View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7053_low_20 (Length: 301)

Name: NF7053_low_20
Description: NF7053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7053_low_20
NF7053_low_20
[»] chr7 (14 HSPs)
chr7 (10-294)||(4828947-4829231)
chr7 (178-244)||(24596843-24596909)
chr7 (202-255)||(29544718-29544771)
chr7 (202-255)||(20017151-20017204)
chr7 (203-242)||(7815534-7815573)
chr7 (204-255)||(21545692-21545743)
chr7 (202-255)||(22067666-22067719)
chr7 (202-242)||(315384-315424)
chr7 (166-242)||(18496776-18496852)
chr7 (204-263)||(7372434-7372492)
chr7 (198-263)||(30405783-30405849)
chr7 (198-255)||(8308895-8308952)
chr7 (202-239)||(23125115-23125152)
chr7 (203-255)||(20470674-20470726)
[»] chr3 (13 HSPs)
chr3 (165-255)||(19542950-19543040)
chr3 (165-254)||(18474369-18474458)
chr3 (202-255)||(25883301-25883354)
chr3 (199-255)||(19219071-19219127)
chr3 (220-263)||(28422642-28422685)
chr3 (198-255)||(5632402-5632459)
chr3 (202-249)||(18066001-18066048)
chr3 (204-239)||(19263769-19263804)
chr3 (202-255)||(1475143-1475196)
chr3 (202-255)||(10341985-10342038)
chr3 (222-255)||(11475045-11475078)
chr3 (201-245)||(8402413-8402457)
chr3 (202-242)||(11521376-11521416)
[»] chr5 (10 HSPs)
chr5 (166-255)||(19763713-19763802)
chr5 (202-254)||(26329933-26329985)
chr5 (199-255)||(7742730-7742786)
chr5 (203-243)||(16622541-16622581)
chr5 (199-263)||(18872912-18872976)
chr5 (204-266)||(19331696-19331759)
chr5 (180-255)||(22643746-22643821)
chr5 (202-255)||(17027725-17027778)
chr5 (204-236)||(18452677-18452709)
chr5 (203-239)||(30072330-30072366)
[»] scaffold0011 (1 HSPs)
scaffold0011 (199-255)||(228047-228103)
[»] chr1 (18 HSPs)
chr1 (180-255)||(26854161-26854236)
chr1 (198-254)||(52271104-52271160)
chr1 (199-262)||(23505947-23506010)
chr1 (202-255)||(11769857-11769910)
chr1 (198-255)||(19257665-19257722)
chr1 (202-255)||(30675682-30675735)
chr1 (207-255)||(25494357-25494405)
chr1 (165-255)||(21548846-21548936)
chr1 (202-255)||(12423778-12423831)
chr1 (202-243)||(23223624-23223665)
chr1 (198-243)||(25126690-25126735)
chr1 (202-243)||(26657686-26657727)
chr1 (199-255)||(15298731-15298786)
chr1 (202-242)||(30781971-30782011)
chr1 (198-245)||(25665629-25665676)
chr1 (202-255)||(9328365-9328418)
chr1 (202-255)||(23519632-23519685)
chr1 (202-242)||(50047386-50047426)
[»] scaffold0337 (1 HSPs)
scaffold0337 (163-253)||(2008-2098)
[»] scaffold0065 (1 HSPs)
scaffold0065 (163-253)||(12444-12534)
[»] chr4 (15 HSPs)
chr4 (198-255)||(31859760-31859817)
chr4 (199-255)||(17187371-17187427)
chr4 (179-255)||(21077431-21077507)
chr4 (198-253)||(23353818-23353873)
chr4 (202-255)||(1695710-1695763)
chr4 (202-255)||(15192401-15192454)
chr4 (202-243)||(17026560-17026601)
chr4 (198-255)||(33519228-33519285)
chr4 (198-240)||(29437674-29437716)
chr4 (202-243)||(18898192-18898233)
chr4 (202-255)||(34864159-34864212)
chr4 (202-255)||(47024629-47024682)
chr4 (202-255)||(51884800-51884853)
chr4 (207-255)||(5906631-5906679)
chr4 (199-243)||(19602008-19602052)
[»] chr8 (17 HSPs)
chr8 (119-245)||(30543970-30544095)
chr8 (200-255)||(11437618-11437673)
chr8 (202-255)||(16052140-16052193)
chr8 (178-236)||(12357696-12357754)
chr8 (178-236)||(12358824-12358882)
chr8 (202-255)||(16054492-16054545)
chr8 (198-243)||(22894391-22894436)
chr8 (198-255)||(27097661-27097718)
chr8 (199-255)||(28291961-28292017)
chr8 (204-255)||(13081800-13081851)
chr8 (206-241)||(28901217-28901252)
chr8 (198-245)||(31436678-31436724)
chr8 (202-255)||(11310120-11310172)
chr8 (222-255)||(13583403-13583436)
chr8 (202-255)||(28902287-28902340)
chr8 (198-239)||(32239502-32239543)
chr8 (199-243)||(30850960-30851004)
[»] chr6 (7 HSPs)
chr6 (163-253)||(24507267-24507357)
chr6 (202-255)||(15575122-15575175)
chr6 (202-255)||(17860312-17860365)
chr6 (198-255)||(26499706-26499763)
chr6 (203-255)||(30355515-30355567)
chr6 (202-255)||(15998708-15998761)
chr6 (156-252)||(14768093-14768189)
[»] chr2 (11 HSPs)
chr2 (199-255)||(18818900-18818956)
chr2 (198-253)||(34063700-34063755)
chr2 (202-255)||(16593614-16593667)
chr2 (166-255)||(18236130-18236219)
chr2 (198-255)||(22525679-22525736)
chr2 (198-243)||(27417122-27417167)
chr2 (203-255)||(17415028-17415080)
chr2 (203-255)||(30998969-30999021)
chr2 (198-257)||(24188165-24188224)
chr2 (198-255)||(14921898-14921955)
chr2 (202-255)||(25474235-25474288)
[»] scaffold0190 (1 HSPs)
scaffold0190 (205-255)||(11564-11614)
[»] scaffold1149 (1 HSPs)
scaffold1149 (200-243)||(1997-2040)
[»] scaffold0836 (1 HSPs)
scaffold0836 (198-258)||(2803-2863)
[»] scaffold0188 (1 HSPs)
scaffold0188 (203-242)||(26819-26858)
[»] scaffold0282 (1 HSPs)
scaffold0282 (202-252)||(22477-22527)
