View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7046_low_3 (Length: 246)

Name: NF7046_low_3
Description: NF7046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7046_low_3
NF7046_low_3
[»] chr5 (30 HSPs)
chr5 (5-100)||(4895713-4895808)
chr5 (5-100)||(35660587-35660682)
chr5 (5-100)||(37266733-37266828)
chr5 (5-100)||(18625399-18625494)
chr5 (7-100)||(11775795-11775888)
chr5 (7-100)||(14349805-14349898)
chr5 (5-100)||(13032120-13032215)
chr5 (5-100)||(32129595-32129690)
chr5 (2-100)||(34827194-34827292)
chr5 (5-100)||(40753140-40753235)
chr5 (6-100)||(39902417-39902511)
chr5 (7-97)||(43309113-43309203)
chr5 (5-100)||(8440949-8441044)
chr5 (9-98)||(29340999-29341087)
chr5 (22-99)||(36290605-36290682)
chr5 (6-99)||(18653364-18653456)
chr5 (44-100)||(4592802-4592858)
chr5 (2-100)||(32793376-32793473)
chr5 (22-99)||(41660109-41660186)
chr5 (7-99)||(3057419-3057510)
chr5 (29-99)||(2984392-2984462)
chr5 (7-100)||(3057135-3057227)
chr5 (23-95)||(27428877-27428949)
chr5 (35-99)||(43222129-43222193)
chr5 (22-99)||(3041302-3041380)
chr5 (10-71)||(1475638-1475699)
chr5 (31-99)||(10362018-10362086)
chr5 (23-98)||(31653039-31653114)
chr5 (33-94)||(14688582-14688643)
chr5 (64-100)||(28142812-28142848)
[»] chr4 (51 HSPs)
chr4 (7-100)||(19901898-19901991)
chr4 (5-100)||(56558281-56558376)
chr4 (5-100)||(34778423-34778518)
chr4 (6-100)||(5416445-5416538)
chr4 (7-100)||(23610644-23610737)
chr4 (5-100)||(3952148-3952243)
chr4 (5-100)||(5763140-5763235)
chr4 (5-100)||(30567903-30567998)
chr4 (5-100)||(24073618-24073713)
chr4 (5-100)||(33247108-33247203)
chr4 (6-100)||(18207019-18207113)
chr4 (5-100)||(12312453-12312549)
chr4 (5-100)||(33262530-33262625)
chr4 (6-100)||(38079699-38079793)
chr4 (22-99)||(56269071-56269148)
chr4 (6-99)||(1871280-1871372)
chr4 (7-100)||(39862519-39862612)
chr4 (7-99)||(47922346-47922439)
chr4 (5-71)||(12153185-12153251)
chr4 (5-100)||(47922057-47922148)
chr4 (22-99)||(36688183-36688260)
chr4 (2-71)||(52018794-52018863)
chr4 (23-99)||(56453816-56453892)
chr4 (22-99)||(5524450-5524527)
chr4 (10-99)||(26428971-26429061)
chr4 (7-99)||(34927488-34927581)
chr4 (22-99)||(37002246-37002323)
chr4 (22-99)||(42010120-42010197)
chr4 (60-100)||(12241441-12241481)
chr4 (2-98)||(23474115-23474210)
chr4 (22-99)||(1015849-1015926)
chr4 (64-99)||(31862257-31862292)
chr4 (5-51)||(33524313-33524359)
chr4 (22-94)||(17493010-17493083)
chr4 (22-94)||(32146510-32146583)
chr4 (22-94)||(46238974-46239047)
chr4 (2-99)||(48914494-48914590)
chr4 (22-94)||(53526096-53526169)
chr4 (22-94)||(55160365-55160438)
chr4 (29-94)||(25219003-25219070)
chr4 (43-99)||(25442190-25442246)
chr4 (37-97)||(40215455-40215515)
chr4 (35-99)||(48084533-48084597)
chr4 (32-98)||(13493276-13493342)
chr4 (29-99)||(42844189-42844259)
chr4 (22-94)||(17317215-17317287)
chr4 (2-99)||(50483532-50483628)
chr4 (22-54)||(5361474-5361506)
chr4 (29-61)||(5817976-5818008)
chr4 (132-164)||(23119624-23119656)
chr4 (7-99)||(36532629-36532719)
[»] chr8 (32 HSPs)
chr8 (5-100)||(30426647-30426742)
chr8 (5-100)||(36991358-36991453)
chr8 (5-100)||(28069721-28069816)
chr8 (5-100)||(10672492-10672585)
chr8 (149-224)||(41511124-41511199)
chr8 (6-100)||(41511264-41511358)
chr8 (6-100)||(44859148-44859240)
chr8 (2-100)||(40695223-40695320)
chr8 (7-100)||(10652597-10652690)
chr8 (22-99)||(26749543-26749620)
chr8 (7-100)||(28318876-28318975)
chr8 (19-100)||(24102018-24102099)
chr8 (7-99)||(45113273-45113366)
chr8 (7-99)||(6014197-6014290)
chr8 (2-98)||(18689495-18689590)
chr8 (7-99)||(42761716-42761808)
chr8 (32-99)||(34612567-34612634)
chr8 (5-44)||(5033310-5033349)
chr8 (23-98)||(24557177-24557252)
chr8 (22-99)||(1937149-1937227)
chr8 (29-99)||(36748494-36748563)
chr8 (22-94)||(17867654-17867727)
chr8 (18-57)||(12177572-12177611)
chr8 (18-57)||(12422000-12422039)
chr8 (36-78)||(5033108-5033150)
chr8 (5-75)||(37966422-37966491)
chr8 (32-99)||(21486926-21486993)
chr8 (23-97)||(3763518-3763592)
chr8 (29-98)||(21360280-21360349)
chr8 (35-99)||(21486300-21486362)
chr8 (70-99)||(30796281-30796310)
chr8 (35-99)||(6399927-6399991)
[»] chr6 (27 HSPs)
chr6 (5-100)||(4804450-4804545)
chr6 (5-100)||(12412639-12412734)
chr6 (7-100)||(7162086-7162179)
chr6 (7-100)||(21159349-21159442)
chr6 (5-100)||(13089727-13089822)
chr6 (5-100)||(17944164-17944259)
chr6 (5-100)||(1249126-1249219)
chr6 (7-100)||(27826540-27826633)
chr6 (7-99)||(227543-227636)
chr6 (29-98)||(7215854-7215923)
chr6 (22-99)||(24484882-24484959)
chr6 (7-99)||(13888502-13888595)
chr6 (29-99)||(2800613-2800683)
chr6 (5-57)||(32737902-32737954)
chr6 (45-100)||(29698165-29698220)
chr6 (132-170)||(12412569-12412607)
chr6 (22-99)||(2142288-2142365)
chr6 (64-99)||(2720376-2720411)
chr6 (23-98)||(17828564-17828639)
chr6 (33-99)||(12734413-12734478)
chr6 (22-94)||(7098190-7098263)
chr6 (22-94)||(7545645-7545718)
chr6 (5-57)||(1516185-1516236)
chr6 (5-57)||(1518274-1518325)
chr6 (29-99)||(32254033-32254103)
chr6 (6-51)||(30460875-30460919)
chr6 (5-57)||(1515520-1515571)
[»] chr2 (29 HSPs)
chr2 (5-100)||(35316827-35316922)
chr2 (5-100)||(13238683-13238778)
chr2 (5-100)||(28564894-28564989)
chr2 (5-100)||(23259465-23259560)
chr2 (29-97)||(30709115-30709183)
chr2 (22-99)||(8988858-8988935)
chr2 (22-99)||(374996-375073)
chr2 (6-96)||(2063359-2063449)
chr2 (6-57)||(11864914-11864965)
chr2 (22-99)||(23459841-23459918)
chr2 (2-98)||(15709772-15709867)
chr2 (7-99)||(21454476-21454566)
chr2 (2-98)||(36929720-36929815)
chr2 (9-99)||(19908783-19908871)
chr2 (5-71)||(45625057-45625123)
chr2 (6-99)||(30857658-30857750)
chr2 (7-99)||(4446876-4446968)
chr2 (22-94)||(13780506-13780579)
chr2 (23-98)||(35315284-35315359)
chr2 (23-98)||(38397085-38397160)
chr2 (22-99)||(29188656-29188734)
chr2 (22-94)||(6288050-6288125)
chr2 (22-94)||(40254144-40254217)
chr2 (32-100)||(4603114-4603182)
chr2 (7-50)||(38824078-38824121)
chr2 (7-50)||(40640722-40640765)
chr2 (22-94)||(3594865-3594938)
chr2 (9-94)||(19905889-19905973)
chr2 (29-97)||(34512027-34512095)
[»] chr7 (39 HSPs)
chr7 (6-100)||(4888469-4888563)
chr7 (5-100)||(9559032-9559127)
chr7 (5-100)||(21151154-21151249)
chr7 (5-100)||(12139328-12139424)
chr7 (5-100)||(45260405-45260500)
chr7 (6-100)||(7362570-7362664)
chr7 (6-100)||(16366520-16366614)
chr7 (18-100)||(25084719-25084801)
chr7 (6-100)||(44647964-44648060)
chr7 (5-100)||(47226054-47226147)
chr7 (5-100)||(18198258-18198353)
chr7 (7-99)||(33450509-33450602)
chr7 (6-99)||(989132-989224)
chr7 (7-99)||(47500262-47500355)
chr7 (22-99)||(47799895-47799972)
chr7 (23-100)||(32915958-32916035)
chr7 (7-99)||(34985925-34986018)
chr7 (6-98)||(39855793-39855884)
chr7 (22-99)||(30588538-30588615)
chr7 (32-99)||(46802336-46802403)
chr7 (7-99)||(29631051-29631140)
chr7 (22-97)||(47080433-47080509)
chr7 (2-53)||(47271123-47271173)
chr7 (29-94)||(19027685-19027751)
chr7 (29-94)||(20726885-20726951)
chr7 (29-99)||(40023258-40023328)
chr7 (22-94)||(14696752-14696825)
chr7 (22-99)||(19889029-19889106)
chr7 (29-77)||(29844316-29844364)
chr7 (23-98)||(7712363-7712438)
chr7 (22-94)||(30102501-30102574)
chr7 (22-87)||(35737128-35737193)
chr7 (23-99)||(8149612-8149688)
chr7 (35-99)||(32916172-32916236)
chr7 (23-97)||(7373872-7373946)
chr7 (33-98)||(24193597-24193662)
chr7 (22-99)||(28528554-28528631)
chr7 (7-52)||(33608857-33608901)
chr7 (63-99)||(11828945-11828981)
[»] chr3 (25 HSPs)
chr3 (6-100)||(43719926-43720020)
chr3 (5-100)||(2229985-2230080)
chr3 (7-100)||(27033653-27033746)
chr3 (5-100)||(19830409-19830504)
chr3 (5-100)||(34373833-34373928)
chr3 (2-100)||(46167395-46167493)
chr3 (5-100)||(34373563-34373658)
chr3 (6-95)||(40851781-40851870)
chr3 (5-86)||(24754673-24754754)
chr3 (5-86)||(24763670-24763751)
chr3 (7-99)||(48084822-48084915)
chr3 (7-100)||(12402968-12403061)
chr3 (22-99)||(31523663-31523740)
chr3 (22-99)||(42613083-42613160)
chr3 (22-99)||(49679265-49679342)
chr3 (5-100)||(550795-550889)
chr3 (33-99)||(1995447-1995513)
chr3 (2-98)||(29586340-29586435)
chr3 (9-98)||(10474421-10474509)
chr3 (29-99)||(40810357-40810428)
chr3 (33-98)||(54911658-54911723)
chr3 (5-100)||(566752-566847)
chr3 (23-98)||(33632827-33632901)
chr3 (6-35)||(24647905-24647934)
chr3 (33-97)||(25285843-25285907)
[»] scaffold0035 (1 HSPs)
scaffold0035 (5-100)||(16375-16470)
[»] scaffold0012 (1 HSPs)
scaffold0012 (5-100)||(208065-208160)
[»] chr1 (32 HSPs)
chr1 (5-100)||(12151769-12151864)
chr1 (5-100)||(50294041-50294136)
chr1 (5-100)||(50484388-50484483)
chr1 (2-100)||(23861927-23862028)
chr1 (5-100)||(48327132-48327226)
chr1 (9-87)||(7840661-7840739)
chr1 (29-99)||(39426213-39426283)
chr1 (5-57)||(12380855-12380907)
chr1 (5-57)||(12384922-12384974)
chr1 (5-100)||(40328280-40328372)
chr1 (7-99)||(18976284-18976377)
chr1 (23-99)||(5047377-5047453)
chr1 (7-66)||(45978041-45978100)
chr1 (2-100)||(24977242-24977339)
chr1 (8-97)||(32361288-32361377)
chr1 (22-99)||(52280034-52280111)
chr1 (41-100)||(12380924-12380983)
chr1 (41-100)||(12384991-12385050)
chr1 (33-99)||(26860056-26860122)
chr1 (22-99)||(30077639-30077716)
chr1 (36-99)||(24413291-24413354)
chr1 (32-99)||(32887785-32887852)
chr1 (33-99)||(26372255-26372321)
chr1 (2-52)||(30860744-30860794)
chr1 (7-58)||(1228520-1228572)
chr1 (22-94)||(6948825-6948899)
chr1 (47-98)||(7844992-7845043)
chr1 (60-99)||(46608410-46608449)
chr1 (22-94)||(18107316-18107389)
chr1 (22-99)||(46045690-46045767)
chr1 (59-99)||(23916089-23916129)
chr1 (29-98)||(32618805-32618873)
[»] scaffold0250 (1 HSPs)
scaffold0250 (8-100)||(7149-7241)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-100)||(9179-9274)
[»] scaffold0009 (1 HSPs)
scaffold0009 (7-100)||(6415-6508)
[»] scaffold0126 (1 HSPs)
scaffold0126 (2-100)||(22418-22515)
[»] scaffold0171 (1 HSPs)
scaffold0171 (32-99)||(17311-17378)
[»] scaffold0062 (1 HSPs)
scaffold0062 (2-98)||(58684-58779)
[»] scaffold0006 (1 HSPs)
scaffold0006 (5-66)||(73835-73896)
[»] scaffold0664 (1 HSPs)
scaffold0664 (22-94)||(4695-4768)
[»] scaffold0456 (2 HSPs)
scaffold0456 (132-169)||(13629-13666)
scaffold0456 (5-52)||(13730-13777)
[»] scaffold0121 (1 HSPs)
scaffold0121 (32-98)||(29574-29640)


Alignment Details
Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 4895713 - 4895808
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  4895713 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 4895808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 35660587 - 35660682
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  35660587 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 35660682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 37266828 - 37266733
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  37266828 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccatcattaattata 37266733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 18625399 - 18625494
