View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7053_low_36 (Length: 207)

Name: NF7053_low_36
Description: NF7053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7053_low_36
NF7053_low_36
[»] chr8 (3 HSPs)
chr8 (19-189)||(39842870-39843040)
chr8 (19-189)||(17680213-17680383)
chr8 (19-153)||(6666409-6666543)
[»] chr5 (11 HSPs)
chr5 (19-189)||(28846540-28846710)
chr5 (19-189)||(24962566-24962736)
chr5 (19-171)||(21993640-21993792)
chr5 (19-171)||(23638735-23638887)
chr5 (19-171)||(23834000-23834152)
chr5 (19-171)||(27231427-27231579)
chr5 (19-171)||(33842623-33842775)
chr5 (19-171)||(12178353-12178505)
chr5 (19-171)||(26087122-26087274)
chr5 (19-171)||(11811199-11811351)
chr5 (39-171)||(37580755-37580887)
[»] chr4 (7 HSPs)
chr4 (19-189)||(8100382-8100552)
chr4 (19-189)||(21528932-21529102)
chr4 (19-171)||(26217979-26218131)
chr4 (39-189)||(12510314-12510464)
chr4 (27-117)||(12511465-12511555)
chr4 (27-117)||(12511038-12511128)
chr4 (39-152)||(15077014-15077127)
[»] chr3 (12 HSPs)
chr3 (19-189)||(41000922-41001092)
chr3 (19-189)||(41009704-41009874)
chr3 (19-187)||(8202823-8202991)
chr3 (19-171)||(25266188-25266340)
chr3 (19-171)||(10719998-10720150)
chr3 (19-171)||(15682450-15682602)
chr3 (29-187)||(17928451-17928609)
chr3 (27-189)||(3242630-3242792)
chr3 (52-171)||(27881691-27881810)
chr3 (19-82)||(9552495-9552558)
chr3 (39-171)||(3679627-3679759)
chr3 (39-171)||(30016197-30016329)
[»] chr2 (7 HSPs)
chr2 (19-189)||(35141250-35141420)
chr2 (19-189)||(42571803-42571973)
chr2 (19-189)||(15950319-15950489)
chr2 (27-189)||(24288213-24288375)
chr2 (19-164)||(21857385-21857530)
chr2 (19-171)||(3763730-3763882)
chr2 (19-171)||(16276091-16276243)
[»] chr1 (4 HSPs)
chr1 (19-189)||(31542582-31542752)
chr1 (19-187)||(2387793-2387961)
chr1 (19-171)||(31554784-31554936)
chr1 (19-171)||(13471376-13471528)
[»] scaffold0056 (1 HSPs)
scaffold0056 (19-189)||(12574-12744)
[»] chr7 (9 HSPs)
chr7 (19-189)||(13834124-13834294)
chr7 (19-171)||(29024797-29024949)
chr7 (19-171)||(566967-567119)
chr7 (19-164)||(27436610-27436755)
chr7 (19-171)||(27974008-27974160)
chr7 (19-171)||(5206889-5207041)
chr7 (29-164)||(38412256-38412391)
chr7 (39-171)||(3428700-3428832)
chr7 (59-152)||(12587035-12587128)
[»] chr6 (4 HSPs)
chr6 (19-189)||(25503774-25503944)
chr6 (19-159)||(5006783-5006923)
chr6 (19-171)||(16636802-16636954)
chr6 (19-171)||(27056066-27056218)
[»] scaffold0044 (1 HSPs)
scaffold0044 (29-171)||(73906-74048)
[»] scaffold0389 (1 HSPs)
scaffold0389 (19-171)||(2362-2514)
[»] scaffold2162 (1 HSPs)
scaffold2162 (19-171)||(561-713)
[»] scaffold0157 (2 HSPs)
scaffold0157 (39-189)||(10013-10163)
scaffold0157 (27-117)||(9352-9442)
[»] scaffold0362 (1 HSPs)
scaffold0362 (27-173)||(1382-1528)
[»] scaffold0138 (1 HSPs)
scaffold0138 (26-101)||(10861-10936)
[»] scaffold0031 (1 HSPs)
scaffold0031 (46-105)||(29015-29074)
[»] scaffold0014 (1 HSPs)
scaffold0014 (82-152)||(184024-184094)
[»] scaffold0125 (1 HSPs)
scaffold0125 (82-152)||(11857-11926)
[»] scaffold0004 (1 HSPs)
scaffold0004 (42-152)||(192001-192111)


Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 39842870 - 39843040
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39842870 catcaatgaagatactaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 39842969  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39842970 tttcctattttcacgagtgtctgcatatgcgagccgaacttggatgaagacattgaacgactttactgatg 39843040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 17680213 - 17680383
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17680213 catcaatgaagatactaggctagttaacttctctacctcagcccgaagtgttgttacctctgcacgaagctcgtggacctcttgctcaagtcgatccatt 17680312  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17680313 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattgaacgactttactgatg 17680383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 6666543 - 6666409
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| |||||||||||  |||||||||  |||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||    
T  6666543 catcaatgaagatactaggtcagttaacttttctacctcagcccaaagtgttgttacctctccacgcagctcatggacctcttgctcaagccgatccgtt 6666444  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagcc 153  Q
    |||||| | ||||||||||||| ||||||||||||    
T  6666443 tttcctgtctgcacgagtgtcttcatatgcgagcc 6666409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 28846710 - 28846540
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28846710 catcaatgaagatactaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 28846611  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28846610 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattgaacgactttactgatg 28846540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 24962566 - 24962736
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24962566 catcaatgaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 24962665  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  24962666 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattggaccactttactgatg 24962736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 21993640 - 21993792
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||    
T  21993640 catcaatgaagatacaaggctagttaatttctctacctcagcccgaagtgttgttacctctccacgaagatcctggacttcttgctcaagccgatccatt 21993739  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21993740 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacat 21993792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 23638887 - 23638735
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||| || ||||||    
T  23638887 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacctctccacgaagctcatgaacctcttgctcaagccggtccatt 23638788  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  23638787 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacat 23638735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 23834000 - 23834152
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||| || ||||||    
T  23834000 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacctctccacgaagctcatgaacctcttgctcaagccggtccatt 23834099  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  23834100 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacat 23834152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 27231427 - 27231579
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||| || ||||||    
T  27231427 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacctctccacgaagctcatgaacctcttgctcaagccggtccatt 27231526  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||||||    
T  27231527 tttcctgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 27231579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 33842623 - 33842775
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  33842623 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 33842722  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  33842723 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 33842775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 12178353 - 12178505
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||     
T  12178353 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttatttctccacgaagctcgtggacctcttgctcaagttgatccatc 12178452  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  12178453 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 12178505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 26087122 - 26087274
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||     
T  26087122 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttatttctccacgaagctcgtggacctcttgctcaagttgatccatc 26087221  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  26087222 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 26087274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 11811199 - 11811351
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||     
T  11811199 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttatttctccacgaagctcgtggacctcttgctcaagttgatccatc 11811298  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||  |||||||||||||||| ||||||    
T  11811299 ttttgtgtttgcacgagtgtctgcatatatgagccgaacttggatgaagacat 11811351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 37580887 - 37580755
Alignment:
Q  39 tagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgt 138  Q
    ||||||||||| ||||||| ||||||||| | || || ||| |||||||||||||||||||||   |||||||||||||||||  | |||||||||||||    
T  37580887 tagttaacttctctacctcggcccgaagtatagtcacttcttcacgaagctcgtggacctcttctccaagtcgatccattttttgtgtttgcacgagtgt 37580788  T
Q  139 ctgcatatgcgagccgaacttggatggagacat 171  Q
     ||||| || |||| ||| ||| ||| ||||||    
T  37580787 ttgcatgtgtgagctgaagttgaatgaagacat 37580755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 8100382 - 8100552
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8100382 catcaatgaagatactaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 8100481  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8100482 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattgaacgactttactgatg 8100552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 21528932 - 21529102
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21528932 catcaatgaagatactaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 21529031  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||    
T  21529032 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattgaactacattactgatg 21529102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 26217979 - 26218131
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| |||||||||    
T  26217979 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttacctctccccgaagttcctggacttcttgctcaagccgatccatt 26218078  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  26218079 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacat 26218131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 189
Target Start/End: Original strand, 12510314 - 12510464
Alignment:
Q  39 tagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgt 138  Q
    ||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||   |||||| |||  | |||| || |||||    
T  12510314 tagttaacttctctacctcggcccgaagtgttgttacctcttcacgaacctcgtggacctcttgctcaagctaatccatcttttgtgtttgtacaagtgt 12510413  T
Q  139 ctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
     ||||||||| ||| ||| ||| | | |||||||  || ||||||||||||    
T  12510414 ttgcatatgctagctgaagttgaaagaagacattagaccactttactgatg 12510464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 12511555 - 12511465
Alignment:
Q  27 aagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccat 117  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||||  |||| | ||||||||||||||||||||||||||| |||||||    
T  12511555 aagatactaggttaggtaacttctctacctcggcccgaagtgttgttttctcttcgcgaagctcgtggacctcttgctcaagttgatccat 12511465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 12511128 - 12511038
Alignment:
Q  27 aagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccat 117  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||||   ||| | ||||||||||||||||||||||||||| |||||||    
T  12511128 aagatactaggttaggtaacttctctacctcggcccgaagtgttgttttatcttcgcgaagctcgtggacctcttgctcaagttgatccat 12511038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 15077014 - 15077127
Alignment:
Q  39 tagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgt 138  Q
    ||||||||||| ||||||| ||||||||||| || |||||  | |||||||| ||||||||||   | ||| |||||||  ||  | |||||||||||||    
T  15077014 tagttaacttctctacctcggcccgaagtgtagtgacctcctcgcgaagctcatggacctcttctccgagttgatccatactttgtgtttgcacgagtgt 15077113  T