[»] scaffold0362 (1 HSPs)
scaffold0362 (202-255)||(7817-7870)
[»] scaffold0185 (1 HSPs)
scaffold0185 (199-244)||(2709-2754)
[»] scaffold0043 (1 HSPs)
scaffold0043 (164-245)||(58958-59038)


Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 10 - 294
Target Start/End: Complemental strand, 4829231 - 4828947
Alignment:
Q  10 atggacatcaaggccgtgtccatacgtgaggcacatggtttggtgcgtaggggcacgtggggaagtaggcaatattatcccatgtgaagggtgtgtggct 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  4829231 atggacatcaaggccgtgtccatacgtgaggcacatggtttggtgcgtaggggcacatggggaagtagacaatattatcccatgtgaagggtgggtggct 4829132  T
Q  110 ttatccgcaggggctcatgaggcactcccctcatgtgcgattttagcagcttacgaccctttttcggccattctttcatcttttaatcccttggaacttg 209  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4829131 ttatccgcagaggctcatgaggcactcccctcatgtgcgatttcagcagcttacgaccctttttcggccgttctttcatcttttaatcccttggaacttg 4829032  T
Q  210 aaatgaattatcttcactttgtattgtcttcaaataacttctaagatcattgaattttcgtcttcttatcttcgctccttcgtgt 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||    
T  4829031 aaatgaattatcttcactttgtattgtcttcaaataacttctaagatcattgaattttcgtcttcttatcctcgatccgtcgtgt 4828947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 24596843 - 24596909
Alignment:
Q  178 cattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaat 244  Q
    ||||||||| ||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  24596843 cattctttcgtcttgcaatgccttggaacttcaaatgaattttcttcactttgtattgtcttcaaat 24596909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 29544771 - 29544718
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  29544771 ggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaaga 29544718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 20017204 - 20017151
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||||||    
T  20017204 ggaacttgaaatgaattttcttcactttgtattgtcttcaagaaccttctaaga 20017151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 7815573 - 7815534
Alignment:
Q  203 gaacttgaaatgaattatcttcactttgtattgtcttcaa 242  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  7815573 gaacttgaaatgaattttcttcactttgtattgtcttcaa 7815534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 21545692 - 21545743
Alignment:
Q  204 aacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||| |||||||||| |||||||||||||||  ||||||||    
T  21545692 aacttgaaatgaattttcttcactttttattgtcttcaaatactttctaaga 21545743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 22067666 - 22067719
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| | |||||||||||||||||||||  | |||||||||    
T  22067666 ggaacttgaaatgaattcttttcactttgtattgtcttcaacaaccttctaaga 22067719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 315424 - 315384
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 242  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  315424 ggaacttgaaatgaattttattcactttgtattgtcttcaa 315384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 18496852 - 18496776
Alignment:
Q  166 ccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaa 242  Q
    |||||||||| || ||||| | ||||  ||| ||||||||||||||||||||| ||||||  ||||||| |||||||    
T  18496852 ccctttttcgaccgttcttacgtcttgaaatgccttggaacttgaaatgaattttcttcatcttgtattttcttcaa 18496776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 7372434 - 7372492
Alignment:
Q  204 aacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaagatcattgaa 263  Q
    |||||||||| |||| ||||||||| |||||||||| ||| | |||||||||||||||||    
T  7372434 aacttgaaataaattttcttcactt-gtattgtctttaaaaatcttctaagatcattgaa 7372492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 30405849 - 30405783
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaag-atcattgaa 263  Q
    |||||||| || ||| ||||| | ||||||||||||||| |||||||| |||||||| |||||||||    
T  30405849 ccttggaatttcaaacgaattgtattcactttgtattgtattcaaataccttctaagaatcattgaa 30405783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 8308895 - 8308952
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||| ||||||  |||| | ||||||||||||||||| | |||||||||    
T  8308895 ccttggaacttgatatgaatcttctttattttgtattgtcttcaaagaccttctaaga 8308952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 23125152 - 23125115
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtctt 239  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  23125152 ggaatttgaaatgaattttcttcactttgtattgtctt 23125115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 20470674 - 20470726
Alignment:
Q  203 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||| |||| |||||| ||||||||||||||||  | |||||||||    
T  20470674 gaacttgaaatcaattttcttcattttgtattgtcttcaagaaccttctaaga 20470726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 255
