View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7055_high_1 (Length: 534)

Name: NF7055_high_1
Description: NF7055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7055_high_1
NF7055_high_1
[»] scaffold0236 (2 HSPs)
scaffold0236 (13-330)||(19956-20272)
scaffold0236 (460-516)||(20541-20597)
[»] chr8 (48 HSPs)
chr8 (331-458)||(40098777-40098906)
chr8 (332-443)||(14381233-14381346)
chr8 (332-458)||(9056038-9056166)
chr8 (332-443)||(7377549-7377662)
chr8 (342-431)||(26014574-26014665)
chr8 (335-432)||(11692046-11692144)
chr8 (338-440)||(29451762-29451869)
chr8 (373-454)||(13211277-13211358)
chr8 (373-432)||(13228913-13228972)
chr8 (209-319)||(44814057-44814165)
chr8 (372-454)||(15285674-15285756)
chr8 (372-454)||(15466043-15466125)
chr8 (334-418)||(33574845-33574930)
chr8 (381-454)||(37716120-37716193)
chr8 (209-298)||(42631687-42631776)
chr8 (327-443)||(40098750-40098868)
chr8 (332-443)||(14381270-14381383)
chr8 (209-319)||(34496889-34496999)
chr8 (331-458)||(9056015-9056144)
chr8 (330-432)||(31505031-31505135)
chr8 (373-455)||(9808394-9808474)
chr8 (404-458)||(1739634-1739688)
chr8 (332-396)||(1739644-1739710)
chr8 (101-141)||(10467136-10467176)
chr8 (331-409)||(11295658-11295738)
chr8 (376-432)||(27781925-27781981)
chr8 (330-362)||(31810449-31810481)
chr8 (376-432)||(41178001-41178057)
chr8 (376-432)||(42149169-42149225)
chr8 (376-432)||(42631822-42631878)
chr8 (331-362)||(31505153-31505184)
chr8 (227-298)||(41061227-41061298)
chr8 (332-362)||(1744227-1744257)
chr8 (376-458)||(10117011-10117093)
chr8 (332-362)||(24053592-24053622)
chr8 (376-458)||(24053614-24053696)
chr8 (376-409)||(7258651-7258684)
chr8 (331-390)||(13228864-13228925)
chr8 (377-430)||(13271735-13271788)
chr8 (329-362)||(13496427-13496460)
chr8 (376-432)||(3611810-3611866)
chr8 (376-432)||(3611812-3611868)
chr8 (376-432)||(8568861-8568917)
chr8 (376-432)||(8568863-8568919)
chr8 (230-286)||(14955259-14955315)
chr8 (376-432)||(34326288-34326344)
chr8 (376-432)||(38883989-38884045)
chr8 (376-432)||(39655458-39655514)
[»] chr5 (69 HSPs)
chr5 (331-458)||(3851357-3851486)
chr5 (332-458)||(37944597-37944725)
chr5 (335-458)||(42013820-42013945)
chr5 (332-454)||(13311170-13311293)
chr5 (331-458)||(23914835-23914964)
chr5 (332-458)||(15712138-15712266)
chr5 (332-458)||(19531318-19531446)
chr5 (341-458)||(11262332-11262451)
chr5 (332-432)||(8961214-8961316)
chr5 (331-443)||(26300105-26300219)
chr5 (13-87)||(31706356-31706430)
chr5 (332-458)||(38835542-38835671)
chr5 (331-432)||(13157327-13157430)
chr5 (383-458)||(43446876-43446951)
chr5 (344-443)||(37870024-37870125)
chr5 (377-432)||(21945423-21945478)
chr5 (210-308)||(15965795-15965893)
chr5 (339-429)||(35969175-35969267)
chr5 (329-458)||(19531293-19531424)
chr5 (376-432)||(35172473-35172529)
chr5 (230-308)||(4462577-4462655)
chr5 (332-432)||(5259428-5259530)
chr5 (342-443)||(13157365-13157467)
chr5 (330-409)||(11795729-11795810)
chr5 (376-432)||(15965997-15966053)
chr5 (376-432)||(21152631-21152687)
chr5 (376-432)||(21159766-21159822)
chr5 (376-432)||(21163573-21163629)
chr5 (332-458)||(42013839-42013967)
chr5 (331-443)||(3851395-3851509)
chr5 (343-443)||(20518203-20518305)
chr5 (331-398)||(35969122-35969192)
chr5 (259-308)||(1352387-1352436)