Q  139 ctgcatatgcgagc 152  Q
     |||||||| ||||    
T  15077114 ttgcatatgtgagc 15077127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 4e-80; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 41001092 - 41000922
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41001092 catcaatgaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 41000993  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  41000992 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattggaccactttactgatg 41000922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 41009874 - 41009704
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41009874 catcaatgaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 41009775  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  41009774 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattggaccactttactgatg 41009704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 8202823 - 8202991
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8202823 catcaatgaagatactaggctagttaacttctctacctcagcccaaagtgttgttacctctccacgaagctcgtggacctcttgctcaaatcgatccatt 8202922  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactga 187  Q
    |||  | |||||||||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  8202923 ttttgtgtttgcacgagtgactgcatatgcgagccgaacttggatgaagacatcgaaccactttactga 8202991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 25266340 - 25266188
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  25266340 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 25266241  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  25266240 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 25266188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 10719998 - 10720150
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  10719998 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 10720097  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  10720098 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 10720150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 15682450 - 15682602
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| || |||||||||||||| || ||||||    
T  15682450 catcaatgaagatacaaggctagttaacttctctacttcagccctaagtgttgttacctctccacgaagctcatgaacctcttgctcaagccggtccatt 15682549  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||| ||||||||||||||||||| || |||||||||||||||| ||||||    
T  15682550 tttcctgtttgcacgagtgtctgcatgtgtgagccgaacttggatgaagacat 15682602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 17928609 - 17928451
Alignment:
Q  29 gatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctattt 128  Q
    ||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||||||| || ||||| |||||||||||| ||||||| |||  | |||    
T  17928609 gatacaaggctagttaacttctctacctcaacccgaagtgttattacctctccacgaagttcctggacttcttgctcaagttgatccatcttttgtgttt 17928510  T
Q  129 gcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactga 187  Q
     ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  17928509 acacgagtgtctgcatatgcgagccgaacttggatgaagacatcgaaccactttactga 17928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 27 - 189
Target Start/End: Original strand, 3242630 - 3242792
Alignment:
Q  27 aagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctat 126  Q
    ||||||||||  ||||||||||| ||| ||| |||||||||||||| |||||| | |||||||||||||||||||| |||||  |||||||||||  |||    
T  3242630 aagatactagtttagttaacttctctaactcggcccgaagtgttgtcacctcttcgcgaagctcgtggacctcttgttcaagctgatccattttttgtat 3242729  T
Q  127 ttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    ||||||||| || ||||| ||||||||||| |||||||  |||||   || ||||||||||||    
T  3242730 ttgcacgagagtttgcatgtgcgagccgaatttggatgaggacatcagaccactttactgatg 3242792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 52 - 171
Target Start/End: Complemental strand, 27881810 - 27881691
Alignment:
Q  52 tacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgtctgcatatgcgag 151  Q
    |||||||||||||||||||||| |||||| |||||||||  |||  ||||| |||||  |||| || |||  | |||| |||||||||||||||||||||    
T  27881810 tacctcagcccgaagtgttgttgcctctctacgaagctcaaggaattcttgttcaagctgatcaatcttttgtgtttgtacgagtgtctgcatatgcgag 27881711  T
Q  152 ccgaacttggatggagacat 171  Q
    ||||||||||||| ||||||    
T  27881710 ccgaacttggatgaagacat 27881691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 9552495 - 9552558
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctcca 82  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  9552495 catcaatgaagatactaggctagttaacttctctacctcagtccgaagtgttgttacctctcca 9552558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 3679759 - 3679627
Alignment:
Q  39 tagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctc-aagtcgatccatttttcctatttgcacgagtg 137  Q
    ||||||||||| ||||| | |||||||||   ||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||  | ||||||||||||    
T  3679759 tagttaacttctctaccccggcccgaagtacagttacttcttcacgaagctcgtggacctctt-ctctaagtcgatccattttttgtgtttgcacgagtg 3679661  T
Q  138 tctgcatatgcgagccgaacttggatggagacat 171  Q
    | ||||| || |||| ||| ||| ||| ||||||    
T  3679660 tttgcatgtgtgagctgaagttgaatgaagacat 3679627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 30016329 - 30016197
Alignment:
Q  39 tagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctc-aagtcgatccatttttcctatttgcacgagtg 137  Q
    ||||||||||| ||||||| |||||||||   ||||| ||| |||||||||| |||||||||| ||| ||||||||||||||||  | ||||||||||||    
T  30016329 tagttaacttctctacctcggcccgaagtacagttacttcttcacgaagctcatggacctctt-ctctaagtcgatccattttttgtgtttgcacgagtg 30016231  T
Q  138 tctgcatatgcgagccgaacttggatggagacat 171  Q
    | ||||| || |||| ||| ||| ||| ||||||    
T  30016230 tttgcatgtgtgagctgaagttgaatgaagacat 30016197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 4e-80; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 35141420 - 35141250
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35141420 catcaatgaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 35141321  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  35141320 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattggaccactttactgatg 35141250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 42571803 - 42571973
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42571803 catcaatgaagatactaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 42571902  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  42571903 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattgaacgactttacggatg 42571973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 15950319 - 15950489
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15950319 catcaatgaagatactaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 15950418  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  15950419 tttcctgtttgcacgagtgtctgcatatgcaagctgaacttggatgaagacattgaacgactttactgatg 15950489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 27 - 189
Target Start/End: Complemental strand, 24288375 - 24288213
Alignment:
Q  27 aagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctat 126  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |    
T  24288375 aagatactaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatcgatttttcttgt 24288276  T
Q  127 ttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24288275 ttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattgaacgactttactgatg 24288213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 21857385 - 21857530
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||| || ||||||    
T  21857385 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacctctccacgaagctcatgaacctcttgctcaagccggtccatt 21857484  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatg 164  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  21857485 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatg 21857530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 3763730 - 3763882
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  3763730 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 3763829  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  3763830 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 3763882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 16276243 - 16276091
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  16276243 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 16276144  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | ||||| |||||||||||||||| |||||||||||||||| ||||||    