Target Start/End: Original strand, 19542950 - 19543040
Alignment:
Q  165 accctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||  |  |||||| ||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  19542950 accctttttcgctctatctttcgtcttgcaatgccttggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaaga 19543040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 18474458 - 18474369
Alignment:
Q  165 accctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaag 254  Q
    |||||||||||  | ||||||| ||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  18474458 accctttttcgctcgttctttcgtcttgcaatgcattggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaag 18474369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 25883354 - 25883301
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||||||    
T  25883354 ggaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctaaga 25883301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 19219071 - 19219127
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||| |||||||||||| | |||||||||||||||||||||| | |||||||||    
T  19219071 cttggaatttgaaatgaattttattcactttgtattgtcttcaaaaaccttctaaga 19219127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 28422685 - 28422642
Alignment:
Q  220 tcttcactttgtattgtcttcaaataacttctaagatcattgaa 263  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  28422685 tcttcactttgtattgtcttcaaataccttctaacatcattgaa 28422642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 5632402 - 5632459
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||||||| |||||| ||| |||| |||||||||| ||| |||||    
T  5632402 ccttggaacttgaaatgaattttcttcaatttttattatcttcaaataccttataaga 5632459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 18066048 - 18066001
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataactt 249  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  18066048 ggaagttgaaatgaattttcttcactttgtattttcttcaaaaaactt 18066001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 19263769 - 19263804
Alignment:
Q  204 aacttgaaatgaattatcttcactttgtattgtctt 239  Q
    ||||||||||||||| ||||||||||||||||||||    
T  19263769 aacttgaaatgaattttcttcactttgtattgtctt 19263804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 1475143 - 1475196
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||| |||| ||||||||||||||| |||||||  | |||||||||    
T  1475143 ggaacttgaaataaattttcttcactttgtattatcttcaataaccttctaaga 1475196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 10342038 - 10341985
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||| || |  ||||||||||||||||||||| | |||||||||    
T  10342038 ggaacttgaaatgagtttttctcactttgtattgtcttcaaaaaccttctaaga 10341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 255
Target Start/End: Complemental strand, 11475078 - 11475045
Alignment:
Q  222 ttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||||||||||| |||||||||    
T  11475078 ttcactttgtattgtcttcaaatatcttctaaga 11475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 8402413 - 8402457
Alignment:
Q  201 tggaacttgaaatgaattatcttcactttgtattgtcttcaaata 245  Q
    |||||||||||||||||  |||||||||| |||| ||||||||||    
T  8402413 tggaacttgaaatgaatgttcttcactttatattttcttcaaata 8402457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 11521416 - 11521376
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 242  Q
    ||||||||||||||||| ||||| ||||||||| |||||||    
T  11521416 ggaacttgaaatgaattttcttcgctttgtattatcttcaa 11521376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 19763713 - 19763802
Alignment:
Q  166 ccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||  | ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||||||| | |||||||||    
T  19763713 ccctttttcgagcgttcttccatctttcaatcctttggaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaaga 19763802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 26329933 - 26329985
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaag 254  Q
    ||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  26329933 ggaacttgaaatgaattttcttcactttgtattgtcttaaaaaaccttctaag 26329985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 7742730 - 7742786
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||| ||||||||| || || |||||||||||||||||||||||| | |||||||||    
T  7742730 cttgaaacttgaaacgatttttcttcactttgtattgtcttcaaagaccttctaaga 7742786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 16622541 - 16622581
Alignment:
Q  203 gaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  16622541 gaacttgaaatgaattttcttcaatttgtattgtcttcaaa 16622581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 18872912 - 18872976
