View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7044_low_8 (Length: 240)

Name: NF7044_low_8
Description: NF7044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7044_low_8
NF7044_low_8
[»] chr3 (27 HSPs)
chr3 (1-224)||(54229635-54229859)
chr3 (126-212)||(35345773-35345859)
chr3 (129-213)||(50716461-50716545)
chr3 (129-213)||(50796302-50796386)
chr3 (129-213)||(46622662-46622746)
chr3 (129-213)||(28873214-28873298)
chr3 (131-215)||(40062585-40062669)
chr3 (129-199)||(30721678-30721747)
chr3 (145-215)||(47979887-47979957)
chr3 (129-215)||(51816420-51816506)
chr3 (129-213)||(3902673-3902757)
chr3 (129-213)||(3938390-3938474)
chr3 (129-213)||(33439389-33439473)
chr3 (129-213)||(35142282-35142365)
chr3 (134-213)||(51493007-51493087)
chr3 (129-213)||(52777439-52777523)
chr3 (129-212)||(51258613-51258696)
chr3 (131-217)||(40062241-40062327)
chr3 (133-213)||(14828789-14828870)
chr3 (132-169)||(50384345-50384382)
chr3 (129-213)||(3351933-3352017)
chr3 (132-172)||(4394228-4394268)
chr3 (135-213)||(43472842-43472920)
chr3 (129-171)||(47123276-47123318)
chr3 (129-171)||(47130642-47130684)
chr3 (129-195)||(47739800-47739866)
chr3 (129-213)||(34821210-34821294)
[»] chr4 (30 HSPs)
chr4 (126-215)||(47456814-47456903)
chr4 (126-215)||(48095731-48095820)
chr4 (129-209)||(25752310-25752390)
chr4 (129-213)||(54631359-54631443)
chr4 (129-215)||(34973078-34973164)
chr4 (129-212)||(19835737-19835820)
chr4 (129-215)||(41412965-41413051)
chr4 (129-213)||(6003540-6003624)
chr4 (129-213)||(25491262-25491346)
chr4 (129-213)||(32442026-32442110)
chr4 (129-213)||(52089401-52089485)
chr4 (129-212)||(8106611-8106694)
chr4 (129-172)||(46440139-46440182)
chr4 (143-213)||(53893906-53893976)
chr4 (140-214)||(55138026-55138100)
chr4 (132-213)||(41322962-41323043)
chr4 (126-170)||(346035-346079)
chr4 (129-213)||(6228680-6228764)
chr4 (129-213)||(17933004-17933088)
chr4 (132-172)||(18051059-18051099)
chr4 (129-213)||(25538845-25538929)
chr4 (129-213)||(40703880-40703964)
chr4 (132-215)||(51515769-51515853)
chr4 (126-213)||(49001424-49001511)
chr4 (129-212)||(49397229-49397311)
chr4 (126-212)||(5803297-5803382)
chr4 (129-215)||(38536385-38536471)
chr4 (145-213)||(2505914-2505982)
chr4 (129-213)||(7931872-7931956)
chr4 (129-213)||(48318931-48319015)
[»] chr5 (35 HSPs)
chr5 (125-215)||(6800790-6800880)
chr5 (126-215)||(33901127-33901216)
chr5 (128-215)||(26622280-26622365)
chr5 (129-213)||(37183648-37183732)
chr5 (129-213)||(39524946-39525030)
chr5 (131-213)||(27158254-27158336)
chr5 (129-209)||(14112039-14112119)
chr5 (129-213)||(15957919-15958003)
chr5 (132-215)||(11186046-11186128)
chr5 (129-211)||(12464986-12465068)
chr5 (129-213)||(31221206-31221290)
chr5 (129-213)||(38871841-38871925)
chr5 (129-195)||(38692650-38692716)
chr5 (129-213)||(26093626-26093710)
chr5 (129-212)||(13908719-13908802)
chr5 (129-212)||(26898670-26898753)
chr5 (129-212)||(31928992-31929075)
chr5 (129-212)||(38372472-38372555)
chr5 (129-171)||(26095304-26095346)
chr5 (126-188)||(31561639-31561701)
chr5 (129-213)||(7884363-7884448)
chr5 (129-213)||(4064586-4064670)
chr5 (135-195)||(20891801-20891861)
chr5 (132-200)||(26190192-26190260)
chr5 (129-213)||(28083245-28083329)
chr5 (129-213)||(33487781-33487865)
chr5 (129-212)||(27212875-27212958)
chr5 (129-171)||(6156943-6156985)
chr5 (126-212)||(18514973-18515059)
chr5 (132-206)||(23269514-23269588)
chr5 (129-171)||(40613542-40613584)
chr5 (132-213)||(15799395-15799476)
chr5 (132-189)||(21070559-21070616)
chr5 (131-215)||(3435423-3435507)
chr5 (129-213)||(29862783-29862867)
[»] chr8 (21 HSPs)
chr8 (129-213)||(27927808-27927892)
chr8 (129-213)||(31519759-31519843)
chr8 (134-212)||(44106432-44106510)
chr8 (129-213)||(11698183-11698267)
chr8 (131-213)||(36980777-36980859)
chr8 (132-213)||(3094893-3094974)
chr8 (129-170)||(34853579-34853620)
chr8 (142-223)||(40392734-40392815)
chr8 (128-217)||(41876701-41876789)
chr8 (129-213)||(9073712-9073796)
chr8 (129-213)||(28916983-28917067)
chr8 (129-209)||(40328109-40328189)
chr8 (128-215)||(1374146-1374233)
chr8 (135-213)||(21004592-21004670)
chr8 (129-171)||(36165704-36165746)
chr8 (126-171)||(10840622-10840666)
chr8 (129-209)||(8885320-8885400)
chr8 (145-224)||(32504209-32504287)
chr8 (132-213)||(42280761-42280842)
chr8 (129-213)||(14163924-14164008)
chr8 (131-211)||(34645587-34645667)
[»] chr1 (24 HSPs)
chr1 (129-213)||(52744710-52744794)
chr1 (131-215)||(25563283-25563367)
chr1 (132-211)||(42929094-42929173)
chr1 (129-215)||(3561202-3561288)
chr1 (129-213)||(23442946-23443030)
chr1 (129-213)||(40907801-40907885)
chr1 (129-213)||(45567757-45567841)
chr1 (129-200)||(34006482-34006553)
chr1 (129-213)||(18583411-18583495)
chr1 (129-213)||(33611277-33611361)
chr1 (129-213)||(41584532-41584616)
chr1 (129-169)||(44572967-44573007)
chr1 (129-213)||(49677691-49677775)
chr1 (129-212)||(26723355-26723438)
chr1 (134-213)||(38885421-38885500)
chr1 (129-215)||(6223618-6223704)
chr1 (129-215)||(7011416-7011502)
chr1 (129-210)||(28866497-28866578)
chr1 (129-171)||(42546218-42546260)
chr1 (129-213)||(17000587-17000671)
chr1 (129-213)||(27795038-27795122)
chr1 (129-213)||(45046717-45046801)
chr1 (129-213)||(49786476-49786560)
chr1 (129-169)||(24472694-24472734)
[»] scaffold0010 (1 HSPs)
scaffold0010 (129-215)||(140691-140777)
[»] chr2 (23 HSPs)
chr2 (130-215)||(35251136-35251221)
chr2 (126-215)||(26228272-26228361)
chr2 (131-215)||(45293846-45293930)
chr2 (129-213)||(15994975-15995059)
chr2 (129-213)||(32187731-32187815)
chr2 (132-215)||(42478949-42479032)
chr2 (129-194)||(27670723-27670788)
chr2 (129-213)||(34517309-34517393)
chr2 (129-213)||(41510291-41510375)
chr2 (131-213)||(19109879-19109961)
chr2 (129-213)||(5507627-5507711)
chr2 (129-200)||(38308694-38308765)
chr2 (145-215)||(13704690-13704760)
chr2 (129-213)||(33452305-33452389)
chr2 (129-213)||(30763857-30763941)
chr2 (129-209)||(38065439-38065519)
chr2 (129-213)||(39447370-39447454)
chr2 (129-213)||(41203048-41203132)
chr2 (129-213)||(42894585-42894669)
chr2 (131-189)||(33440374-33440432)
chr2 (129-171)||(41854766-41854808)
chr2 (129-213)||(16750291-16750375)
chr2 (129-213)||(25217636-25217720)
[»] chr7 (26 HSPs)
chr7 (131-215)||(37398760-37398844)
chr7 (129-213)||(36408579-36408663)
chr7 (129-211)||(42925507-42925589)
chr7 (129-212)||(33573910-33573993)
chr7 (129-213)||(33151411-33151494)
chr7 (129-213)||(36468404-36468488)
chr7 (129-213)||(37518130-37518214)
chr7 (129-195)||(19225465-19225531)
chr7 (129-195)||(36629429-36629495)
chr7 (145-215)||(48776092-48776162)
chr7 (129-213)||(7115137-7115221)
chr7 (129-213)||(31643249-31643332)
chr7 (129-171)||(24690200-24690242)
chr7 (135-213)||(36946165-36946243)
chr7 (126-215)||(39581945-39582034)
chr7 (145-209)||(1518919-1518983)
chr7 (129-213)||(19818588-19818672)
chr7 (128-195)||(47239555-47239622)
chr7 (135-213)||(3936316-3936394)
chr7 (143-213)||(9152004-9152074)
chr7 (132-213)||(3304628-3304709)
chr7 (131-215)||(6467009-6467093)
chr7 (129-213)||(8155107-8155191)
chr7 (129-213)||(26555024-26555108)
chr7 (129-213)||(42864969-42865053)
chr7 (129-213)||(43737290-43737374)
[»] chr6 (17 HSPs)
chr6 (140-215)||(29289503-29289578)
chr6 (129-215)||(14037832-14037918)
chr6 (129-213)||(2813091-2813175)
chr6 (129-213)||(3717149-3717233)
chr6 (128-224)||(16450411-16450507)
chr6 (129-213)||(21514898-21514982)
chr6 (126-213)||(13800891-13800978)
chr6 (129-213)||(5699774-5699858)
chr6 (131-213)||(34528648-34528730)
chr6 (129-213)||(4508169-4508253)
chr6 (129-213)||(23407005-23407089)
chr6 (129-213)||(29519487-29519571)
chr6 (144-215)||(6704009-6704079)
chr6 (129-172)||(2539700-2539743)
chr6 (129-200)||(7412971-7413042)
chr6 (129-212)||(17264619-17264702)
chr6 (149-189)||(4893379-4893419)
[»] scaffold0027 (1 HSPs)
scaffold0027 (129-213)||(141831-141915)
[»] scaffold0508 (1 HSPs)
scaffold0508 (129-213)||(3261-3346)
[»] scaffold0564 (1 HSPs)
scaffold0564 (132-214)||(4578-4660)
[»] scaffold0091 (1 HSPs)
scaffold0091 (160-214)||(1961-2015)
[»] scaffold0006 (1 HSPs)
scaffold0006 (145-215)||(59853-59923)


Alignment Details
Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 54229635 - 54229859
Alignment:
Q  1 caggtttcaaggacacatcgtgctagaa-cactcttctgttaatgctcttttattgagtaaaaacaacgtgggtccgaaagcattaagaagagtagtccg 99  Q
    |||||||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54229635 caggtttcaaggacacatcgtgttagaaacactctttttttaatgctcttttattgagtaaaaacaacgtgggtccgaaagcattaaaaagagtagtccg 54229734  T
Q  100 aaaaataggtctttgannnnnnnnncttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataac 199  Q
    ||||||||||||||||          ||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  54229735 aaaaataggtctttgattttttttttttcttcttattttttggggaagtttcagagcaatctgatcaagtagcaagaaaaccgaatttttgactaataac 54229834  T
Q  200 aactaacaatgacctagatcataat 224  Q
    |||||||||||||||||| ||||||    
T  54229835 aactaacaatgacctagaacataat 54229859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 35345773 - 35345859
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||    ||||||| ||||||||||||| ||||||||||||||||    
T  35345773 ttcttctgattttctggggaagtttcggagcaatccgatcaattaacccgaaaacccaatttttgactaagaacaactaacaatgac 35345859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 50716545 - 50716461
