View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7051_high_13 (Length: 249)

Name: NF7051_high_13
Description: NF7051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7051_high_13
NF7051_high_13
[»] chr5 (16 HSPs)
chr5 (18-249)||(8529019-8529250)
chr5 (31-249)||(8535590-8535814)
chr5 (30-249)||(1600093-1600316)
chr5 (31-249)||(9074519-9074740)
chr5 (41-249)||(2856683-2856897)
chr5 (41-249)||(2874293-2874507)
chr5 (28-114)||(8636953-8637039)
chr5 (41-249)||(2844856-2845070)
chr5 (43-108)||(2904938-2905003)
chr5 (46-247)||(8641475-8641691)
chr5 (28-114)||(8644298-8644384)
chr5 (46-114)||(8677918-8677986)
chr5 (43-173)||(8547984-8548108)
chr5 (200-249)||(2904799-2904848)
chr5 (212-247)||(8637140-8637175)
chr5 (212-249)||(8644485-8644522)
[»] chr4 (1 HSPs)
chr4 (18-249)||(9443180-9443411)
[»] chr7 (2 HSPs)
chr7 (31-249)||(48361645-48361869)
chr7 (35-242)||(35779921-35780119)
[»] chr1 (2 HSPs)
chr1 (31-120)||(26324198-26324287)
chr1 (131-249)||(5130959-5131080)
[»] chr6 (1 HSPs)
chr6 (43-173)||(16716447-16716577)
[»] scaffold0627 (1 HSPs)
scaffold0627 (30-173)||(4735-4878)


Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 8529019 - 8529250
Alignment:
Q  18 ggaacacgatccaaaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8529019 ggaacacgatccaaaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattag 8529118  T
Q  118 atataaaggtcggatcacaaatgtatagaaatccctttaattctcccatgctaataggcctacaacaaaaaacattatgatttccaaacacatgtggagg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8529119 atataaaggtcggatcacaaatgtatagaaatccctttaattctcccatgctaataggcctacaacaaaaaacattatgatttccaaacacatgtggagg 8529218  T
Q  218 agaaggaaatgactgcaacctctcattttcaa 249  Q
    ||||||||| ||||||||||||||||||||||    
T  8529219 agaaggaaacgactgcaacctctcattttcaa 8529250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 31 - 249
Target Start/End: Original strand, 8535590 - 8535814
Alignment:
Q  31 aaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcgg 130  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||     
T  8535590 aaggattgaatgaagtatcaatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacatcagataaaaaggtcga 8535689  T
Q  131 atcacaaatgtatagaaatccctttaattctcccatgctaataggcctacaacaaaaaa------cattatgatttccaaacacatgtggaggagaagga 224  Q
    |||||||||||| |||||||||||||||||||||||||||||| | |||  || || ||       |||||||||||||||||  |||||||||||||||    
T  8535690 atcacaaatgtaaagaaatccctttaattctcccatgctaatatgtctattactaagaaatccattattatgatttccaaacatctgtggaggagaagga 8535789  T
Q  225 aatgactgcaacctctcattttcaa 249  Q
    ||||||| || | ||||| ||||||    
T  8535790 aatgacttcagcgtctcactttcaa 8535814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 30 - 249
Target Start/End: Complemental strand, 1600316 - 1600093
Alignment:
Q  30 aaaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcg 129  Q
    ||||||||||| |||||||||   ||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| ||||| ||||| |||||| |    
T  1600316 aaaggattgaatgaagtatcgtacttgtaaaccttagtccatgattcttcaatgccatattccttcataacccacattggaacatcagataaaaaggtag 1600217  T
Q  130 gatcacaaatgtatagaaatccctttaattctcccatgctaataggcc---tacaacaa---aaaacattatgatttccaaacacatgtggaggagaagg 223  Q
      ||||||||||| |||||||||||||||||||||||||||| | | |   ||| ||||     |  |||||||||||||||| ||||||||||||||||    
T  1600216 --tcacaaatgtaaagaaatccctttaattctcccatgctaacatggctgttaccacaagttccattattatgatttccaaactcatgtggaggagaagg 1600119  T
Q  224 aaatgactgcaacctctcattttcaa 249  Q
    ||||||||||||||||||| ||||||    
T  1600118 aaatgactgcaacctctcactttcaa 1600093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 249
Target Start/End: Complemental strand, 9074740 - 9074519
Alignment:
Q  31 aaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcgg 130  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||| |||| |||||||||||||||||||||| |||||||| ||||| ||| |||      