T  16276143 ttttgtgtttgctcgagtgtctgcatatgtgagccgaacttggatgaagacat 16276091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 31542752 - 31542582
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31542752 catcaatgaagatactaggctagttaacttcactacctcatcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 31542653  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |||||    
T  31542652 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattggaccactttattgatg 31542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 2387961 - 2387793
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2387961 catcaatgaagatactaggctagttaacttctctaccttggcccgaagcgttgttacctctccacgaagcgcgtggacctcttgctcaagtcgatccatt 2387862  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactga 187  Q
    |||||| |||||| ||||||||| |||||||||||||||||||||  |||||| |||| ||||||||||    
T  2387861 tttcctgtttgcatgagtgtctgtatatgcgagccgaacttggataaagacatcgaaccactttactga 2387793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 31554936 - 31554784
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  31554936 catcaatgaagatacaaggctagttaaattctctacctcagccctaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 31554837  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  31554836 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 31554784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 13471528 - 13471376
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||  |||| |||||||||||||||||||||||||||| |||||||     
T  13471528 catcaatgaagatacaaggctagttaacttctctacctcagcccaaagtgttgttaaatctcaacgaagctcgtggacctcttgctcaagttgatccatc 13471429  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  13471428 ttttgtgtttgcacgagtgtctacatatgcgagccgaacttggatgaagacat 13471376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 12744 - 12574
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12744 catcaatgaagatactaggctagttaacttctccacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgttcaagtcgatccatt 12645  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  12644 tttcctgtttgcacgagtgtctgcatttgcgagccgaacttggatgaagacattgaacaactttactgatg 12574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 6e-73; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 13834294 - 13834124
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  13834294 catcaatgaagatattaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgcagctcatggacctcttgctcaagccgatccatt 13834195  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13834194 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattgaacgactttactgatg 13834124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 29024949 - 29024797
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || |||||||||||||| || ||||||    
T  29024949 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacctctccacgaagctcatgaacctcttgctcaagccggtccatt 29024850  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  29024849 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacat 29024797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 566967 - 567119
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  566967 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 567066  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  567067 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 567119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 27436755 - 27436610
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |||||||     
T  27436755 catcaatgaggatactaggctagctaacttctctacctcagcccgaagtgttgttacctctccacgaagctcctggacttcttgctcaagctgatccatg 27436656  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatg 164  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  27436655 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatg 27436610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 27974008 - 27974160
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||      
T  27974008 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccaac 27974107  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  27974108 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 27974160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 5206889 - 5207041
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||     
T  5206889 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacttctccccgaagctcgtggacctcttgctcaagttgatccatc 5206988  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  5206989 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 5207041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 29 - 164
Target Start/End: Complemental strand, 38412391 - 38412256
Alignment:
Q  29 gatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctattt 128  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||| ||  | || ||||||||||||||||||||||||||| |||    
T  38412391 gatacaagactagttaacttctctacctcagcccgaagtgttgttacctctccacgaagttcccgtacttcttgctcaagtcgatccatttttcctgttt 38412292  T
Q  129 gcacgagtgtctgcatatgcgagccgaacttggatg 164  Q
    |||||||||| ||||||||||||||| |||||||||    
T  38412291 gcacgagtgtttgcatatgcgagccggacttggatg 38412256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 3428700 - 3428832
Alignment:
Q  39 tagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctc-aagtcgatccatttttcctatttgcacgagtg 137  Q
    ||||||||||| ||||||| |||||||||   ||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||  | ||||||||||||    
T  3428700 tagttaacttctctacctcggcccgaagtacagttacttcttcacgaagctcgtggacctctt-ctctaagtcgatccattttttgtgtttgcacgagtg 3428798  T
Q  138 tctgcatatgcgagccgaacttggatggagacat 171  Q
    | ||||| || |||| ||| ||| ||| ||||||    
T  3428799 tttgcatgtgtgagctgaagttgaatgaagacat 3428832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 12587128 - 12587035
Alignment:
Q  59 gcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgtctgcatatgcgagc 152  Q
    |||||||| ||||| || |||  ||||||||||||||||||||| |||||| ||||||||||   | ||||||||||||| |||||||||||||    
T  12587128 gcccgaagcgttgtcacttctttacgaagctcgtggacctcttgttcaagttgatccattttatgtgtttgcacgagtgtttgcatatgcgagc 12587035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 6e-73; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 25503774 - 25503944
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25503774 catcaatgaagatactaggctggttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcatggacctcttgctcaagtcgatccatt 25503873  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  25503874 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacattggaccactttactgatg 25503944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 5006923 - 5006783
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5006923 catcaatgaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaatctcgtggacctcttgctcaagtcgatccatt 5006824  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaactt 159  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  5006823 tttcctgtttgcacgagtgtctgcatatgcgagccgaactt 5006783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 16636954 - 16636802
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||     
T  16636954 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttacttctccacgaagctcgtggacctcttgcttaagttgatccatc 16636855  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  16636854 ttttgtgtttgcacgagtgtctgcatatgtgagccgaacttggatgaagacat 16636802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 27056066 - 27056218
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  27056066 catcaatgaagatacaaggctagttaacttctctacctcagccctaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 27056165  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | ||||||||||||| |||||||| |||||||||||||||| ||||||    
T  27056166 ttttgtgtttgcacgagtgtttgcatatgtgagccgaacttggatgaagacat 27056218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 73906 - 74048
Alignment:
Q  29 gatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctattt 128  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  73906 gatacaaggctagttaacttctctacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagccgatccatttttcctgttt 74005  T
Q  129 gcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  74006 gcacgagtgtctgcatatgcgagccgaacttggatgaagacat 74048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 2514 - 2362
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || || ||||||||||| || ||||||    
T  2514 catcaatgaagatactaggctagttaacttctctacctcagccctaagtgttgttacctctccacgaagctcatgaacttcttgctcaagccgttccatt 2415  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  2414 tttcctgtttgcacgagtgtctgcatatgcgagccgaacttggatgaagacat 2362  T

