||(13809972-13810045)
chr1 (248-324)||(27970314-27970391)
chr1 (248-324)||(473138-473214)
chr1 (250-305)||(3069973-3070029)
chr1 (248-324)||(10809319-10809395)
chr1 (248-304)||(25006074-25006130)
chr1 (248-324)||(34952189-34952265)
chr1 (248-324)||(37842375-37842451)
chr1 (186-319)||(42174770-42174900)
chr1 (171-233)||(5720879-5720941)
chr1 (257-299)||(12287237-12287279)
chr1 (250-291)||(6556947-6556988)
chr1 (161-210)||(11893084-11893133)
chr1 (248-281)||(15477552-15477585)
chr1 (248-324)||(10799436-10799512)
chr1 (171-231)||(14331687-14331747)
chr1 (248-308)||(17778932-17778991)
chr1 (248-324)||(29793756-29793832)
chr1 (248-324)||(31517760-31517836)
chr1 (248-296)||(38578501-38578549)
chr1 (273-324)||(6102153-6102204)
chr1 (261-324)||(14331970-14332032)
chr1 (186-229)||(24552454-24552497)
chr1 (273-324)||(26779945-26779996)
chr1 (261-324)||(49938734-49938797)
chr1 (256-314)||(7244688-7244746)
chr1 (274-324)||(12564519-12564569)
chr1 (171-221)||(17834158-17834208)
chr1 (248-286)||(30581776-30581814)
chr1 (249-291)||(33186241-33186283)
chr1 (258-324)||(36872716-36872782)
chr1 (254-324)||(37631579-37631649)
chr1 (255-324)||(7107537-7107606)
chr1 (251-288)||(11218001-11218038)
chr1 (267-324)||(14629986-14630043)
chr1 (267-324)||(25479574-25479631)
chr1 (259-324)||(35590912-35590977)
chr1 (185-234)||(37473311-37473360)
chr1 (248-305)||(37517233-37517290)
chr1 (171-224)||(38247351-38247404)
chr1 (255-304)||(39596578-39596627)
chr1 (253-286)||(42391344-42391377)
chr1 (183-277)||(44932002-44932092)
chr1 (256-324)||(1510330-1510398)
chr1 (248-324)||(4576779-4576855)
chr1 (248-304)||(17269224-17269280)
chr1 (262-298)||(28287798-28287834)
chr1 (248-296)||(30581996-30582044)
chr1 (185-233)||(42391278-42391326)
chr1 (262-310)||(42556665-42556713)
chr1 (248-324)||(51160509-51160585)
[»] chr8 (48 HSPs)
chr8 (201-324)||(25930574-25930696)
chr8 (171-323)||(29168078-29168224)
chr8 (185-324)||(27028751-27028881)
chr8 (250-314)||(29205784-29205848)
chr8 (171-296)||(10758304-10758428)
chr8 (153-305)||(42043384-42043536)
chr8 (177-324)||(12976117-12976262)
chr8 (182-296)||(38750267-38750380)
chr8 (171-320)||(1058100-1058246)
chr8 (248-317)||(38648325-38648394)
chr8 (248-324)||(37353269-37353345)
chr8 (274-324)||(9956834-9956884)
chr8 (250-324)||(18133632-18133706)
chr8 (250-304)||(24558829-24558883)
chr8 (248-291)||(16734003-16734046)
chr8 (177-240)||(32975964-32976027)
chr8 (178-302)||(8146229-8146358)
chr8 (261-311)||(32841341-32841391)
chr8 (250-320)||(38602309-38602379)
chr8 (251-324)||(10120733-10120806)
chr8 (248-320)||(35534637-35534707)
chr8 (248-324)||(16210906-16210982)
chr8 (248-324)||(26771239-26771315)
chr8 (258-322)||(30251476-30251540)
chr8 (256-324)||(43504733-43504801)
chr8 (258-305)||(12010870-12010917)
chr8 (173-228)||(37945489-37945544)
chr8 (262-324)||(8062317-8062379)
chr8 (201-314)||(11861735-11861844)
chr8 (248-314)||(14242886-14242952)
chr8 (262-324)||(34290857-34290919)
chr8 (158-228)||(38353235-38353305)
chr8 (194-239)||(4526360-4526405)
chr8 (255-320)||(6881908-6881972)
chr8 (255-300)||(9834833-9834878)
chr8 (171-228)||(14956410-14956467)
chr8 (253-314)||(16736063-16736124)
chr8 (267-324)||(28769359-28769416)
chr8 (251-304)||(29891061-29891114)
chr8 (171-216)||(31916523-31916568)
chr8 (248-304)||(6509343-6509399)
chr8 (248-300)||(7918817-7918869)
chr8 (248-324)||(21653055-21653131)
chr8 (48-88)||(28710063-28710103)
chr8 (48-88)||(28717410-28717450)
chr8 (40-88)||(41314296-41314344)
chr8 (183-215)||(41442553-41442585)
chr8 (261-321)||(43717960-43718020)
[»] chr5 (62 HSPs)
chr5 (171-324)||(25460990-25461141)
chr5 (250-324)||(10272451-10272525)
chr5 (178-324)||(16457999-16458143)
chr5 (169-305)||(31038195-31038325)
chr5 (169-305)||(31047419-31047549)
chr5 (248-324)||(12425545-12425621)
chr5 (252-324)||(16937903-16937975)
chr5 (171-305)||(31051796-31051924)
chr5 (249-296)||(12554494-12554541)
chr5 (250-321)||(39105440-39105511)
chr5 (186-321)||(10639866-10640000)
chr5 (248-324)||(32703296-32703370)
chr5 (256-324)||(25461336-25461404)
chr5 (252-324)||(29925819-29925891)
chr5 (171-305)||(32372522-32372655)
chr5 (248-315)||(17652235-17652302)
chr5 (261-324)||(36318761-36318824)
chr5 (261-324)||(43300865-43300928)
chr5 (186-240)||(3735594-3735648)
chr5 (249-321)||(2568632-2568705)
chr5 (166-231)||(7319123-7319188)
chr5 (171-321)||(24030424-24030574)
chr5 (171-232)||(26005349-26005410)
chr5 (261-314)||(32942605-32942658)
chr5 (248-324)||(7319380-7319456)
chr5 (248-324)||(7674622-7674698)
chr5 (272-324)||(7984967-7985019)
chr5 (250-314)||(32009668-32009732)
chr5 (261-324)||(7907868-7907931)
chr5 (171-234)||(25461864-25461927)
chr5 (261-324)||(36325998-36326061)
chr5 (250-313)||(42646891-42646954)
chr5 (256-322)||(6587129-6587195)
chr5 (248-322)||(9202770-9202844)
chr5 (250-324)||(17368652-17368726)
chr5 (171-319)||(25461672-25461818)
chr5 (252-314)||(34102344-34102406)
chr5 (275-324)||(4014444-4014493)
chr5 (177-314)||(40438983-40439121)
chr5 (158-234)||(1130854-1130930)
chr5 (259-319)||(28776978-28777038)
chr5 (248-300)||(34205213-34205265)
chr5 (171-219)||(36797200-36797248)
chr5 (260-303)||(443921-443964)
chr5 (250-289)||(3520360-3520399)
chr5 (217-310)||(34736561-34736652)
chr5 (253-299)||(5559704-5559750)
chr5 (281-323)||(7319029-7319071)
chr5 (258-324)||(18543217-18543282)
chr5 (258-324)||(23994736-23994802)
chr5 (180-210)||(28776892-28776922)
chr5 (255-285)||(29815146-29815176)
chr5 (254-324)||(35445863-35445933)
chr5 (248-325)||(42582707-42582789)
chr5 (248-321)||(40426739-40426812)
chr5 (248-321)||(41981888-41981961)
chr5 (248-324)||(1465040-1465115)
chr5 (250-314)||(2563186-2563250)
chr5 (192-232)||(17652172-17652212)
chr5 (248-304)||(18857440-18857496)
chr5 (273-305)||(36145277-36145309)
chr5 (248-324)||(42583123-42583199)
[»] scaffold0528 (1 HSPs)
scaffold0528 (169-305)||(1011-1141)
[»] scaffold0018 (2 HSPs)
scaffold0018 (171-239)||(158005-158073)
scaffold0018 (248-324)||(178345-178421)
[»] scaffold0475 (1 HSPs)
scaffold0475 (248-285)||(11814-11851)
[»] scaffold0167 (1 HSPs)
scaffold0167 (273-310)||(17275-17312)
[»] scaffold0024 (1 HSPs)
scaffold0024 (248-301)||(27550-27603)


Alignment Details
Target: chr6 (Bit Score: 321; Significance: 0; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 6910216 - 6909847
Alignment:
Q  1 gagataaaattttgagcttatatttttcttacatgcttgtgactctatttggtaaaaa-tagcagatagttgataacttagcttatagcgaatggactta 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6910216 gagataaaattttgagcttatatttttcttacatgcttatgactctatttggtaaaaaatagcagatagttgataacttagcttatagcgaatggactta 6910117  T
Q  100 taaaggatagatgaaaaacatagtttatatagcagataagctagctgattgaaccctgtttgataaacagtttatatcacaagcacttatcatgataagt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6910116 taaaggatagatgaaaaacatagtttatatagcagataagctagctgattgaaccctgtttgataaacagtttatatcacaagcacttatcatgataagt 6910017  T
Q  200 gcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatctt 299  Q
    |||||||||||  ||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6910016 gcttatgtataaacttacataagctatttctataggaaaagaaaaaaataaagttaaattgtttttgtatatgctataagttgttttcataacatatctt 6909917  T
Q  300 ggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagttttt 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6909916 ggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcacaagcttattttcataagttttt 6909847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 24626207 - 24626324
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 284  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||||||||| |        ||||||||||||||||||||||| ||||||||||||    
T  24626207 cttatcatgatgattgcttatgtataagcttacataagctatttctataggaaaggataaaac-aaagttaaattgtttttgtatattctataagttgtt 24626305  T
Q  285 ttcataacctatcttggag 303  Q
    ||||||| |||||||||||    
T  24626306 ttcataagctatcttggag 24626324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 34430550 - 34430481
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||||| |||||||||    
T  34430550 aaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaa 34430481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 325
Target Start/End: Original strand, 6538415 - 6538563
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||||||||| |||||||| ||||||||||| |||| |||||| || || | ||| |||||       ||| |||||||||||| ||||||    
T  6538415 ttatagcacaagcacttataatgataagcgcttatgtataagcttgcataagttagttttttagcaaaaga------taatgttaaattgtttatgtata 6538508  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaat 325  Q
    |||||||||||||||| |||  |||| |||||||| |||| ||| |||| |||||    
T  6538509 tgctataagttgtttttataggctatattggagaacttattaaaataagttgaat 6538563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 6536597 - 6536665
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||||||||||| | || |||| ||||||||||||||||| |||| ||||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaa 6536665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 26694853 - 26694928
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||  ||||||| ||||| |||||||||||| |||||||| |||| |||||||| |||||||||    
T  26694853 aaagttaaattgtttccgtatatgttataaattgttttcataaactatcttgaagaacttatgaaaataagctgaa 26694928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 837309 - 837236
Alignment:
Q  251 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||| || || ||||||||| |||||||| | ||||||||||||| |||||||| |||||||||    
T  837309 agttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaa 837236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 199 - 324
Target Start/End: Original strand, 35098961 - 35099087
Alignment:
Q  199 tgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaa-gttaaattgtttttgtatatgctataagttgttttcataacctatc 297  Q
    |||||||||||| |||||  |||||||||||||||||||||         ||  ||| ||||||||||||||||| |||||||||||||||||| |||||    
T  35098961 tgcttatgtataagcttaagtaagctatttctataggaaaaaaaataaaaaattgtttaattgtttttgtatatgttataagttgttttcataagctatc 35099060  T
Q  298 ttggagaatttatgaaattaagctgaa 324  Q
    || ||| |||| ||||| |||| ||||    
T  35099061 ttagagtatttttgaaaataagttgaa 35099087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 9093652 - 9093576
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||| || |||| ||||| ||| |||| |||||||||    
T  9093652 taaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaa 9093576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 11784121 - 11784069
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  11784121 ttaaattgtttttgtatatgctataagctgttttcataagctatattggagaa 11784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 277
Target Start/End: Original strand, 30926436 - 30926536
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||  ||||||||||||||   ||| ||||| ||||||||||||||||||||||| |||||       |||||||||||||||||||| ||    
T  30926436 ttatagcacaagggcttatcatgataagcaattaagtataagcttacataagctatttctatagtaaaag------ataaagttaaattgtttttgtgta 30926529  T
Q  271 tgctata 277  Q
    |||||||    
T  30926530 tgctata 30926536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 415279 - 415354
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||| ||||| ||||||||||||||| |||| ||||  ||||||| ||||| ||| ||||||||    
T  415279 aaagttaaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaa 415354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 20368274 - 20368200
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||| ||||||||||||||  | |||||||||||||||||| || |||||||||| |||||||| |||| ||||    
T  20368274 aagttgaattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaa 20368200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 4006688 - 4006764
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| ||||||||||| |||| |||||||||||||||||||| |||||   ||||  |||||||| |||||||||    
T  4006688 taaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaa 4006764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 8147615 - 8147731
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 284  Q
    |||||||||||||| ||||| | ||| ||| ||||||||||||| ||||| |||||       ||||||| |||||||||||||||| ||| ||| ||||    
T  8147615 cttatcatgataagcgcttaagcataagct-acataagctatttttatagcaaaagataaaa-taaagttgaattgtttttgtatattctaaaagatgtt 8147712  T
Q  285 ttcataacctatcttggag 303  Q
    ||||||| |||| ||||||    
T  8147713 ttcataagctatattggag 8147731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 835324 - 835269
Alignment:
Q  269 tatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||  |||||||||| ||||||||||||| |||||||| |||||||||    
T  835324 tatgctataagcagttttcataagctatcttggagaacttatgaaaataagctgaa 835269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 31812099 - 31812036
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||| ||||||| | |||||||||||||||||| ||||||||||||  |||||||| ||||||    
T  31812099 ttgttattgtataagatataagttgttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 8201212 - 8201273
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||||||||| ||| |||||||||||||| ||||  ||| |||||||| ||||||||    
T  8201212 ttaaattgtttttgtgtatcctataagttgtttttataagttatgttggagaacttatgaaa 8201273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 2735043 - 2735115
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 320  Q
    |||||||||||| ||||||||||  ||||||| ||||||||||| | |||||| | || |||||||| |||||    
T  2735043 taaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagc 2735115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 13907559 - 13907635
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| ||  ||| |||||  ||||||||||||||||||| | ||||||||||| |||||||| ||| |||||    
T  13907559 taaagttaatttactttcgtataacctataagttgttttcataagccatcttggagaaattatgaaaataaactgaa 13907635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 836636 - 836561
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||| ||||  ||||| || ||| ||||||| ||||||||| ||| |||||||| | |||||||    
T  836636 aaagttaaattgttttggtatgagctattagctgtgttcataagctatcttggggaacttatgaaaatgagctgaa 836561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 29754245 - 29754194
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 228  Q
    ||||||| |||||||||||||| ||||||||||  |||| ||||||||||||    
T  29754245 cacaagcgcttatcatgataagcgcttatgtattagcttgcataagctattt 29754194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 14164022 - 14164083
Alignment:
Q  172 tatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 234  Q
    |||| ||||| ||||||||||||||| | |||||||||| ||||||||||| ||||| |||||    
T  14164022 tataacacaaacacttatcatgataa-tccttatgtataagcttacataagatatttttatag 14164083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 18610972 - 18611037
Alignment:
Q  177 cacaagcacttatcatgataagtgcttat--gtataggcttacataagctatttctataggaaaag 240  Q
    ||||||| ||||||||||||| |||||||  ||||| | |||||||| |||| |||||||||||||    
T  18610972 cacaagcgcttatcatgataattgcttatatgtataagattacataatctatatctataggaaaag 18611037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 35070803 - 35070733
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatg-tataggcttacataagctatttctataggaaaag 240  Q
    ||||| ||||||||||| ||||||||||  || ||| |||| ||||||||||||||||| ||||| |||||    
T  35070803 ttatagcacaagcacttgtcatgataagcactaatgctataagcttacataagctatttttatagaaaaag 35070733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 10401174 - 10401141
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtata 210  Q
    |||||||||||||||||||||| |||||||||||    
T  10401174 cacaagcacttatcatgataagcgcttatgtata 10401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 28621206 - 28621153
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgg 301  Q
    ||||||||||||||||||||||| |||| ||| ||||| ||||  |||||||||    
T  28621206 taaagttaaattgtttttgtataagctacaagatgtttacataggctatcttgg 28621153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 2206572 - 2206640
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| |||| ||||| |  ||||| ||||| |||||||||||| |||||  ||||||||||||    
T  2206572 aattgtttttatataagctatgaactgtttacataagctatcttggagagtttatagaattaagctgaa 2206640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 30536705 - 30536661
Alignment:
Q  196 aagtgcttatgtataggcttacataagctatttctataggaaaag 240  Q
    ||||||||||||||| |||| |||||||||||| ||||| |||||    
T  30536705 aagtgcttatgtataagcttgcataagctatttttatagcaaaag 30536661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 31624088 - 31624140
Alignment:
Q  272 gctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| ||||||||||  ||||||||||||| |||||||| |||| ||||    
T  31624088 gctataagctgttttcataggctatcttggagaaattatgaaaataagttgaa 31624140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 304
Target Start/End: Original strand, 33067156 - 33067188
Alignment:
Q  272 gctataagttgttttcataacctatcttggaga 304  Q
    |||||||||||||||||||| ||||||||||||    
T  33067156 gctataagttgttttcataagctatcttggaga 33067188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 324
Target Start/End: Complemental strand, 41241313 - 41241152
Alignment:
Q  162 ataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgt 261  Q
    |||||||  ||||| |||||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||       | ||||||||||||    
T  41241313 ataaacaacttatagcacaagcacttatcatgatatgcgcttatggataagcttacataagctatttctataggaaaag-ataaaatgaagttaaattgt 41241215  T
Q  262 ttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||| |||||| |||  ||||||||| || || |||||||||||||||    
T  41241214 ttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaagctgaa 41241152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 172 - 323
Target Start/End: Original strand, 41851434 - 41851584
Alignment:
Q  172 tatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatat 271  Q
    |||| ||||||| ||||||||| |||  |||||| |||| |||||||  || ||||| |||||||||||       ||||||||||||||||||||||||    
T  41851434 tatagcacaagcgcttatcatgctaaacgcttatatataagcttacacgagatatttatataggaaaagatacaa-taaagttaaattgtttttgtatat 41851532  T
Q  272 gctataagttgttttcataacctatcttggagaatttatgaaattaagctga 323  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  41851533 gctataagttgttttcagaagctatcttggagaatttatgaaattaagctga 41851584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 324
Target Start/End: Complemental strand, 12464634 - 12464493
Alignment:
Q  182 gcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagtt 281  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||||| ||| |||||       |||||||||||||||||||||||||||||||| |    
T  12464634 gcacttatcatgataagtgcatatgtagaagcttacataagctatttctgtagaaaaagataaaa-taaagttaaattgtttttgtatatgctataagct 12464536  T
Q  282 gttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
     ||||||||| ||||||||||||| || ||||| |||||||||    
T  12464535 attttcataagctatcttggagaacttgtgaaaataagctgaa 12464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 324
Target Start/End: Complemental strand, 33319985 - 33319832
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||| |||||| ||||||  ||||||||| | | |||||||| |||||| ||||| ||| |        ||||||||| ||||||||||||    
T  33319985 ttatagcacaagcgcttatcctgataatcgcttatgtaaaagtttacataaactatttttatagtaaatgataacataaaagttaaactgtttttgtata 33319886  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    | ||||||  ||||||||||| ||||||||||||| |||||||| |||||||||    
T  33319885 tactataaactgttttcataaactatcttggagaacttatgaaaataagctgaa 33319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 324
Target Start/End: Original strand, 45229429 - 45229561
Alignment:
Q  190 catgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcat 289  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| ||| |       | | ||||||||||||||||||||| ||| | ||||||||||    