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   |||||||  |||||||||||| ||||| |||||||||||    
T  50716545 ttctgattttctggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacc 50716461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 50796302 - 50796386
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   |||||||  |||||||||||| ||||| |||||||||||    
T  50796302 ttctgattttctggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacc 50796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 46622662 - 46622746
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||||||||||| |||||||||||  ||||| |  |||||||||||| ||||| |||||||||||    
T  46622662 ttctgattttctgggaaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaagtaacaatgacc 46622746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 28873298 - 28873214
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||   |||||||  |||||||||||| ||||| ||||| |||||    
T  28873298 ttctaattttctggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacagtgacc 28873214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 40062669 - 40062585
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||| | ||||| |||||| |||||||||||||||||   |||||||  |||||||||||| ||||||||| |||||||||    
T  40062669 ctgattttctagggaaatttcggtgcaatctgatcaagtagcccgaaaaccagatttttgactaagaacaactaataatgaccta 40062585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 30721678 - 30721747
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataac 199  Q
    |||||||||| |||| |||||||||||||||| ||||||||||   ||||||| |||||||||||||||||    
T  30721678 ttctgattttctggg-aagtttcggagcaatccgatcaagtagctcgaaaacccaatttttgactaataac 30721747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 47979887 - 47979957
Alignment:
Q  145 aagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||||||||||||||||||||   | |||  || ||||||| |||||||||||||||||||||||    
T  47979887 aagtttcggagcaatctgatcaagtagcccggaaattgattttttgattaataacaactaacaatgaccta 47979957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 51816506 - 51816420
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||| ||||| ||||||| |||||||||||||||||||||||   |||||||   ||||| |||||  |||||||||||||||||||    
T  51816506 ttcttattttttggggaaatttcggagcaatctgatcaagtaaccagaaaactatattttcgactaggaacaactaacaatgaccta 51816420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 3902673 - 3902757
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| ||||||| |||||||| ||||||||| |  |||||||  |||||||||||| ||||  |||||||||||    
T  3902673 ttctgattttctgggcaagtttccgagcaatccgatcaagtaatctgaaaacccgatttttgactaagaacatgtaacaatgacc 3902757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 3938474 - 3938390
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||||||| |||||||||    |||||||  |||||||||||| ||||  |||||||||||    
T  3938474 ttctgattttttggggaagtttcagagcaatccgatcaagtaacccgaaaaccagatttttgactaagaacaggtaacaatgacc 3938390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 33439473 - 33439389
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||||||||||| |||||||||||  ||||| |  |||||| ||||| || || |||||||||||    
T  33439473 ttctgattttctgggcaagtttcggagcaatccgatcaagtagtccgaaaatctgatttttaactaagaaaaagtaacaatgacc 33439389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 35142365 - 35142282
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||||||||||| ||||||||||   ||||||| | ||||||||||| ||||  |||||||||||    
T  35142365 ttctgattttctggg-aagtttcggagcaatccgatcaagtagcccgaaaacccagtttttgactaagaacagataacaatgacc 35142282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 51493087 - 51493007
Alignment:
Q  134 attttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaa-tttttgactaataacaactaacaatgacc 213  Q
    ||||| ||||||||||||||||||||||||||||||||    |||||| || ||||| ||||| |||| ||||||||||||    
T  51493087 attttctggggaagtttcggagcaatctgatcaagtaggccaaaaacccaatttttttactaagaacagctaacaatgacc 51493007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 52777523 - 52777439
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||||||| ||||||||||   |||||||  |||||||||||| ||||  || ||||||||    
T  52777523 ttctgattttttggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtagcaatgacc 52777439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 51258696 - 51258613
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| |||| |||||||||||||||| |||||||| ||  ||||||   |||||||||||| ||||  ||||||||||    
T  51258696 ttctgattttctgggaaagtttcggagcaatccgatcaagttgtccgaaaactcgatttttgactaagaacatgtaacaatgac 51258613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 40062241 - 40062327
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacctaga 217  Q
    |||||||| | ||||| |||||| ||||||||||||||||    ||||| || |||||||| ||| ||||||||| |||||||||||    
T  40062241 ctgattttctagggaaatttcggtgcaatctgatcaagtaacctgaaaatcggatttttgattaagaacaactaataatgacctaga 40062327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 14828789 - 14828870
Alignment:
Q  133 gattttatggggaagtttcggagcaatctgatcaagtagtaagaaaa-ccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||||||| ||||||||||||||||  |||||||| |  ||||| | || ||||||||||| |||||||||||| ||||    
T  14828789 gattttatgggaaagtttcggagcaatccaatcaagtaatccgaaaatcagattttttgactaagaacaactaacaaggacc 14828870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 50384345 - 50384382
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagt 169  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  50384345 tgattttttggggaagtttcggagcaatctgatcaagt 50384382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 3351933 - 3352017
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| | ||||||||||||||||||| ||||||||||   |||||||  |||||| ||||| |||   |||||||||||    
T  3351933 ttctgattttctagggaagtttcggagcaatccgatcaagtagcctgaaaaccctattttttactaagaaccggtaacaatgacc 3352017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 4394268 - 4394228
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagt 172  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  4394268 tgattttctgggaaagtttcggagcaatctgatcaagtagt 4394228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 43472842 - 43472920
Alignment:
Q  135 ttttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| |||||||||||| ||| |||| ||||||||||   |||||||  |||||||||||| ||||  |||||||||||    
T  43472842 ttttttggggaagtttcagagtaatccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaatgacc 43472920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 47123318 - 47123276
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||||||||| |||| |||||||||||||||| ||||||||||    
T  47123318 ttctgattttctgggcaagtttcggagcaatccgatcaagtag 47123276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 47130684 - 47130642
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||||||||| |||| |||||||||||||||| ||||||||||    
T  47130684 ttctgattttctgggcaagtttcggagcaatccgatcaagtag 47130642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 47739800 - 47739866
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaa 195  Q
    |||| ||||| ||||||||||| ||||||||| ||||||||||   ||||||| ||||||| |||||    
T  47739800 ttctaattttctggggaagttttggagcaatccgatcaagtagcccgaaaacccaatttttaactaa 47739866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 34821210 - 34821294
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||| ||| ||||||||||   |||||||   ||||| ||||| ||||  |||||||||||    
T  34821210 ttctgattttctggggaagtttcagagcgatccgatcaagtagcctgaaaacccgctttttaactaagaacaggtaacaatgacc 34821294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 47456903 - 47456814
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||||| || | ||||||||||||||    
T  47456903 ttcttctgattttctggggaagtttcggagcaatctgatcaagtagcccgaaaaccgaatttttgactaagaatatctaacaatgaccta 47456814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 48095731 - 48095820
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||| |||||||||||||||||||| |||||| |||| ||||||   |||||||  |||||||||||| || ||||||||||||||||    
T  48095731 ttcttcagattttatggggaagtttcgaagcaatatgataaagtagcccgaaaaccagatttttgactaaaaataactaacaatgaccta 48095820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 25752310 - 25752390
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaat 209  Q
    |||||||||| ||||||||||||||||||||||||||||||||   |||||||  |||||||||||| ||||  |||||||    
T  25752310 ttctgattttctggggaagtttcggagcaatctgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaat 25752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 54631359 - 54631443
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||  |||||||  |||||||||||| ||||  |||||||||||    
T  54631359 ttctgattttctggggaagttttggagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacc 54631443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 34973164 - 34973078
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||| ||||||| |||||||||| |||||||| |||||||||||  |||||||  |||||||||||| ||||  |||||||||||||    
T  34973164 ttctaattttatagggaagtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacagataacaatgaccta 34973078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 19835820 - 19835737
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| |||| |||||||||||||||| |||||||||||  |||||||  | |||||||||| ||||  ||||||||||    