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Target: scaffold2162 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold2162
Description:

Target: scaffold2162; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 713 - 561
Alignment:
Q  19 catcaataaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatt 118  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||     
T  713 catcaatgaagatacaaggctagttaacttctctacctcagcccgaagtgttgttacttctccacgaagctcgtggacctcttgctcaagttgatccatc 614  T
Q  119 tttcctatttgcacgagtgtctgcatatgcgagccgaacttggatggagacat 171  Q
    |||  | |||||||||||||||||||||  |||||||||||||||| ||||||    
T  613 ttttgtgtttgcacgagtgtctgcatatttgagccgaacttggatgaagacat 561  T

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Target: scaffold0157 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 189
Target Start/End: Complemental strand, 10163 - 10013
Alignment:
Q  39 tagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgt 138  Q
    ||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||   |||||| |||  | |||| || |||||    
T  10163 tagttaacttctctacctcggcccgaagtgttgttacctcttcacgaacctcgtggacctcttgctcaagctaatccatcttttgtgtttgtacaagtgt 10064  T
Q  139 ctgcatatgcgagccgaacttggatggagacattgaacgactttactgatg 189  Q
     ||||||||| ||| ||| ||| | | |||||||  || ||||||||||||    
T  10063 ttgcatatgctagctgaagttgaaagaagacattagaccactttactgatg 10013  T