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaagatcattgaa 263  Q
    |||||||||| ||||||||| |||||| |||||||||||||||| || | |||||  ||||||||    
T  18872912 cttggaacttcaaatgaattttcttcaatttgtattgtcttcaactaccgtctaaactcattgaa 18872976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 19331759 - 19331696
Alignment:
Q  204 aacttgaaatgaattatcttcactttgtattgtcttcaaataacttct-aagatcattgaattt 266  Q
    ||||| |||||| |||||||||| |||||||||||||||||  ||||| || ||||||||||||    
T  19331759 aacttcaaatgacttatcttcacattgtattgtcttcaaatgtcttctaaaaatcattgaattt 19331696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 22643746 - 22643821
Alignment:
Q  180 ttctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||| ||||  ||| |||||||  |||||||||||| |||||| |||||||||| |||||||| ||| |||||    
T  22643746 ttctttcgtcttgcaataccttggagtttgaaatgaattttcttcagtttgtattgtattcaaataccttttaaga 22643821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 17027778 - 17027725
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||| ||||||| |||| |||||||||||||||||||||||  | |||||||||    
T  17027778 ggaaattgaaattaattttcttcactttgtattgtcttcaagaaccttctaaga 17027725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 18452677 - 18452709
Alignment:
Q  204 aacttgaaatgaattatcttcactttgtattgt 236  Q
    ||||||||||||||| |||||||||||||||||    
T  18452677 aacttgaaatgaattttcttcactttgtattgt 18452709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 30072366 - 30072330
Alignment:
Q  203 gaacttgaaatgaattatcttcactttgtattgtctt 239  Q
    |||||||||||||| | ||||||||||||||||||||    
T  30072366 gaacttgaaatgaaatttcttcactttgtattgtctt 30072330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 228047 - 228103
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  228047 cttggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaaga 228103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 26854161 - 26854236
Alignment:
Q  180 ttctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||| ||||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||    
T  26854161 ttcttccatcttgcaatgccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatatcttctaaga 26854236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 52271104 - 52271160
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaag 254  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  52271104 ccttggaatttgaaatgaattttcttcactttgtattgtcttcaaataccttctaag 52271160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 23506010 - 23505947
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaagatcattga 262  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  |||| |||| ||||||    
T  23506010 cttggaacttgaaatgaattttcttcactttgtattgtcttcaaatgtcttccaagaccattga 23505947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 11769857 - 11769910
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  11769857 ggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaaga 11769910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 19257665 - 19257722
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||| ||||||| |||| |||||||||||||||||||||||| | |||||||||    
T  19257665 ccttggaaattgaaataaattttcttcactttgtattgtcttcaaagaccttctaaga 19257722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 30675735 - 30675682
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| ||||||||||||||| |||||||| | |||||||||    
T  30675735 ggaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaaga 30675682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 25494357 - 25494405
Alignment:
Q  207 ttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||    
T  25494357 ttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaaga 25494405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 21548936 - 21548846
Alignment:
Q  165 accctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||   ||||||||| |||| |||| ||||||||||| ||||||||| | ||||  ||||||| |||||||||  |||||||||    
T  21548936 accctttttctagcattctttcgtcttgtaatgccttggaacttcaaatgaatttttttcaacttgtattatcttcaaatgtcttctaaga 21548846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 12423778 - 12423831
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||||  ||||||||||||||||||||||  | |||||||||    
T  12423778 ggaacttgaaatgaatttccttcactttgtattgtcttcaacaaccttctaaga 12423831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 23223665 - 23223624
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  23223665 ggaacttgaaatgaatttttttcactttgtattgtcttcaaa 23223624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 25126735 - 25126690
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||||    