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  18625399 gcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 18625494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 11775888 - 11775795
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||    
T  11775888 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgtcattaattata 11775795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 14349898 - 14349805
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  14349898 aaaataaatggagttttgtaagttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 14349805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 13032215 - 13032120
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||  || ||||||||||||| ||||||||||||||||||||||||    
T  13032215 gcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccatcattaattata 13032120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 32129595 - 32129690
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  32129595 gcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 32129690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 34827292 - 34827194
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  34827292 ttagcaaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaattata 34827194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 40753140 - 40753235
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  40753140 gcaaaataaataaagttttgcaagttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattata 40753235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 39902511 - 39902417
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||  |||||||||||||||| ||| | ||||||||||||||||||    
T  39902511 caaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatcattaattata 39902417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 43309203 - 43309113
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| || ||||| ||| ||||| |||||||||||||||    
T  43309203 aaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccatcattaatt 43309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 8440949 - 8441044
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||||||  || | | |||||||||||| |||||||||||||||||||||    
T  8440949 gcaaaataaatggagttttgcaagttggaggtagatagacaccaaaaatagatggtgcgacataccactaagtgtgtcccaccatcattaattata 8441044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 29341087 - 29340999
Alignment:
Q  9 aataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||||||||||| | |||| ||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  29341087 aataaatggagtat-gcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccatcattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 36290682 - 36290605
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||||||||||||    
T  36290682 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattat 36290605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 18653456 - 18653364
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||||| || || |||||| |||||| ||| |||||| | |||||||    
T  18653456 caaaataaatggagttt-gcaatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtgagtctcaccattaataattat 18653364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 4592858 - 4592802
Alignment:
Q  44 cacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaattata 4592802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 32793473 - 32793376
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||  ||| || |||||||||| ||||||||||||||| |||  || ||| ||||||| |||||||| ||||| |||||||    
T  32793473 ttagcaaaataaatggagttta-caatttagagagagatatacacaaaaaatagatgatgattcttactactaagtaggtcccacaatcatcaattata 32793376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 41660186 - 41660109
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  ||||||  | ||||| ||||||||||||||||||||||||    
T  41660186 ttgcaatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaattat 41660109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 3057510 - 3057419
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||| ||| | ||||||||||||||| |||||| |||| |||| ||||||||| ||||| || ||| |||||||||||||    
T  3057510 aaaataaatagagtttt-caattcggagagagatagacaaaaaaaaaagatgatggatcctaccacaaagtgagttccatcatcattaattat 3057419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 2984392 - 2984462
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||| ||||||  | |||  ||||| |||||| |||||||||||||||||||||||    
T  2984392 ttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaattat 2984462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 3057135 - 3057227
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||| ||| |||| ||||| ||||||| |||||||||||||||  ||| |||||||| |||||| ||| ||  |||||||||||||    
T  3057135 aaaataaatggaattt-gcaatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaattata 3057227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 27428877 - 27428949
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaa 95  Q
    ||||| ||||| |||||||||||||||||||||||  ||  |||||||| |||||| || |||||||||||||    
T  27428877 tgcaatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 43222193 - 43222129
Alignment:
Q  35 agagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||||||||||  |||||| || || ||| ||| |||||||||||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaattat 43222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3041302 - 3041380
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaataga-taatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||| ||||||||   | |  ||||||||| ||||||| ||||||||||||||||||||||    
T  3041302 ttgcaatttggagagagatagatacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattat 3041380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 1475638 - 1475699
Alignment:
Q  10 ataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctacca 71  Q
    |||||||| |||||||||||| |||||| ||||| ||||||||||| || ||||||| ||||    
T  1475638 ataaatggtgttttgcaagtttgagagaaatagatacaaaaaatagctagtgggtcccacca 1475699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 10362018 - 10362086
Alignment:
Q  31 ggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||| ||| ||||| | || ||| |||||||| |||||||||| |||| |||||||||||    
T  10362018 ggagagagatagagacataaaattggtagtggatcctaccattaagtgggtctcaccgtcattaattat 10362086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 31653114 - 31653039
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||| ||||||||||||| ||||| ||||||||||  | ||||||| | |||||| ||| ||| |||||||||||    
T  31653114 tgcaatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcacaatcattaatta 31653039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 14688643 - 14688582
Alignment:
Q  33 agagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||||| |||||| |||||||||| ||| | |||||| ||||||| | ||||||||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcatta 14688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 28142812 - 28142848
Alignment:
Q  64 tcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||| |||||| |||||||||||||||||||||    
T  28142812 tcctaccattaagtgagtcccaccatcattaattata 28142848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 19901898 - 19901991
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  19901898 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 19901991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 56558376 - 56558281
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  56558376 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtgggtcccaccatcattaattata 56558281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 34778518 - 34778423
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  34778518 gcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccatcattaattata 34778423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 5416445 - 5416538
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  5416445 caaaataaatggagttttgcaagttggagagagatagacac-aaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattata 5416538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 23610737 - 23610644
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||| ||||    
T  23610737 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccatcattaaatata 23610644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 3952148 - 3952243
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  3952148 gcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccatcattaattata 3952243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 5763140 - 5763235
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  5763140 gcaaaatatatggagttttacaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 5763235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 30567998 - 30567903
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||    
T  30567998 gcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaattata 30567903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 24073713 - 24073618
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  24073713 gcaaaataaatggagatttgtaagttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcattaattata 24073618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 33247108 - 33247203
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||| ||||| ||||||||||||||||||    
T  33247108 gcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccatcattaattata 33247203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 18207019 - 18207113
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||| ||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  18207019 caaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcatcattaattata 18207113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 12312453 - 12312549
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagac-acaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||  ||| |||||||||||||||||||||| ||||||||||||||    
T  12312453 gcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatcatcattaattata 12312549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 33262530 - 33262625
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||| | ||||||||||||||||||||||    
T  33262530 gcaaaataaattgtgttttgcaagttagagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaattata 33262625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 38079699 - 38079793
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||||||  |||||||||| ||||||||| | ||||||||||||||||||    
T  38079699 caaaataaatggagttttgctagtttgagagagatagacacaagaaatagatggtgggtcctactactaagtggattccaccatcattaattata 38079793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 56269071 - 56269148
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||    