T  45229429 catgataagtgcttatgtataagtttacataagctatttctatagcaaacgataaaa-tgaggttaaattgtttttgtatatgttatca-ttgttttcat 45229526  T
Q  290 aacctatcttggagaatttatgaaattaagctgaa 324  Q
    || ||||||| ||||| |||||||| |||||||||    
T  45229527 aagctatcttcgagaacttatgaaaataagctgaa 45229561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 41407199 - 41407319
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattg-tttttgtat 269  Q
    ||||| ||||||| ||||||||||||||  |||||||||| ||||||||||||||||||| ||  |||||       ||||||||||||| |||||||||    
T  41407199 ttatagcacaagcgcttatcatgataagcacttatgtataagcttacataagctatttctgtaccaaaag-ataaaataaagttaaattgttttttgtat 41407297  T
Q  270 atgctataagttgttttcataa 291  Q
    |||||||||||| |||| ||||    
T  41407298 atgctataagttatttttataa 41407319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 42659311 - 42659216
Alignment:
Q  183 cacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataag 279  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||        |||||| |||||||||||||||||||||||||    
T  42659311 cacttatcatgataagcgcttatgtataagcttacataagctatttttat-ggaaaatggtaaaataaagtgaaattgtttttgtatatgctataag 42659216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 319
Target Start/End: Original strand, 32592485 - 32592631
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||| |||||||||| ||||| ||||||||||| |||| ||||| |||||| ||||| |||||       ||| ||||||||| |||||||||    
T  32592485 ttatagcacaaacacttatcattataagcgcttatgtataagcttgcataaactatttttatagaaaaag-ataaaataatgttaaattg-ttttgtata 32592582  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
     ||||||||||||||| |||| | || |||||||| |||||||| ||||    
T  32592583 cgctataagttgtttttataagcaatattggagaacttatgaaaataag 32592631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 1625874 - 1625950
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||| ||| |||| | |||||||    
T  1625874 taaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaa 1625950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 29628830 - 29628763
Alignment:
Q  257 attgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||| |||||||| || |||||||||    
T  29628830 attgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaa 29628763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 40279173 - 40279247
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||| ||||| | |||||||||||||||||| |||| |||||||| |||||||| | |||||||    
T  40279173 aagttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaa 40279247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 18066102 - 18066178
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||  |||| |||||||| ||||||||||| ||||||||||||| ||| |||| |||| ||||    
T  18066102 taaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaa 18066178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 26626848 - 26626923
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||| ||||| |||| ||| ||||||||||| |||||||| |||| |||||||| ||| |||||    
T  26626848 aaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaa 26626923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 33941884 - 33941947
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatga 312  Q
    ||||| |||||||||||||||| | ||||| |||||||||||| |||||||||||| |||||||    
T  33941884 aaagtaaaattgtttttgtataagttataacttgttttcataagctatcttggagagtttatga 33941947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 2142627 - 2142701
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatctt-ggagaatttatgaaattaagct 321  Q
    ||||| || ||| |||||||||| ||||||||||||||||||||  |||||| ||||||||||||||| ||||||    
T  2142627 taaagctagattatttttgtataagctataagttgttttcataatttatcttgggagaatttatgaaaataagct 2142701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 1810639 - 1810714
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| |||||||||||||||||| | ||| ||||||||| |||| |||||||| ||| ||||||||| |||||||||    
T  1810639 taaatttaaattgtttttgtataagttat-agttgtttttataagctatcttgaagagtttatgaaaataagctgaa 1810714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 11513872 - 11513948
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| ||||||||||  |||| |||||||||||||||||||| ||||| ||||||| || || || |||||||||    
T  11513872 taaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaa 11513948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 31561935 - 31561863
Alignment:
Q  161 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctata 233  Q
    ||||||||| ||||| |||||||  ||||||||||||| |||||  |||| ||||||||||||||| ||||||    
T  31561935 gataaacagcttatagcacaagcgtttatcatgataagcgcttacatataagcttacataagctatatctata 31561863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 11863835 - 11863890
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctat 232  Q
    ||||| ||||| |||||||||| ||||||| ||| |||||||||||||||||||||    
T  11863835 cacaaacacttgtcatgataagcgcttatgcataagcttacataagctatttctat 11863890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 324
Target Start/End: Original strand, 26201911 - 26202078
Alignment:
Q  156 tgtttgataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagtta 255  Q
    |||| ||||||||  ||||| ||||||| ||||||||||||||  ||||| |||| |||| |||||||||||| ||||| |||         ||| ||||    
T  26201911 tgttggataaacaccttatagcacaagcgcttatcatgataagcccttatatataagcttgcataagctatttttatagcaaagagataaaataacgtta 26202010  T
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||| | | |||  |||||||||||||||| ||||  ||| |||||||| |||||||| |||| ||||    
T  26202011 aattggtctcgta-ctgctataagttgtttttataagatatattggagaacttatgaaaataagttgaa 26202078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 41293323 - 41293264
Alignment:
Q  180 aagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaa 239  Q
    |||||| ||||||||||||||||||||| || ||||||||||| || ||| |||||||||    
T  41293323 aagcacatatcatgataagtgcttatgtttaagcttacataagttacttcgataggaaaa 41293264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 680483 - 680553
Alignment:
Q  254 taaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| ||||| |||||||| | ||||||||| |||||||| |||| || ||||| |||||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaa 680553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 42868633 - 42868534
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||| |||||||||||| | ||||||| ||| | |||||||||||||||  |||| |||||       |||||||||||||||||||||||    
T  42868633 ttatagcacaagcgcttatcatgataggcgcttatgcataagtttacataagctattttcatagaaaaag-ataaaataaagttaaattgtttttgtata 42868535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 3611200 - 3611273
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    |||||||||||||||||||||||   ||||   |||||||| || ||||||||||||| |||||||| ||||||    
T  3611200 taaagttaaattgtttttgtatagtttatagactgttttcacaagctatcttggagaacttatgaaaataagct 3611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 22971699 - 22971626
Alignment:
Q  161 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 234  Q
    ||||||||  ||||| ||||| || |||| |||||||| |||| |||||| ||||| |||||||||||||||||    
T  22971699 gataaacaacttatagcacaaacatttattatgataagcgcttgtgtataagcttatataagctatttctatag 22971626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 39073781 - 39073728
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    |||||||||||||||||||||||||||||  |||| |||| |||| ||||||||    
T  39073781 gttaaattgtttttgtatatgctataagtaatttttataagctatattggagaa 39073728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 41407049 - 41407098
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatc 297  Q
    |||||||||| || |||||||||| ||||||||||||||||||| |||||    
T  41407049 taaagttaaactgcttttgtatattctataagttgttttcataagctatc 41407098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 43199889 - 43199852
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttt 285  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  43199889 taaagttaaattgtttttgtataagctataagttgttt 43199852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 324
Target Start/End: Complemental strand, 43279700 - 43279549
Alignment:
Q  170 tttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtat 269  Q
    |||||| | ||||||||||||||| |||| ||| || | || |||| |||||||||||| ||||  |||||       ||| || |||||||||||||||    
T  43279700 tttataactcaagcacttatcatgttaagcgctaatttctaagcttgcataagctatttttatatcaaaagataaaa-taatgtgaaattgtttttgtat 43279602  T
Q  270 atgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
      ||||||||||||||| |||| |||| |||||||| || ||||| |||| ||||    
T  43279601 --gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaa 43279549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 12313269 - 12313193
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| ||||||| || |||| || |||||| ||||| ||||||||||||  |||||||| |||| ||||    
T  12313269 taaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaa 12313193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 31561809 - 31561765
Alignment:
Q  277 aagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||    
T  31561809 aagttgttttcataacttatcttggagaacttatgaaagtaagct 31561765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 33931657 - 33931609
Alignment:
Q  257 attgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||    
T  33931657 attgtttttgtataagctataagctgttttcataagctattttggagaa 33931609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 42457922 - 42457998
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||| || ||| | || ||| ||||||| ||||||| |||||  ||||||| |||||||||    
T  42457922 taaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatgaaaataagctgaa 42457998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 10490607 - 10490646
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataa 291  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  10490607 gttaaattgtttctgtatatgctataaggtgttttcataa 10490646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 248 - 291
Target Start/End: Original strand, 10494642 - 10494685
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataa 291  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||    
T  10494642 taaagtgaaattgtttttgtttatggtataagttgttttcataa 10494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 11201471 - 11201412
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||||||||||| ||||||||||||||  ||  |||| |||||||| ||||||||    
T  11201471 aaattgtttttgtatatactataagttgtttttgtatactatattggagaacttatgaaa 11201412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 20952342 - 20952405
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||| |||||||||||||||||||| || | |||| |||||||| |||||||| |||| ||||    
T  20952342 tttttttatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaa 20952405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 10258575 - 10258625
Alignment:
Q  172 tatatcacaagcacttatcatgataagtgcttatgtataggcttacataag 222  Q
    |||||||||| ||||| |||||| ||||||||||||||| | |||||||||    
T  10258575 tatatcacaaacacttctcatgacaagtgcttatgtataaggttacataag 10258625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 36114619 - 36114581
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgtttt 286  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  36114619 taaagttaaattgtttttgtataagcaataagttgtttt 36114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 40279263 - 40279317
Alignment:
Q  270 atgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||||||||| |||| |||||||| |||||||| | |||||||    
T  40279263 atgccataagttgttttcataagctatattggagaacttatgaaaattagctgaa 40279317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 40279333 - 40279387
Alignment:
Q  270 atgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||||||||| |||| |||||||| |||||||| | |||||||    
T  40279333 atgccataagttgttttcataagctatattggagaacttatgaaaattagctgaa 40279387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 40279403 - 40279457
Alignment:
Q  270 atgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||||||||| |||| |||||||| |||||||| |||| ||||    
T  40279403 atgccataagttgttttcataagctatattggagaacttatgaaaataagttgaa 40279457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 315
Target Start/End: Complemental strand, 41812237 - 41812120
Alignment:
Q  196 aagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataaccta 295  Q
    ||||| ||||||||| ||||||||||||||||| ||| || |||        | |||||||||||||||||||||||||| ||| || ||||| || |||    
T  41812237 aagtgattatgtataagcttacataagctatttttat-ggcaaatggtaaaatgaagttaaattgtttttgtatatgctacaagatg-tttcaaaagcta 41812140  T
Q  296 tcttggagaatttatgaaat 315  Q
    ||||||| || ||| |||||    
T  41812139 tcttggaaaacttaggaaat 41812120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 43199388 - 43199442
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgga 302  Q
    |||||||||||| | || ||||| |||||||||||||||||||| ||||| ||||    
T  43199388 taaagttaaattatcttcgtataagctataagttgttttcataaactatcctgga 43199442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 43985073 - 43985023
Alignment:
Q  274 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||| |||||||| |||  |||||||| |||||||||    
T  43985073 tataagttgttttcataagctatcttgaagagcttatgaaaataagctgaa 43985023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 5759660 - 5759595
Alignment:
Q  259 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| |||||||||||||| ||||||||||| ||||  |||||  ||| ||||| |||||||||    
T  5759660 tgttttcgtatatgctataagctgttttcataagctattctggagggtttgtgaaaataagctgaa 5759595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 8017409 - 8017474
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||||| ||||  |||| ||| |||  ||||||||||| ||||||||||||| ||||||||    
T  8017409 aaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaa 8017474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 289
Target Start/End: Original strand, 9750920 - 9750961
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcat 289  Q
    |||||||||||||||||  |||| ||||||||||||||||||    
T  9750920 taaagttaaattgttttcttataagctataagttgttttcat 9750961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 15757755 - 15757706
Alignment:
Q  248 taaagttaaattgttttt-gtatatgctataagttgttttcataacctat 296  Q
    |||||||||||||||||| |||||||||||||||||| || |||| ||||    
T  15757755 taaagttaaattgttttttgtatatgctataagttgtatttataagctat 15757706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 36114393 - 36114466
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||||||||||||  |||| || | | |||||||| ||||||||||||  |||| ||| ||||||    
T  36114393 taaagttaaattgtttttgtattagctaaaaataggtttcataagctatcttggagatcttataaaaataagct 36114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 39659601 - 39659540
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaa 313  Q
    |||||||||||||||| |||| ||||| ||||||| |||| |||| || ||||| |||||||    
T  39659601 gttaaattgtttttgtctatgttataacttgtttttataagctatattagagaacttatgaa 39659540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 41796073 - 41796118
Alignment:
Q  43 ctctatttggtaaaaatagcagatagttgataacttagcttatagc 88  Q
    |||| ||||||||||||||||||||| |||||| |||||| |||||    
T  41796073 ctctgtttggtaaaaatagcagatagctgataagttagctgatagc 41796118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 43911094 - 43911041
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgga 302  Q
    |||||||||||||||  ||||| || |||||||||||||| || ||||||||||    
T  43911094 aaagttaaattgtttccgtataagccataagttgttttcaaaagctatcttgga 43911041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 4026791 - 4026867
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| |||||| |||   |||||| |||||||||||  |||| || |||| |||||||| |||||||||    
T  4026791 taaagttaaattatttttgcataaattataagctgttttcataaattatcctgaagaacttatgaaaataagctgaa 4026867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 12289775 - 12289847
Alignment:
Q  253 ttaaattgtttttg-tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||| || ||| ||||||||||||| ||||  ||| |||||||| |||||||| |||| ||||    
T  12289775 ttaaattgtttttggtacatgttataagttgtttttataatttatattggagaacttatgaaaataagttgaa 12289847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 25800810 - 25800862
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatt 307  Q
    ||||||||||  |||| |||||||| ||||||||||| |||||||| ||||||    
T  25800810 aaattgttttcatataagctataagctgttttcataagctatcttgaagaatt 25800862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 26143708 - 26143660
Alignment:
Q  276 taagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||| ||| ||||||||| |||||||| |||||||||    
T  26143708 taagctgttttcataagctaacttggagaacttatgaaaataagctgaa 26143660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 29316867 - 29316795
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||   |||  ||||||| ||||||||| | ||||||||||||| ||||| || |||||||||    
T  29316867 gttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaa 29316795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 42907333 - 42907373
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttca 288  Q
    ||||||||||||||||| || || |||||||||||||||||    
T  42907333 taaagttaaattgttttcgtttaagctataagttgttttca 42907373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 44439456 - 44439408
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctat 296  Q
    |||||||||| |||||||||||| ||||||| ||||||| |||| ||||    
T  44439456 taaagttaaactgtttttgtataagctataaattgtttttataagctat 44439408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 177 - 324
Target Start/End: Complemental strand, 53789627 - 53789481
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctat 276  Q
    ||||||| ||||||||||||||  ||||||| || |||||||||||||||||||||||||||||       |||| ||||| |||||| |||||||||||    
T  53789627 cacaagcgcttatcatgataagcacttatgtgtaagcttacataagctatttctataggaaaagatgaac-taaaattaaaatgttttggtatatgctat 53789529  T
Q  277 aagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| |||||| ||||| ||||||| ||||||||||||||||||    
T  53789528 aagttgttatcataagctatcatggagaacttatgaaattaagctgaa 53789481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 171 - 324
Target Start/End: Complemental strand, 35959628 - 35959476
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||||| |||||       |||||||||||| ||||||||||    
T  35959628 ttatatcacaagctcttatcatgataagagcttatgtataagctcacataagctatttctatag-aaaaggataaaataaagttaaattatttttgtata 35959530  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||  |||| |||| || |||||||| ||||| |||||||||    
T  35959529 tgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaa 35959476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 311
Target Start/End: Complemental strand, 30956798 - 30956659
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||  ||||||||||||||   ||||| ||| ||||||||||||||||||||||| |||||       |||||||||||||||||||||||    
T  30956798 ttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagataaaa-taaagttaaattgtttttgtata 30956700  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatg 311  Q
     ||||||||||||||||| || ||||||||||||| |||||    
T  30956699 ggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 311
Target Start/End: Complemental strand, 30972610 - 30972471
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||  ||||||||||||||   ||||| ||| ||||||||||||||||||||||| |||||       |||||||||||||||||||||||    
T  30972610 ttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagataaaa-taaagttaaattgtttttgtata 30972512  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatg 311  Q
     ||||||||||||||||| || ||||||||||||| |||||    
T  30972511 ggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 583958 - 584093
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 284  Q
    |||||| ||||||||||||| ||||| ||||||||||| ||||||||||| ||||        ||||||||||||||||||||  ||||||||||||  |    