T  9074740 aaggattgaacgaagtatcaatgttgtaaactttagtccatgattcttcaataccatattcattcataacccacactgaaacatcagataaaaatgtcca 9074641  T
Q  131 atcacaaatgtatagaaatccctttaattctcccatgcta-ataggcctacaacaa--aaaacattatgatttccaaacacatgtggaggagaaggaaat 227  Q
     ||||||||||| |||||||||||||||||||||||| ||  |  |    ||||||    |  |||||| |||||||||||||| |||||||||||||||    
T  9074640 gtcacaaatgtaaagaaatccctttaattctcccatgatatgtctgttatcaacaattccactattatggtttccaaacacatgcggaggagaaggaaat 9074541  T
Q  228 gactgcaacctctcattttcaa 249  Q
    ||||||||||||||| ||||||    
T  9074540 gactgcaacctctcactttcaa 9074519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 41 - 249
Target Start/End: Complemental strand, 2856897 - 2856683
Alignment:
Q  41 cgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcggatcacaaatg 140  Q
    ||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||    | | | |    || |||||||    
T  2856897 cgaagtatcaatgttgtaaacaatagtccatgattctccaatgccatattcattcataacccacattgtaacattctcgagagacgatctatgacaaatg 2856798  T
Q  141 tatagaaatccctttaattctcccatgctaataggc---ctacaacaaaaaacatt---atgatttccaaacacatgtggaggagaaggaaatgactgca 234  Q
    || ||||||||||| ||||||||||  |||||||||   |||     |||  ||||   ||||||||||||||||||||||||||||||||| |||||||    
T  2856797 taaagaaatcccttcaattctcccaatctaataggcatgctatggggaaatccattatcatgatttccaaacacatgtggaggagaaggaaacgactgca 2856698  T
Q  235 acctctcattttcaa 249  Q
    |||||||| ||||||    
T  2856697 acctctcactttcaa 2856683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 41 - 249
Target Start/End: Complemental strand, 2874507 - 2874293
Alignment:
Q  41 cgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcggatcacaaatg 140  Q
    ||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||    | | | |    || |||||||    
T  2874507 cgaagtatcaatgttgtaaacaatagtccatgattctccaatgccatattcattcataacccacattgtaacattctcgagagacgatctatgacaaatg 2874408  T
Q  141 tatagaaatccctttaattctcccatgctaataggc---ctacaacaaaaaacatt---atgatttccaaacacatgtggaggagaaggaaatgactgca 234  Q
    || ||||||||||| ||||||||||  |||||||||   |||     |||  ||||   ||||||||||||||||||||||||||||||||| |||||||    
T  2874407 taaagaaatcccttcaattctcccaatctaataggcatgctatggggaaatccattatcatgatttccaaacacatgtggaggagaaggaaacgactgca 2874308  T
Q  235 acctctcattttcaa 249  Q
    |||||||| ||||||    
T  2874307 acctctcactttcaa 2874293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 8636953 - 8637039
Alignment:
Q  28 ccaaaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacat 114  Q
    |||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8636953 ccaaaggactgaccaaagtatcgatgttgtaaaccttagtccatgattctccaatgccatattcattcataacccacattgcaacat 8637039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 249
Target Start/End: Complemental strand, 2845070 - 2844856
Alignment:
Q  41 cgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcggatcacaaatg 140  Q
    ||||||||| ||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||    | | | |    || |||||||    
T  2845070 cgaagtatcaatgctgtaaacaatagtccatgattctccaatgccatattcattcataacccacattgtaacattctcaagagacgatatatgacaaatg 2844971  T
Q  141 tatagaaatccctttaattctcccatgctaataggc---ctacaacaaaaaacatt---atgatttccaaacacatgtggaggagaaggaaatgactgca 234  Q
    || ||||||||||| ||||||||||  |||||||||   |||     |||  ||||   ||||||||||||||||||||||||||||||||| |||||||    
T  2844970 taaagaaatcccttcaattctcccaatctaataggcatgctaaggggaaatccattatcatgatttccaaacacatgtggaggagaaggaaacgactgca 2844871  T
Q  235 acctctcattttcaa 249  Q
    |||||||| ||||||    
T  2844870 acctctcactttcaa 2844856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 2905003 - 2904938
Alignment:
