View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7052_high_2 (Length: 338)
Name: NF7052_high_2
Description: NF7052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7052_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 326
Target Start/End: Complemental strand, 2818747 - 2818427
Alignment:
| Q |
9 |
gaagaatattaaaggggttatggaccctagtagctgcattctgaatcttaacacaatttggtatatgttgatcaatgatcatctaagtatatatattgta |
108 |
Q |
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| T |
2818747 |
gaagaaaattaaatgggttatggaccctagtagctgcattctgaatcttaacacaatttggtatatgttgatcaatgatcatctaagtatatatattgta |
2818648 |
T |
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| Q |
109 |
tatgaggattacagagtaaataatagtttgttcttcaattgcacttcaagattcaacgagaataatctttacggaaaaggaaaaataatgaaga---tca |
205 |
Q |
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| T |
2818647 |
tatgaggagtaaagagtaaataatagtttgttcttcaattgcacttcaagattcaacgagaataatctttacggaaaaggaaaaataatgaagatgttga |
2818548 |
T |
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| Q |
206 |
gctttaagcattatgtcttcacttgaaggagagcaataaacaatagagttatagagaggtttacacgtgcacactaagtgagaacgatgaaaacgtttga |
305 |
Q |
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| T |
2818547 |
gctttaagcattatgtcttcacttgaaggagagcaataaataatagagttatagagaggtttacacgtgcacactaagggagaacgatgaaaacgtttga |
2818448 |
T |
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| Q |
306 |
gtggttaatgttattgttgat |
326 |
Q |
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||||||||||||||||||||| |
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| T |
2818447 |
gtggttaatgttattgttgat |
2818427 |
T |
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