T  583958 cttatcgtgataagtgcttacgtataagcttacataagttatttctatag-aaaatgataaaataaagttaaattgtttttgttcatgctataagttagt 584056  T
Q  285 ttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||| |||||||| |||| |||||||||||||||    
T  584057 ttcataagctatcttgaagaacttatgaaattaagct 584093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 321
Target Start/End: Original strand, 20880371 - 20880523
Alignment:
Q  167 cagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg 266  Q
    ||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| |         |||||||||||||||||    
T  20880371 cagtttatagcacaagcggttatcataataagtgcttatgtataagcttacataagctatttttatagcaaatgataaaac--aagttaaattgtttttg 20880468  T
Q  267 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||  |||||| | || |||| |||||||| |||||||| ||||||    
T  20880469 tatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagct 20880523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 324
Target Start/End: Complemental strand, 3845738 - 3845582
Alignment:
Q  167 cagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg 266  Q
    ||||| ||| |||||||||||||  | |||||||||| |||||| |||||||||||||||||||||||  ||||       | ||||| || |||||||     
T  3845738 cagttcatagcacaagcacttattgtaataagtgcttttgtataagcttacataagctatttctatagagaaagataaaatt-aagttgaaatgtttttc 3845640  T
Q  267 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| | | |||||||||||  |||||||||||| |||||||| |||||||||    
T  3845639 tatatgctacatgctgttttcataagttatcttggagaacttatgaaaataagctgaa 3845582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 18405975 - 18405854
Alignment:
Q  200 gcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagtt-aaattgtttttgtatatgctataagttgttttcataacctatct 298  Q
    ||||||||||| ||||||||||| ||||| |||||||||||       ||  ||| || || ||||||||||||||||||||||||||||||| ||||||    
T  18405975 gcttatgtataagcttacataagttatttatataggaaaag-ataaaatatcgttgaatttttttttgtatatgctataagttgttttcataagctatct 18405877  T
Q  299 tggagaatttatgaaattaagct 321  Q
    ||||||| |||||||||||||||    
T  18405876 tggagaacttatgaaattaagct 18405854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 21367641 - 21367717
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| |||||   |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  21367641 taaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaa 21367717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 30443869 - 30443943
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| |||||||||||||||||| |||||| |||| |||| |||||||| |||||||| |||||||||    
T  30443869 aagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaa 30443943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 14145886 - 14145959
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||  | |||||||| ||||||    
T  14145886 taaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataagct 14145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 36631147 - 36631075
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 320  Q
    ||||||||||||||||||||| ||||||||||||||||| || | |||| |||||||| |||||||| |||||    
T  36631147 taaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagc 36631075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 47132310 - 47132381
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||||| |||||||| |||| |||| |||||||| |||||||| |||| ||||    
T  47132310 ttaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaa 47132381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 46778284 - 46778211
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||| ||||||||||  ||||||||||| |||||||||| || |||||||| |||||||||    
T  46778284 aagttaaattgtttttgtttatgctataaactgttttcataaactatcttggacaacttatgaaa-taagctgaa 46778211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 44061115 - 44061046
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    |||||||||||||| |||| |||||||||||||||||||   |||||| ||||| |||||||||||||||    
T  44061115 gttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaattaagct 44061046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 323
Target Start/End: Original strand, 2719362 - 2719517
Alignment:
Q  166 acagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgttttt 265  Q
    |||| ||||| ||||| | ||||||||||||||  |||| | ||| ||||||| |||||||||||| || ||||        |||||| ||||||||||     
T  2719362 acagcttatagcacaaacgcttatcatgataagcacttacgcataagcttacacaagctatttctaaagcaaaa-tataaaataaagtgaaattgtttt- 2719459  T
Q  266 gtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 323  Q
    || || |||||||  ||||||||||| ||||||||||||| |||||||| ||||||||    
T  2719460 gtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagctga 2719517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 39980707 - 39980779
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||| | ||||||||||||||||| |||| |||| |||||||| |||||||| |||| ||||    
T  39980707 gttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaa 39980779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 28622094 - 28622019
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| |||||||||| || |||||||| ||||||||||| ||||||| ||||| |||||||| ||| |||||    
T  28622094 aaagttaagttgtttttgtgtaagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaa 28622019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 12862338 - 12862281
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatg 311  Q
    |||||||||||| |||||||||||||||||||||||||| |||| |||||||| |||||    
T  12862338 ttaaattgtttt-gtatatgctataagttgttttcataagctatattggagaacttatg 12862281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 20257509 - 20257547
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgtttt 286  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20257509 taaagttaaattgtttttgtatatgctataagttgtttt 20257547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 37689147 - 37689243
Alignment:
Q  187 tatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtttt 286  Q
    |||||||||||||||||| ||||| | | ||||||||||||||||||| |||||       |||||  ||||||||||||||||||||||| ||||||||    
T  37689147 tatcatgataagtgcttacgtataagttcacataagctatttctatagcaaaag-ataaaataaag--aaattgtttttgtatatgctataggttgtttt 37689243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 20170417 - 20170535
Alignment:
Q  167 cagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg 266  Q
    |||||||||||||||   ||| |||||||||| ||||||||||  |||| || ||||||||| ||  | |||||       ||| |||||||||||||||    
T  20170417 cagtttatatcacaactgcttttcatgataagcgcttatgtatcagcttgcacaagctatttttactgcaaaagataaaa-taatgttaaattgtttttg 20170515  T
Q  267 tatatgctataagttgtttt 286  Q
    ||||||||||||||||||||    
T  20170516 tatatgctataagttgtttt 20170535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 22203417 - 22203470
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||    
T  22203417 tttttgtataatctataagttgttttcataagctatcttggagaacttatgaaa 22203470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 46886785 - 46886712
Alignment:
Q  251 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| |||||||||  |||||||| ||||||||||| ||||||||||||| || ||||| ||| |||||    
T  46886785 agttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataacctgaa 46886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 402638 - 402562
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| |||||||||||| ||||| | |||||| |||||| |||| |||||||| |||| || |||||||||||||||    
T  402638 taaatttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaa 402562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 46778392 - 46778336
Alignment:
Q  178 acaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 234  Q
    |||| |||||||||||||||| ||||||||||  ||||| |||||||||||||||||    
T  46778392 acaaacacttatcatgataagcgcttatgtatcagcttatataagctatttctatag 46778336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 324
Target Start/End: Complemental strand, 44747487 - 44747428
Alignment:
Q  265 tgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| |||||||| ||||||||||| |||||||||| || |||||||| |||||||||    
T  44747487 tgtataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaa 44747428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 33405263 - 33405197
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||| |||||||  |||| |||||||| ||||||||||| |||||||| |||| ||||||||    
T  33405263 taaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaa 33405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 36189540 - 36189606
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||||||||||||||||||| |||||| | |||| ||||  ||| |||||||| ||||||||    
T  36189540 taaagttaaattgtttttgtatatgatataagctatttttataagatatattggagaacttatgaaa 36189606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 49034355 - 49034293
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||||||||| || ||||||||||||||||||| |||| |||| |||||||| || |||||    
T  49034355 gttaaattgtttgtgcatatgctataagttgtttttataagctatattggagaacttctgaaa 49034293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 1816557 - 1816633
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| ||| |||||||||||| | |||||||||||||||||| ||||  ||||||  |||| ||| |||||||||    
T  1816557 taaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaa 1816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 16073134 - 16073066
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    |||||| ||||||||||||| |||||| ||| |||||||  ||||||| |||||| |||||| ||||||    
T  16073134 ttaaatagtttttgtatatgttataagctgtcttcataagttatcttgaagaattgatgaaaataagct 16073066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 25348815 - 25348891
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| ||| |||||||||||| ||||| ||||||||| ||   ||||||||||| ||| ||||||||| ||||    
T  25348815 taaagttatattatttttgtatatgttataatttgttttcaaaagtaatcttggagaacttacgaaattaagttgaa 25348891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 25447340 - 25447288
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    |||| |||||||||||||||||| |||||||  ||||||||||| ||||||||    
T  25447340 taaacttaaattgtttttgtataagctataaactgttttcataagctatcttg 25447288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 26990571 - 26990511
Alignment:
Q  264 ttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||| |||||| ||||||||||| ||| |||||| |||||| |||||||| |||||||||    
T  26990571 ttgtacatgctacaagttgttttcctaagctatctcggagaacttatgaaaataagctgaa 26990511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 31365391 - 31365359
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttt 285  Q
    |||||||||||||||||||||||||||||||||    
T  31365391 ttaaattgtttttgtatatgctataagttgttt 31365359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 35127467 - 35127411
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    ||||||||||||||||||| |||||||||||  | ||||||||  ||||||||||||    
T  35127467 taaagttaaattgtttttgcatatgctataaactattttcatacactatcttggaga 35127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 35127533 - 35127490
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggct 214  Q
    ||||| || |||| ||||||||||||||||||||||||||||||    
T  35127533 ttataccataagctcttatcatgataagtgcttatgtataggct 35127490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 290
Target Start/End: Original strand, 849636 - 849678
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcata 290  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||    
T  849636 taaagttaaattgtttttgaatatgctataaattgttctcata 849678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 291
Target Start/End: Complemental strand, 11492630 - 11492596
Alignment:
Q  257 attgtttttgtatatgctataagttgttttcataa 291  Q
    ||||||||||||||||||||||||||||| |||||    
T  11492630 attgtttttgtatatgctataagttgtttacataa 11492596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 19983693 - 19983747
Alignment:
Q  186 ttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 240  Q
    |||| |||||||| | ||||||||| ||||||||||| ||||||||||| |||||    
T  19983693 ttattatgataagcgtttatgtataagcttacataagttatttctatagaaaaag 19983747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 31106153 - 31106207
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    |||||||||| |||||||||||| |||||||| ||||| |||  |||||||||||    
T  31106153 aagttaaattatttttgtatatgttataagttattttcgtaatttatcttggaga 31106207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 32095285 - 32095235
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    |||||||||||||||||||||  |||||||  |||||||||| ||||||||    
T  32095285 aagttaaattgtttttgtataaactataagccgttttcataatctatcttg 32095235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 36887504 - 36887554
Alignment:
Q  274 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||| | |||||| |||| |||||||| |||||||||    
T  36887504 tataagttgttttcataagccatcttgaagaacttatgaaaataagctgaa 36887554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 1508753 - 1508696
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 228  Q
    ||||| ||||||  |||||||||||||| ||||||||||| |||| ||||| ||||||    
T  1508753 ttatagcacaagtgcttatcatgataagcgcttatgtataagcttgcataaactattt 1508696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 21335649 - 21335722
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||| | |||||||||||||| || |||| ||||||||||| ||||  | ||||| |||||||| ||||||    
T  21335649 taaagtttagttgtttttgtatattctgtaagctgttttcataagctatactagagaacttatgaaaataagct 21335722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 324
Target Start/End: Complemental strand, 39602335 - 39602230
Alignment:
Q  217 cataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaatt 316  Q
    |||||||||||||||||| |||||       |||||||||||||||   ||||| | |||||| ||||||||||| ||||||| ||||| |||||||| |    
T  39602335 cataagctatttctatagaaaaagataaca-taaagttaaattgttgc-gtataagttataagctgttttcataagctatctttgagaacttatgaaaat 39602238  T
Q  317 aagctgaa 324  Q
    ||| ||||    
T  39602237 aagttgaa 39602230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 43526537 - 43526492
Alignment:
Q  43 ctctatttggtaaaaatagcagatagttgataacttagcttatagc 88  Q
    |||| ||||||||||||||| |||||||||||| |||||| |||||    
T  43526537 ctctgtttggtaaaaatagcggatagttgataagttagctgatagc 43526492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 47587451 - 47587496
Alignment:
Q  257 attgtttttgtatatgctataagttgttttcataacctatcttgga 302  Q
    |||||||||||||||| ||||||||||||| |||| |||| |||||    
T  47587451 attgtttttgtatatgttataagttgtttttataaactatattgga 47587496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 139834 - 139794
Alignment:
Q  182 gcacttatcatgataagtgcttatgtataggcttacataag 222  Q
    ||||||||||||||||| ||||||| ||| |||||||||||    
T  139834 gcacttatcatgataagcgcttatgcataagcttacataag 139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 466107 - 466159
Alignment:
Q  178 acaagcacttatcatgataagtgcttatgtataggcttacataagctatttct 230  Q
    |||||||||||| ||||||||  |||||| ||| |||||||||| ||||||||    
T  466107 acaagcacttattatgataagctcttatgcataagcttacataatctatttct 466159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 19679424 - 19679368
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    |||||| ||| ||||||  |||| ||||||||||||||| |||| ||||||||||||    
T  19679424 taaagtcaaactgttttcttataagctataagttgtttttataaactatcttggaga 19679368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 24627464 - 24627504
Alignment:
Q  48 tttggtaaaaatagcagatagttgataacttagcttatagc 88  Q
    ||||||||||||||| ||||||||||||  |||||||||||    
T  24627464 tttggtaaaaatagcggatagttgataagctagcttatagc 24627504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 26878095 - 26878167
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| ||||||   | |||||||||||||||| | |||||||| |||||| |||||| || ||||||    
T  26878095 gttaaattgtgtttgtacgagttataagttgttttcattagctatcttgaagaattaatgaaaatatgctgaa 26878167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 36507171 - 36507111
Alignment:
Q  264 ttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||| ||||||||  | |||||||| |||| ||||||||||||| ||| |||||||||    
T  36507171 ttgtataagctataagcagctttcataaactattttggagaatttataaaaataagctgaa 36507111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 190 - 366
Target Start/End: Complemental strand, 4970941 - 4970772
Alignment:
Q  190 catgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcat 289  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||| |||||       |||| | ||||||||||||||||||||||||||| |||| ||    
T  4970941 catgataagcggttatgtataagcttacataagctatttctatagcaaaaga------taaaataaaattgtttttgtatatgctataagttctttttat 4970848  T
Q  290 aacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagcttattttcataagtt 366  Q
    ||  ||| || ||||| |||||||| ||| ||||||||||| || |||||| || |||||| || ||||||||||||    
T  4970847 aagatatattagagaacttatgaaaataaactgaatttttttttttgaaaattgccataag-ttgttttcataagtt 4970772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 17944439 - 17944363
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||||| | ||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  17944439 taaagttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaa 17944363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 30571084 - 30570957
Alignment:
Q  190 catgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcat 289  Q
    |||||||||||| |||||||| |||||||||||||| || |||||  ||||       |||||||||||| ||||||||||||||||||| | |||| ||    
T  30571084 catgataagtgcatatgtataagcttacataagctacttatatagcgaaaggtaaaa-taaagttaaattatttttgtatatgctataagctatttttat 30570986  T
Q  290 aacctatcttggagaatttatgaaattaa 318  Q
    ||||||  |||||||| ||||||||||||    
T  30570985 aacctacattggagaacttatgaaattaa 30570957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 366
Target Start/End: Complemental strand, 33601505 - 33601390
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcat 347  Q
    |||||||||||| ||||||||| |||||||||||||||| |||| ||||||| ||||| ||||||| ||||||||||      |||||||||||||||||    
T  33601505 taaagttaaattatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaa-aaaagcttatgaaaagtgtcat 33601408  T
Q  348 aagcttattttcataagtt 366  Q
    |||| | ||||||||||||    
T  33601407 aagc-tgttttcataagtt 33601390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 291
Target Start/End: Original strand, 46078051 - 46078166
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg--tatatgct 274  Q
    ||||| ||| |||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||        ||||||||||||||||||  ||||||||    
T  46078051 cacaaacacatatcatgataagcgcttatgtataagcttacataagttatttttatagaaaaagataaaac-aaagttaaattgtttttgtatatatgct 46078149  T
Q  275 ataagttgttttcataa 291  Q
    ||||||||||| |||||    
T  46078150 ataagttgtttacataa 46078166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 46280368 - 46280292
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||||||||||||||||||| |||||| |||| |||| |||||||| |||||||| || ||||||    
T  46280368 taaatttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaa 46280292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 47177611 - 47177683
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||||||  |||| |||||||| |||||||| || |||||||||||||||||||||| ||||||    
T  47177611 aaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagct 47177683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 248 - 319
Target Start/End: Complemental strand, 15309661 - 15309590
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    ||||||||||||||||||||||||| | ||||||||||||||||  ||| | ||||||||||||||| ||||    
T  15309661 taaagttaaattgtttttgtatatgttttaagttgttttcataagttatttcggagaatttatgaaaataag 15309590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 253 - 368
Target Start/End: Complemental strand, 33602117 - 33602005
