View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7053_high_6 (Length: 366)
Name: NF7053_high_6
Description: NF7053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7053_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 15 - 349
Target Start/End: Original strand, 42899324 - 42899667
Alignment:
| Q |
15 |
catcacagtccatgatgagtgggacccaccaacagggtcacgtgtctattgttgactctgccaccaacaacatgataaactcaaatggtaattttagttt |
114 |
Q |
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| T |
42899324 |
catcacagtccatgatgagtgggacccaccaacagggtcacgtgtctattgttgactctgccaccaacaacatgataaactcaaatggtaattttagttt |
42899423 |
T |
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| Q |
115 |
gaatttgtcctcatgtgaagaccaaatgataaacaactctttctcttcttctggatttcatggaacttcttttgaggatacttttgctggaaatattctt |
214 |
Q |
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| T |
42899424 |
gaatttgtcctcatgtgaagaccaaatgataaacaactctttctcttcttctggatttcatggaacttcttttgaggatacttttgctggaaatattctt |
42899523 |
T |
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| Q |
215 |
cattcaaatcaagatcataatatcaatcatgatggtgataatgatattacaaaaacaaccaccaatgatgacga---------tggaggaaacaatgcat |
305 |
Q |
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| T |
42899524 |
cattcaaatcaagatcataatatcaatcatgatggtgataatgatattccaaaaacaaccaccaatgatgacgatgttgccgctggaggaaacaatgcat |
42899623 |
T |
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| Q |
306 |
ttacaagagatttcttaggtcttaaaccactctctgatagtgat |
349 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42899624 |
ttacaagagatttcttaggtcttaaaccactctctgatagtgat |
42899667 |
T |
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