T  25126735 ccttggaacttgaaatgaattttcttcattttgtattgtattcaaa 25126690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 26657727 - 26657686
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  26657727 ggaacttgaaatgaattttcttcactttgttttgtcttcaaa 26657686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 15298731 - 15298786
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||||||| | ||||| |||||||| ||||||||||||| |||||    
T  15298731 cttggaacttgaaatgaattttattcacattgtattg-cttcaaataacttttaaga 15298786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 30782011 - 30781971
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 242  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  30782011 ggaacttgaaatcaattttcttcactttgtattgtcttcaa 30781971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 25665629 - 25665676
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaata 245  Q
    ||||||||||| |||||| || |||||||||||||||||||| |||||    
T  25665629 ccttggaacttcaaatgatttttcttcactttgtattgtctttaaata 25665676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 9328418 - 9328365
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||| | |||||| ||||||||| |||||||||||||| | |||||||||    
T  9328418 ggaacttggactgaattttcttcacttagtattgtcttcaaaaaccttctaaga 9328365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 23519632 - 23519685
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||| |||| |||||||||| ||||||||||||  | |||||||||    
T  23519632 ggaacttgaaataaattttcttcactttctattgtcttcaacaaccttctaaga 23519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 50047426 - 50047386
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 242  Q
    ||||||| ||||||||| |||||| ||||||||||||||||    
T  50047426 ggaacttaaaatgaattttcttcattttgtattgtcttcaa 50047386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 2098 - 2008
Alignment:
Q  163 cgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 253  Q
    |||||||||||||||| ||||| |||||| | |  |||||||||||||||| |||| ||||||||||||||| |||||| | |||||||||    
T  2098 cgaccctttttcggcccttcttccatcttgtgacgccttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaa 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 12534 - 12444
Alignment:
Q  163 cgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 253  Q
    |||||||||||||||| ||||| |||||| | |  |||||||||||||||| |||| ||||||||||||||| |||||| | |||||||||    
T  12534 cgaccctttttcggcccttcttccatcttgtgacgccttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaa 12444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 31859760 - 31859817
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  31859760 ccttggaacttgaaataaattttcttcactttgtattgtcttcaaataccttctaaga 31859817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 17187427 - 17187371
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  17187427 cttgaaacttgaaatgaattttctttactttgtattgtcttcaaataacttctaaga 17187371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 21077507 - 21077431
Alignment:
Q  179 attctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||| ||||||| ||| ||||||||||||||||||||| | |||| |||||||||||||| | || |||||||||    
T  21077507 attcttccatctttcaatgccttggaacttgaaatgaattttattcaatttgtattgtcttcgattaccttctaaga 21077431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 23353873 - 23353818
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||    
T  23353873 ccttggaacttgaaatgaattttcttcactttgtattgtcttaaaagaccttctaa 23353818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 1695710 - 1695763
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| | |||||||||||||||||||||  | |||||||||    
T  1695710 ggaacttgaaatgaattttattcactttgtattgtcttcaacaaccttctaaga 1695763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 15192454 - 15192401
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| ||||||||||| |||||||||||  | |||||||||    
T  15192454 ggaacttgaaatgaattgtcttcactttgaattgtcttcaacaaccttctaaga 15192401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 17026560 - 17026601
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  17026560 ggaacttgaaattaattttcttcactttgtattgtcttcaaa 17026601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 33519285 - 33519228
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||| |||||||||||| ||||||  |||||||||||||||| | |||||||||    
T  33519285 ccttggaatttgaaatgaattttcttcaacttgtattgtcttcaaagaccttctaaga 33519228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 29437716 - 29437674
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttc 240  Q
    ||||||||||| ||||||| | |||||||||||||||||||||    