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagct 352  Q
    ||||||||||||||||| |||||||||| ||||| |||| ||||||| ||||| ||||||| ||||||||||      |||||||||||||||||||||     
T  33602117 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaa-aaaggcttatgaaaagtgtcataagc- 33602021  T
Q  353 tattttcataagtttt 368  Q
    | ||||||||||||||    
T  33602020 tgttttcataagtttt 33602005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 48507698 - 48507773
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctat-cttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||||||||||||  ||||||||||| | || ||| ||||| ||||||||||||||||||    
T  48507698 aagttaaattgtttttgtatatgctataaactgttttcataagccatccttagagaacttatgaaattaagctgaa 48507773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 323
Target Start/End: Complemental strand, 40252202 - 40252128
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 323  Q
    |||||||||| ||||||||||||| |||||| | |||||||||  |||||||||||| |||||||| ||||||||    
T  40252202 aaagttaaatcgtttttgtatatgttataagctcttttcataagttatcttggagaacttatgaaaataagctga 40252128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 40377948 - 40377882
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||||||||| |||||||||||| |  |||||||||||||||||||| |||||||| ||||||||    
T  40377948 taaagttaaattctttttgtatatgttgcaagttgttttcataacctatattggagaacttatgaaa 40377882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 420342 - 420410
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||| |||| ||||    
T  420342 aattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaa 420410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 39907781 - 39907853
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||| |||||||  ||||||||||| ||||||| ||||| | |||||| |||||||||    
T  39907781 gttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaa 39907853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 20269551 - 20269626
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||| ||| |||||||||||||  ||| || | ||||||||||||||||| |||| ||||    
T  20269551 aaagttaaattgtttttgtaaatgttataagttgttttactaagctgtattggagaatttatgaaaataagttgaa 20269626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 34744010 - 34744073
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||||||| |||| ||| ||||    
T  34744010 aattgtttttgtatatggtataagttgttttcataagctatattggagaacttataaaaataag 34744073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 12110334 - 12110400
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||| |||||||||| ||||| |||||||| ||||||||||| |||||||| |||| ||||||||    
T  12110334 taaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaa 12110400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 20881730 - 20881656
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||  ||| | |||||||||||||||||||| |||||||  |||| |||||||| |||||||||    
T  20881730 aagttaaattgtttccgtacaagctataagttgttttcataaactatcttaaagaacttatgaaaataagctgaa 20881656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 324
Target Start/End: Original strand, 39279887 - 39280012
Alignment:
Q  197 agtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctat 296  Q
    |||||||||||||| ||||||||| ||||||||||| | |||||       ||| |||||||||||| |||||||| |||| | || ||||||||  |||    
T  39279887 agtgcttatgtataagcttacata-gctatttctattgcaaaagataaaattaa-gttaaattgtttgtgtatatgttataggctgatttcataaattat 39279984  T
Q  297 cttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| || ||||| |||||||||    
T  39279985 cttggagaacttttgaaaataagctgaa 39280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 20526420 - 20526493
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    |||||||||||| | |||||| |||||||||| ||||||||||| |||| |||||||| | |||||| ||||||    
T  20526420 taaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagct 20526493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 291
Target Start/End: Original strand, 119850 - 119927
Alignment:
Q  213 cttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataa 291  Q
    ||||||||||||||||||| ||||||||       |||||||||||||||| |||| ||||||||||||||||| ||||    
T  119850 cttacataagctatttctacaggaaaagataaaa-taaagttaaattgtttgtgtaaatgctataagttgtttttataa 119927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 22283840 - 22283764
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||  |||||||  ||||||||||| | ||||| ||||| ||||| || |||||||||    
T  22283840 taaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaa 22283764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 27863821 - 27863745
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||| |||||| | |||||||||||||||||||||||| |||| |||| || ||||| |||||||  |||||||||    
T  27863821 taaagataaattttatttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaa 27863745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 33678754 - 33678830
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| ||||||||| | |||||||| ||||||||||| |||||||||| || || ||||| |||| ||||    
T  33678754 taaagttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaa 33678830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 43694666 - 43694594
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 320  Q
    |||| ||||||||||||||||||||||||||| |||||| |||| |||| | | |||| |||||||| |||||    
T  43694666 taaatttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataagc 43694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 44821933 - 44822009
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| |||||||||||||||| | |||||| ||||||||||| ||||  ||||||| |||||||| |||| ||||    
T  44821933 taaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaa 44822009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 45790521 - 45790445
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| |||||| | |||| ||||||||||||||| |||| |||| ||||| || |||||||| |||||||||    
T  45790521 taaagttaatttgtttatttataagctataagttgtttttataaactatattggataacttatgaaaataagctgaa 45790445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 324
Target Start/End: Complemental strand, 19022676 - 19022605
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||  || ||||||||||||||||| |||| |||| |||||||| |||||||| |||| ||||    
T  19022676 ttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaa 19022605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 45263997 - 45264100
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttct--ataggaaaagnnnnnnntaaagttaaattgtttttgtatatgct 274  Q
    ||||||| |||||||||| ||| ||||| | ||| ||||||||||||||||| |  |||| |||||       |||||||||||||||||||||||||||    
T  45263997 cacaagcgcttatcatgaaaagcgcttacgcataagcttacataagctatttttttatagaaaaagatgaaa-taaagttaaattgtttttgtatatgct 45264095  T
Q  275 ataag 279  Q
    |||||    
T  45264096 ataag 45264100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 48470020 - 48470083
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaa 313  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||| ||| | || |||||||    
T  48470020 aagttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaa 48470083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 45806649 - 45806530
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| || ||||||||||||| |||||  |||||||||| |||| |||||||||| | ||||| |||||       ||| |||||||||||||| ||      
T  45806649 ttatagcaaaagcacttatcataataagcacttatgtataagcttgcataagctatgtttatagcaaaag-agaaaataacgttaaattgtttttctaat 45806551  T
Q  271 tgctataagttgttttcataa 291  Q
    |||||||||||||||| ||||    
T  45806550 tgctataagttgtttttataa 45806530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 37064557 - 37064484
Alignment:
Q  251 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||  |||||||||||| ||||||| ||| |||| || ||| | |||||||| |||||||||    
T  37064557 agttaaattgtttttacatatgctataagctgttttcgtaagctattttagaggacttatgaaaataagctgaa 37064484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 38500094 - 38500033
Alignment:
Q  167 cagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 228  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| | ||||| ||| |||||    
T  38500094 cagtttatagcacaagcgcttatcatgataagcgcttatgtatatgattacagaagttattt 38500033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 38639989 - 38640054
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||||||||||| ||||| ||||||||| |||| |||| |||| ||||| || ||||||||    
T  38639989 aaagttaaattgtttttttatatactataagttatttttataagctatattggataagttatgaaa 38640054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 43648225 - 43648290
Alignment:
Q  259 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| ||||||| |||||| ||||||||||| |||||||||||||  ||||||| |||| ||||    
T  43648225 tgttttcgtatatgatataagctgttttcataagctatcttggagaaaatatgaaaataagttgaa 43648290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 3308424 - 3308372
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagc 223  Q
    ||||| |||||| |||| |||||||||||||||||||||| | ||||||||||    
T  3308424 ttatagcacaagtacttttcatgataagtgcttatgtataaggttacataagc 3308372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 19302651 - 19302607
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctat 296  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||    
T  19302651 gttaaattgtttttgtatatgttataagttgtttttataagctat 19302607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 17248530 - 17248598
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    |||||||||||||||||||||| |||||||| | |||||||||   ||||| ||||| |||||||| ||||    
T  17248530 aaagttaaattgtttttgtataagctataagctcttttcataa--gatcttagagaacttatgaaaataag 17248598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 21568786 - 21568731
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 240  Q
    ||||||||||||||  |||||||||| |||| |||||||||||| ||||| |||||    
T  21568786 cttatcatgataagcacttatgtataagcttgcataagctatttttatagcaaaag 21568731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 33673056 - 33673127
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||| | |||||||| |||||||| ||||| ||||| |||| ||||||||||||| |||  ||||||||    
T  33673056 ttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataaaaacaagctgaa 33673127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 248 - 291
Target Start/End: Complemental strand, 34083621 - 34083578
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataa 291  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  34083621 taaagttaaattgtttgtgtataagctataagctgttttcataa 34083578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 324
Target Start/End: Complemental strand, 38138651 - 38138499
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||| ||||| |||||||||| | ||||||||| | ||  ||||||||||| ||||| | |||       ||| |||| |||| |||||||||    
T  38138651 ttatagcacaatcacttgtcatgataagagtttatgtataaggttggataagctatttttatagtataagataaag-taacgttacattgattttgtata 38138553  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||| || | |||| |||  ||| |||||||| |||| ||||    
T  38138552 tgctataagttgtttttattagctatattgacgaacttatgaaaataagttgaa 38138499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 45338428 - 45338498
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||||| |||||||||||  ||| |||| |||||||| | |||||| |||| ||||    
T  45338428 ttaaattgtttttgtatatgctgtaagttgtttt-ttaagctatattggagaactgatgaaaataagttgaa 45338498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 319
Target Start/End: Complemental strand, 5569731 - 5569661
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    |||| ||||||||||| ||||| | ||||||||||||||||||  ||||||| |||| | |||||| ||||    
T  5569731 aaagctaaattgttttggtataagttataagttgttttcataagttatcttgaagaactaatgaaaataag 5569661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 13960890 - 13960928
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgtttt 286  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  13960890 taaagttaaattgtttttgtataacctataagttgtttt 13960928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 19718989 - 19719034
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttgga 302  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  19718989 aattgtttttgtaaatgttataagttgttttcataa-ctatcttgga 19719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 20258490 - 20258552
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||||||||||||||  ||||||||||||||||  ||| || | ||||||||| |||||||    
T  20258490 gttaaattgtttttgtaattgctataagttgttttactaagctgtattggagaatatatgaaa 20258552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 30456546 - 30456480
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||| ||||||||||  |||| | ||||||| |||||||||| ||||||||||||  ||||||||    
T  30456546 taaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaa 30456480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 47130855 - 47130805
Alignment:
Q  274 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||| ||||||||||||| || ||||| |||| ||||    
T  47130855 tataagttgttttcataagctatcttggagaacttgtgaaaataagttgaa 47130805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 48917414 - 48917368
Alignment:
Q  276 taagttgttttcataacctatcttggagaatttatgaaattaagctg 322  Q
    |||||||||||||||| ||||||||||||  |||||||| |||||||    
T  48917414 taagttgttttcataagctatcttggagagcttatgaaaataagctg 48917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 8960723 - 8960666
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||||||||||||| ||| ||| ||||| |||| |||| || |||||    
T  8960723 taaagttaaattgtttttgtatatgttatgagtagtttttataaactatattagagaa 8960666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 20881801 - 20881760
Alignment:
Q  168 agtttatatcacaagcacttatcatgataagtgcttatgtat 209  Q
    |||||||| ||||||||||||||||||||||  |||||||||    
T  20881801 agtttatagcacaagcacttatcatgataagctcttatgtat 20881760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 33128661 - 33128718
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 234  Q
    ||||| |||||||||||||||||||||||| ||| |||||| || | ||||| |||||    
T  33128661 cacaaacacttatcatgataagtgcttatgcataagcttacttacgttatttttatag 33128718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 39279738 - 39279791
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgga 302  Q
    |||||||||||| |||||||||| ||||||| || ||||||||  |||||||||    
T  39279738 aaagttaaattgcttttgtatattctataagctggtttcataagttatcttgga 39279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 40689082 - 40689009
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    |||||||||||| ||||  |||| |||||||| ||| ||||||| ||||| |||| || |||||||| ||||||    
T  40689082 taaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagct 40689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 31512067 - 31512035
Alignment:
Q  43 ctctatttggtaaaaatagcagatagttgataa 75  Q
    |||| ||||||||||||||||||||||||||||    
T  31512067 ctctgtttggtaaaaatagcagatagttgataa 31512035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 31744287 - 31744359
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||| ||||||| ||||||  ||| |||| |||| ||| |||| |||||||| |||| ||||    
T  31744287 gttaaattgtttttggatatgctttaagttaattttataaactatattgaagaacttatgaaaataagttgaa 31744359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 31771703 - 31771743
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcata 290  Q
    |||||||| |||||||||||| |||||||| ||||||||||    
T  31771703 aagttaaactgtttttgtataagctataagctgttttcata 31771743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 39967894 - 39967970
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| |||||||||||| |||   |||||||||||||||||||| ||||||  ||||| | |||||| |||| ||||    
T  39967894 taaacttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaa 39967970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 314
Target Start/End: Complemental strand, 50681261 - 50681119
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| |||||| ||||||||||||||| | ||||||||| ||||||| ||||||||| ||||||| |||       ||| |||||||||||||||||||    
T  50681261 ttatagcacaagaacttatcatgataagcgtttatgtataagcttacaaaagctatttttataggataagataaaa-taatgttaaattgtttttgtata 50681163  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||||||||||||  |||| |||| |||||||| ||||||||    
T  50681162 tgctataagttgtttatataagctatattggagaaattatgaaa 50681119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 17822959 - 17822888
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  17822959 aagttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagct 17822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 324
Target Start/End: Complemental strand, 55414584 - 55414440
Alignment:
Q  179 caagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataa 278  Q
    ||||| |||| |||||||||| ||||| |||| || | |||||||||||||||| |||||||       ||||||||| || |||||| |||||||||||    
T  55414584 caagcgcttaccatgataagttcttatttataagcgtgcataagctatttctattggaaaagataaaa-taaagttaatttttttttgcatatgctataa 55414486  T
Q  279 gttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
     ||||||||||||  |||||||||||| |||||||| |||| ||||    
T  55414485 attgttttcataagttatcttggagaacttatgaaaataagttgaa 55414440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 22030116 - 22030213
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 284  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||||||||  ||||       |||||||| ||| ||||||||||||||||||||||||    
T  22030116 cttatcatgataagcgcttatgtataagctcacataagctatttctatag--aaaggataaaataaagttatattatttttgtatatgctataagttgtt 22030213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 286
Target Start/End: Original strand, 41336649 - 41336772
Alignment:
Q  161 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattg 260  Q
    ||||||||| ||||| ||||||  ||||| ||||||||  ||||||||||||||| |||||||||||| ||||| |||         |||||||||||||    
T  41336649 gataaacagcttatagcacaagttcttattatgataagcacttatgtataggcttgcataagctatttttatagcaaa--gataaaataaagttaaattg 41336746  T
Q  261 tttttgtatatgctataagttgtttt 286  Q
    |||||||||||| ||||| |||||||    
T  41336747 tttttgtatatgttataaattgtttt 41336772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 51630085 - 51630161
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||  |||| |||||||| | ||||||||| |||||||| ||||||||||||| |||||||||    
T  51630085 taaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaa 51630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 53294210 - 53294134
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||| || ||||| ||||||||  ||||||||    
T  53294210 taaatttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaa 53294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 16200066 - 16200004
Alignment:
Q  259 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| | |||||||| ||||||    
T  16200066 tgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagct 16200004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 21731742 - 21731676
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||| |||| ||||    
T  21731742 ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaa 21731676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 3155577 - 3155653
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||| | |||| ||| ||||||||||| |||||||| |||| | |||||| |||||||||    
T  3155577 taaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaataagctgaa 3155653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 17884042 - 17884118
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||| | ||| |||||||||||||| |||| |||||||  |||||||| | |||||||    
T  17884042 taaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaa 17884118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 54392915 - 54392839