T  56269071 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattat 56269148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 1871372 - 1871280
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||| | |||| ||||||||||||||||| |||| ||||||| ||| |||||| ||||||||||||||| |||||||||||||    
T  1871372 caaaataaatggagtat-gcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtcccatcatcattaattat 1871280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 39862612 - 39862519
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||||||||  || |||||| |||||| || || ||||||||||||||||||    
T  39862612 aaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccatcattaattata 39862519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 47922346 - 47922439
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||| ||||  |||||||    
T  47922346 aaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcccatcatctataattat 47922439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 12153251 - 12153185
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctacca 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| ||||    
T  12153251 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaattagatggtgggtcccacca 12153185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 47922057 - 47922148
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||| |||||||||||    | ||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||    
T  47922057 gcaaaataaatggaattttgcaagtt----aaagataaacacaaaaaatagatagtgggtcttaccactaagtgggttccaccatcattaaatata 47922148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 36688183 - 36688260
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  || |||||| ||||||||||||||||||||||||||||||    
T  36688183 ttgcaatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaattat 36688260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 52018863 - 52018794
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctacca 71  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||| ||| ||||    
T  52018863 ttagcaaaataaatggagttttgcaagttggagagagatagatacaaaaaataaatagtggatcccacca 52018794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 56453816 - 56453892
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||| ||||||||||||||||||||||||||| |  ||||||||| || ||||||||||||||||||||| |||||    
T  56453816 tgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggtcccaccatcattcattat 56453892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 5524527 - 5524450
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||| ||||||||  |  ||||||||| || |||||||||||||||||||||||||||    
T  5524527 ttgcaatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaattat 5524450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 26429061 - 26428971
Alignment:
Q  10 ataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||| |||||||||| ||||||| |||||||||||||| |||||||  || ||||||||||| | |||||| || |||||||||||||    
T  26429061 ataaatgaagttttgcaatttggagaaagatagacacaaaagaatagatggtgagtcctaccactgaatgggtctcatcatcattaattat 26428971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 34927581 - 34927488
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||| ||||||||| ||  |||||||||||||||||| |||||||  |||||||||||| |||||  ||| || |||||||||||||    
T  34927581 aaaataaatggggttttgcaatttaaagagagatagacacaaaagaatagatggtgggtcctaccattaagtatgtctcatcatcattaattat 34927488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 37002246 - 37002323
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||| ||||||||||||||||||||  |  ||| |||||  |||||||||||||||||||||||||||||    
T  37002246 ttgcaatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaattat 37002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 42010197 - 42010120
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||| ||||||||||  |   |||||||| |||||| |||||||||||||||||||||||    
T  42010197 ttgcaatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattat 42010120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 12241441 - 12241481
Alignment:
Q  60 tgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12241441 tgggtcctaccactaagtgggtcccaccatcattaattata 12241481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 23474210 - 23474115
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||||| |||||||||||| | |||| |||| |||||||||||||| |||||||||  |||||||||| | | ||||  ||||||||||||||||||    
T  23474210 ttagcataataaatggagtat-gcaatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccaccatcattaatta 23474115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 1015849 - 1015926
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| || |||||||||||||||||||||||  |  ||||||| | || || ||||||||||||||||||||||||    
T  1015849 ttgcaatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaattat 1015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 99
Target Start/End: Original strand, 31862257 - 31862292
Alignment:
Q  64 tcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||||||||||||||||||||    
T  31862257 tcctaccactaagtgggtcccaccatcattaattat 31862292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 33524359 - 33524313
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaa 51  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||    
T  33524359 gcaaaataaatggagatttggaagttggagagagatagatacaaaaa 33524313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 17493083 - 17493010
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| |||||||||||||||||||||||| ||  |  ||||||||| |||||||||| | ||||||||||||    
T  17493083 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggattccaccatcatta 17493010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 32146583 - 32146510
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||| |||||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  32146583 ttgcaatttggagagagatagatacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 32146510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 46239047 - 46238974
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||| |||||||||||||||||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  46239047 ttgcaatttgaagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 46238974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 48914494 - 48914590
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||  | |||| || ||||||||| |||||| |||||||||  ||||||||| ||  |||||||| || | ||||||||||||    
T  48914494 ttagcaaaataaatggagaat-gcaatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcattaattat 48914590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 53526169 - 53526096
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||||| |||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  53526169 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 53526096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 55160365 - 55160438
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||| |||||||||||||||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  55160365 ttgcaatttggaaagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 55160438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 25219070 - 25219003
Alignment:
Q  29 ttggagagagatagacacaaaaaataga--taatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||||||||||||||||||||| | |  |  ||||||||| |||||||||| ||||||||||||||    
T  25219070 ttggagagagatagacacaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 25219003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 25442190 - 25442246
Alignment:
Q  43 acacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||  |||||||||||||||||||| || ||||  ||||||||||    
T  25442190 acacaaaaaatagattgtgggtcctaccactaagtggatctcaccgacattaattat 25442246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 40215455 - 40215515
Alignment:
Q  37 agatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    ||||| ||| ||||| ||||| |||| |||||||||| |||| ||||||||||||||||||    
T  40215455 agatacacataaaaattagattatggatcctaccacttagtgagtcccaccatcattaatt 40215515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 48084533 - 48084597
Alignment:
Q  35 agagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||| |||| |||  |  ||||| ||| ||||||||||||||||||||||||||||||    
T  48084533 agagatagacataaaacataagtggtgggttctagcactaagtgggtcccaccatcattaattat 48084597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 13493342 - 13493276
Alignment:
Q  32 gagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||||||||||||||  |||||||||| ||| ||| ||||||||||| |||||   |||||||||||    
T  13493342 gagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtccctttatcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 42844189 - 42844259
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||| ||||||||||| |||||||| | || ||||||| | ||| ||| |||| ||||||||||||||    
T  42844189 ttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctccatcattaattat 42844259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 17317287 - 17317215
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||||| |||||| ||  | |||| ||||| |||||||||| ||||||||||||||    
T  17317287 ttgcaatttggagagagatagacaaaaaaaaataagtgatgg-tcctatcactaagtggatcccaccatcatta 17317215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 50483532 - 50483628
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||| |||| | |||| ||||||| ||||||||||  |||||||||| | | ||| |||| |||||| ||| ||  ||||||||||||    
T  50483532 ttagcaaaataaattgagtat-gcaatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattatcattaattat 50483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 5361506 - 5361474
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaata 54  Q
    |||||| ||||||||||||||||||||||||||    
T  5361506 ttgcaatttggagagagatagacacaaaaaata 5361474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 5818008 - 5817976
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatg 61  Q
    |||||||||||||||||||||||| ||||||||    
T  5818008 ttggagagagatagacacaaaaaagagataatg 5817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 23119624 - 23119656
Alignment:
Q  132 atctctccaaattgaagaaatggagaggatcct 164  Q
    |||||||||||| ||||||||||||||||||||    
T  23119624 atctctccaaatggaagaaatggagaggatcct 23119656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 36532719 - 36532629
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||   ||| || |||||||||||||||| |||||| ||| ||| ||||| || | ||||||| ||||||| |||||||||    
T  36532719 aaaataaatggagttca-caatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttccaccat-attaattat 36532629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 30426647 - 30426742
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  30426647 gcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 30426742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 36991453 - 36991358
