View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7052_high_3 (Length: 223)
Name: NF7052_high_3
Description: NF7052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7052_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 37662015 - 37662204
Alignment:
| Q |
18 |
aatcctcccctcaagaaatccctccacaaactcacacactctcaacaaacgcaacagaagcactcaaaaaacaaggttttgttcttatggctgatcttct |
117 |
Q |
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| T |
37662015 |
aatcctcgcctgaagtaatcccatcacaaactcacacactctcaacaaacgcaacagaagcactcaaaaaacaaggttttgttcttatggctgatcttct |
37662114 |
T |
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| Q |
118 |
tcatcgttcaccaccattctttcttccacctaaaaactcaactttctttgccatcaaagattctgctatcaaaaacacctcactccctct |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37662115 |
tcatcgttcaccaccattctttcttccacctaaaaactcaactttctttgccatcaaagattctgctatcaaaaacacctcactccctct |
37662204 |
T |
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