T  19835820 ttctgattttctgggaaagtttcggagcaatccgatcaagtagtccgaaaacccgacttttgactaaaaacaggtaacaatgac 19835737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 41412965 - 41413051
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||| |||||||||||| || ||||||||||||||||   |||||||  |||||||| ||| ||||  |||||||||||||    
T  41412965 ttctgattttttggggaagtttcagaacaatctgatcaagtagcccgaaaaccagatttttgattaagaacatgtaacaatgaccta 41413051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 6003540 - 6003624
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| ||||||| ||||||||  |||||||||   |||||||  |||||||||||| ||||| |||||||||||    
T  6003540 ttctgattttttgggaaagtttcagagcaatccaatcaagtagcccgaaaacctgatttttgactaagaacaagtaacaatgacc 6003624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 25491262 - 25491346
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||| ||| ||||||||| |||||||||||   ||||||  |||||||||||| ||||  |||||||||||    
T  25491262 ttctgattttctggggaaattttggagcaatccgatcaagtagtccaaaaacccgatttttgactaagaacatgtaacaatgacc 25491346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 32442110 - 32442026
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||||||| ||||||||||   ||||||   |||||||||||| ||||  |||||||||||    
T  32442110 ttctgattttctggggaagtttcagagcaatccgatcaagtagcccgaaaactcgatttttgactaagaacaggtaacaatgacc 32442026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 52089485 - 52089401
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||| | ||||||| |||||||||||   ||||||  |||||||||||| ||||  |||||||||||    
T  52089485 ttctgattttctggggaagttttgaagcaatccgatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaatgacc 52089401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 8106694 - 8106611
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| |||||||||||||||| |||||||||||||||    ||||||  |||||||| ||| ||||  ||||||||||    
T  8106694 ttctgattttttggggaagtttcggagtaatctgatcaagtagcccaaaaacctgatttttgaataagaacaggtaacaatgac 8106611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 46440139 - 46440182
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagt 172  Q
    |||||||||| ||||||||||||||||||||| |||||||||||    
T  46440139 ttctgattttctggggaagtttcggagcaatccgatcaagtagt 46440182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 53893906 - 53893976
Alignment:
Q  143 ggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||||| |||||||| |||||||||||  |||||||  |||||||||||| ||||  |||||||||||    
T  53893906 ggaagtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaggtaacaatgacc 53893976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 55138026 - 55138100
Alignment:
Q  140 tggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacct 214  Q
    |||| |||||||||| |||| ||||||| ||| | ||||||||||||||||||| | |||||| |||||| ||||    
T  55138026 tgggaaagtttcggatcaatatgatcaaatagcacgaaaaccgaatttttgactgagaacaacaaacaataacct 55138100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 41322962 - 41323043
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||| ||||||| ||||||||||||| |||||||||    ||||||  ||||||| ||||| ||||| |||||||||||    
T  41322962 tgattttctggggaactttcggagcaatccgatcaagtatgccgaaaactcaatttttaactaagaacaattaacaatgacc 41323043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 346035 - 346079
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagta 170  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||    
T  346035 ttcttctgattatatgggaaagttttggagcaatctgatcaagta 346079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 6228680 - 6228764
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| | |||||||||  |||||||| |||||| |||   ||||||| ||||||||||||| ||||  |||||||||||    
T  6228680 ttctgatttttttgggaagttttagagcaatccgatcaaatagcccgaaaacccaatttttgactaagaacaggtaacaatgacc 6228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 17933004 - 17933088
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||| ||||||||||||||||| |||||||| ||  ||||| |  |||||| ||||| ||||  |||||||||||    
T  17933004 ttctgattttctggagaagtttcggagcaatccgatcaagtggtctgaaaatctgattttttactaagaacaggtaacaatgacc 17933088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 18051059 - 18051099
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagt 172  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  18051059 tgattttctgggaaagtttcggagcaatctgatcaagtagt 18051099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 25538845 - 25538929
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||| ||||||||| ||||  |||||||||   ||||||| ||||||||||||| || |  |||||||||||    
T  25538845 ttctgattttctggggatgtttcggagaaatccaatcaagtagcctgaaaaccaaatttttgactaagaagaggtaacaatgacc 25538929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 40703964 - 40703880
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||  ||||||| |||||||||||   ||||||  |||||||||||| || |  |||||||||||    
T  40703964 ttctgattttctggggaagtttcttagcaatccgatcaagtagtccaaaaacccgatttttgactaagaaaagataacaatgacc 40703880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 51515853 - 51515769
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccga-atttttgactaataacaactaacaatgaccta 215  Q
    ||||||| |||| ||||||||||||||| |||||||||| ||| |||| | | ||||| ||||   |||||||||||||||||||    
T  51515853 tgattttctgggaaagtttcggagcaatatgatcaagtaataaaaaaaactagattttcgactggaaacaactaacaatgaccta 51515769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 49001424 - 49001511
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||||||||| ||| ||| ||||||||||||| ||||||||||   ||||| |  |||||||||||  ||||  |||||||||||    
T  49001424 ttcttctgattttctggagaattttcggagcaatccgatcaagtagcccgaaaatcagatttttgactatgaacagttaacaatgacc 49001511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 49397311 - 49397229
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| |||| ||||||| |||||||| ||||||||||   |||||||  |||||||||||| ||||  ||||||||||    
T  49397311 ttctgattttttggg-aagtttcagagcaatccgatcaagtagctcgaaaacccgatttttgactaagaacatgtaacaatgac 49397229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 5803297 - 5803382
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    ||||||||||||| |||| ||||||  ||||||||| |||||||||    |||||  ||||||||||||| |||| |||||||||||    
T  5803297 ttcttctgattttttggg-aagtttttgagcaatctaatcaagtagcccaaaaactaaatttttgactaaaaacagctaacaatgac 5803382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 38536471 - 38536385
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||| |||| |||||| ||| ||||| ||||||||||   ||||||   |||||||||||| ||||  |||||||||||||    
T  38536471 ttctgattttctgggaaagttttggaacaatccgatcaagtagcctgaaaacttgatttttgactaagaacatgtaacaatgaccta 38536385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 2505914 - 2505982
Alignment:
Q  145 aagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||||||||| ||||||||||   |||||||  ||| |||||||| ||||  |||||||||||    
T  2505914 aagtttcggagcaatccgatcaagtagcccgaaaacccgattattgactaagaacatgtaacaatgacc 2505982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 7931956 - 7931872
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||| ||||||| || ||||||||  ||||||   ||||||||| || ||||  |||||||||||    
T  7931956 ttctgattttctgggaaagtttcgaagcaatccgaccaagtagtccgaaaactcgatttttgaccaaaaacatgtaacaatgacc 7931872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 48318931 - 48319015
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||| ||||| ||||||| |||||||||||  ||||| |  |||||| ||||| || |  |||||||||||    
T  48318931 ttctgattttctggggaaatttcgaagcaatccgatcaagtagtccgaaaatccgattttttactaagaatagataacaatgacc 48319015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 6800790 - 6800880
Alignment:
Q  125 cttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||  |||||||| |||||||||||| |||| ||||||||||||||    
T  6800790 cttcttctgattttttgggcaagtttcggagcaatatgatcaagtagttcgaaaaccggatttttgactaagaacatctaacaatgaccta 6800880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 33901216 - 33901127
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||||||   |||||||||||||||||||||||||| ||||  ||||| | ||||||||||||| |||||||||||||||||||    
T  33901216 ttcttctgattttcgagggaagtttcggagcaatctgatcaaatagtctgaaaatcaaatttttgactaaaaacaactaacaatgaccta 33901127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 26622365 - 26622280
Alignment:
Q  128 cttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||||||| || ||||||||||||||||||||||||||||||  |||||||| |||||||||||  ||||||||||||| |||||    
T  26622365 cttctgattttctgaggaagtttcggagcaatctgatcaagtagtccgaaaaccggatttttgacta--aacaactaacaataaccta 26622280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 37183648 - 37183732
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||||||||||||| |||||||||||||| |||||||||||  |||||||  |||||||||||| ||||| |||||||||||    
T  37183648 ttctgattttatggggatgtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgacc 37183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 39525030 - 39524946
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||| |||||||||||||||||||||||||  ||||||| |||||| |||||| ||||| |||||||||||    
T  39525030 ttctgattttctggggaaatttcggagcaatctgatcaagtagttcgaaaacccaattttggactaagaacaagtaacaatgacc 39524946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 27158336 - 27158254