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36991453 gcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccaccatcattaattata 36991358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 28069816 - 28069721
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  28069816 gcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 28069721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 10672492 - 10672585
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||    
T  10672492 gcaaaataaatggagttttgcaagttggaga--gatagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaattata 10672585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 41511199 - 41511124
Alignment:
Q  149 aaatggagaggatcctaacccttattcgttttagggttgttgccacttcattcacgtggctttatccattttctta 224  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  41511199 aaatggagaggatcctaacccttattcgttgtagggttgttgccacttccttcacgtggctttatccattttctta 41511124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 41511358 - 41511264
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||| ||||||||| | |||||||||||| ||||||||| |||||||||| | ||||||||||||||||||    
T  41511358 caaaataaatggagttttgcaagttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaattata 41511264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 44859148 - 44859240
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||| |||||||||||||   ||||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  44859148 caaaataaatggagttttgcaagttagagagagatagact--aaaaatagatggtgggttctaccactaagtgggtcccaccatcattaattata 44859240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 40695223 - 40695320
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  | ||||||||||||||||| || |||||||||||| |||||    
T  40695223 ttagcaaaataaatggagtttgg-aagttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcattagttata 40695320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 10652597 - 10652690
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| |||  |||||| ||| ||||| ||||||||||||||||||||||||    
T  10652597 aaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattgggtcccaccatcattaattata 10652690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 26749543 - 26749620
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||    
T  26749543 ttgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattat 26749620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 28318876 - 28318975
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaata------gataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||      |||| |||||||||||||||||||||||| ||||||||||||||||    
T  28318876 aaaataaatggagttttgcaagtttgagagagatatacaaaaaaaataaaaaaagatagtgggtcctaccactaagtgggtccaaccatcattaattata 28318975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 24102099 - 24102018
Alignment:
Q  19 gttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||  ||||||||||||| |||||||||||  ||| ||||||||||||||| || ||||||||||||||||||    
T  24102099 gttttgcaagtttaagagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaattata 24102018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 45113366 - 45113273
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| | ||||||||| ||||||||| |||||||||||| |||||||  ||||||| ||||||||||| |||||| |||||||||||||    
T  45113366 aaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgtcccatcatcattaattat 45113273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 6014290 - 6014197
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||| ||||||| || |||||||||| ||||||| ||| |  ||||||||||||    
T  6014290 aaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctattatcattaattat 6014197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 18689590 - 18689495
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||||||||| | | |||| ||||||||||||| ||| | |||||||||| ||| |||||||| ||||||||| ||| ||||||||||||    
T  18689590 ttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 42761808 - 42761716
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||  |  |||| ||| ||||||||||||||| |||||||||| ||| |||||||||| ||||||| ||| |||||||||||||    
T  42761808 aaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttccatcatcattaattat 42761716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 34612634 - 34612567
Alignment:
Q  32 gagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||||||||||  |  ||||||||| ||||||||||||| ||||||||||||||||    
T  34612634 gagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaattat 34612567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 5033349 - 5033310
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagac 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5033349 gcaaaataaatggagttttgcaagttggagagagatagac 5033310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 24557177 - 24557252
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||| ||||| ||||||| | ||| ||||||| ||||||||||||||| |||||| |||||| ||||||||||||    
T  24557177 tgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaatta 24557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 1937149 - 1937227
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaataga-taatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||   | |  ||||||||| ||||||| ||||||||||||||||||||||    
T  1937149 ttgcaatttggagagagatagacacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattat 1937227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 36748494 - 36748563
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||| ||||||||||||||| |||| |  ||||||||||| ||||||| |||||||||||||||||||    
T  36748494 ttggagatagatagacacaaaaa-tagacagcgggtcctaccattaagtggatcccaccatcattaattat 36748563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 17867654 - 17867727
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| |||||||||||||||||||||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  17867654 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 17867727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 12177572 - 12177611
Alignment:
Q  18 agttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  12177572 agttttgcaagttggagagagatagatacaaaaaatagat 12177611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 12422000 - 12422039
Alignment:
Q  18 agttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  12422000 agttttgcaagttggagagagatagatacaaaaaatagat 12422039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 5033150 - 5033108
Alignment:
Q  36 gagatagacacaaaaaatagataatgggtcctaccactaagtg 78  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  5033150 gagatagacacaaaaaatagatggtgggtcctaccactaagtg 5033108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 37966422 - 37966491
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaa 75  Q
    |||||||||||||| ||| |||| ||| ||||||||| |||||||||||||||  | ||||||||||||||    
T  37966422 gcaaaataaatggaattt-gcaatttgaagagagataaacacaaaaaatagattgtaggtcctaccactaa 37966491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 21486993 - 21486926
Alignment:
Q  32 gagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| || | |||||||| ||| ||||| |||| | |||||| ||||||||||||||||||||    
T  21486993 gagagagatggatataaaaaatatatagtgggttctactattaagtgagtcccaccatcattaattat 21486926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 3763518 - 3763592
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    ||||| |||||||| | |||||| |||||| || |  |||||||||||| ||||||||| ||||| |||||||||    
T  3763518 tgcaatttggagagtggtagacaaaaaaaaaaggtggtgggtcctaccattaagtgggttccaccgtcattaatt 3763592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 21360349 - 21360280
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||||| ||||| || ||||||||| | || ||||| |||||||  |||||||| ||||||||    
T  21360349 ttggagagagataaacacataatatagataatagatcataccattaagtggaccccaccattattaatta 21360280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 21486300 - 21486362
Alignment:
Q  35 agagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||  |||||||| | || |||||||||||  ||| ||||||||||||||||    
T  21486300 agagatagacacaaaa--tagataatagatcttaccactaagtaagtctcaccatcattaattat 21486362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 30796310 - 30796281
Alignment:
Q  70 cactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||||||||||||||    
T  30796310 cactaagtgggtcccaccatcattaattat 30796281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 6399991 - 6399927
Alignment:
Q  35 agagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||||||||||  |||||| ||  || |||||| |||||  ||||||||||||    
T  6399991 agagatagacacaaaaaatagatggtgggtcttattaccaagtggatcccattatcattaattat 6399927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 4804545 - 4804450
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  4804545 gcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 4804450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 12412734 - 12412639
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  12412734 gcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaattata 12412639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 7162179 - 7162086
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  7162179 aaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccatcattaattata 7162086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 21159349 - 21159442
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21159349 aaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 21159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 13089727 - 13089822
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  13089727 gcaaaataaatggtgttttgcaagttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaattata 13089822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 17944259 - 17944164
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||||||||||||||    
T  17944259 gcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccatcattaattata 17944164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 1249126 - 1249219
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||| |||||||||||||| |||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  1249126 gcaaaataaatggagttttgtaagttggagagagacagaca--aaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 1249219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 27826633 - 27826540
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||| || || |||||||| | ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  27826633 aaaataactgaagatttgcaaggttgagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 27826540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 227543 - 227636
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||||  |||||||||||||||||||||| |||||||  |||||||||||||||||||| ||||| ||||||| |||||    