T  29437716 ccttggaacttcaaatgaagtttcttcactttgtattgtcttc 29437674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 18898233 - 18898192
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    ||||||||||||||||| |||| |||||||||||| ||||||    
T  18898233 ggaacttgaaatgaattttctttactttgtattgtattcaaa 18898192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 34864159 - 34864212
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||| ||||||||| |||||| |||||||||||| |||| | |||||||||    
T  34864159 ggaactttaaatgaattttcttcattttgtattgtctacaaaaaccttctaaga 34864212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 47024629 - 47024682
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||| |||| ||||||||||||| ||| |||||| | |||||||||    
T  47024629 ggaacttgaaataaattctcttcactttgtactgttttcaaaaaccttctaaga 47024682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 51884853 - 51884800
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||| |||| ||||||||||||||||| |||||  | |||||||||    
T  51884853 ggaacttgaaattaattttcttcactttgtattgtattcaacaatcttctaaga 51884800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 5906631 - 5906679
Alignment:
Q  207 ttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||| |||| |||||||||| |||||||| | |||||||||    
T  5906631 ttgaaatgaattttcttaactttgtattatcttcaaaaaccttctaaga 5906679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 19602052 - 19602008
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    |||||||| ||||||||||| ||| |||||| |||||||||||||    
T  19602052 cttggaacatgaaatgaattttctccactttttattgtcttcaaa 19602008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 245
Target Start/End: Complemental strand, 30544095 - 30543970
Alignment:
Q  119 ggggctcatgaggcactcccctcatgtgcgattttagcagcttacgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaatt 218  Q
    ||||| |||||||||  |||||||||  |||||| ||||| || ||||||||||||   ||||||| |  |||  ||| |||||||||||||||||||||    
T  30544095 ggggcacatgaggcaa-cccctcatgcacgatttcagcagttttcgaccctttttcactcattcttccgccttgcaatgccttggaacttgaaatgaatt 30543997  T
Q  219 atcttcactttgtattgtcttcaaata 245  Q
     |||||||||| ||||||||| |||||    
T  30543996 ttcttcactttatattgtctttaaata 30543970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 11437673 - 11437618
Alignment:
Q  200 ttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  11437673 ttggaacttcaaatgaattatcttcactctgtattgtcttcaaatgtcttctaaga 11437618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 16052140 - 16052193
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| |||||| ||||||||||||||||| | |||||||||    
T  16052140 ggaacttgaaatgaattttcttcattttgtattgtcttcaaaaaccttctaaga 16052193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 12357754 - 12357696
Alignment:
Q  178 cattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgt 236  Q
    ||||||||| |||| |||| |||||||| |||||||||||| |||||||||| ||||||    
T  12357754 cattctttcctcttataatgccttggaatttgaaatgaattttcttcactttttattgt 12357696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 12358882 - 12358824
Alignment:
Q  178 cattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgt 236  Q
    ||||||||| |||| |||| |||||||| |||||||||||| |||||||||| ||||||    
T  12358882 cattctttcctcttataatgccttggaatttgaaatgaattttcttcactttttattgt 12358824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 16054545 - 16054492
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| ||||||||||||||| |||||||  | |||||||||    
T  16054545 ggaacttgaaatgaattttcttcactttgtattttcttcaacaaccttctaaga 16054492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 22894391 - 22894436
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  22894391 ccttggaacttcaaaagaattttcttcactttgtattgtcttcaaa 22894436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 27097661 - 27097718
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||| |||||| ||||||  |||||||||||||||| | |||||||||    
T  27097661 ccttggaacttgaattgaattttcttcaacttgtattgtcttcaaagaccttctaaga 27097718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 28291961 - 28292017
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||  ||| |||||| ||||||||||||||||| | |||||||||    
T  28291961 cttggaacttgaaatttattttcttcattttgtattgtcttcaaagaccttctaaga 28292017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 13081800 - 13081851
Alignment:
Q  204 aacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||| |||||| ||||||||||||||||  | |||||||||    
T  13081800 aacttgaaatgaattttcttcattttgtattgtcttcaacaaccttctaaga 13081851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 241
Target Start/End: Original strand, 28901217 - 28901252
Alignment:
Q  206 cttgaaatgaattatcttcactttgtattgtcttca 241  Q