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Target: scaffold0157; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 9352 - 9442
Alignment:
Q  27 aagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccat 117  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||||  |||| | ||||||||||||||||||||||||||| |||||||    
T  9352 aagatactaggttaggtaacttctctacctcggcccgaagtgttgttttctcttcgcgaagctcgtggacctcttgctcaagttgatccat 9442  T

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Target: scaffold0362 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 1382 - 1528
Alignment:
Q  27 aagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctat 126  Q
    ||||||| ||| | ||||||||| ||||||| |||| |||||| || |||||  |||||||||| ||||||||||| |||| | ||||||||||   | |    
T  1382 aagataccaggttggttaacttctctacctcggcccaaagtgtagtcacctcctcacgaagctcatggacctcttgttcaaattgatccattttatgtgt 1481  T
Q  127 ttgcacgagtgtctgcatatgcgagccgaacttggatggagacattg 173  Q
    |||||||||||| ||||||||||||| ||| ||| ||| ||||||||    
T  1482 ttgcacgagtgtttgcatatgcgagctgaagttgaatgaagacattg 1528  T

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Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 10936 - 10861
Alignment:
Q  26 aaagatactaggctagttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctctt 101  Q
    |||||||| ||| | ||| ||||| ||||||| ||||||||||| || |||||  |||||||||||||||||||||    
T  10936 aaagataccaggttggttcacttctctacctcggcccgaagtgtagtcacctcctcacgaagctcgtggacctctt 10861  T

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Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 29015 - 29074
Alignment:
Q  46 cttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctc 105  Q
    |||| ||| ||| |||||||||||||| |||||| ||||||||||||||||| |||||||    
T  29015 cttctctatctcggcccgaagtgttgtcacctcttcacgaagctcgtggaccgcttgctc 29074  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 184024 - 184094
Alignment:
Q  82 acgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgtctgcatatgcgagc 152  Q
    ||||||||| ||||||||||| |||||| ||||||||||   | ||||||||||||| |||||||| ||||    
T  184024 acgaagctcatggacctcttgttcaagttgatccattttatgtgtttgcacgagtgtttgcatatgtgagc 184094  T

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Target: scaffold0125 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 11926 - 11857
Alignment:
Q  82 acgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgtctgcatatgcgagc 152  Q
    ||||||||| ||||||||||| |||||| ||||||||||   | ||||||||||||| |||||||| ||||    
T  11926 acgaagctc-tggacctcttgttcaagttgatccattttatgtgtttgcacgagtgtttgcatatgtgagc 11857  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 192001 - 192111
Alignment:
Q  42 ttaacttcactacctcagcccgaagtgttgttacctctccacgaagctcgtggacctcttgctcaagtcgatccatttttcctatttgcacgagtgtctg 141  Q
    |||||||| ||||||| ||| ||||||| || |||||  |  ||||||||||||||||||   ||||| |||||||  ||  | |||||| |||||| ||    
T  192001 ttaacttctctacctcggcctgaagtgtagtcacctcctcgggaagctcgtggacctcttctccaagttgatccatactttgtgtttgcatgagtgtttg 192100  T
Q  142 catatgcgagc 152  Q
    |||||||||||    
T  192101 catatgcgagc 192111  T

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