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||||||||| || |||||| ||||  |||||||||||| || ||||| |||| ||||    
T  54392915 taaagttaaattgtttttgtatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaa 54392839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 9760414 - 9760480
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||||||||| |||||  ||||||||||||||||||| |||| |||| |||||||| ||||||||    
T  9760414 taaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaa 9760480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 17204043 - 17204178
Alignment:
Q  178 acaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctata 277  Q
    |||||||||||||| |||||  |||||||| |  ||||||||||||| ||| ||||| ||| |       |||||||| ||||||||||||||||||| |    
T  17204043 acaagcacttatcacgataaccgcttatgtgttagcttacataagctgtttttatagcaaatgttaaaa-taaagttatattgtttttgtatatgctaca 17204141  T
Q  278 agttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||  |||||| |  |||||||||||| ||||||||    
T  17204142 agttagtttcattagttatcttggagaacttatgaaa 17204178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 56480322 - 56480388
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||||||||||||| |||||| | |||||| ||||||||||| ||||||||||||  ||||||||    
T  56480322 taaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaa 56480388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 305
Target Start/End: Original strand, 18425711 - 18425843
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| |||||||||||| ||||||||||| ||||||||| | |||||| |||||||| ||| || |||        ||||||||||||||||||||| |    
T  18425711 ttatagcacaagcacttaccatgataagtgattatgtataagattacatgagctattt-tat-ggcaaatggtaaaataaagttaaattgtttttgtaca 18425808  T
Q  271 tgctataagttgttttcataacctatcttggagaa 305  Q
    || |||||  |||||||| || | |||||||||||    
T  18425809 tgttataaaatgttttcaaaagccatcttggagaa 18425843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 24169159 - 24169216
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 228  Q
    ||||||||| ||||||||||||||| || ||||||||||  |||||||||||||||||    
T  24169159 ttatatcaccagcacttatcatgattagcgcttatgtatgagcttacataagctattt 24169216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 27043926 - 27043869
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||||| ||||| |||||||| |||||| |||| |||||||||||||    
T  27043926 taaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaa 27043869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 25904386 - 25904268
Alignment:
Q  171 ttatatcacaagcacttatcatgataa----gtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttg 266  Q
    ||||| |||||||||||||||||||||    ||| |||| |||| ||||||||||||||||| || || |||||       ||||||||||||| |||||    
T  25904386 ttatagcacaagcacttatcatgataagcatgtgattatatataagcttacataagctatttttacagcaaaag-ataaaataaagttaaattgattttg 25904288  T
Q  267 tatatgctataagttgtttt 286  Q
    ||| ||||||||| ||||||    
T  25904287 tatttgctataagctgtttt 25904268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 324
Target Start/End: Original strand, 29912847 - 29912998
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| || ||||| ||||||| |||||  ||| ||||||  ||||||| |||||||||||||| ||||        |||||| |||||||||| |||||    
T  29912847 ttatagcataagcagttatcataataagcacttttgtatacacttacatcagctatttctatagcaaaa-aataaaataaagtaaaattgtttt-gtata 29912944  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    || || |||| |||||||||| |||||||||| || |||| ||| |||||||||    
T  29912945 tgttaaaagtcgttttcataagctatcttggacaacttataaaaataagctgaa 29912998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 323
Target Start/End: Complemental strand, 437340 - 437265
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 323  Q
    |||||||||||| |||||| || || ||| || |||||| |||| |||| ||||||||||||||||| ||||||||    
T  437340 taaagttaaattatttttgcatgtgttatgagctgtttttataaactatattggagaatttatgaaaataagctga 437265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 42685400 - 42685455
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    |||||||||||||||| |||| ||| |||||||||||||||| |||| ||||||||    
T  42685400 aagttaaattgtttttttataagctctaagttgttttcataagctattttggagaa 42685455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 47119060 - 47118985
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||  |||| |||||||||||| ||||||  |||||||| |||| |||||||  |||||||||    
T  47119060 aaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaa 47118985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 7694104 - 7694030
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||| |||||||||||| |||||||| |||||||||||  |||| |||||| |||||| || |||||||||    
T  7694104 aagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaa 7694030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 8422926 - 8422860
Alignment:
Q  257 attgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 323  Q
    ||||||||  |||| ||||||||||||||||| || |||||||||||| |||||| || ||||||||    
T  8422926 attgttttcatataagctataagttgttttcacaatctatcttggagagtttatgcaaataagctga 8422860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 35571725 - 35571651
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| |||||||| ||||| |||||||| ||||||||||| ||||||| ||||| || ||||| |||| ||||    
T  35571725 aagttatattgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaa 35571651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 42121472 - 42121538
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| |||||| |||||||||||||||||| | ||||||||||||| || || || |||||||||    
T  42121472 ttgtttctgtataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctgaa 42121538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 1407933 - 1408006
Alignment:
Q  251 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| || |||  ||| ||||||||||| |||||| ||| ||||||||||  |||||||||    
T  1407933 agttaaattgtttttgtgtaagctgcaagctgttttcataagctatctaggaaaatttatgaagataagctgaa 1408006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 2996554 - 2996603
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    ||||||||||| |||| | |||||||||||||||||| ||||||||||||    
T  2996554 aaattgtttttatataagttataagttgttttcataagctatcttggaga 2996603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 19395205 - 19395136
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||| |||||||  ||||||||| | ||||||||||||||| ||  || |||||||||    
T  19395205 aaattgtttttgtataagctataaaatgttttcattagctatcttggagaattgattgaaataagctgaa 19395136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 23277311 - 23277360
Alignment:
Q  161 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtata 210  Q
    ||||||||| ||||| ||||||||||||| |||||||| |||||||||||    
T  23277311 gataaacagcttatagcacaagcacttataatgataagagcttatgtata 23277360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 52707572 - 52707617
Alignment:
Q  43 ctctatttggtaaaaatagcagatagttgataacttagcttatagc 88  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||    
T  52707572 ctctatttggtaaaaatagcggatagctgataagttagcttatagc 52707617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 55064809 - 55064885
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataa--cctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||| ||||||||| | |||||||||||    |||||||||||| |||||||| |||| ||||    
T  55064809 aagttaaattgtttttgtgtatgctatatgctgttttcataaatgttatcttggagaacttatgaaaataagatgaa 55064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 25885833 - 25885885
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    ||||||||||||||||| || || ||||||||||||||||||||  |||||||    
T  25885833 taaagttaaattgttttcgtgtaagctataagttgttttcataagttatcttg 25885885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 28300395 - 28300319
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||| |||||||  | ||||||||  |||||||| |||  |||||||| |||| ||||    
T  28300395 taaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaa 28300319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 29388592 - 29388664
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| |||  |||||| ||||| |||| ||||  |||||||||||||||| |||| ||||    
T  29388592 gttaaattgtttttgtagatgtgataagtagtttttataagctatactggagaatttatgaaaataagttgaa 29388664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 30668433 - 30668360
Alignment:
Q  277 aagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataagct 352  Q
    |||||||||| |||| |||||||||| | |||||||||||||||||||      ||||||||||||||||||||||    
T  30668433 aagttgtttttataagctatcttggatagtttatgaaattaagctgaa--aaagcttatgaaaagtgtcataagct 30668360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 35064829 - 35064905
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||| |||| |||||||||||| |||||| | |||||||||||  |||| |||||| |||||| || |||||||||    
T  35064829 taaagataaactgtttttgtataggctatatgctgttttcataagatatcatggagagtttatggaaataagctgaa 35064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 44138533 - 44138609
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||| ||| |||||  || ||| |||||||||||| | || |||||||| |||||||| |||||||||    
T  44138533 taaagttaaattgctttcgtatagcctgtaatttgttttcataaaccatgttggagaacttatgaaaataagctgaa 44138609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 52746936 - 52746884
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    |||||||||||||||||||| || || ||||| ||||||||||| ||||||||    
T  52746936 taaagttaaattgtttttgtgtaagccataagctgttttcataagctatcttg 52746884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 16494888 - 16494845
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||    
T  16494888 tttttttataagctataagttgttttcataagctatcttggaga 16494845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 41512633 - 41512696
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    |||||||||||  ||||||||||||||||||||||| || ||| | |||| |||||||| ||||    
T  41512633 aattgtttttgcgtatgctataagttgttttcataagctttctggaagaacttatgaaaataag 41512696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 49940078 - 49940023
Alignment:
Q  257 attgtttttgtatatgctataagttgttttcataacctatcttggagaatttatga 312  Q
    |||||||| ||||| ||||| || ||||||||||| ||||||||||| ||||||||    
T  49940078 attgttttcgtataagctattagctgttttcataagctatcttggagcatttatga 49940023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 54069509 - 54069470
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataa 291  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  54069509 gttaaattgtttttgtatatgctataatttgtttttataa 54069470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 7601733 - 7601799
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||||||||||||||||||| ||| ||| ||||| |||| |||| || ||||| ||| ||||    
T  7601733 taaagttaaattgtttttgtatatgttatgagtagtttttataaactatattagagaacttaagaaa 7601799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 13126694 - 13126629
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| ||||||||||| | ||||||||| |||| |||| ||| |||||||| |||||||||    
T  13126694 ttgtttttgt-tatgctataaggtattttcataagctatgttggtgaacttatgaaaataagctgaa 13126629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 39691225 - 39691163
Alignment:
Q  262 ttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||||| |||| |||| ||| |||| ||| |||| |||| ||||    
T  39691225 ttttgtatatgctataagttgtttttataagctatattgaagaacttacgaaaataagttgaa 39691163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 291
Target Start/End: Complemental strand, 2466005 - 2465972
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataa 291  Q
    ||||||||||||| ||||||||||||||||||||    
T  2466005 ttgtttttgtataagctataagttgttttcataa 2465972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 7839450 - 7839381
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||||||| ||||||| |||| |||  ||| |||| ||| |||| |||| ||||    
T  7839450 aaattgtttttgtatatgctataaattgtttttataagctagattgaagaacttacgaaaataagttgaa 7839381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 21731823 - 21731782
Alignment:
Q  163 taaacagtttatatcacaagcacttatcatgataagtgctta 204  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||    
T  21731823 taaacagcttatagcacaagcgcttatcatgataagtgctta 21731782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 31076531 - 31076425
Alignment:
Q  198 gtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatc 297  Q
    ||||||||||||| |||| |||||||||||| || || |||||       |||  ||||| |||||||||||||||||||| ||||||| |||| ||||     
T  31076531 gtgcttatgtataagcttgcataagctatttttagagcaaaagataaaa-taagtttaaactgtttttgtatatgctataaattgtttttataagctata 31076433  T
Q  298 ttggagaa 305  Q
    ||| ||||    
T  31076432 ttgaagaa 31076425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 2111121 - 2111073
Alignment:
Q  273 ctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||||||||| |||||||| || | |||||||| ||||||    
T  2111121 ctataagttgttttcataagctatcttgaaggacttatgaaaataagct 2111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 23277405 - 23277441
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataa 291  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  23277405 aaattgtttttttatatgttataagttgttttcataa 23277441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 43505871 - 43505923
Alignment:
Q  188 atcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 240  Q
    |||||||||||  |||||||||| |||| |||||||||||| ||||| |||||    
T  43505871 atcatgataagcacttatgtataagcttgcataagctatttttatagcaaaag 43505923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 44249295 - 44249335
Alignment:
Q  284 tttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| |||||||||||| ||||||||| |||||||||    
T  44249295 tttcataaactatcttggagagtttatgaaaataagctgaa 44249335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 47946174 - 47946214
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcata 290  Q
    ||||||||||||||| ||||| ||||||| |||||||||||    
T  47946174 aagttaaattgttttcgtataagctataaattgttttcata 47946214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 49202627 - 49202695
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||  ||||| |||||||||||||||| ||| |||||||||| || | |||||| |||| ||||    
T  49202627 aattgtttcggtataagctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaa 49202695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 49219113 - 49219189
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| ||||| ||||  |||| |||||||||||||||||||| |||||||  |||  ||||| || |||||||||    
T  49219113 taaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaa 49219189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 50004240 - 50004164
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||  ||||  | || || ||||||| |||  |||||||||||| |||||||| |||||||||    
T  50004240 taaagttaaattgttttcatataaacaatgagctgttttcctaagttatcttggagaacttatgaaaataagctgaa 50004164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 50662818 - 50662758
Alignment:
Q  264 ttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||  |||| |||| |||||||| || ||||| |||| ||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaa 50662758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 27976511 - 27976626
Alignment:
Q  189 tcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttca 288  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||| ||| |        ||||||||||||||||||||||||||||||||||||||||    
T  27976511 tcatgataagtccttatgtataagcttacataagctatttttatagcaaatgattgaac-aaagttaaattgtttttgtatatgctataagttgttttca 27976609  T
Q  289 taacctatcttggagaa 305  Q
    ||| ||||||| |||||    
T  27976610 taagctatcttcgagaa 27976626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 51688617 - 51688754
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 284  Q
    |||||||||||||||| |||| |||| |||||||| |||||||| | |||||||||       ||||| ||||||||||||||| |||||||||||||||    
T  51688617 cttatcatgataagtgtttatatataagcttacatgagctatttatgtaggaaaagataaaa-taaagataaattgtttttgtacatgctataagttgtt 51688715  T
Q  285 ttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||| ||| ||||| ||||| | ||||||||||||||||||    
T  51688716 ttcgtaagctatcgtggag-acttatgaaattaagctgaa 51688754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 324
Target Start/End: Complemental strand, 41195366 - 41195213
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||| |||||| ||||||  ||||||||||| | |||||||| |||||| ||||| ||| |        ||||||||| ||||||||||||    
T  41195366 ttatagcacaagcgcttatcctgataatcgcttatgtataagtttacataaactatttttatagtaaatgataacataaaagttaaactgtttttgtata 41195267  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    | |||| |  ||||||||||| ||||||||||||| |||||||| |||||||||    
T  41195266 tactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaa 41195213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 24915186 - 24915071
Alignment:
Q  208 ataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatt 307  Q
    |||||||||||||| |||||||||||| | |||       |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| |    
T  24915186 ataggcttacataaactatttctatagcagaagataaaa-taaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaact 24915088  T
Q  308 tatgaaattaagctgaa 324  Q
    | ||||| |||| ||||    
T  24915087 tgtgaaaataagttgaa 24915071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 305
Target Start/End: Original strand, 41505585 - 41505717
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||| | ||||| |||||||||||||||| || |||||||||||||||||| ||||| ||| |       ||||||||||||||||| |||||    
T  41505585 ttatagcacaaacgcttatgatgataagtgcttatgcattggcttacataagctatttttatagaaaacg--taaattaaagttaaattgttttcgtata 41505682  T
Q  271 tgctataagttgttttcataacctatcttggagaa 305  Q
    || |||||| |||||| |||| |||| ||||||||    
T  41505683 tgttataagctgtttttataagctatattggagaa 41505717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 1432492 - 1432605
Alignment:
Q  251 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaattttttcttatgaaaagtgtcataag 350  Q
    |||| |||||||||| |||| ||||||| |||||||||||| ||||||||||||| |||||||| |||||| || | | ||||||||| | ||||||| |    
T  1432492 agttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaagtaagct-aagtatgtcttatgaacaatgtcatacg 1432590  T
Q  351 cttattttcataagtt 366  Q
    | ||||||||||||||    
T  1432591 c-tattttcataagtt 1432605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 3234107 - 3234040
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||| ||||    
T  3234107 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataag 3234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 2295016 - 2295100
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgcta 275  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||        ||| |||||||||||||||||||||||    
T  2295016 cttatcatgataagtgcttatgcataagcttacataagctatttctatagaaaaagcc------aaaattaaattgtttttgtatatgcta 2295100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 7218170 - 7218094
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| ||||||||||  |||| |||||||||||||||||||||||||| ||||||| |||||||| |||| ||||    
T  7218170 taaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaa 7218094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 27820433 - 27820357
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||| |||||||||| |||||| |||||| | |||||| |||| |||||||||||||||||||||| |||||||||    
T  27820433 taaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaa 27820357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 17603476 - 17603409
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| |||||||| || ||||| ||||    
T  17603476 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataag 17603409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 45975677 - 45975740