T  227543 aaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatcccatcatcattgattat 227636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 7215854 - 7215923
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  7215854 ttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatcattaatta 7215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 24484959 - 24484882
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  ||||||||| ||||||||||||||||||||||||||||||    
T  24484959 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattat 24484882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 13888502 - 13888595
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||| |||||||  ||| |||||||| ||| ||||||||| |||||||||||||    
T  13888502 aaaataaatagagttttgcaatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcattaattat 13888595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 2800613 - 2800683
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||| |||||||||| ||| || ||||| ||||||||||||||||||||| |||||    
T  2800613 ttggagagagatagacacataaaatagatagtggatcataccattaagtgggtcccaccatcattgattat 2800683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 32737954 - 32737902
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  32737954 gcaaaataaatagagttttgcaggttggagagagatagacacaaaaaatagat 32737902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 29698220 - 29698165
Alignment:
Q  45 acaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||  ||| |||||||| ||||||||||||||||||||||||||||    
T  29698220 acaaaaaatagatggtggatcctaccattaagtgggtcccaccatcattaattata 29698165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 12412607 - 12412569
Alignment:
Q  132 atctctccaaattgaagaaatggagaggatcctaaccct 170  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12412607 atctctccaaattgaagaaatggagaggatcctaaccct 12412569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 2142288 - 2142365
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  ||||||| | || || |||||| |||||||||||||||||    
T  2142288 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaattat 2142365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 2720411 - 2720376
Alignment:
Q  64 tcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||||||||||||||||||||    
T  2720411 tcctaccactaagtgggtcccaccatcattaattat 2720376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 17828564 - 17828639
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||| ||||||||||||||||||| |||||||||| ||| | |||| | ||||||| ||||| ||||| ||||||    
T  17828564 tgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatcatcaataatta 17828639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 12734478 - 12734413
Alignment:
Q  33 agagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||| ||||||| ||||||||||  |||| |||||||||  |||||||||||||||||||    
T  12734478 agagagatagaaacaaaaactagataatgga-cctatcactaagtgaatcccaccatcattaattat 12734413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 7098190 - 7098263
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||||| |||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  7098190 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 7098263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 7545718 - 7545645
Alignment:
Q  22 ttgcaagttggagagagatagaca-caaaaaatagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||||| |||||||||  |  ||||||||| |||||||||| |||||| |||||||    
T  7545718 ttgcaatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 1516185 - 1516236
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    |||||||||||||||||| |||| |||||||||||| || |||||||||||||    
T  1516185 gcaaaataaatggagttt-gcaatttggagagagatggatacaaaaaatagat 1516236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 1518274 - 1518325
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    |||||||||||||||||| |||| |||||||||||| || |||||||||||||    
T  1518274 gcaaaataaatggagttt-gcaatttggagagagatggatacaaaaaatagat 1518325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 32254033 - 32254103
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| |||||||||| |||||| || |  ||||||||| || |||||| ||||||| ||||||||||||    
T  32254033 ttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaattat 32254103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 30460919 - 30460875
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaa 51  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||    
T  30460919 caaaataaatggagttt-gcaatttggagaaagatagacacaaaaa 30460875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 1515520 - 1515571
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    |||||||||||||||||| |||| |||||||||||| || | |||||||||||    
T  1515520 gcaaaataaatggagttt-gcaatttggagagagatggataaaaaaaatagat 1515571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 35316922 - 35316827
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  35316922 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccatcattaattata 35316827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 13238778 - 13238683
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  13238778 gcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccatcattaattata 13238683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 28564989 - 28564894
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  28564989 gcaaaataaatggagttttttaagttgtagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 28564894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 23259465 - 23259560
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||| ||||||||||||||||||||    
T  23259465 gcaaaataaatggtgttttgcaagttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcattaattata 23259560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 30709183 - 30709115
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||    
T  30709183 ttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcccaccatcattaatt 30709115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 8988935 - 8988858
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  | || ||||||| ||||||||||||||||||||||||||||||    
T  8988935 ttgcaatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaattat 8988858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 375073 - 374996
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  |||||||||  |||||||||||||||||||||||||||||    
T  375073 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattat 374996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 2063449 - 2063359
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat-aatgggtcctaccactaagtgggtcccaccatcattaat 96  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||||||||   | ||||||||||| |||||||| ||||||||||||||    
T  2063449 caaaataaatagagttt-gcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggttccaccatcattaat 2063359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 11864965 - 11864914
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11864965 caaaataaatggagttttacaagttggagagagatagacacaaaaaatagat 11864914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 23459841 - 23459918
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |   |||||||| |||||| |||||||||||||||||||||||    
T  23459841 ttgcaatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattat 23459918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 15709867 - 15709772
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||||||||| | | |||| ||||||||||||| ||| | |||||||||| ||| |||||||| ||||||||| ||| ||||||||||||    
T  15709867 ttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 21454476 - 21454566
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||| | || || |||||||||||||||||||| |||||  |||||| ||||| ||||||||| |||||||||||||||||    
T  21454476 aaaataaatggagttt-gtaatttagagagagatagacacaaaaa-tagattgtgggtcataccattaagtgggttccaccatcattaattat 21454566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 36929815 - 36929720
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||| ||||||| || || ||||||||| ||| ||| | || |||||||||||||    
T  36929815 ttagcaaaataaatggagtat-gcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcattaatta 36929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 19908871 - 19908783
Alignment:
Q  9 aataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||| | |||| |||||| |||||||||||| |||||||||| || |||||||   |||||||||||||||||||||||||||    
T  19908871 aataaatggagtat-gcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtgggtcccaccatcattaattat 19908783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 45625057 - 45625123
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctacca 71  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||  ||||||| ||||    
T  45625057 gcaaaataaatggagttttacaagttggagagagatagacacaagaaataaattgtgggtcccacca 45625123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 30857658 - 30857750
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||| | | || ||| |||||| ||||||||||||||||||||||| |||||| | ||| ||| || ||||||||||||||||    
T  30857658 caaaataaatggagtat-gtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcacaccatcattaattat 30857750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 4446876 - 4446968
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||  | | ||| ||| ||||||||||||||| |||||||||| ||| |||||||||||| |||||  ||| ||||||||||||    
T  4446876 aaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtttcactatcattaattat 4446968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 13780579 - 13780506
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| |||||||||||||||||||||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  13780579 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 13780506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 35315284 - 35315359
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||| ||| ||||||||||||||| |||||||||||||| || ||| | ||| || |||||||||| ||||||||    
T  35315284 tgcaatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaatta 35315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 38397160 - 38397085
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||| ||| ||||||||||||| | |||||||||| ||||| |||| | |||||| |||||||||||| ||||||    
T  38397160 tgcaatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccaccatcaataatta 38397085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 29188734 - 29188656
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaataga-taatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||   | |  || |||||| ||||||| ||||||||||||||||||||||    
T  29188734 ttgcaatttggagagagatagacacaaaaaaacaagtggtgcgtcctatcactaagcgggtcccaccatcattaattat 29188656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 6288125 - 6288050