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||| |||| |||||||||||||||||||||||||||   ||||||||||||||| | ||||||||||||| |||||||    
T  27158336 ctgattttctgggaaagtttcggagcaatctgatcaagtagcctgaaaaccgaattttttattaataacaactaataatgacc 27158254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 14112119 - 14112039
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaat 209  Q
    |||||||||| |||||||||||||||||||||  ||||||||||  |||||||  |||||||||||| ||||| |||||||    
T  14112119 ttctgattttctggggaagtttcggagcaatcctatcaagtagtccgaaaacccgatttttgactaagaacaagtaacaat 14112039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 15958003 - 15957919
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||||||  |||||||||||| ||||  ||| |||||||    
T  15958003 ttctgattttctggggaagtttcggagcaatccgatcaagtagtccgaaaacctgatttttgactaagaacaggtaataatgacc 15957919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 11186046 - 11186128
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||| ||| |||||||||||||||||| ||||||||||  ||||||||||||||| ||||| |||| |||||||| |||||    
T  11186046 tgattttctggagaagtttcggagcaatctaatcaagtagt-tgaaaaccgaattttttactaagaacatctaacaattaccta 11186128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 12464986 - 12465068
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatga 211  Q
    |||||||||| ||||| |||||| |||||||| |||||||||||  |||||||  |||||||||||| ||||| |||||||||    
T  12464986 ttctgattttttggggtagtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatga 12465068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 31221206 - 31221290
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   ||||||| | ||||| ||||| ||||  |||||||||||    
T  31221206 ttctgattttctggggaagtttcggagcaatccgatcaagtagcccgaaaacccagtttttaactaagaacatgtaacaatgacc 31221290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 38871925 - 38871841
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||||||||||| ||| |||||||  |||||||  |||||||||||| ||||  |||||||||||    
T  38871925 ttctgattttctgggaaagtttcggagcaatccgattaagtagtctgaaaacccgatttttgactaagaacaggtaacaatgacc 38871841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 38692650 - 38692716
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaa 195  Q
    |||||||||| ||||||||||||||||||||| || ||||||||  |||||||  ||||||||||||    
T  38692650 ttctgattttttggggaagtttcggagcaatccgaccaagtagtccgaaaacccgatttttgactaa 38692716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 26093710 - 26093626
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| || ||||||||||  |||||||| |||| |||   ||||||  ||||||||||||| |||||||||||||||||    
T  26093710 ttctgattttgtgaggaagtttcgaggcaatctgttcaaatagcctgaaaactcaatttttgactaagaacaactaacaatgacc 26093626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 13908802 - 13908719
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||| ||||| ||||||  ||||||||||||| |||||||||||  |||||||  ||||||||| || |||| |||||||||||    
T  13908802 ttctaattttttggggatatttcggagcaatccgatcaagtagtctgaaaacctgatttttgacaaagaacagctaacaatgac 13908719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 26898670 - 26898753
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| |||| |||||||||||||||| ||||||||||   ||||||   |||||||||||| ||||  ||||||||||    
T  26898670 ttctgattttttgggcaagtttcggagcaatccgatcaagtagcccgaaaactcgatttttgactaagaacatataacaatgac 26898753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 31928992 - 31929075
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   |||||||   ||||| ||||| ||||  ||||||||||    
T  31928992 ttctgattttctggggaagtttcggagcaatccgatcaagtagcccgaaaacctggtttttaactaagaacaggtaacaatgac 31929075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 38372555 - 38372472
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    ||||||| || ||||||||||||||||| ||| ||||||||||   ||||||| ||||||| ||||| ||||  ||||||||||    
T  38372555 ttctgatcttctggggaagtttcggagcgatccgatcaagtagcccgaaaacccaatttttaactaagaacatgtaacaatgac 38372472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 26095346 - 26095304
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||||||||| |||||||||||||||||||||||| |||||||    
T  26095346 ttctgattttctggggaagtttcggagcaatctgaacaagtag 26095304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 31561701 - 31561639
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttt 188  Q
    ||||| ||||||| |||| ||||||||||| ||||||||||||||| | ||||||| ||||||    
T  31561701 ttcttttgattttctgggaaagtttcggagtaatctgatcaagtagcatgaaaaccaaatttt 31561639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 7884448 - 7884363
Alignment:
Q  129 ttctgattttat-ggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||||| |||||||||||||||||||| ||||||||||   ||||| |  ||| |||||||| ||||  |||||||||||    
T  7884448 ttctgattttataggggaagtttcggagcaatccgatcaagtagcccgaaaatccgattcttgactaagaacatgtaacaatgacc 7884363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 4064586 - 4064670
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||||||||||||  |||||||||   |||||    |||||||||||| ||||  |||||||||||    
T  4064586 ttctgattttctggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgacc 4064670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 20891861 - 20891801
Alignment:
Q  135 ttttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaa 195  Q
    |||| ||||||||||||||||||||| ||||||||||   |||||||  ||||||||||||    
T  20891861 ttttctggggaagtttcggagcaatccgatcaagtagcctgaaaacccgatttttgactaa 20891801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 26190192 - 26190260
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataaca 200  Q
    ||||||| |||||||||||| |||||||| |||| ||||||  |||||||  |||||||||||| ||||    
T  26190192 tgattttttggggaagtttcagagcaatccgatctagtagtccgaaaacccgatttttgactaagaaca 26190260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 28083245 - 28083329
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||| ||||||||||| |||||||||||  ||||||   ||||||  |||| ||||  |||||||||||    
T  28083245 ttctgattttctggggaagtatcggagcaatccgatcaagtagtccgaaaactcgattttttcctaagaacaggtaacaatgacc 28083329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 33487865 - 33487781
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||||||||||   ||||||||||   ||||||   |||||||||||| ||||  |||||||||||    
T  33487865 ttctgattttctggggaagtttcggagcaaatcgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaatgacc 33487781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 27212958 - 27212875
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| | ||||||| |||||||||||  ||||| ||||  |||||||  |||||||||||| ||||  ||||||||||    
T  27212958 ttctgattttctagggaagtatcggagcaatccaatcaaatagtccgaaaacccgatttttgactaagaacaggtaacaatgac 27212875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 6156985 - 6156943
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||||||||| |||| |||||||||||||||| ||||||||||    
T  6156985 ttctgattttctgggaaagtttcggagcaatccgatcaagtag 6156943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 18515059 - 18514973
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    ||||| ||||||| |||| |  |||||||||||| |||||||||||   |||||||| |||||||||| | |||  |||||||||||    
T  18515059 ttcttttgattttctgggaagttttcggagcaatttgatcaagtagctcgaaaaccggatttttgactgaaaaccgctaacaatgac 18514973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 23269588 - 23269514
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaac 206  Q
    ||||||| ||||||||||||| ||||||| ||||||||||   |||||||  |||||||| ||| |||| |||||    
T  23269588 tgattttctggggaagtttcgaagcaatccgatcaagtagcccgaaaacccgatttttgaataagaacatctaac 23269514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 40613542 - 40613584
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||| ||||| || |||||||||||||||||||||||||||||    
T  40613542 ttcttattttttgaggaagtttcggagcaatctgatcaagtag 40613584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 15799476 - 15799395
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||| |||| |||||||||||||||| | ||||||||   | |||||  |||||||||||| ||||  |||||||||||    
T  15799476 tgattttctgggcaagtttcggagcaatccggtcaagtagcccggaaacccgatttttgactaagaacatgtaacaatgacc 15799395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 21070616 - 21070559
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaattttt 189  Q
    ||||||| ||||||||||||| |||||||  ||||||||| | |||||||| ||||||    
T  21070616 tgattttttggggaagtttcgaagcaatccaatcaagtagcatgaaaaccggattttt 21070559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 3435507 - 3435423
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||| ||||||||||||  |||||||| || |||||||   |||| | ||||||||| | | |||| ||||||||||||||    
T  3435507 ctgattttttggggaagtttcaaagcaatctcataaagtagtccaaaaatcaaatttttgattgaaaacatctaacaatgaccta 3435423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 29862867 - 29862783
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| | |||||||||||||||||||  |||||||||   ||||||   |||||||||||| ||||  ||| |||||||    
T  29862867 ttctgattttctagggaagtttcggagcaatcacatcaagtagcccgaaaacttgatttttgactaagaacaggtaataatgacc 29862783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 27927808 - 27927892