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| |||| ||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  45975677 tttttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaa 45975740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 7472287 - 7472361
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||||  ||||||| ||||| ||||| ||||||||||||  |||||||| |||||||||    
T  7472287 aagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaa 7472361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 15784224 - 15784282
Alignment:
Q  153 ccctgtttg-ataaacagtttatatcacaagcacttatcatgataagtgcttatgtata 210  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  15784224 ccctgtttggataaacagtttatatcacaagcacttattatgataagcgcttatgtata 15784282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 324
Target Start/End: Original strand, 47432035 - 47432145
Alignment:
Q  212 gcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatg 311  Q
    ||||||||||||||||| ||||| |||||       ||||||||||||||||||| |||||||||||| |||||| ||||  ||| ||| ||||||||||    
T  47432035 gcttacataagctatttttatagaaaaagataaaa-taaagttaaattgtttttgaatatgctataaggtgtttt-ataagttatattgaagaatttatg 47432132  T
Q  312 aaattaagctgaa 324  Q
    ||| |||||||||    
T  47432133 aaaataagctgaa 47432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 51695585 - 51695515
Alignment:
Q  254 taaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| ||||| | ||| || ||||||||||| |||||||||||||||||||||| |||||||||    
T  51695585 taaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaa 51695515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 2294885 - 2294961
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||| ||| |||||||| | ||||||||| ||||||||||||| ||| |||| |||| ||||    
T  2294885 taaagttaaattgtttttggataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaa 2294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 324
Target Start/End: Complemental strand, 14576825 - 14576674
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||| ||||||||||||||  ||||| |||| ||| |  ||||||||||| |||| ||| |       |||||||||||||||||||||||    
T  14576825 ttatagcacaagctcttatcatgataagcacttatttataagctcatgtaagctatttccatagtaaa-ggataaaataaagttaaattgtttttgtata 14576727  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| || |||| |||| |||| || ||||| || ||||| |||||||||    
T  14576726 tgctataatttttttttataagctatattagagaactt-tgaaaataagctgaa 14576674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 23445312 - 23445364
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  23445312 gttaaattgtttttgtataagccataagttgttttcataagctatcttggaga 23445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 34290210 - 34290286
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| ||  ||||||||| |||||||| ||||||||||| |||||||| |||| |||||||| |||||||||    
T  34290210 taaagttaattttattttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaa 34290286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 37769756 - 37769680
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| ||||||| ||||||| |||||||||| |||| || ||||| |||||||||||||  ||||||||    
T  37769756 taaagttaaattatttttgtttatgctacaagttgtttttataagctgtcttgcagaatttatgaaaacaagctgaa 37769680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 38018460 - 38018384
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| ||||| |||| ||| ||||||||||   |||||||||||||| |||||| |||||||||    
T  38018460 taaagttaaattgttttcgtataagctagaagctgttttcatacattatcttggagaattcatgaaaataagctgaa 38018384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 49888741 - 49888813
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 320  Q
    ||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||| ||||| |||||||| |||||    
T  49888741 taaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 49888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 7137081 - 7137018
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||||| |||||||| |||||||||    
T  7137081 tttttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaa 7137018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 17830052 - 17830115
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 234  Q
    ||||||||||||||||||||||||||||  ||||| |||| | ||||||||||||||| |||||    
T  17830052 ttatatcacaagcacttatcatgataagcacttatctatacgattacataagctatttttatag 17830115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 37295814 - 37295763
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatctt 299  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||||    
T  37295814 taaagttaaattgttttcgtttaagctataagttgttttcataacctatctt 37295763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 5741560 - 5741622
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctata 233  Q
    ||||| ||||||||| |||||||||||| ||||||||||| | ||||||||||||||| ||||    
T  5741560 ttatagcacaagcacctatcatgataagcgcttatgtataagtttacataagctatttttata 5741622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 46225763 - 46225829
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||| ||| |||||||||||||||| ||||||  |||||||||| |||||||| |||||||||||||    
T  46225763 taaaattagattgtttttgtatatgttataagccgttttcataaactatcttgaagaatttatgaaa 46225829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 1510061 - 1509985
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatctt-ggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||| ||| || ||||  ||||||||||||||||||| |||| |||||||||| |||||||||    
T  1510061 taaagttaaattgtttttg-atacgcgataaactgttttcataacctatcttaggagtatttatgaaaataagctgaa 1509985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 13809972 - 13810045
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||||||||||||||||||||  ||||||| |||| |||| || ||||| || ||||| ||||||    
T  13809972 taaagttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaataagct 13810045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 27970391 - 27970314
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataaccta-tcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| ||| | |||| ||| |||||||| ||| |||||    
T  27970391 taaaattaaattgtttttgtatatgctataagttgtttccataaactatttttggggaacttatgaaaataaactgaa 27970314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 473138 - 473214
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| || |||||||||||||||||| ||||  | | |||||||| |||||||| |||| ||||    
T  473138 taaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaa 473214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 3070029 - 3069973
Alignment:
Q  250 aagttaaattgttttt-gtatatgctataagttgttttcataacctatcttggagaa 305  Q
    |||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  3070029 aagttaaattgtttttcgtatatgctataagctgttttcgtaagctatcttggagaa 3069973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 10809319 - 10809395
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| | ||||||| || ||||||||||||| |||| | |||| |||||||| |||||||| |||||||||    
T  10809319 taaagttaaagtatttttgtgtaagctataagttgttctcatcagctatattggagaacttatgaaaataagctgaa 10809395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 25006130 - 25006074
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    |||||| ||||||||||  |||| |||||||||||||||||||| ||||||||||||    
T  25006130 taaagtcaaattgttttcatataagctataagttgttttcataagctatcttggaga 25006074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 34952189 - 34952265
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| | ||| ||| |||||||||||||||| |||||   ||||| |||||||| |||||||||    
T  34952189 taaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaaaataagctgaa 34952265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 37842451 - 37842375
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| ||| || | ||| |||||||||||||||||||| |||||||| |||| |||| ||| |||||||||    
T  37842451 taaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaa 37842375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 319
Target Start/End: Original strand, 42174770 - 42174900
Alignment:
Q  186 ttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttt 285  Q
    |||| |||||||| ||||||||||| |||| |||| ||||||| ||||  |||||       ||| ||||||  ||||||||||||||||||||||||||    
T  42174770 ttattatgataagggcttatgtataagcttgcataggctatttttatatcaaaagataaag-taatgttaaa--gtttttgtatatgctataagttgttt 42174866  T
Q  286 tcataacctatcttggagaatttatgaaattaag 319  Q
    | ||||  ||| |||||||| |||||||| ||||    
T  42174867 ttataagttatattggagaacttatgaaaataag 42174900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 5720879 - 5720941
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctata 233  Q
    ||||| ||||||||| |||||||||||| ||||||||||| | |||| |||||||||| ||||    
T  5720879 ttataacacaagcacctatcatgataagcgcttatgtataagtttacgtaagctatttttata 5720941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 12287279 - 12287237
Alignment:
Q  257 attgtttttgtatatgctataagttgttttcataacctatctt 299  Q
    ||||||||||||||||||||||||||||||| ||| |||||||    
T  12287279 attgtttttgtatatgctataagttgttttcttaagctatctt 12287237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 6556947 - 6556988
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataa 291  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  6556947 aagttaaattgtttttgtatatgttataagttgtttttataa 6556988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 11893084 - 11893133
Alignment:
Q  161 gataaacagtttatatcacaagcacttatcatgataagtgcttatgtata 210  Q
    ||||||||| |||| ||||||||||||||||||||||| |||| ||||||    
T  11893084 gataaacagcttatgtcacaagcacttatcatgataagcgcttttgtata 11893133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 15477552 - 15477585
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagtt 281  Q
    ||||||||||||||||||||||||||||||||||    
T  15477552 taaagttaaattgtttttgtatatgctataagtt 15477585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 10799436 - 10799512
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| || |||||| || ||||||||||||| |||| | |||  |||||||| |||||||| |||||||||    
T  10799436 taaagttaaagtgcttttgtgtaagctataagttgttctcatcagctacattggagaacttatgaaaataagctgaa 10799512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 14331687 - 14331747
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttcta 231  Q
    ||||| ||||||| ||| ||||||||||  |||||||||| ||| ||||||||||||||||    
T  14331687 ttatagcacaagcgcttctcatgataagcacttatgtataagctaacataagctatttcta 14331747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 17778932 - 17778991
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaattt 308  Q
    |||||| ||||| |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  17778932 taaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaattt 17778991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 29793756 - 29793832
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| ||||||| ||||| |||||||||||  ||||||| ||||||| ||||  |||||||| |||| ||||    
T  29793756 taaagttaagttgttttcgtataagctataagttgagttcataagctatcttcgagagcttatgaaactaagttgaa 29793832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 31517836 - 31517760
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||| |||  |||| |||||||| ||| ||||||| || |||||||||  |||||||| |||||||||    
T  31517836 taaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaa 31517760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 38578501 - 38578549
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctat 296  Q
    |||||||||||| |||||||||| |||||||||||||| ||||| ||||    
T  38578501 taaagttaaattatttttgtataagctataagttgtttacataaactat 38578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 6102153 - 6102204
Alignment:
Q  273 ctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||| ||||||||||| |||||| |||||||||||| || |||||||||    
T  6102153 ctataagctgttttcataagctatctgggagaatttatggaaataagctgaa 6102204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 14331970 - 14332032
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||||| || |  ||||||||||| | || |||||||||||||||    
T  14331970 tttttgtatatgctataagttgtttccaaatgctatcttggaggactt-tgaaattaagctgaa 14332032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 24552497 - 24552454
Alignment:
Q  186 ttatcatgataagtgcttatgtataggcttacataagctatttc 229  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||    
T  24552497 ttatcatgataagcgcttatgtacaagcttacataagctatttc 24552454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 26779996 - 26779945
Alignment:
Q  273 ctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||| |||||||| |||| |||||||| |||| ||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaa 26779945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 49938734 - 49938797
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| ||||||||||||| |||| |||| || ||||| |||||||| |||| ||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaa 49938797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 7244746 - 7244688
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||| ||||| |||||| ||||||||||||| | |||||||||||  |||||||    
T  7244746 aattgttttcgtataagctatacgttgttttcataagcgatcttggagaacgtatgaaa 7244688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 12564569 - 12564519
Alignment:
Q  274 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||||| ||||||||||||| ||||| || |||||||||    
T  12564569 tataggttgttttcataagctatcttggagaacttatggaaataagctgaa 12564519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 17834158 - 17834208
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataa 221  Q
    ||||| |||||||||||||||||||||||| ||||| ||| ||||| ||||    
T  17834158 ttatagcacaagcacttatcatgataagtgtttatgcataagcttatataa 17834208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 30581776 - 30581814
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgtttt 286  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  30581776 taaagttaaattgtttttttatatgctataagttttttt 30581814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 33186241 - 33186283
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataa 291  Q
    ||||||||||| || ||||||||||||||||||||||| ||||    
T  33186241 aaagttaaatttttcttgtatatgctataagttgtttttataa 33186283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 36872716 - 36872782
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| |||||||||||||||| | || |||| ||| |||| |||||||| |||| ||||    
T  36872716 ttgtttttgtatgtgctataagttgtttttacaagctatattgcagaacttatgaaaataagttgaa 36872782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 37631649 - 37631579
Alignment:
Q  254 taaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||| |||| ||| || ||||||  ||| |||| |||||||| |||||||| |||||||||    
T  37631649 taaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaa 37631579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 7107606 - 7107537
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||||  ||||| ||| | |||| ||| |||| |||||| | |||||||||    
T  7107606 aaattgtttttgtatatgctataaactgtttccattaactattttgtagaacttatgacaataagctgaa 7107537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 11218038 - 11218001
Alignment:
Q  251 agttaaattgtttttgtatatgctataagttgttttca 288  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  11218038 agttaaattgttttcgtataagctataagttgttttca 11218001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 14630043 - 14629986
Alignment:
Q  267 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| |||||||| | ||||||||| |||||||||||| |||||| || |||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaa 14629986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 25479574 - 25479631
Alignment:
Q  267 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| |||||||||||||||||||| ||||| | ||||  |||||||| |||||||||    
T  25479574 tataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaa 25479631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 35590977 - 35590912
Alignment:
Q  259 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| ||||||||| | |||||||| ||||| ||||||  ||||| || |||||||||    
T  35590977 tgtttttgtataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaa 35590912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 37473311 - 37473360
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctatag 234  Q
    |||||||||| |||  |||||||||| ||||||||||||||||| |||||    
T  37473311 cttatcatgacaagcacttatgtataagcttacataagctatttttatag 37473360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 37517290 - 37517233
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||||||||||||  |||||||| |||| |||| |||| || |||||    
T  37517290 taaagttaaattgtttttgtatatattataagttattttaataagctatattagagaa 37517233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 38247351 - 38247404
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagct 224  Q
    ||||| |||||||||||||||||||| |  |||||||||| ||| |||||||||    
T  38247351 ttatagcacaagcacttatcatgatatgcacttatgtataagctcacataagct 38247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 39596578 - 39596627
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    |||||||||||||||| |||||||| || ||| |||| ||||||||||||    
T  39596578 aaattgtttttgtataagctataagatggttttataagctatcttggaga 39596627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 286
Target Start/End: Original strand, 42391344 - 42391377
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgtttt 286  Q
    ||||||||||||||||||| ||||||||||||||    
T  42391344 ttaaattgtttttgtatattctataagttgtttt 42391377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 44932092 - 44932002
Alignment:
Q  183 cacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctata 277  Q
    ||||||||||||||||  |||| ||||| |||| ||||| |||| | ||||| |||||        |||||||||||||||||||||||||||||    
T  44932092 cacttatcatgataagcacttaggtataagcttgcataaactatatttatagcaaaagataa----aaagttaaattgtttttgtatatgctata 44932002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 1510398 - 1510330
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||| | ||||||||||||| |||| || | |||||||| ||| |||| |||| ||||    
T  1510398 aattgtttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagttgaa 1510330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 4576779 - 4576855
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| | |||||||| | | |||||| ||||||||||| |||| ||| | || |||||||| |||||||||    
T  4576779 taaagttaaaatatttttgtacaagttataagctgttttcataagctatattgaataacttatgaaaataagctgaa 4576855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 17269224 - 17269280
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    |||||| ||||||||||  |||| || ||||||||||||||||| ||||| ||||||    
T  17269224 taaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggaga 17269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 28287798 - 28287834
Alignment:
Q  262 ttttgtatatgctataagttgttttcataacctatct 298  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  28287798 ttttgtataagctataagttgttttcataacatatct 28287834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 30582044 - 30581996
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctat 296  Q
    ||||||||| |||||||||||||||||| ||| |||||| |||| ||||    
T  30582044 taaagttaacttgtttttgtatatgctacaagctgtttttataagctat 30581996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 42391278 - 42391326
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctata 233  Q
    |||||||||||||||||||||||||| |||| | ||| |||||| ||||    
T  42391278 cttatcatgataagtgcttatgtataagcttgcttaaactatttttata 42391326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 42556713 - 42556665
Alignment:
Q  262 ttttgtatatgctataagttgttttcataacctatcttggagaatttat 310  Q
    |||| |||| |||||||||||||||||||| ||||| |||||| |||||    
T  42556713 ttttatataagctataagttgttttcataagctatcatggagagtttat 42556665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 51160585 - 51160509
