View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7050_high_6 (Length: 232)
Name: NF7050_high_6
Description: NF7050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7050_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 44 - 227
Target Start/End: Original strand, 21120659 - 21120842
Alignment:
| Q |
44 |
gtaagtggttatagtgttgagtttatgcaaagacgaaacaaatgaaattatccataaattagctaaggttgtttaaacaattttatacaaattatagtgt |
143 |
Q |
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| T |
21120659 |
gtaagtggttatagtgttgagtttatgcaaagacgaaacaaatgaaattatccataaattagctaaggttgtttaaacaattttatacaaattatagtgt |
21120758 |
T |
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| Q |
144 |
tgagtttctgcaaagacaacaattgaaattgtccataaactagttaagacagttaatttttattttattttaagctaaattagc |
227 |
Q |
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| T |
21120759 |
tgagtttctgcaaagacaacaattgaaattgtccataaactagttaagacagttaatttttattttattttaagctaaattagc |
21120842 |
T |
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