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||| ||||  |||||||||||    
T  27927808 ttctgattttatggggaagtttcggagcaatctgatcaagtagtccgaaaacccaatttttaactaagaacaggtaacaatgacc 27927892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 31519759 - 31519843
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||||||||||||||||||| |||||||| ||||||||||   |||||||  |||||||||||| ||||| |||||||||||    
T  31519759 ttctgattttatggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaatgacc 31519843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 44106510 - 44106432
Alignment:
Q  134 attttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||||||||||| |||||||| |||||||||| | |||||||  |||||||||||| ||||  ||||||||||    
T  44106510 attttatggggaagtttcagagcaatcagatcaagtagcacgaaaacccgatttttgactaagaacaggtaacaatgac 44106432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 11698183 - 11698267
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||||||||| || ||||||||||   |||||||  |||||||||||| ||||  |||||||||||    
T  11698183 ttctgattttctggggaagtttcggagcattccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaatgacc 11698267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 36980859 - 36980777
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||| || |||||||||||||||||| ||||||||||   ||||| || |||||||||||| || | ||||||||||||    
T  36980859 ctgattttctgtggaagtttcggagcaatccgatcaagtagcccgaaaatcggatttttgactaagaatagctaacaatgacc 36980777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 3094974 - 3094893
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||| |||| |||||||||||||||| |||||||||||  ||||||   |||||||||||| ||||  |||||||||||    
T  3094974 tgattttctgggcaagtttcggagcaatccgatcaagtagtccgaaaactcgatttttgactaagaacatgtaacaatgacc 3094893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 34853620 - 34853579
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagta 170  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  34853620 ttctgattttatggggaagtttcggagcaatccgatcaagta 34853579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 40392815 - 40392734
Alignment:
Q  142 gggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacctagatcataa 223  Q
    |||||||||||||| |||| ||||||||||   ||||||   |||||||||||| ||||||||||||||||| | |||||||    
T  40392815 gggaagtttcggagaaatccgatcaagtagcttgaaaacttgatttttgactaagaacaactaacaatgacccaaatcataa 40392734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 41876789 - 41876701
Alignment:
Q  128 cttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacctaga 217  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||   |||||| ||||||| |||||  ||||||||||||||| |||||    
T  41876789 cttctgatttt-tggaaaagtttcggagcaatatgatcaagtagcccgaaaactgaattttcgactagaaacaactaacaatgatctaga 41876701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 9073796 - 9073712
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| || ||||||||||||||||||  ||||||||||   ||||||  |||||||||||| ||||  |||||||||||    
T  9073796 ttctgattttctgaggaagtttcggagcaatccaatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaatgacc 9073712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 28917067 - 28916983
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||   ||| |||| ||||| || || ||||  |||||||||||    
T  28917067 ttctgattttctggggaagtttcggagcaatccgatcaagtagtcgaaaacccgatttttttaccaagaacatgtaacaatgacc 28916983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 40328189 - 40328109
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaat 209  Q
    |||||||||| | ||||||||| ||||||||| |||||||||||  |||||||  |||||||||||| ||||  |||||||    
T  40328189 ttctgattttctagggaagttttggagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaat 40328109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 1374233 - 1374146
Alignment:
Q  128 cttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||| ||||| |||  |||||| |||||||| ||||||||||||  |||| || ||||||||| | | |||||||||||||||||||    
T  1374233 cttctaattttttggaaaagttttggagcaatttgatcaagtagtctgaaatccaaatttttgaatgaaaacaactaacaatgaccta 1374146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 21004670 - 21004592
Alignment:
Q  135 ttttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||| |||||||| |||||||||||||||||||   |||||||  |||||||||||| ||||  |||||||||||    
T  21004670 ttttttggagaagtttcagagcaatctgatcaagtagccggaaaacccgatttttgactaagaacatgtaacaatgacc 21004592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 36165704 - 36165746
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||||||||| ||||||||||||||||||||| ||||||||||    
T  36165704 ttctgattttctggggaagtttcggagcaatccgatcaagtag 36165746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 10840622 - 10840666
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  10840622 ttcttctgattttctggggaagtttcggagcaa-ctgatcaagtag 10840666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 8885320 - 8885400
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaat 209  Q
    |||||||||| |||| | |||||||||||||| |||||||||||  |||||||  |||||| ||||| ||||  |||||||    
T  8885320 ttctgattttctgggaatgtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaat 8885400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 32504209 - 32504287
Alignment:
Q  145 aagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacctagatcataat 224  Q
    ||||||||||||||| |||||||||| |  |||| ||| ||||| |||||  ||||||||||||||||||| | ||||||    
T  32504209 aagtttcggagcaatttgatcaagtattctgaaa-ccggattttcgactaggaacaactaacaatgacctataacataat 32504287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 42280761 - 42280842
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||| ||||||||||||| || |||| |||||||||||   |||| |  |||||||||||| ||||  |||||||||||    
T  42280761 tgattttctggggaagtttcgaagtaatccgatcaagtagtccaaaaatccgatttttgactaagaacaggtaacaatgacc 42280842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 14163924 - 14164008
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||| |||||||||||| | |||||||||    ||||||  | ||||||||||| ||||  |||||||||||    
T  14163924 ttctgattttctggggaggtttcggagcaaaccgatcaagtaccccgaaaacgcagtttttgactaagaacaggtaacaatgacc 14164008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 34645667 - 34645587
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatga 211  Q
    ||||||||  ||| || |||||||||||| |||||||||||   |||||||| || ||||||||| ||||  |||||||||    
T  34645667 ctgatttttggggaaaatttcggagcaatgtgatcaagtagcccgaaaaccggatgtttgactaagaacatgtaacaatga 34645587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 52744710 - 52744794
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||| ||||| |||||||||||    
T  52744710 ttctgattttctggggaagtttcggagcaatccgatcaagtagtccgaaaacccaatttttgactaagaacaagtaacaatgacc 52744794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 25563283 - 25563367
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||| | ||||||||||||||||||| ||||||||||   ||| | || ||||||||||||||||||||||||||||||||    
T  25563283 ctgattttcttgggaagtttcggagcaatccgatcaagtagctcgaatatcggatttttgactaataacaactaacaatgaccta 25563367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 42929173 - 42929094
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatga 211  Q
    |||||||||||| |||||||||||||||||||||||||||   |||||||  |||||||||| | |||||||||||||||    
T  42929173 tgattttatgggaaagtttcggagcaatctgatcaagtagctcgaaaaccagatttttgactgagaacaactaacaatga 42929094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 3561202 - 3561288
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||     || | || |||||||||||| |||||||||||||||||||    
T  3561202 ttctgattttatgggaaagtttcggagcaatctgatcaagtaacccaaagatcggatttttgactaagaacaactaacaatgaccta 3561288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 23443030 - 23442946
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||||||| |||||||||||  |||||||  |||||||||||| ||||  |||||||||||    
T  23443030 ttctgattttttggggaagtttcagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaatgacc 23442946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 40907801 - 40907885
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||||||  |||||| ||||| ||||  |||||||||||    
T  40907801 ttctgattttctggggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaacaacaggtaacaatgacc 40907885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 45567757 - 45567841
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||||||  |||||| ||||| ||||  |||||||||||    
T  45567757 ttctgattttttggggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaatgacc 45567841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 34006553 - 34006482
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataaca 200  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   ||||||| ||||||||||||| ||||    
T  34006553 ttctgattttctggggaagtttcggagcaatccgatcaagtagcccgaaaacctaatttttgactaagaaca 34006482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 18583411 - 18583495
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||||||| ||||||||||   |||||||  |||||||||||| ||||  |||||||||||    
T  18583411 ttctgattttttggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacc 18583495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 33611277 - 33611361