    ||||||||||||| ||||||||||||||||||||||    
T  28901217 cttgaaatgaattttcttcactttgtattgtcttca 28901252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 31436724 - 31436678
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaata 245  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||    
T  31436724 ccttggaacttgaaat-aatttttttcactttgtattgtcttcaaata 31436678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 11310120 - 11310172
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||| |||| ||||||||||||||||| |||||| | |||||||||    
T  11310120 ggaacttgaaat-aattttcttcactttgtattgttttcaaaaaccttctaaga 11310172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 255
Target Start/End: Original strand, 13583403 - 13583436
Alignment:
Q  222 ttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||||||||||| |||||||||    
T  13583403 ttcactttgtattgtcttcaaatatcttctaaga 13583436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 28902340 - 28902287
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||| ||||||||| | |||||||||||||||||||||  | |||||||||    
T  28902340 ggaacttaaaatgaattttattcactttgtattgtcttcaataaccttctaaga 28902287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 32239543 - 32239502
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtctt 239  Q
    ||||| ||||||||||||||| |||||||||| |||||||||    
T  32239543 ccttgaaacttgaaatgaattttcttcactttttattgtctt 32239502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 30850960 - 30851004
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    ||||||||||||||| |||| ||||||||||||||| | ||||||    
T  30850960 cttggaacttgaaattaattttcttcactttgtattatattcaaa 30851004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 24507267 - 24507357
Alignment:
Q  163 cgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 253  Q
    |||||||||||||||| |||||  ||||| | |  |||||||||||||||| |||| ||||||||||||||| |||||| | |||||||||    
T  24507267 cgaccctttttcggcccttcttctatcttgtgacgccttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaa 24507357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 15575175 - 15575122
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||||||    
T  15575175 ggaacttgaaatgaattttcttcactttgtattgtcttcaacgaccttctaaga 15575122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 17860312 - 17860365
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| ||||||||||||||||||| |||| | |||||||||    
T  17860312 ggaacttgaaatgaattttcttcactttgtattgtctacaaaaaccttctaaga 17860365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 26499706 - 26499763
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||| | |||||||||    
T  26499706 ccttgaaacttgaaatgaattttctttactttgtattgtcttcaaaaaccttctaaga 26499763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 30355567 - 30355515
Alignment:
Q  203 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||| | |||||||| ||||||||||||| | |||||||||    
T  30355567 gaacttgaaatgaattttattcactttttattgtcttcaaaaaccttctaaga 30355515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 15998761 - 15998708
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||||  |||||||||||||||||| |||  | |||||||||    
T  15998761 ggaacttgaaatgaatttgcttcactttgtattgtctacaacaaccttctaaga 15998708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 14768093 - 14768189
Alignment:
Q  156 cagcttacgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttcta 252  Q
    |||||| | ||||||||||| || ||||| |||| | | || ||||| ||||| ||||  ||| ||||| |||| ||||||||||||||| ||||||    
T  14768093 cagctttccaccctttttcgtccgttcttccatcctgtgatgccttgtaacttaaaatctattttcttcgctttctattgtcttcaaataccttcta 14768189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 18818956 - 18818900
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||    
T  18818956 cttggaacttgaattgaattttcttcactttgtattgtcttcaaagaccttctaaga 18818900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 34063700 - 34063755
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 253  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||  |||||||    
T  34063700 ccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatgtcttctaa 34063755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 16593614 - 16593667
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||||||    
T  16593614 ggaacttgaaatgaattttcttcactttgtattgtcttcaacaaccttctaaga 16593667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 18236130 - 18236219
Alignment:
Q  166 ccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||  ||||||| | ||||| ||| |||| |||||||||||||||| ||||||  |||||||||||||||  | |||||||||    