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa---tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||||| ||||||   ||  | |||||||||| |||||||||| ||||||||||||||    
T  6288125 ttgcaatttggagagagatagacaaaaaaaaaaataagttatgggtcctatcactaagtggatcccaccatcatta 6288050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 40254144 - 40254217
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| |||| ||||||||||||||||| ||||  |  ||||||||| |||||||||| ||||||||||||||    
T  40254144 ttgcaatttggggagagatagacacaaaataataagtggtgggtcctatcactaagtggatcccaccatcatta 40254217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 4603114 - 4603182
Alignment:
Q  32 gagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||| | | |||| |||||| || |||||| ||  ||||||||||||||||||||||||    
T  4603114 gagagagatagacatagacaatatataatgagttctaccattagatgggtcccaccatcattaattata 4603182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 38824121 - 38824078
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa 50  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  38824121 aaaataaatggagttttgtaatttggagagagatagacaaaaaa 38824078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 40640765 - 40640722
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa 50  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||    
T  40640765 aaaataaatggagttttgcaatttggagagagatatatacaaaa 40640722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 3594938 - 3594865
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||||| |||||| ||  |  ||| ||||| |||||||||| ||||||||||||||    
T  3594938 ttgcaatttggagagagatagacaaaaaaaaataagtggtggatcctatcactaagtggatcccaccatcatta 3594865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 19905973 - 19905889
Alignment:
Q  9 aataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||||||||| | |||| || |||||||||||||||| |||||||||  |||| | ||  | |||||| |||||||||||||||    
T  19905973 aataaatggagtat-gcaattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 34512027 - 34512095
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    ||||||| ||||||||||| |||||||||| |||||  ||| | ||||| |||| ||| ||||||||||    
T  34512027 ttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcattaatt 34512095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 4888563 - 4888469
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  4888563 caaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccatcattaattata 4888469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 9559032 - 9559127
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  9559032 gcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 9559127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 21151249 - 21151154
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||||||||||||||||||||||||    
T  21151249 gcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccatcattaattata 21151154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 12139424 - 12139328
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagt-gggtcccaccatcattaattata 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||    
T  12139424 gcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaattata 12139328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 45260405 - 45260500
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||| ||||||||||||||    
T  45260405 gcaaaataaattgagttttgcaagttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaattata 45260500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 7362664 - 7362570
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||||||||| ||||| ||||||||||||||||||    
T  7362664 caaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcattaattata 7362570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 16366614 - 16366520
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||  ||| ||||||||||||||| |||||||||||||||||||||    
T  16366614 caaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccaccatcattaattata 16366520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 25084719 - 25084801
Alignment:
Q  18 agttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  25084719 agttttgtaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 25084801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 44648060 - 44647964
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtggg--tcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||  |||| |||||||||||||||    
T  44648060 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtctccctccatcattaattata 44647964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 47226054 - 47226147
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  ||  ||||||| |||||||| ||||||||||||||||||||||||    
T  47226054 gcaaaataaatggagttttgcaagttggagagagataaacacaaaaaat--atggtgggtcccaccactaaatgggtcccaccatcattaattata 47226147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 18198353 - 18198258
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||||||||  ||||| || |||||||||| |||||||||||||||||||||    
T  18198353 gcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgagtcccaccatcattaattata 18198258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 33450602 - 33450509
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||| |||||||||||||    
T  33450602 aaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattat 33450509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 989224 - 989132
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| ||||| |||||||||    
T  989224 caaattaaatggagttt-gcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccataattaattat 989132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 47500262 - 47500355
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| |||||||| || |||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||| |||||||||||||    
T  47500262 aaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattat 47500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 47799895 - 47799972
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||    
T  47799895 ttgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattat 47799972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 32916035 - 32915958
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||| ||| |||||||||||||||||||||| ||| |||||||||||| |||||| ||||||||||||| |||||||    
T  32916035 tgcaatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaattata 32915958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 34985925 - 34986018
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||  ||||||  |||||||| || |||||| |||||||||||||    
T  34985925 aaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtcaaaccactaaatgagtcccatcatcattaattat 34986018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 39855793 - 39855884
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||| |||||||||||| | || ||||||||||||||||||| |||| ||||  | |||||||||||||||||||||||| ||||||||||||    
T  39855793 caaattaaatggagttt-gtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtcccatcatcattaatta 39855884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 30588615 - 30588538
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||  ||||||||||||||||||||  | | |||||||| ||||||||||||||||||||||||||||||    
T  30588615 ttgcaatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaattat 30588538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 46802336 - 46802403
Alignment:
Q  32 gagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||| ||||||||||   ||||||||||||||||||||||||||||| | ||||||||    
T  46802336 gagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccaccaccgttaattat 46802403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 29631140 - 29631051
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||| |||| ||| |||||  ||||||||||| ||||||| ||||||| ||||||| || |||||||| ||||||||||||    
T  29631140 aaaataaatggagttt-gcaatttgaagaga--tagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatcattaattat 29631051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 47080509 - 47080433
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaataga-taatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    |||||| ||||||||||||||||||||||||   | | |||||||||| ||||||| ||||||||||||||||||||    
T  47080509 ttgcaatttggagagagatagacacaaaaaaacaagtgatgggtcctatcactaagcgggtcccaccatcattaatt 47080433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 47271123 - 47271173
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaat 53  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  47271123 ttagcaaaataaatggagttt-gcaatttggagagagatagacacaaaaaat 47271173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 19027685 - 19027751
Alignment:
Q  29 ttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||||||||||||||||||||| || ||  ||||||||| |||||||||| ||||||||||||||    
T  19027685 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 20726951 - 20726885
Alignment:
Q  29 ttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||||||||||||||||||||| || ||  ||||||||| |||||||||| ||||||||||||||    
T  20726951 ttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 40023258 - 40023328
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||| ||||||||| | ||||||| |||||| || ||||| |||||||||||||||| ||||||||||    
T  40023258 ttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtcccaccaccattaattat 40023328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 14696752 - 14696825
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| |||||||||||||||||||||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  14696752 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 14696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 19889029 - 19889106
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| || || ||||||||| ||||||||||  |  ||||||||| |||||||||||| |||||||||||||||||    
T  19889029 ttgcaatttagaaagagatagatacaaaaaataagttgtgggtcctatcactaagtgggttccaccatcattaattat 19889106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 29844364 - 29844316
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagt 77  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  29844364 ttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 7712363 - 7712438
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||| || |||||||||||| ||| || ||||||| || ||||||||| ||||||||| |||||||| |||||||    
T  7712363 tgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccaccatctttaatta 7712438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 30102574 - 30102501
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||||| |||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  30102574 ttgcaatttggagagagatagacaaaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 30102501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 35737193 - 35737128