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||||||| ||||||||||   |||||||  |||||||||||| ||||  |||||||||||    
T  33611277 ttctgattttttggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacc 33611361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 41584532 - 41584616
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||||||||||| ||||||||||   |||||||  |||||||||||| ||||  |||||||||||    
T  41584532 ttctgattttctgggcaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacc 41584616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 44572967 - 44573007
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagt 169  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44572967 ttctgattttatggggaagtttcggagcaatctgatcaagt 44573007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 49677775 - 49677691
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   |||||||  |||||| ||||| ||||  |||||||||||    
T  49677775 ttctgattttctggggaagtttcggagcaatccgatcaagtaggctgaaaacccgatttttaactaagaacatgtaacaatgacc 49677691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 26723355 - 26723438
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| ||||||||||||||||||||| |||||||||||   ||||||  |||||| ||||| ||||  ||||||||||    
T  26723355 ttctgattttctggggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaagaacagataacaatgac 26723438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 38885500 - 38885421
Alignment:
Q  134 attttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||| |||| |||||||||||||||| ||||||||||   ||||||| ||||||| ||||| ||||| |||||||||||    
T  38885500 attttttgggaaagtttcggagcaatccgatcaagtagcccgaaaacccaatttttaactaagaacaagtaacaatgacc 38885421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 6223618 - 6223704
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||| |||| ||||||| |||||||| ||||||||||   |||||||  |||||||||||| ||||  |||||||||||||    
T  6223618 ttctgattttctgggaaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgaccta 6223704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 7011502 - 7011416
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||| |||||| |||||||||||||| ||||||||||   |||||||  |||||||||||| ||||  | |||||||||||    
T  7011502 ttctgattttctggggatgtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaaaaacaggttacaatgaccta 7011416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 28866497 - 28866578
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaa-accgaatttttgactaataacaactaacaatg 210  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||  |||| |||| |||||||||||| ||||  ||||||||    
T  28866497 ttctaattttttggggaagtttcggagcaatccgatcaagtagtccgaaataccg-atttttgactaagaacaggtaacaatg 28866578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 42546260 - 42546218
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||||||||| ||||||||||||||||||||| ||||||||||    
T  42546260 ttctgattttctggggaagtttcggagcaatccgatcaagtag 42546218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 17000671 - 17000587
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||||||||||||  |||||||||   |||||    |||||||||||| ||||  |||||||||||    
T  17000671 ttctgattttctggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaatgacc 17000587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 27795122 - 27795038
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| || |||||||||||||||||| ||||||||||    ||||||  || ||||||||| ||||  |||||||||||    
T  27795122 ttctgattttctgtggaagtttcggagcaatccgatcaagtagcccaaaaacccgatgtttgactaagaacaggtaacaatgacc 27795038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 45046717 - 45046801
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||||||||||| ||||||||||   |||||||   ||||| ||||| ||||  |||||||||||    
T  45046717 ttctgattttttgggcaagtttcggagcaatccgatcaagtagcccgaaaacccggtttttaactaagaacaggtaacaatgacc 45046801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 49786560 - 49786476
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||||||| ||||||||||   ||||||   |||||||||||| ||||  ||||| |||||    
T  49786560 ttctgattttttggggaagtttcagagcaatccgatcaagtaggccgaaaacttgatttttgactaaaaacatgtaacattgacc 49786476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 24472694 - 24472734
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagt 169  Q
    |||||||||| |||||||||||||||||||||  |||||||    
T  24472694 ttctgattttctggggaagtttcggagcaatccaatcaagt 24472734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 140777 - 140691
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||||||  |||||||||||| ||||| |||||||||||||    
T  140777 ttctgattttctggggaagtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaatgaccta 140691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 35251221 - 35251136
Alignment:
Q  130 tctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||||| |||| |||||||||||||||||||||||||||   |||||||| ||||| |||||| |||||||||||||||||||    
T  35251221 tctgattttctgggaaagtttcggagcaatctgatcaagtagcccgaaaaccggattttcgactaagaacaactaacaatgaccta 35251136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 26228361 - 26228272
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||||||||||||||||||||||  |||||||||||||||   ||||||   |||||||||||| ||||||||||||| |||||    
T  26228361 ttcttctgattttatggggaagtttcggacgaatctgatcaagtagctcgaaaactagatttttgactaagaacaactaacaattaccta 26228272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 45293930 - 45293846
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||||||||| ||||||| ||||||| |||||||||||   |||||||| |||||||||||| |||||||| ||||||||||    
T  45293930 ctgattttatgggaaagtttcagagcaatatgatcaagtagcccgaaaaccggatttttgactaagaacaactagcaatgaccta 45293846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 15994975 - 15995059
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||||||||||||||||||||||||| |||||| ||||  ||||| | ||||||| ||||| ||||  |||||||||||    
T  15994975 ttctgattttatggggaagtttcggagcaatccgatcaaatagtctgaaaatccaattttttactaagaacatgtaacaatgacc 15995059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 32187731 - 32187815
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||||||  ||||||||| || ||||  |||||||||||    
T  32187731 ttctgattttctggggaagtttcggagcaatccgatcaagtagtccgaaaacccgatttttgaccaagaacaggtaacaatgacc 32187815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 42479032 - 42478949
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||| |||||||||||| |||||||||||||||||||   |||||| |||||||||||| | |||  ||||||||||||||    
T  42479032 tgattttttggggaagtttcagagcaatctgatcaagtagcccgaaaactgaatttttgactgagaacggctaacaatgaccta 42478949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 27670788 - 27670723
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgacta 194  Q
    ||||||||||||||| |||||||||||||||| |||||||||||  |||||||  |||||||||||    
T  27670788 ttctgattttatgggaaagtttcggagcaatccgatcaagtagtccgaaaacccgatttttgacta 27670723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 34517393 - 34517309
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||| ||| |||| |||||||||||||||| ||||||||| |  ||||||| ||||||||||||| ||||  |||||||||||    
T  34517393 ttctgactttctgggtaagtttcggagcaatccgatcaagtattccgaaaacccaatttttgactaagaacaggtaacaatgacc 34517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 41510291 - 41510375
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| | ||||||||||||||||||| ||||||||||   ||||||| | ||||| ||||| ||||| |||||||||||    
T  41510291 ttctgattttctagggaagtttcggagcaatccgatcaagtagcccgaaaacccagtttttaactaagaacaagtaacaatgacc 41510375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 19109879 - 19109961
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||| ||| ||||||||||||||||| |||||||||||   ||||| | |||||||||||| |||| ||||||||||||    
T  19109879 ctgaatttctggtgaagtttcggagcaatccgatcaagtagtccaaaaactggatttttgactaagaacagctaacaatgacc 19109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 5507711 - 5507627
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||| |   |||||||  |||||||||||| ||||  || ||||||||    
T  5507711 ttctgattttctggggaagtttcggagcaatccgatcaagttgcccgaaaacctgatttttgactaagaacaggtagcaatgacc 5507627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 38308694 - 38308765
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataaca 200  Q
    |||||||||| |||||||||||| |||||||||||||||||||   |||| ||  |||||||||||| ||||    
T  38308694 ttctgattttctggggaagtttcagagcaatctgatcaagtagcccgaaatcccgatttttgactaagaaca 38308765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 13704690 - 13704760
Alignment:
Q  145 aagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||| |||||||||||||||||||   ||||| || |||||||||| | ||||||||||||| |||||    
T  13704690 aagtttcagagcaatctgatcaagtagcccgaaaatcggatttttgactgaaaacaactaacaataaccta 13704760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 33452305 - 33452389
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagt-aagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||||||||||| |||||||||||  ||||| ||| |||||||||||| ||||  |||||| ||||    
T  33452305 ttctgattttctgggaaagtttcggagcaatccgatcaagtagtccagaaacccg-atttttgactaagaacagataacaaagacc 33452389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 30763941 - 30763857