T  18236130 ccctttttcgatcattcttccgtctttaaatgcctttgaacttgaaatgaattttcttcatcttgtattgtcttcaacaaccttctaaga 18236219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 22525679 - 22525736
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||| |||||||||| |||| |||||||||||| ||||||||||||| |||||||||    
T  22525679 ccttgaaacttgaaataaattttcttcactttgtgttgtcttcaaataccttctaaga 22525736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 27417122 - 27417167
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  27417122 ccttggaacttgaaatgaattttcttcactttgtattgttttcaaa 27417167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 17415028 - 17415080
Alignment:
Q  203 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||| |||||||||| | |||||||||||||||| ||||||    
T  17415028 gaacttgaaatgaattttcttcactttttgttgtcttcaaataactcctaaga 17415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 30999021 - 30998969
Alignment:
Q  203 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||||| ||| |||||||||||||||||||  | |||||||||    
T  30999021 gaacttgaaatgaattttctccactttgtattgtcttcaacaaccttctaaga 30998969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 24188224 - 24188165
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaagatc 257  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||| |  ||||||||||    
T  24188224 ccttggcacttggaatgaatcttcttcactttgtattgtcttcaaaaactttctaagatc 24188165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 14921898 - 14921955
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||| || |||||| || ||||||||||||||||||| || ||| |||||||||    
T  14921898 ccttggaaattcaaatgatttttcttcactttgtattgtctacatataccttctaaga 14921955  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 25474288 - 25474235
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||| ||||||||||| |||||||||| ||||||||||||  | |||||||||    
T  25474288 ggaacctgaaatgaattttcttcactttatattgtcttcaacaaccttctaaga 25474235  T

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Target: scaffold0190 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 11564 - 11614
Alignment:
Q  205 acttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  11564 acttgaaatgaattttcttcactttgtattgtcttcaaataccttataaga 11614  T

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Target: scaffold1149 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 2040 - 1997
Alignment:
Q  200 ttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 243  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  2040 ttggaacttgaaatgaattttctttactttgtattgtcttcaaa 1997  T

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Target: scaffold0836 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 2863 - 2803
Alignment:
Q  198 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaagatca 258  Q
    ||||||| ||| ||||||||| |||||||||||||||||| ||||||   |||||||||||    
T  2863 ccttggatctttaaatgaattttcttcactttgtattgtcatcaaatgtattctaagatca 2803  T

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Target: scaffold0188 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 26819 - 26858
Alignment:
Q  203 gaacttgaaatgaattatcttcactttgtattgtcttcaa 242  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  26819 gaacttgaaacgaattttcttcactttgtattgtcttcaa 26858  T

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Target: scaffold0282 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 22477 - 22527
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttcta 252  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| | ||||||    
T  22477 ggaacttgaaatgaattttcttcaccttgtattgtcttaaaaaaccttcta 22527  T

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Target: scaffold0362 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 7870 - 7817
Alignment:
Q  202 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaaga 255  Q
    ||||||||||||||||| |||| |||||||| |||||||||  | |||||||||    
T  7870 ggaacttgaaatgaattttcttgactttgtactgtcttcaacaaccttctaaga 7817  T

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Target: scaffold0185 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 2754 - 2709
Alignment:
Q  199 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaat 244  Q
    |||||||| |||||||| || |||||||| ||||||||||||||||    
T  2754 cttggaacatgaaatgagttttcttcactctgtattgtcttcaaat 2709  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 59038 - 58958
Alignment:
Q  164 gaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaata 245  Q
    |||||||||||   | ||||||| |||| | || ||||||||||| ||||||||| |||||| |||| ||||||||||||||    
T  59038 gaccctttttcaagcgttctttcgtcttgtgataccttggaactttaaatgaatt-tcttcattttgcattgtcttcaaata 58958  T

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