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||| ||| ||||| |||||| |||||||| | |||||||||  |||||  |||| ||||||| |||||||||||    
T  51160585 taaagtcaaactgtttctgtataagctataagctattttcataagttatctcagagagtttatgatattaagctgaa 51160509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 25930696 - 25930574
Alignment:
Q  201 cttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    |||||||||| ||||||||||||||||||||||||||| |       |||| ||||| |||||||||||||||| ||| |||||||||||| ||||||||    
T  25930696 cttatgtataagcttacataagctatttctataggaaa-ggatgaaataaaattaaaatgtttttgtatatgctttaaattgttttcataagctatcttg 25930598  T
Q  301 gagaatttatgaaattaagctgaa 324  Q
    ||||| || ||| | |||||||||    
T  25930597 gagaacttgtgatagtaagctgaa 25930574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 323
Target Start/End: Complemental strand, 29168224 - 29168078
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| |||||||  ||||||| | ||||||||||||||| ||| ||||||||||||||||||| |||||       |||| | ||||| ||||||||||    
T  29168224 ttatagcacaagcgtttatcatcaaaagtgcttatgtataagctcacataagctatttctatagcaaaag------ataaaataaaattatttttgtata 29168131  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctga 323  Q
    ||||||||| ||||||| | | ||||||||||||| ||||| || ||||||||    
T  29168130 tgctataagctgttttcctgagctatcttggagaacttatggaaataagctga 29168078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 324
Target Start/End: Original strand, 27028751 - 27028881
Alignment:
Q  185 cttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgtt 284  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||| ||||  ||          | |||||||||||||| ||||||||||||||| ||||    
T  27028751 cttatcatgataagtgcttttgtataagcttacataagttatttttataacaa---------ctgaagttaaattgtttgtgtatatgctataagctgtt 27028841  T
Q  285 ttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||| ||||||||||||  |||||||| |||||||||    
T  27028842 ttcataagctatcttggagagcttatgaaaataagctgaa 27028881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 29205784 - 29205848
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  29205784 aagttaaattgtttttgtatatgctataagttattttcataaactattttggagaatttatgaaa 29205848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 10758428 - 10758304
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||| |||||||||||||||||||| ||||||||| ||| || ||| |||||||||||| |||         |||||||||||||||||||||||    
T  10758428 ttatagcactagcacttatcatgataagtgattatgtataagctcacgtaaactatttctatagcaaat-cataaaataaagttaaattgtttttgtata 10758330  T
Q  271 tgctataagttgttttcataacctat 296  Q
    ||||||||||||| || |||| ||||    
T  10758329 tgctataagttgtctttataagctat 10758304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 305
Target Start/End: Complemental strand, 42043536 - 42043384
Alignment:
Q  153 ccctgtttg-ataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaa 251  Q
    ||||||||| |||||||| |||| ||||||   ||||| | ||||||  |||||||||| ||||||||| ||||||||||||| |||||       |  |    
T  42043536 ccctgtttggataaacagcttatgtcacaactgcttattacgataagcacttatgtataagcttacatatgctatttctatagcaaaagataaaa-tgca 42043438  T
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||| ||||| |||||||||||||||||| ||||||| |||||    
T  42043437 gttaaattgtttttggatatgatataagttgttttcataagctatcttagagaa 42043384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 324
Target Start/End: Original strand, 12976117 - 12976262
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctat 276  Q
    |||| ||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||        ||||||||||||  |||| |||||||||     
T  12976117 cacaggcactcatcatgataagcgcttatgtataagctcacataagctatttctatagcaaaa-tataaaataaagttaaattaattttttatatgctac 12976215  T
Q  277 aagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    || ||||||| |||| |||| || ||||| |||||||| |||||||||    
T  12976216 aatttgtttttataagctatattagagaacttatgaaa-taagctgaa 12976262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 38750267 - 38750380
Alignment:
Q  182 gcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagtt 281  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||| |||||| | ||       ||| |||||| |||||||||||||| ||||||||    
T  38750267 gcacttatcatgataagcgcttatgtataagcttgcataagctatttttataggcagag-aaaaaataatgttaaaatgtttttgtatatgatataagtt 38750365  T
Q  282 gttttcataacctat 296  Q
    ||||| |||| ||||    
T  38750366 gtttttataagctat 38750380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 171 - 320
Target Start/End: Complemental strand, 1058246 - 1058100
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||| ||||  |||||||| ||||||||||| ||||||||||||||||| |||| | |||        |||||||||  ||||||||||||    
T  1058246 ttatagcacaagcgcttactatgataagcgcttatgtataagcttacataagctatttttata-gcaaatcataaaataaagttaatctgtttttgtata 1058148  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagc 320  Q
    ||||||||| | |||||| |   |||||||||||| |||||||| |||||    
T  1058147 tgctataagctattttcaca--ttatcttggagaacttatgaaaataagc 1058100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 38648325 - 38648394
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaatta 317  Q
    |||| |||| ||||||||||||||| ||| |||||||||||||| |||||||| |||| |||||||||||    
T  38648325 taaaattaacttgtttttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaatta 38648394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 37353345 - 37353269
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||| ||||||| ||||  |||||||| ||| |||||    
T  37353345 taaagttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaa 37353269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 9956884 - 9956834
Alignment:
Q  274 tataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaa 9956834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 18133632 - 18133706
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| |||||||||| ||||||| || ||| |||| |||| |||||||| |||||||| |||||||||    
T  18133632 aagttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaa 18133706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 24558829 - 24558883
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    |||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||    
T  24558829 aagttaaattattttcgtataagctataagttgttttcataagctatcttggaga 24558883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 291
Target Start/End: Original strand, 16734003 - 16734046
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataa 291  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  16734003 taaacttaaattgtttttgtatatgctataagttgttttgataa 16734046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 32975964 - 32976027
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 240  Q
    |||||||| |||| ||||||||||||||| |||| |||| |||||||||||| ||||| |||||    
T  32975964 cacaagcagttattatgataagtgcttatatataagcttgcataagctatttttatagcaaaag 32976027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 302
Target Start/End: Original strand, 8146229 - 8146358
Alignment:
Q  178 acaagcacttatcatgataagtgcttatgtatag----gcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgta---ta 270  Q
    |||| ||||||||||||||| ||||||| ||||     ||||||||||||| |||||||||||||||       || |||||| |||||||||||   ||    
T  8146229 acaaacacttatcatgataaatgcttatatatatataagcttacataagctttttctataggaaaag--taaattatagttaagttgtttttgtatatta 8146326  T
Q  271 tgctataagttgttttcataacctatcttgga 302  Q
    | |||||| |||||||||||| ||||||||||    
T  8146327 tactataatttgttttcataagctatcttgga 8146358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 32841391 - 32841341
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatg 311  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||| |||||    
T  32841391 tttttgtataagctataagctgttttcataagctatcttggagaagttatg 32841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 320
Target Start/End: Original strand, 38602309 - 38602379
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 320  Q
    ||||||||||| ||||| |||||||||||| |||||| |||| ||||  |||||||||| ||||| |||||    
T  38602309 aagttaaattgcttttgcatatgctataagctgtttttataagctatactggagaatttgtgaaaataagc 38602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 10120733 - 10120806
Alignment:
Q  251 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||| |||||  ||||||| ||||| ||| | |||| |||||||| |||||||| |||||||||    
T  10120733 agttaaattgttttggtataacctataagctgtttacattaactatattggagaacttatgaaaataagctgaa 10120806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 35534707 - 35534637
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 320  Q
    |||||||||||||||||||||| |  |||| |||||||||||||  ||| |||||||| |||||||| |||||    
T  35534707 taaagttaaattgtttttgtatgt--tatatgttgttttcataagttatattggagaacttatgaaagtaagc 35534637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 16210982 - 16210906
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| ||||||||  |||| ||||||||||||||||| ||||||||| |  ||| ||| |||| |||||||||    
T  16210982 taaagttacattgttttcatataagctataagttgttttcaaaacctatctagtggaacttacgaaaataagctgaa 16210906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 26771239 - 26771315
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||||||||||||||||||| | |||| ||||  ||| || ||||| |||||||| |||| ||||    
T  26771239 taaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaa 26771315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 30251540 - 30251476
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctg 322  Q
    ||||| ||||||||| |||||| ||||||||||| ||||||||||  | |||||||| |||||||    
T  30251540 ttgttattgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctg 30251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 43504733 - 43504801
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| ||| | |||||||| |||||| |||| ||||||||||||| ||||| || |||||||||    
T  43504733 aattgttttagtagaagctataagatgtttttataagctatcttggagaacttatggaaataagctgaa 43504801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 12010870 - 12010917
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaa 305  Q
    |||||||||| ||||||||||||||||||||||| || | ||||||||    
T  12010870 ttgtttttgtgtatgctataagttgttttcataatctgtattggagaa 12010917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 37945489 - 37945544
Alignment:
Q  173 atatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 228  Q
    |||||||||||||||||||| |||| ||||||| |||| |||| | ||||||||||    
T  37945489 atatcacaagcacttatcataataaatgcttatctataagcttgcttaagctattt 37945544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 8062317 - 8062379
Alignment:
Q  262 ttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||||  ||||| || |||||||||    
T  8062317 ttttgtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaa 8062379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 314
Target Start/End: Original strand, 11861735 - 11861844
Alignment:
Q  201 cttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    |||||||||| ||| ||||||||||||||||||| ||| |       ||||||||| ||   |||||||||||||||||||||||| |||| ||||  |     
T  11861735 cttatgtataagctcacataagctatttctatagcaaa-gaacaaaataaagttaattt---tttgtatatgctataagttgtttttataagctataata 11861830  T
Q  301 gagaatttatgaaa 314  Q
    ||||| ||||||||    
T  11861831 gagaacttatgaaa 11861844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 14242886 - 14242952
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||||||||||| ||||| ||| |||||||   |||||||||| ||||| ||||||| ||||||||    
T  14242886 taaagttaaattgattttgcataagctataacacgttttcataaactatcatggagaagttatgaaa 14242952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 34290857 - 34290919
Alignment:
Q  262 ttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| |||||||||||||  ||| ||||| |||||| || |||||| |||||||||    
T  34290857 ttttgtatatgttataagttgtttttctaatctatcctggagagttaatgaaaataagctgaa 34290919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 38353235 - 38353305
Alignment:
Q  158 tttgataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 228  Q
    |||||||  ||| |||||| |||||  |||||||||||||  ||||||||||| |||| ||||||||||||    
T  38353235 tttgatatgcagcttatattacaagtgcttatcatgataatcgcttatgtataagcttgcataagctattt 38353305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 4526405 - 4526360
Alignment:
Q  194 ataagtgcttatgtataggcttacataagctatttctataggaaaa 239  Q
    ||||| |||| ||||||||||||||||| |||||||||||| ||||    
T  4526405 ataagcgcttgtgtataggcttacataaactatttctatagcaaaa 4526360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 6881908 - 6881972
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagc 320  Q
    ||||||||||| ||||||||||||| |||||| |||| |||  |||||||| |||||||| |||||    
T  6881908 aaattgtttttatatatgctataagctgtttt-ataagctaaattggagaacttatgaaaataagc 6881972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 9834878 - 9834833
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    ||||||||||  |||| |||||||||||||||||||| ||||||||    
T  9834878 aaattgttttcatataagctataagttgttttcataagctatcttg 9834833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 14956467 - 14956410
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctattt 228  Q
    ||||| ||||| | ||||||||||||||  |||||||||| |||| ||||||||||||    
T  14956467 ttatagcacaatcgcttatcatgataagcacttatgtataagcttgcataagctattt 14956410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 16736063 - 16736124
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||||| ||||||||| ||| |||||||||| || |||| |||| ||||| |||||||||||    
T  16736063 ttaaatagtttttgtacatgttataagttgtctttataaactatattggaaaatttatgaaa 16736124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 324
Target Start/End: Complemental strand, 28769416 - 28769359
Alignment:
Q  267 tatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| |||||||| ||||||||||| |||| ||||||| |||||| || |||||||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaa 28769359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 29891114 - 29891061
Alignment:
Q  251 agttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    ||||| |||||||| |||||  || |||||||||||||||| ||||||||||||    
T  29891114 agttatattgttttagtataaactgtaagttgttttcataagctatcttggaga 29891061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 31916523 - 31916568
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggctta 216  Q
    |||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  31916523 ttatgtcataagcacttatcatgataagcgcttatgtataagctta 31916568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 6509399 - 6509343
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    |||||| ||||||| ||| |||| |||||||| ||||||||||| ||||| ||||||    
T  6509399 taaagtcaaattgtatttatataagctataagctgttttcataagctatcctggaga 6509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 7918869 - 7918817
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    |||||||||||| ||||  | || |||||||||||||||||||| ||||||||    
T  7918869 taaagttaaatttttttcttgtaagctataagttgttttcataagctatcttg 7918817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 21653055 - 21653131
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||| ||| || || |||| || ||| |||||| | ||||||||||||  |||||||| |||||||||    
T  21653055 taaagttaaattgatttcgtgtaggctacaaattgctttcattagctatcttggagagcttatgaaaataagctgaa 21653131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 28710103 - 28710063
Alignment:
Q  48 tttggtaaaaatagcagatagttgataacttagcttatagc 88  Q
    ||||||||||||||| |||||||||||| |||||| |||||    
T  28710103 tttggtaaaaatagcggatagttgataagttagctgatagc 28710063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 28717450 - 28717410
Alignment:
Q  48 tttggtaaaaatagcagatagttgataacttagcttatagc 88  Q
    ||||||||||||||| |||||||||||| |||||| |||||    
T  28717450 tttggtaaaaatagcggatagttgataagttagctgatagc 28717410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 41314344 - 41314296
Alignment:
Q  40 tgactctatttggtaaaaatagcagatagttgataacttagcttatagc 88  Q
    ||||||| ||||||||||||||| ||||| |||||| |||||| |||||    
T  41314344 tgactctgtttggtaaaaatagcggatagctgataagttagctgatagc 41314296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 41442585 - 41442553
Alignment:
Q  183 cacttatcatgataagtgcttatgtataggctt 215  Q
    ||||||||||||||||| |||||||||||||||    
T  41442585 cacttatcatgataagtacttatgtataggctt 41442553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 43718020 - 43717960
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    |||||| ||| | |||||| ||||| ||||| ||||||||||||| |||||||| ||||||    
T  43718020 tttttggataagttataagctgtttgcataagctatcttggagaacttatgaaagtaagct 43717960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 324
Target Start/End: Original strand, 25460990 - 25461141
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| || ||||||||||||||||||| |||||| |||| |||| | |||||||||| | ||| |||||       |||||||  ||||||||||||||    
T  25460990 ttatagcataagcacttatcatgataagagcttatatataagcttgcgtaagctatttttctagcaaaagataaa--taaagttgtattgtttttgtata 25461087  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    || |||||||||||||||||| || | |||||||| | |||||| |||||||||    
T  25461088 tgttataagttgttttcataagctctattggagaactgatgaaaataagctgaa 25461141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 10272525 - 10272451
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| |||||||||| ||||| |||||||||||||||||||| | |||||||||| ||||||||| |||||||||    
T  10272525 aagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaa 10272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 324
Target Start/End: Complemental strand, 16458143 - 16457999
Alignment:
Q  178 acaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctata 277  Q
    |||||| |||||| |||||||||||||| |||| |||| |||||||||||| ||||| |||||         || |||||||||||||||||||||||||    
T  16458143 acaagctcttatcctgataagtgcttatatataagcttgcataagctatttttatagcaaaagataaaat--aacttaaattgtttttgtatatgctata 16458046  T
Q  278 agttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||| || | |||  |||||||| || ||||| ||| |||||    
T  16458045 agttgtttttatgagctaaattggagaacttgtgaaaataaactgaa 16457999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 305
Target Start/End: Original strand, 31038195 - 31038325
Alignment:
Q  169 gtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgta 268  Q
    ||||||| |||| || |||||||||||||||| |||| |||| |||||||||| || ||||||| | |||||       |||| | |||||||||| |||    
T  31038195 gtttatagcacatgcgcttatcatgataagtgattatctataagcttacataatctgtttctatggcaaaaga------taaaataaaattgttttcgta 31038288  T
Q  269 tatgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||||| ||||| |||| ||||||||    
T  31038289 tatgctataagttgtttccataaactattttggagaa 31038325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 305
Target Start/End: Original strand, 31047419 - 31047549
Alignment:
Q  169 gtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgta 268  Q
    ||||||| |||| || |||||||||||||||| |||| |||| |||||||||| || ||||||| | |||||       |||| | |||||||||| |||    
T  31047419 gtttatagcacatgcgcttatcatgataagtgattatctataagcttacataatctgtttctatggcaaaaga------taaaataaaattgttttcgta 31047512  T
Q  269 tatgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||||| ||||| |||| ||||||||    
T  31047513 tatgctataagttgtttccataaactattttggagaa 31047549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 12425545 - 12425621
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| ||||| |||||||| |||||||| || ||||||||||||| |||||||| |||| ||||    
T  12425545 taaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaa 12425621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 16937975 - 16937903
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||||||||||||||||||||| |||  |||| |||||||| ||| |||| |||||||||    
T  16937975 gttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaa 16937903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 305