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| || |||||||||||||||||| |||||||| |    |||| |  |||||||||||| |||| ||||||||||||    
T  30763941 ttctgattttctgaggaagtttcggagcaatccgatcaagttgcccaaaaatcagatttttgactaagaacagctaacaatgacc 30763857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 38065439 - 38065519
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaat 209  Q
    ||||||||||||||| |||||||||||||||| |||||| |||   ||||| | ||||||| ||||| ||||  |||||||    
T  38065439 ttctgattttatgggaaagtttcggagcaatccgatcaaatagcctgaaaatctaattttttactaagaacaggtaacaat 38065519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 39447454 - 39447370
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| | |||||||||| |||||||| ||||||| |||  ||| |||  |||||||||||| ||||  |||||||||||    
T  39447454 ttctgattttctagggaagtttcagagcaatccgatcaagcagtcggaagacccgatttttgactaagaacatgtaacaatgacc 39447370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 41203048 - 41203132
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||||| ||||||||||||||||||||| |||||||| |   ||||| | ||||||| ||||| ||||  |||||||||||    
T  41203048 ttctaattttctggggaagtttcggagcaatccgatcaagttgcccgaaaatccaatttttaactaagaacaggtaacaatgacc 41203132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 42894669 - 42894585
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||||| |||||||||||||||| |||| |||||||||||  ||||||   ||||||| |||| ||||  |||||||||||    
T  42894669 ttctaattttctggggaagtttcggagtaatccgatcaagtagtccgaaaactcgatttttgcctaagaacatgtaacaatgacc 42894585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 33440374 - 33440432
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaattttt 189  Q
    |||||||| ||||||||||||||||||| ||| |||||||||  || ||||| ||||||    
T  33440374 ctgattttctggggaagtttcggagcaacctggtcaagtagtctgataaccgtattttt 33440432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 41854766 - 41854808
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||||||||| |||||||||||| |||||||| ||||||||||    
T  41854766 ttctgattttctggggaagtttcagagcaatccgatcaagtag 41854808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 16750291 - 16750375
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||| | ||||||||||||||  ||||| |||||||||||  ||||| |  |||||| ||||| ||||  |||||||||||    
T  16750291 ttctgattgtctggggaagtttcggtacaatccgatcaagtagtccgaaaatccgattttttactaagaacagataacaatgacc 16750375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 25217636 - 25217720
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| | | ||||| ||||||||||| ||||||||||   |||||||  |||||| ||||| ||||  |||||||||||    
T  25217636 ttctgattttctagagaagtgtcggagcaatccgatcaagtagcccgaaaacccgattttttactaagaacaggtaacaatgacc 25217720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 37398760 - 37398844
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||| | ||||||||||||||||||||||||||||||    |||||||||||||| ||||| |||||||||||||||||||    
T  37398760 ctgattttctagggaagtttcggagcaatctgatcaagtagcctaaaaaccgaattttttactaagaacaactaacaatgaccta 37398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 36408663 - 36408579
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||  ||||||| ||||||||||||| ||||  |||||||||||    
T  36408663 ttctgattttttggagaagtttcggagcaatccgatcaagtagtccgaaaaccaaatttttgactaagaacacgtaacaatgacc 36408579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 42925507 - 42925589
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatga 211  Q
    |||||||||| |||| |||||||||||||||| ||||||||||   ||||||| ||||||||||||| ||||| |||||||||    
T  42925507 ttctgattttctgggtaagtttcggagcaatccgatcaagtagcccgaaaacccaatttttgactaagaacaagtaacaatga 42925589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 33573910 - 33573993
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| |||||||||||| |||||||| |||||||||||  ||||||| ||||||||| ||| ||||  ||||||||||    
T  33573910 ttctgattttttggggaagtttcagagcaatccgatcaagtagttcgaaaacccaatttttgattaaaaacatgtaacaatgac 33573993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 33151494 - 33151411
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| ||||||||||  |||| ||||||||||| |||||||| ||||||||||||| ||||  |||||||||||    
T  33151494 ttctgattttctggg-aagtttcggaataatccgatcaagtagtcagaaaacccaatttttgactaagaacagataacaatgacc 33151411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 36468404 - 36468488
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   |||||||  |||||| ||||| ||||  |||||||||||    
T  36468404 ttctgattttctggggaagtttcggagcaatccgatcaagtagcccgaaaacccgattttttactaagaacatgtaacaatgacc 36468488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 37518130 - 37518214
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||   |||||| ||||||| ||||| ||||  |||||||||||    
T  37518130 ttctgattttctggggaagtttcggagcaatccgatcaaatagtccaaaaacccaatttttaactaagaacaggtaacaatgacc 37518214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 19225465 - 19225531
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaa 195  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||  |||||||  ||||||||||||    
T  19225465 ttctgattttctggggaagtttcggagcaatccgatcaaatagtccgaaaacctgatttttgactaa 19225531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 36629495 - 36629429
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaa 195  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   |||||||  ||||||||||||    
T  36629495 ttctgattttttggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaa 36629429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 48776092 - 48776162
Alignment:
Q  145 aagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||||||||||||| ||||||   ||||| | ||||||||||||| |||||||| ||||||||||    
T  48776092 aagtttcggagcaatctgattaagtagctcgaaaatcaaatttttgactaagaacaactagcaatgaccta 48776162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 7115137 - 7115221
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| || ||||||||| |||||||  ||||||||||   ||||||   |||||||||||| |||||||||||||||||    
T  7115137 ttctgattttctgaggaagtttcagagcaatacgatcaagtagcccgaaaacacgatttttgactaagaacaactaacaatgacc 7115221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 31643332 - 31643249
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| || ||||||||| |||||||| |||||||||||  |||| ||| |||||||||||| ||||  |||||||||||    
T  31643332 ttctgattttttgcggaagtttcagagcaatccgatcaagtagtccgaaacccg-atttttgactaagaacatgtaacaatgacc 31643249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 24690200 - 24690242
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtag 171  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  24690200 ttctgattttatggagaagtttcggagcaatccgatcaagtag 24690242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 36946165 - 36946243
Alignment:
Q  135 ttttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||||||||||||| ||||||  |||||||||    |||||||  | ||||||||||||||||||||||||||||    
T  36946165 ttttctggggaagtttcgaagcaattcgatcaagtatcccgaaaaccagaattttgactaataacaactaacaatgacc 36946243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 39582034 - 39581945
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||| ||||||||||||| |||   |||||| |||||||||||    ||||||| ||||||||| || || ||||||||||||||||    
T  39582034 ttcttctaattttatggggaattttttaagcaatatgatcaagtagcccaaaaaccggatttttgacgaagaataactaacaatgaccta 39581945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 1518983 - 1518919
Alignment:
Q  145 aagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaat 209  Q
    |||||||||||||||| |||||||||||  |||||||  |||||| ||||| |||| ||||||||    
T  1518983 aagtttcggagcaatccgatcaagtagtccgaaaaccctattttttactaagaacagctaacaat 1518919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 19818672 - 19818588
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| |||||||||||||||| |||||||||||   ||||||  ||||| ||| || ||||  |||||||||||    
T  19818672 ttctgattttctgggaaagtttcggagcaatccgatcaagtagtccaaaaacccgattttcgaccaagaacaggtaacaatgacc 19818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 47239555 - 47239622
Alignment:
Q  128 cttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaa 195  Q
    ||||| ||||| || |||||||||||||||||||||||||||| |  ||||| |  ||||||||||||    
T  47239555 cttctaattttctgtggaagtttcggagcaatctgatcaagtactccgaaaatcagatttttgactaa 47239622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 3936394 - 3936316
Alignment:
Q  135 ttttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||||||||||||||||||||| ||||||| |||  ||||| |  |||||||||||| || |  |||||||||||    
T  3936394 ttttctggggaagtttcggagcaatccgatcaagcagtccgaaaatccgatttttgactaagaataggtaacaatgacc 3936316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 9152074 - 9152004
Alignment:
Q  143 ggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||||||||||| |||||||||||   ||||||  |||||| ||||| ||||  |||||||||||    
T  9152074 ggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaagaacatgtaacaatgacc 9152004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 3304628 - 3304709
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||| | |||||||||| |||||||| ||||||||||   || ||||  |||||||||||| ||||  |||||||||||    
T  3304628 tgatttttttgggaagtttcagagcaatccgatcaagtagcccgagaacccgatttttgactaagaacaggtaacaatgacc 3304709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 6467009 - 6467093