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccacc 87  Q
    |||||| ||||||||||||||||||||||||||  |  ||||||| | ||||| ||||||||||||    
T  35737193 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcccatcactaggtgggtcccacc 35737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 8149688 - 8149612
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||| ||| ||||||||||| ||  ||||||  || |||||| || || |||||||||||||||||||||||||||    
T  8149688 tgcaatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcattaattat 8149612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 32916236 - 32916172
Alignment:
Q  35 agagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||| |||| |||||||| |  |||||| ||||||||||||| | |||||||||||||||||    
T  32916236 agagatacacacgaaaaataggttgtgggtcataccactaagtggattccaccatcattaattat 32916172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 7373946 - 7373872
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    ||||| ||||||||||||||  |||||||||||| | |||||| ||| | ||||| | |||||| ||||||||||    
T  7373946 tgcaatttggagagagataggtacaaaaaatagacagtgggtcttactattaagtagatcccactatcattaatt 7373872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 24193662 - 24193597
Alignment:
Q  33 agagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||||||| |||||||| |||| ||| ||||| ||| ||| ||||| ||||| ||||||    
T  24193662 agagagatagacacataaaatagacaatgagtcttaccattaaatggatcccatcatcagtaatta 24193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 28528631 - 28528554
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||| |||||| |  |  || |||||| ||||||| |  |||||||||||||||||||    
T  28528631 ttgcaatttggagagagatagacaaaaaaaacaagtggtgagtcctatcactaagcgaatcccaccatcattaattat 28528554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 33608857 - 33608901
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaa 52  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  33608857 aaaataaatggagttt-gcaatttggagagagataaacacaaaaaa 33608901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 11828945 - 11828981
Alignment:
Q  63 gtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  11828945 gtcctaccattaagtgggttccaccatcattaattat 11828981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 43719926 - 43720020
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||    
T  43719926 caaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccatcattaattata 43720020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 2230080 - 2229985
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||    
T  2230080 gcaaaataattggagttttgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaattata 2229985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 27033746 - 27033653
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  27033746 aaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccatcattaattata 27033653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 19830409 - 19830504
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||    
T  19830409 gcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccatcattaattata 19830504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 34373928 - 34373833
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||    
T  34373928 gcaaaataaattgtgttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaattata 34373833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 46167493 - 46167395
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||||| ||||||||||    
T  46167493 ttagcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccattattaattata 46167395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 34373563 - 34373658
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||| ||||||||||||||  | |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  34373563 gcaaaataaatagagttttgcaagttccatagagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattata 34373658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 40851870 - 40851781
Alignment:
Q  6 caaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaa 95  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| | |||||||||||||||| |||||||||||    
T  40851870 caaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccatcattaa 40851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 24754754 - 24754673
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccac 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||  |  ||||||||||||||||||||||||    
T  24754754 gcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 24763751 - 24763670
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccac 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||  |  ||||||||||||||||||||||||    
T  24763751 gcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 48084915 - 48084822
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||| |||||||  ||||||| |||||||||||||||||| |||||||||||||    
T  48084915 aaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattat 48084822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 12403061 - 12402968
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||| |||||  ||| | ||||||||||||| |||||||||| ||||||||||    
T  12403061 aaaataaatagagttttgcaagttggagagagatagatataaaaattagatggtggattctaccactaagtgagtcccaccattattaattata 12402968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 31523663 - 31523740
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  |||||||||  |||||||||||||||||||||||||||||    
T  31523663 ttgcaatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattat 31523740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 42613160 - 42613083
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||| ||||||||||||| ||||||||  |  ||||||||| ||||||||||||||||||||||||||||||    
T  42613160 ttgcaatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattat 42613083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 49679265 - 49679342
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |   |||||||| |||||| |||||||||||||||||||||||    
T  49679265 ttgcaatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattat 49679342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 550795 - 550889
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||| |||| ||||||| ||||| | |||||||||||||  ||| ||||| || ||||||||||||||||| |||| |||||    
T  550795 gcaaaataaatggagttt-gcaatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccaccattattatttata 550889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 1995513 - 1995447
Alignment:
Q  33 agagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||| | ||||||||||||| ||||||||| |||||| ||| ||||||||||||||||    
T  1995513 agagagatagacatagaaaatagataatgagtcctaccaataagtgagtctcaccatcattaattat 1995447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 29586435 - 29586340
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||||| |||||||||||| | |||  ||||||||||||||||||| |||||||||| |  ||| ||| | |||||||||| |||||||||||||||    
T  29586435 ttagcataataaatggagtat-gcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcaccatcattaatta 29586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 10474421 - 10474509
Alignment:
Q  9 aataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||||||||||| | |||| || |||||| ||||||||| |||||||||||||| |||||| | |||||| || |||||| |||||||||    
T  10474421 aataaatggagtat-gcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccaccaacattaatta 10474509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 40810357 - 40810428
Alignment:
Q  29 ttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||| ||| |||| |||||||  ||||||  |||||||||||||||||| |||||||||||||    
T  40810357 ttggagagagataaacaaaaaagaatagatggtgggtctaaccactaagtgggtcccatcatcattaattat 40810428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 54911723 - 54911658
Alignment:
Q  33 agagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||| ||| ||||||| || |||||||||||| ||| || || ||||||||||||||||    
T  54911723 agagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaatta 54911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 566752 - 566847
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||||| || ||   || ||||| || ||||||||||||||| | |||| |||||    
T  566752 gcaaaataaatggagttt-gcaatttggagagagatagatacaaaaaaatatatggcggatcctatcattaagtgggtcccacctttattatttata 566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 33632901 - 33632827
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||| ||||||||||||||||||| |||||||||| ||| |||||| | ||| ||| | ||| ||||||||||||    
T  33632901 tgcaatttggagagagatagacacataaaatagatagtggatcctactattaaatggattcca-catcattaatta 33632827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 24647934 - 24647905
Alignment:
Q  6 caaaataaatggagttttgcaagttggaga 35  Q
    ||||||||||||||||||||||||||||||    
T  24647934 caaaataaatggagttttgcaagttggaga 24647905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 25285843 - 25285907
Alignment:
Q  33 agagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    ||||||||||||||| |||||||||| ||| ||||| || ||| || | ||||||||||| ||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaatt 25285907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 16375 - 16470
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||    
T  16375 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaattata 16470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 208160 - 208065
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  208160 gcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcatcattaattata 208065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 12151864 - 12151769
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  12151864 gcaaaataaatggagttttgccagttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattata 12151769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 50294041 - 50294136
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||    
T  50294041 gcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccatcattaattata 50294136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 50484483 - 50484388
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||||| ||||||||||||    
T  50484483 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgtcattaattata 50484388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 23861927 - 23862028
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgg---gtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||    |||||||||||||||| ||||||||||||||||||    
T  23861927 ttagcaaaataaatgaagttttgcaagttggagagagatagacacaaaaaatagatggtggtgaatcctaccactaagtggatcccaccatcattaatta 23862026  T
Q  99 ta 100  Q
    ||    
T  23862027 ta 23862028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 48327132 - 48327226