Q  43 aagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattg 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2905003 aagtatcaatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattg 2904938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 247
Target Start/End: Original strand, 8641475 - 8641691
Alignment:
Q  46 tatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcg------gatcacaaat 139  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||  |||| | | | ||||||||      ||||||||||    
T  8641475 tatcaatgttgtaagccttagtccatgattctccaatgccatattcattcataacccacactgtgacatcaaagaaaaaggtcgagtcacgatcacaaat 8641574  T
Q  140 gtatagaaatccctttaattctcccatgctaataggcctacaacaaaaaa---------cattatgatttccaaacacatgtggaggagaaggaaatgac 230  Q
    |||  ||||||||||||| ||||||||||||||| ||||   || |  ||          ||||||||||||||||||||||||||||||||||||| ||    
T  8641575 gtaaggaaatccctttaactctcccatgctaataagcctgttaccatgaattccattattattatgatttccaaacacatgtggaggagaaggaaataac 8641674  T
Q  231 tgcaacctctcattttc 247  Q
    | ||| |||||| ||||    
T  8641675 ttcaatctctcactttc 8641691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 8644298 - 8644384
Alignment:
Q  28 ccaaaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacat 114  Q
    |||||||| ||| | ||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  8644298 ccaaaggactgatcaaagtatcaatgttgtaaaccttagtccatgattctccaatgtcatattcattcataacccacattgcaacat 8644384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 8677918 - 8677986
Alignment:
Q  46 tatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacat 114  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  8677918 tatcaatgttgtaaaccttagtccatgattctccaatgccatattcattcatatcccacattgcaacat 8677986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 8548108 - 8547984
Alignment:
Q  43 aagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcggatcacaaatgta 142  Q
    ||||||| |||| |||||||||||||||||| ||||||      ||||| |||||||||||||||| ||||| ||| | | || ||   |||||||||||    
T  8548108 aagtatcaatgtggtaaatcttagtccatgactctcca------tattcgttcataacccacattgtaacataagagagatagttccagtcacaaatgta 8548015  T
Q  143 tagaaatccctttaattctcccatgctaata 173  Q
     ||| |||||||||||||||||| |||||||    
T  8548014 aagacatccctttaattctcccaagctaata 8547984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 2904848 - 2904799
Alignment:
Q  200 tccaaacacatgtggaggagaaggaaatgactgcaacctctcattttcaa 249  Q
    |||||||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  2904848 tccaaacatatgtggaggagaaggaaatgattgcatcctctcactttcaa 2904799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 247
Target Start/End: Original strand, 8637140 - 8637175
Alignment:
Q  212 tggaggagaaggaaatgactgcaacctctcattttc 247  Q
    |||||||||||||||||| |||||||||||||||||    
T  8637140 tggaggagaaggaaatgattgcaacctctcattttc 8637175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 8644485 - 8644522
Alignment:
Q  212 tggaggagaaggaaatgactgcaacctctcattttcaa 249  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  8644485 tggaggagaaggaaatgattgcaacctctcactttcaa 8644522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 9443180 - 9443411
Alignment:
Q  18 ggaacacgatccaaaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9443180 ggaacacgatccaaaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattag 9443279  T
Q  118 atataaaggtcggatcacaaatgtatagaaatccctttaattctcccatgctaataggcctacaacaaaaaacattatgatttccaaacacatgtggagg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  9443280 atataaaggtcggatcacaaatgtatagaaatccctttaattctcccatgctaataggcctactacaataaacattatgatttccaaacacatgtggagg 9443379  T
Q  218 agaaggaaatgactgcaacctctcattttcaa 249  Q
    ||||||||||||||||||||||||| ||||||    
T  9443380 agaaggaaatgactgcaacctctcactttcaa 9443411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 31 - 249
Target Start/End: Complemental strand, 48361869 - 48361645
Alignment:
Q  31 aaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcgg 130  Q
    |||||||||||| ||||| ||||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||||  ||||||||     
T  48361869 aaggattgaacgcagtattgatgttgtaaaccttagtctatgattcttcaataccatattcattcataacccacattgaaacatcagatgcaaaggtcga 48361770  T
Q  131 atcacaaatgtatagaaatccctttaattctcccatgctaataggcctacaacaaaaaa------cattatgatttccaaacacatgtggaggagaagga 224  Q
     ||||||||||| |||||||||||||||||||||||||||||| ||||   || || ||       ||||||||||||||||||||||||||||||||||    
T  48361769 gtcacaaatgtaaagaaatccctttaattctcccatgctaatatgcctgttaccaagaattccattattatgatttccaaacacatgtggaggagaagga 48361670  T
Q  225 aatgactgcaacctctcattttcaa 249  Q
    |||||||||| ||||||| ||||||    
T  48361669 aatgactgcaccctctcactttcaa 48361645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 242
Target Start/End: Original strand, 35779921 - 35780119
Alignment:
Q  35 attgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcggatca 134  Q
    ||||| |||||| || |||||||||| ||||||||| |||||| |||||||||  ||||||||||||||||||| ||||| |   | |||  ||   |||    
T  35779921 attgaccgaagtctcaatgttgtaaaccttagtccacgattcttcaatgccatgctcattcataacccacattgtaacatcaacaaaaaaattcaagtca 35780020  T
Q  135 caaatgtatagaaatccctttaattctcccatgctaataggcctacaacaaaaaacattatgatttccaaacacatgtggaggagaaggaaatgactgca 234  Q
    |||||||| |||||||||||||||||||||||||||||| ||||         |  || |||| |||||||||||||||||||||||||||||| |||||    
T  35780021 caaatgtaaagaaatccctttaattctcccatgctaatacgcct---------attatcatgaattccaaacacatgtggaggagaaggaaatggctgca 35780111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 26324287 - 26324198
Alignment:
Q  31 aaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagata 120  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  26324287 aaggattgaacgaagcatcgatgttgtaaatcttagtccatgattctccagtgccatattcattcataacccacattgaaacatcagata 26324198  T

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Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 249
Target Start/End: Original strand, 5130959 - 5131080
Alignment:
Q  131 atcacaaatgtatagaaatccctttaattctcccatgctaataggcc---tacaacaaaaaacattatgatttccaaacacatgtggaggagaaggaaat 227  Q
    |||| ||||||| |||||||||||||||||||||||||  ||| ||    | | | ||||| ||||||||||| ||||||| |||||||||||||| |||    
T  5130959 atcagaaatgtaaagaaatccctttaattctcccatgccgatatgctcggtgccataaaaatcattatgattttcaaacacgtgtggaggagaagggaat 5131058  T
Q  228 gactgcaacctctcattttcaa 249  Q
    || ||||| |||||| ||||||    
T  5131059 gattgcaatctctcactttcaa 5131080  T

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Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 16716447 - 16716577
Alignment:
Q  43 aagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcggatcacaaatgta 142  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||     |  ||| | |  ||| |||||||    
T  16716447 aagtatcaatgtggtaaaccttagtccatgattctccaatgccatattcattcataacccacattgtaacatattcgaagaagtttgagtcagaaatgta 16716546  T
Q  143 tagaaatccctttaattctcccatgctaata 173  Q
    |||||||||||||||||||||||||||||||    
T  16716547 tagaaatccctttaattctcccatgctaata 16716577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 4735 - 4878
Alignment:
Q  30 aaaggattgaacgaagtatcgatgttgtaaatcttagtccatgattctccaatgccatattcattcataacccacattgaaacattagatataaaggtcg 129  Q
    ||||||||| || ||||||  |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||    ||   || | |    
T  4735 aaaggattgtacaaagtattaatgtggtaaaccttagtccatgattcaccaatgccatattcattcataacccacattgtaacatattttaaggagtttg 4834  T
Q  130 gatcacaaatgtatagaaatccctttaattctcccatgctaata 173  Q
      ||||||||||| ||||||||||||||||||||||||||||||    
T  4835 agtcacaaatgtaaagaaatccctttaattctcccatgctaata 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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