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||| | ||||| |||| || ||||| ||||||||||   ||| ||| ||||||| ||||| |||| ||||||||||||||    
T  6467009 ctgattttctagggaaatttcagaacaatccgatcaagtagccggaataccaaatttttaactaagaacagctaacaatgaccta 6467093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 8155191 - 8155107
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| | |||||||||| || ||||  |||||||||||  |||||||  |||||||||||| ||||  ||| |||||||    
T  8155191 ttctgatttttttgggaagtttcagaacaattcgatcaagtagtccgaaaacccgatttttgactaagaacaggtaataatgacc 8155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 26555024 - 26555108
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| ||||||| |||||||| ||||||||||   |||||||   ||||| ||||| ||||  |||||||||||    
T  26555024 ttctgattttctgggaaagtttcagagcaatccgatcaagtagcccgaaaacccgtttttttactaagaacatgtaacaatgacc 26555108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 42864969 - 42865053
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||||| |||||| ||||| |||||||| |||||||||||  |||||||  ||||||||| || ||||  | |||||||||    
T  42864969 ttctaattttctggggatgtttcagagcaatccgatcaagtagtccgaaaacctgatttttgaccaagaacaggtgacaatgacc 42865053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 43737374 - 43737290
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||| || ||||||||||||| ||||||||||   |||||||   ||||| ||||| ||||  |||||||||||    
T  43737374 ttctgattttctgggaaaatttcggagcaatccgatcaagtagcccgaaaacccggtttttaactaagaacatgtaacaatgacc 43737290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 29289503 - 29289578
Alignment:
Q  140 tggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||||||||||||||| ||||||||||| | |||||||  |||||||||||| |||| ||||||||||||||    
T  29289503 tggggaagtttcggagcaatttgatcaagtagcacgaaaacctgatttttgactaagaacatctaacaatgaccta 29289578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 14037832 - 14037918
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||| ||||||| |||| |||| |||||||||||||||||||| | ||||||   |||||||||||| |||||||||||||||||||    
T  14037832 ttctaattttattgggatgttttggagcaatctgatcaagtagcacgaaaactagatttttgactaagaacaactaacaatgaccta 14037918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 2813091 - 2813175
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| ||||||||||   |||||||  |||||||||||| ||||  |||||||||||    
T  2813091 ttctgattttctggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaatgacc 2813175  T

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Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 3717149 - 3717233
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||| |||||||||||||| |||||||||||  |||||||  |||||||||||| ||||  |||||||||||    
T  3717149 ttctgattttttggggatgtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgtaacaatgacc 3717233  T

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Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 16450507 - 16450411
Alignment:
Q  128 cttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacctagatcataat 224  Q
    ||||||||||| | || |||||||| ||||||||||||||||||    |||||| ||||||||||||| |||| |||||||||||||| | ||||||    
T  16450507 cttctgattttctaggtaagtttcgaagcaatctgatcaagtagcccaaaaaccaaatttttgactaagaacagctaacaatgacctaaaacataat 16450411  T

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Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 21514898 - 21514982
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||| ||||||||||||||||||||||||||| |||||||||||  ||||| |  |||||||||||| ||||  |||||||||||    
T  21514898 ttctaattttatggggaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaggtaacaatgacc 21514982  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 13800891 - 13800978
Alignment:
Q  126 ttcttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||||||||| | || |||||||||||||||| |||||||||||   |||| |  |||||||||||| |||||||||||||||||    
T  13800891 ttcttctgattttctaggcaagtttcggagcaatccgatcaagtagttcaaaaatccgatttttgactaagaacaactaacaatgacc 13800978  T

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Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 5699858 - 5699774
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||| ||  |||||||||||| || |  |||||||||||    
T  5699858 ttctgattttctggggaagtttcggagcaatccgatcaagtagtccgaaatcccgatttttgactaagaataggtaacaatgacc 5699774  T

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Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 34528730 - 34528648
Alignment:
Q  131 ctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    ||||||||||| |||||||| ||||||||| ||||||||||   |||||||  |||||||||||| |||| |||| |||||||    
T  34528730 ctgattttatgaggaagttttggagcaatccgatcaagtagaccgaaaaccagatttttgactaagaacagctaataatgacc 34528648  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 4508169 - 4508253
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| || ||||||||||||||||||  |||||||||   |||||||  |||||||||||| ||||  |||||||||||    
T  4508169 ttctgattttctgcggaagtttcggagcaatccaatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaatgacc 4508253  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 23407089 - 23407005
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||||||||||||  |||||||||   ||||||   |||||||||||| ||||| ||| |||||||    
T  23407089 ttctgattttctggggaagtttcggagcaatcaaatcaagtagcccgaaaacttgatttttgactaagaacaagtaataatgacc 23407005  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 29519571 - 29519487
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| || ||||||||||||||||| |||||||||||   |||||||  ||||||||| || ||||  |||||||||||    
T  29519571 ttctgattttctgaggaagtttcggagcaatttgatcaagtagctcgaaaacccgatttttgaccaagaacacgtaacaatgacc 29519487  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 6704009 - 6704079
Alignment:
Q  144 gaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    |||||||| ||||||||||||||| ||||  |||||||| ||||||||| | ||||| ||||||||||||||    
T  6704009 gaagtttcagagcaatctgatcaaatagtccgaaaaccggatttttgac-attaacagctaacaatgaccta 6704079  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 2539743 - 2539700
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagt 172  Q
    |||||||||| |||| |||||||||||||||| |||||||||||    
T  2539743 ttctgattttctgggcaagtttcggagcaatccgatcaagtagt 2539700  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 7413042 - 7412971
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataaca 200  Q
    |||||||||| || |||||||||||||||||| |||||| ||||  |||||||  ||||||| |||| ||||    
T  7413042 ttctgattttctgtggaagtttcggagcaatccgatcaactagtccgaaaacctgatttttggctaagaaca 7412971  T

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Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 17264702 - 17264619
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgac 212  Q
    |||||||||| |||||||||||||||||||||  |||||||||    |||||  ||||||| ||||| ||||  ||||||||||    
T  17264702 ttctgattttctggggaagtttcggagcaatcccatcaagtagcccaaaaactcaatttttaactaagaacaggtaacaatgac 17264619  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 4893419 - 4893379
Alignment:
Q  149 ttcggagcaatctgatcaagtagtaagaaaaccgaattttt 189  Q
    ||||||||||||||||||||||||  ||||||||| |||||    
T  4893419 ttcggagcaatctgatcaagtagttcgaaaaccgatttttt 4893379  T

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Target: scaffold0027 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 141831 - 141915
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  |||||||  |||||||||||| ||||   ||||||||||    
T  141831 ttctgattttctggggaagtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgcaacaatgacc 141915  T

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Target: scaffold0508 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 3261 - 3346
Alignment:
Q  129 ttctgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaacc-gaatttttgactaataacaactaacaatgacc 213  Q
    |||||||||| |||||||||||| |||||||||||||||||||   ||||||| || ||||| ||||| ||||| |||||||||||    
T  3261 ttctgattttctggggaagtttcagagcaatctgatcaagtagcccgaaaacctgatttttttactaagaacaagtaacaatgacc 3346  T

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Target: scaffold0564 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 4660 - 4578
Alignment:
Q  132 tgattttatggggaagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacct 214  Q
    ||||||| |||  |||||||||||||||| |||||| |||    ||||||| ||||| |||||  ||||||||||||||||||    
T  4660 tgattttctggccaagtttcggagcaatccgatcaaatagctcaaaaaccgtattttggactaggaacaactaacaatgacct 4578  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 1961 - 2015
Alignment:
Q  160 ctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgacct 214  Q
    ||||||||||| |  |||||||||||| |||||||| | ||||||||||||||||    
T  1961 ctgatcaagtaatccgaaaaccgaattattgactaaaaccaactaacaatgacct 2015  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 59853 - 59923
Alignment:
Q  145 aagtttcggagcaatctgatcaagtagtaagaaaaccgaatttttgactaataacaactaacaatgaccta 215  Q
    ||||||||||| ||||||||||||||    ||||| | ||||||||||||| |||  ||||||||||||||    
T  59853 aagtttcggagaaatctgatcaagtaacccgaaaatcaaatttttgactaagaacggctaacaatgaccta 59923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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