Target Start/End: Original strand, 31051796 - 31051924
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||  ||||||||||||| || |||| |||| ||||||||||||| ||||||| | |||||       |||| |||||||||||| |||||    
T  31051796 ttatagcacaagtgcttatcatgataaatgattatctataagcttacataagctgtttctatggcaaaaga------taaaattaaattgttttggtata 31051889  T
Q  271 tgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||| | ||| |||| ||||||||    
T  31051890 tgctataagttgtttccgtaaactattttggagaa 31051924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 12554494 - 12554541
Alignment:
Q  249 aaagttaaattgtttttgtatatgctataagttgttttcataacctat 296  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  12554494 aaagttaaattgtttttgtatatgctataagttgtttttataacctat 12554541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 39105440 - 39105511
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||||| ||||| |||||||  ||||||||||| ||||||||||||| |||||||| ||||||    
T  39105440 aagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagct 39105511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 321
Target Start/End: Original strand, 10639866 - 10640000
Alignment:
Q  186 ttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttt 285  Q
    |||||| ||||||  |||||||||| |  || ||||||||||||||||| |||||       |||| ||||||||||||||||||||  || ||||||||    
T  10639866 ttatcacgataagcacttatgtataagtctatataagctatttctatagcaaaagataaaattaaa-ttaaattgtttttgtatatgtgatgagttgttt 10639964  T
Q  286 tcataacctatcttggagaatttatgaaattaagct 321  Q
     ||||| |||| |||||||| |||||||| ||||||    
T  10639965 acataaactattttggagaacttatgaaaataagct 10640000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 32703370 - 32703296
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| ||| |||||  |||||||||||||||||||| |||||| ||||||||||| ||| |||||||||    
T  32703370 taaagttaaattatttctgtat--gctataagttgttttcataagctatctaggagaatttataaaaataagctgaa 32703296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 25461404 - 25461336
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| ||| |||||||  ||||||||||||||||||||| | |||||||||| |||||||||    
T  25461404 aattgtttttgcataagctataaactgttttcataacctatcttggcgtatttatgaaaataagctgaa 25461336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 29925819 - 29925891
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| ||||| ||||||||||||||| ||||| |||| |||||||| |||||||| |||| ||||    
T  29925819 gttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataagttgaa 29925891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 305
Target Start/End: Original strand, 32372522 - 32372655
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| ||||||||||||||||||||||  ||||||||||  ||||||||| |||||  ||||| |   |       ||||||| |||||||||||||||    
T  32372522 ttatagcacaagcacttatcatgataagcccttatgtatacacttacataaactattattatagcacctgataaaa-taaagttgaattgtttttgtata 32372620  T
Q  271 tgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||| |||||||| ||  ||||||||||||    
T  32372621 tgctataagctgttttcacaagttatcttggagaa 32372655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 315
Target Start/End: Original strand, 17652235 - 17652302
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaat 315  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||| ||| | || |||||||||    
T  17652235 taaagttaaattgcttttgtatatactataagttgttttcataagctatgttgaacaacttatgaaat 17652302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 36318761 - 36318824
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| | | |||||||||||||||| ||||||||||||||||||| || |||||||||    
T  36318761 tttttgtataagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaa 36318824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 43300865 - 43300928
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||||| |||||||| |||||||||    
T  43300865 tttttgtatatcctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaa 43300928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 3735648 - 3735594
Alignment:
Q  186 ttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaag 240  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||||||| |||||    
T  3735648 ttatcatgataagcgcttatggataagcttacataagctatttctatagcaaaag 3735594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 2568632 - 2568705
Alignment:
Q  249 aaagttaaattgttttt-gtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||  | |||||| ||||||    
T  2568632 aaagttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagct 2568705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 7319188 - 7319123
Alignment:
Q  166 acagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttcta 231  Q
    |||| ||||| ||||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||    
T  7319188 acagcttatagcacaagcgcttatcatgataagcacttatgcataagcttacataagctatttcta 7319123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 321
Target Start/End: Complemental strand, 24030574 - 24030424
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaatt-gtttttgtat 269  Q
    ||||| |||||||||||||||||||||||||   |||||| ||| |||||||||||| |||||| ||  |       ||||||||||||  |||||| ||    
T  24030574 ttatagcacaagcacttatcatgataagtgcgcgtgtataagctcacataagctattgctatagcaaccg-ataaaataaagttaaattattttttggat 24030476  T
Q  270 atgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||| ||||||||||||| |||| |||| || || || |||||||| ||||||    
T  24030475 atgttataagttgtttttataagctatattagataacttatgaaaataagct 24030424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 26005410 - 26005349
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctat 232  Q
    ||||| ||||| ||||||| ||||||| |||||||||||| |||| ||||||||||||||||    
T  26005410 ttatagcacaaacacttattatgataattgcttatgtataagcttgcataagctatttctat 26005349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 32942605 - 32942658
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  32942605 tttttttatatgctataagctgttttcataagctatcttggagaacttatgaaa 32942658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 7319380 - 7319456
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||  |||| |||||||  ||||||| ||| ||||||||||||| |||| ||| |||||||||    
T  7319380 taaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaa 7319456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 7674622 - 7674698
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||||||||||||  |||| || ||||  ||||||||||| |||||||||||||||| ||||| |||||||||    
T  7674622 taaatttaaattgttttcttataagccataaaatgttttcataagctatcttggagaatttgtgaaaataagctgaa 7674698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 7984967 - 7985019
Alignment:
Q  272 gctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| | ||||||||| |||||||||||||||||||||| |||||||||    
T  7984967 gctataagcttttttcataagctatcttggagaatttatgaaaataagctgaa 7985019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 32009668 - 32009732
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||| ||||||| ||||||||||||||| ||||||| |||| |||| |||||||| ||||||||    
T  32009668 aagttgaattgttcttgtatatgctataaattgtttttataagctatattggagaacttatgaaa 32009732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 7907868 - 7907931
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| | ||||||||||||| |||| || |||||||||  ||||||||||||||||||    
T  7907868 tttttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaa 7907931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 25461927 - 25461864
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 234  Q
    ||||| ||||||| |||||||||||||||| |||| |||| |||| |||||||||||| |||||    
T  25461927 ttataacacaagcgcttatcatgataagtggttatatataagcttgcataagctatttttatag 25461864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 36325998 - 36326061
Alignment:
Q  261 tttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||| | ||||||||| |||| ||| ||||||||||||||||||| || |||||||||    
T  36325998 tttttgtataagttataagttgctttcgtaagctatcttggagaatttatgtaaataagctgaa 36326061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 42646891 - 42646954
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaa 313  Q
    |||||||||||||||||| || |||||||| ||||||||||| | ||||||||||  |||||||    
T  42646891 aagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggagagcttatgaa 42646954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 6587195 - 6587129
Alignment:
Q  256 aattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctg 322  Q
    ||||||||| ||||| |||||||||||||||||||| ||||  ||||||| || ||||| |||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctg 6587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 9202844 - 9202770
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctg 322  Q
    |||||||||||||||||  |||| || ||||| |||||||||||  ||||||| |||| |||||||| |||||||    
T  9202844 taaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctg 9202770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 17368652 - 17368726
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||  ||||| || |||||||||    
T  17368652 aagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaa 17368726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 319
Target Start/End: Complemental strand, 25461818 - 25461672
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtata 270  Q
    ||||| |||| || ||| |||||||||||| |||| |||| |||| |||||||||||| ||||| |||||       ||  ||||||||| ||| |||||    
T  25461818 ttataacacaggctcttctcatgataagtggttatatataagcttgcataagctatttttatagcaaaag--ataaatatcgttaaattggtttagtata 25461721  T
Q  271 tgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    || ||||||||||||| |||| || | |||||||| |||| ||| ||||    
T  25461720 tgttataagttgtttttataagctctattggagaacttattaaaataag 25461672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 34102406 - 34102344
Alignment:
Q  252 gttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||| ||||||||||||||||||||||||||||| |||| | || |||||||| | ||||||    
T  34102406 gttaatttgtttttgtatatgctataagttgtttttataagccatgttggagaactcatgaaa 34102344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 4014493 - 4014444
Alignment:
Q  275 ataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||| ||||||||||| ||||||||||||| |||||||| |||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaa 4014444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 40439121 - 40438983
Alignment:
Q  177 cacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctat-aggaaaagnnnnnnntaaagttaaattgtttttgtatatgcta 275  Q
    ||||||| |||||| ||||| |  || ||||||| ||||||||||||||||||||| |  ||||        ||||||||||||| |||| | || | ||    
T  40439121 cacaagcgcttatcttgataggcactcatgtataagcttacataagctatttctattaaaaaaattatgaaataaagttaaattgattttctgtaggtta 40439022  T
Q  276 taagttgttttcataacctatcttggagaatttatgaaa 314  Q
    |||| ||||||||| |||||||||||||||  |||||||    
T  40439021 taagctgttttcatgacctatcttggagaacatatgaaa 40438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 1130854 - 1130930
Alignment:
Q  158 tttgataaacagtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctatag 234  Q
    |||||||||||  ||||| ||||| || |||| |||||||| |||| |||||| ||||| |||||| ||||||||||    
T  1130854 tttgataaacaacttatagcacaaacatttattatgataagcgcttgtgtataagcttatataagccatttctatag 1130930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 28776978 - 28777038
Alignment:
Q  259 tgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaag 319  Q
    |||||| ||||| |||||||| ||||||||||| ||||||||||||| | |||||| ||||    
T  28776978 tgttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataag 28777038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 34205213 - 34205265
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttg 300  Q
    |||||| ||||| ||||| |||| |||||||||||||||||||| ||||||||    
T  34205213 taaagtcaaattatttttatataagctataagttgttttcataagctatcttg 34205265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 36797248 - 36797200
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacat 219  Q
    ||||| |||||||||||||||| |||| |||||||||||| ||||||||    
T  36797248 ttatagcacaagcacttatcattataactgcttatgtataagcttacat 36797200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 443921 - 443964
Alignment:
Q  260 gtttttgtatatgctataagttgttttcataacctatcttggag 303  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||    
T  443921 gtttttgtataagctataagatgttttcataagctatcttggag 443964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 3520360 - 3520399
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcat 289  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  3520360 aagttaaattgtttttggatatactataagttgttttcat 3520399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 34736652 - 34736561
Alignment:
Q  217 cataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttat 310  Q
    |||||||||||||||||| |||||       ||||| |||||| |||||||||| |||||||  |||| |||| | ||||||||||||||||||    
T  34736652 cataagctatttctatagcaaaagagaaa--taaagctaaattatttttgtataagctataaactgttatcattagctatcttggagaatttat 34736561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 5559704 - 5559750
Alignment:
Q  253 ttaaattgtttttgtatatgctataagttgttttcataacctatctt 299  Q
    |||||||||||| ||||| |||||||||||||||||| | |||||||    
T  5559704 ttaaattgttttagtataagctataagttgttttcattagctatctt 5559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 323
Target Start/End: Complemental strand, 7319071 - 7319029
Alignment:
Q  281 tgttttcataacctatcttggagaatttatgaaattaagctga 323  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||    
T  7319071 tgttttcataagctatcttggagaacttatgaaaataagctga 7319029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 18543282 - 18543217
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||| |||| | |||||||||||||||||| ||||| ||||||  |||||||| |||||||||    
T  18543282 ttgtttttatataagatataagttgttttcataagctatcctggagagcttatgaaa-taagctgaa 18543217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 23994802 - 23994736
Alignment:
Q  258 ttgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||||||||||||| | |||||| || |||||||| |||| |||| ||| |||| ||||    
T  23994802 ttgtttttgtatatgctataagctattttcacaagctatcttgtagaaattataaaaataagttgaa 23994736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 28776892 - 28776922
Alignment:
Q  180 aagcacttatcatgataagtgcttatgtata 210  Q
    |||||||||||||||||||||||||||||||    
T  28776892 aagcacttatcatgataagtgcttatgtata 28776922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 285
Target Start/End: Complemental strand, 29815176 - 29815146
Alignment:
Q  255 aaattgtttttgtatatgctataagttgttt 285  Q
    |||||||||||||||||||||||||||||||    
T  29815176 aaattgtttttgtatatgctataagttgttt 29815146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 35445933 - 35445863
Alignment:
Q  254 taaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| ||||| | |||||| |||| |  ||| |||||||||||||||||||||| |||| ||||    
T  35445933 taaattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataaggtgaa 35445863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 42582789 - 42582707
Alignment:
Q  248 taaagttaaattgtttttgtatatgctata-----agttgttttcataacctatcttggagaatttatgaaattaagctgaat 325  Q
    |||| ||||||| |||||||||||||||||     || ||||||||||| ||||||||| ||| ||| |||| ||||||||||    
T  42582789 taaatttaaattatttttgtatatgctatagtataagctgttttcataatctatcttggtgaacttacgaaaataagctgaat 42582707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 40426739 - 40426812
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||| |||||||||||||||| |||| |||| ||||| | ||| || |||||||||| ||| |||| ||||||    
T  40426739 taaagctaaattgtttttgtatttgctgtaagctgtttccgtaagctgtcttggagaacttacgaaaataagct 40426812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 41981961 - 41981888
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagct 321  Q
    ||||| |||| ||||||||||||  ||||||| ||||||||||| |||| || ||||| ||| |||| ||||||    
T  41981961 taaagctaaaatgtttttgtataaactataagctgttttcataaactatttttgagaacttacgaaaataagct 41981888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 1465115 - 1465040
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||| | |||||| || |||||||||| |||| |||| ||||||||||| | || ||||| |||||||||    
T  1465115 taaagttaaatcgcttttgtgtaagctataagttatttt-ataagctatcttggaggacttgtgaaaataagctgaa 1465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 2563186 - 2563250
Alignment:
Q  250 aagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaa 314  Q
    ||||| ||||||||||||||| |||||||  | |||||| || |||||||||||| | |||||||    
T  2563186 aagttcaattgtttttgtataagctataaactattttcacaagctatcttggagagtctatgaaa 2563250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 17652172 - 17652212
Alignment:
Q  192 tgataagtgcttatgtataggcttacataagctatttctat 232  Q
    ||||||||||||| ||||| |||| ||||||||||||||||    
T  17652172 tgataagtgcttaagtatacgctttcataagctatttctat 17652212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 18857496 - 18857440
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggaga 304  Q
    |||||| ||||||||||| ||||  ||||||| ||||||||||| || |||||||||    
T  18857496 taaagtcaaattgtttttctataatctataagctgttttcataagctgtcttggaga 18857440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Original strand, 36145277 - 36145309
Alignment:
Q  273 ctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||||||| |||||||||||||    
T  36145277 ctataagttgttttcataagctatcttggagaa 36145309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 42583123 - 42583199
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    ||||||||||||||||| || || |  ||||| |||||||||||  |||| ||||||| |||||||  |||||||||    
T  42583123 taaagttaaattgttttcgtgtaagggataagctgttttcataatttatcgtggagaacttatgaatgtaagctgaa 42583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 1141 - 1011
Alignment:
Q  169 gtttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaagnnnnnnntaaagttaaattgtttttgta 268  Q
    ||||||| |||| || |||||||||||||||| |||| |||| |||||||||| || ||||||| | |||||       |||| | |||||||||| |||    
T  1141 gtttatagcacatgcgcttatcatgataagtgattatctataagcttacataatctgtttctatggcaaaaga------taaaataaaattgttttcgta 1048  T
Q  269 tatgctataagttgttttcataacctatcttggagaa 305  Q
    ||||||||||||||||| ||||| |||| ||||||||    
T  1047 tatgctataagttgtttccataaactattttggagaa 1011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 158005 - 158073
Alignment:
Q  171 ttatatcacaagcacttatcatgataagtgcttatgtataggcttacataagctatttctataggaaaa 239  Q
    ||||| ||||| ||||||| ||||||| |||||||| ||  ||||||||||||||||| ||||| ||||    
T  158005 ttatagcacaaacacttatgatgataattgcttatgcattagcttacataagctatttttatagaaaaa 158073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 178421 - 178345
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttggagaatttatgaaattaagctgaa 324  Q
    |||||||||||| || | ||||| ||||| || |||||||| || | ||||| ||||| |||||||| |||||||||    
T  178421 taaagttaaattattgtcgtataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaa 178345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 11851 - 11814
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttt 285  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  11851 taaagttaaattgttttcgtataagctataagttgttt 11814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 17275 - 17312
Alignment:
Q  273 ctataagttgttttcataacctatcttggagaatttat 310  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  17275 ctataagttgttttcataagctatcttggagaacttat 17312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 27550 - 27603
Alignment:
Q  248 taaagttaaattgtttttgtatatgctataagttgttttcataacctatcttgg 301  Q
    |||||| ||||||||||  ||||  ||||||||||||||||||| |||||||||    
T  27550 taaagtcaaattgttttcatataaactataagttgttttcataaactatcttgg 27603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University