View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7049_high_6 (Length: 256)
Name: NF7049_high_6
Description: NF7049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7049_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 25 - 245
Target Start/End: Complemental strand, 46301166 - 46300946
Alignment:
| Q |
25 |
caggcgtttggcgtgaagtgtaaggtaaagacagaagaatgtgtaatgaagagagagaaatagtgaaacggcggtgaaacgacgtttgatgagtgtcact |
124 |
Q |
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| T |
46301166 |
caggcgtttggcgtgaagtgtaaggtaaacacagaagaatgtgtaatgaagagagagaaatagtgaaacggcggtgaaacgacgtttgatgagtgtcact |
46301067 |
T |
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| Q |
125 |
gtgttatactggatgttctcgccgtcatttcccactgttatttatctctcacgcgccttcactcgcattctgtaaatatcgtttttatccctatgcctat |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
46301066 |
gtgttatactggatgttctcgccgtcatttcccactgttatttatctctcacgcaccttcactcgcatgctgtaaatatcgtttttatccctatgcctat |
46300967 |
T |
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| Q |
225 |
gtagctatctttctgattcat |
245 |
Q |
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||||||||||||||||||||| |
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| T |
46300966 |
gtagctatctttctgattcat |
46300946 |
T |
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