View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7047_high_4 (Length: 292)
Name: NF7047_high_4
Description: NF7047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7047_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 13307824 - 13307548
Alignment:
| Q |
1 |
catacattgaccaaaataggaagccaaatattacaaataggactctgtgaaaccaaggtgaaaatagcgagaaagtttgtcctaactccttcctaagtga |
100 |
Q |
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| T |
13307824 |
catacattgaccaaaataggaagccaaatattacaaataggactttgtgaaaccaaggtgaaaatagcgagaaagtttgtcctaactccttcctaagtga |
13307725 |
T |
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| Q |
101 |
acaaaacaaacctaatcttcaaccgtgtggtacgtattacgtttgtctatatgtttttgcttgattcaaatattgtatacctatgacgaataagagatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
13307724 |
acaaaacaaacctaatcttcaaccgtgtggtacgtattacgtttgtctatatgtttttgcttgattcaaatattgtatacctatgatgaataagagatta |
13307625 |
T |
|
| Q |
201 |
ataaacgatggtgttttcgatgaataagaagaactaatgagacggaagaattattgataatgtgaccaagtaaatga |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
13307624 |
ataaacgatggtgttttcgatgaataagaagaactaatgagaaggaagaattattgataatgtgaccaagtaaatga |
13307548 |
T |
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