View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7049_low_2 (Length: 368)
Name: NF7049_low_2
Description: NF7049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7049_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 7676938 - 7676591
Alignment:
| Q |
1 |
ctagaagtgggaaatcttctactttaacttcgtagctatttttatattttagtcgagcaggtgtgaaaacattataaattacataaaacaagatttgaac |
100 |
Q |
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| T |
7676938 |
ctagaagtgggaaatcttctactttaacttcgtagctatttttatattttagtcgagcaggggtgaaaaaattataaattacataaaacaagatttgaac |
7676839 |
T |
|
| Q |
101 |
acaaatttccatctccatacaccacaaaattgagcattttaccaactatgatgtgctatttgacagcttatataagtttttatgtacgttgttcactaat |
200 |
Q |
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| T |
7676838 |
acaaatttccatctccatacaccacaaaattgagcattttaccaactatgatgtgctatttgacagct--tataagtttttatgtacgttgttcactaat |
7676741 |
T |
|
| Q |
201 |
actaaatattcaattacttccaatatctttttaaccatnnnnnnncaacatgtctaatttgggacataaattatcataaaacaaaatgttattttaaggt |
300 |
Q |
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| T |
7676740 |
actaaatattcaattacttccaatatctttttaaccataaaaa---aacatgtctagtttgggacataaattatcataaaactaaatgttattttaaggt |
7676644 |
T |
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| Q |
301 |
ctaataatttagactaccttatagttagttatacttataaatactttgtaact |
353 |
Q |
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| T |
7676643 |
ctaataatttagactaccttatagttagttatacttataaatactttgtaact |
7676591 |
T |
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