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||  || ||||||||||||||||||| ||||||||||||||||||    
T  48327132 gcaaaataaatggagatttgcaagttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt-ccaccatcattaattata 48327226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 7840661 - 7840739
Alignment:
Q  9 aataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccacc 87  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||| ||||||||||    
T  7840661 aataaatggagttttgtaagttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtcccacc 7840739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 39426283 - 39426213
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  39426283 ttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatcattaattat 39426213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12380855 - 12380907
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12380855 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12384922 - 12384974
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12384922 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 40328372 - 40328280
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||| |||||  ||||||| |||||||||||||| |||||||||||| |||||    
T  40328372 gcaaaataaatggagttttgcaaattggagaga--tagacacaaaaa-tagatggtgggtcccaccactaagtgggttccaccatcattagttata 40328280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 18976284 - 18976377
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||  ||| ||| |||| ||||| ||||||| |||||||||||||    
T  18976284 aaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggtcccatcatcattaattat 18976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 5047377 - 5047453
Alignment:
Q  23 tgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||| |||||||||||| ||  || |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  5047377 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaattat 5047453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 45978100 - 45978041
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcc 66  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  45978100 aaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc 45978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 24977339 - 24977242
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||  ||||  ||| || ||||||||||||||||||||||||||  ||| |||||||||||||||||| |||| ||||||| |||||    
T  24977339 ttagcaaaataaatgatgttta-caatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcattagttata 24977242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 32361288 - 32361377
Alignment:
Q  8 aaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatt 97  Q
    |||||| | |||||||| ||||||||||||||| ||||||||| ||||||  ||| |||||| ||||||| ||||||| |||||||||||    
T  32361288 aaataattagagttttgtaagttggagagagatggacacaaaagatagatggtggatcctactactaagtaggtcccatcatcattaatt 32361377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 52280034 - 52280111
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||| ||||||||  |  ||||||||| |||||||||| |||||||||||||||||||    
T  52280034 ttgcaatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattat 52280111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 12380924 - 12380983
Alignment:
Q  41 agacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattata 12380983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 12384991 - 12385050
Alignment:
Q  41 agacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattata 12385050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 26860056 - 26860122
Alignment:
Q  33 agagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||| |||||||||| | ||||||| |||||||||| |||||| ||||||||||||    
T  26860056 agagagatagacacataaaatagatagtaggtcctatcactaagtggatcccacaatcattaattat 26860122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 30077639 - 30077716
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||||||||||||||||  |  ||||| ||| ||||||||| ||||||| ||||||||||||    
T  30077639 ttgcaatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaattat 30077716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 24413291 - 24413354
Alignment:
Q  36 gagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||||| |||  ||||||||| || ||| |||||||||||||||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaattat 24413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 32887785 - 32887852
Alignment:
Q  32 gagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||| ||||||||||| |||||| ||| ||| |||||||| ||| |||||||||||||||||||||||    
T  32887785 gagaaagatagacacataaaataaatagtggatcctaccattaaatgggtcccaccatcattaattat 32887852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 26372321 - 26372255
Alignment:
Q  33 agagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||  |||||||| ||| | |||||||| |||||||||||||||| ||||||||||    
T  26372321 agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccaccattaattat 26372255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 30860744 - 30860794
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa 52  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  30860744 ttagcaaaatgaatggagttttgcaagttggagagatatagacataaaaaa 30860794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 1228520 - 1228572
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaa-aatagata 58  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  1228520 aaaataaatggagttttgcaatttggagagagacagacacaaaagaatagata 1228572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 6948825 - 6948899
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaataga--taatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| ||||||||||||||||| |||||||| |  |  ||||||||| |||||||||| ||||||||||||||    
T  6948825 ttgcaatttggagagagatagacaaaaaaaatataagtggtgggtcctatcactaagtggatcccaccatcatta 6948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 7845043 - 7844992
Alignment:
Q  47 aaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||||||||||| ||| ||||||||||||||| |||||||||| ||||||||    
T  7845043 aaaaaatagatattggatcctaccactaagtgtgtcccaccattattaatta 7844992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 46608410 - 46608449
Alignment:
Q  60 tgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  46608410 tgggtcctaccactaagtgggacccaccatcattaattat 46608449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 18107316 - 18107389
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| |||||||||||||||||||||||| ||  |  ||||||||| |||||| ||| ||||||||||||||    
T  18107316 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaaatggatcccaccatcatta 18107389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 46045767 - 46045690
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||| ||||||||||||  ||| ||||||||  | ||| |||||| |||||||||  |||||||||||||||||||    
T  46045767 ttgcaacttggagagagatgaacaaaaaaaataagtgatgagtcctatcactaagtgtatcccaccatcattaattat 46045690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 23916129 - 23916089
Alignment:
Q  59 atgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  23916129 atggctcctaccactacgtgggtcccaccatcattaattat 23916089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 32618873 - 32618805
Alignment:
Q  29 ttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||||||||||| |||| | ||| |||||| ||| |||||| | ||||| ||||||||||||||||||||    
T  32618873 ttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtcccaccatcattaatta 32618805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 7241 - 7149
Alignment:
Q  8 aaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | ||||||||| ||||||||||||||||||    
T  7241 aaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaattata 7149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 9179 - 9274
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||||| | ||||||||||||||||||    
T  9179 gcaaaataaatggagatttgcaagttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaattata 9274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 6415 - 6508
Alignment:
Q  7 aaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    |||||||||||  |||||||||||||| ||||| |||||||||||||||||  |||||||||| ||||| ||||| | ||||||||||||||||    
T  6415 aaaataaatgggattttgcaagttggaaagagacagacacaaaaaatagatggtgggtcctacaactaaatgggtacaaccatcattaattata 6508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 22418 - 22515
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattata 100  Q
    ||||||||||||||||||||| |||| ||  | |||||||||||||||||||||||| ||| ||||||||||||||| || |||| || ||||||||||    
T  22418 ttagcaaaataaatggagttt-gcaatttacaaagagatagacacaaaaaatagatagtggatcctaccactaagtgagttccacaataattaattata 22515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 17311 - 17378
Alignment:
Q  32 gagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaattat 99  Q
    |||||||||||||||||||||||  |  ||||||||| ||||||||||||||||||||||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaattat 17378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 58779 - 58684
Alignment:
Q  2 ttagcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    ||||||||||||||||| | | |||| ||||||||||||| ||| | |||||||||| ||| |||||||| ||||||||| ||| ||||||||||||    
T  58779 ttagcaaaataaatggaatat-gcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 58684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 73835 - 73896
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagataatgggtcc 66  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||  |||||||    
T  73835 gcaaaataaatggtgttttgcaagttggagagagatagacgcaaaatatagatggtgggtcc 73896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 4695 - 4768
Alignment:
Q  22 ttgcaagttggagagagatagacacaaaaaa-tagataatgggtcctaccactaagtgggtcccaccatcatta 94  Q
    |||||| |||||||||||||||||||||||| ||  |  ||||||||| |||||||||| ||||||||||||||    
T  4695 ttgcaatttggagagagatagacacaaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 4768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 13666 - 13629
Alignment:
Q  132 atctctccaaattgaagaaatggagaggatcctaaccc 169  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13666 atctctccaaattgaagaaatggagaggatcctaaccc 13629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 13777 - 13730
Alignment:
Q  5 gcaaaataaatggagttttgcaagttggagagagatagacacaaaaaa 52  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  13777 gcaaaataaatagagttttgctagttggagagagatagacaaaaaaaa 13730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 29574 - 29640
Alignment:
Q  32 gagagagatagacacaaaaaatagataatgggtcctaccactaagtgggtcccaccatcattaatta 98  Q
    |||||||||||| ||| ||||||| |||| ||||||| || || ||| ||||||| |||||||||||    
T  29574 gagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcattaatta 29640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University