chr5 (376-429)||(14416447-14416500)
chr5 (222-295)||(19366984-19367056)
chr5 (331-458)||(26300128-26300257)
chr5 (376-432)||(7336896-7336952)
chr5 (376-432)||(14064851-14064907)
chr5 (331-397)||(15712115-15712183)
chr5 (228-319)||(1355380-1355471)
chr5 (331-362)||(5259379-5259410)
chr5 (331-362)||(6763812-6763843)
chr5 (331-362)||(23914956-23914987)
chr5 (331-362)||(41180328-41180359)
chr5 (332-362)||(1996842-1996872)
chr5 (332-362)||(1996963-1996993)
chr5 (332-432)||(14153364-14153466)
chr5 (331-361)||(20019864-20019894)
chr5 (330-458)||(25408536-25408666)
chr5 (376-458)||(25408560-25408642)
chr5 (332-362)||(25772149-25772179)
chr5 (331-361)||(25772271-25772301)
chr5 (332-432)||(26141750-26141852)
chr5 (332-362)||(26141870-26141900)
chr5 (374-432)||(26168227-26168285)
chr5 (332-362)||(27314470-27314500)
chr5 (222-308)||(38370534-38370620)
chr5 (231-308)||(9515541-9515617)
chr5 (376-429)||(22565642-22565695)
chr5 (231-317)||(36302158-36302246)
chr5 (331-396)||(13311253-13311320)
chr5 (376-432)||(14571049-14571105)
chr5 (376-432)||(15965999-15966055)
chr5 (376-432)||(15966684-15966740)
chr5 (376-432)||(15966686-15966742)
chr5 (376-432)||(18942029-18942085)
chr5 (376-432)||(30893819-30893875)
chr5 (376-432)||(38860841-38860897)
chr5 (376-432)||(38860843-38860899)
[»] chr1 (93 HSPs)
chr1 (331-443)||(40262500-40262612)
chr1 (331-443)||(6065493-6065607)
chr1 (330-458)||(37734790-37734920)
chr1 (332-458)||(8257960-8258088)
chr1 (331-458)||(48022589-48022718)
chr1 (332-458)||(639794-639922)
chr1 (331-432)||(33604034-33604137)
chr1 (331-443)||(31008253-31008367)
chr1 (332-442)||(27206754-27206866)
chr1 (332-432)||(5856400-5856502)
chr1 (332-458)||(3384240-3384368)
chr1 (377-458)||(35367520-35367601)
chr1 (210-308)||(25129864-25129962)
chr1 (332-443)||(4602676-4602789)
chr1 (332-455)||(15439882-15440007)
chr1 (203-319)||(1609708-1609823)
chr1 (373-443)||(2349788-2349858)
chr1 (372-458)||(34658403-34658489)
chr1 (377-458)||(14418099-14418180)
chr1 (332-458)||(4060166-4060294)
chr1 (331-443)||(2352927-2353041)
chr1 (203-319)||(36995238-36995355)
chr1 (328-406)||(17490479-17490559)
chr1 (331-432)||(39216146-39216245)
chr1 (331-458)||(45115187-45115316)
chr1 (327-432)||(6283525-6283632)
chr1 (331-396)||(31008338-31008405)
chr1 (331-399)||(23944031-23944101)
chr1 (331-391)||(27206843-27206905)
chr1 (222-319)||(2748566-2748663)
chr1 (332-443)||(3384218-3384331)
chr1 (332-458)||(34953891-34954019)
chr1 (331-397)||(6065455-6065523)
chr1 (332-458)||(8257938-8258066)
chr1 (214-308)||(8472364-8472455)
chr1 (376-432)||(31909790-31909846)
chr1 (376-432)||(52253581-52253637)
chr1 (332-397)||(35367556-35367623)
chr1 (331-432)||(36040189-36040292)
chr1 (332-432)||(1035930-1036032)
chr1 (45-87)||(15259494-15259536)
chr1 (203-273)||(15646912-15646982)
chr1 (259-316)||(26724339-26724396)
chr1 (259-316)||(26732456-26732513)
chr1 (204-309)||(36271192-36271297)
chr1 (331-397)||(14418135-14418203)
chr1 (330-362)||(28725581-28725613)
chr1 (376-432)||(38824334-38824390)
chr1 (376-432)||(47011285-47011341)
chr1 (332-397)||(2349751-2349818)
chr1 (376-443)||(4682969-4683036)
chr1 (331-362)||(29302058-29302089)
chr1 (331-362)||(29302180-29302211)
chr1 (377-432)||(31634434-31634489)
chr1 (331-432)||(33939340-33939443)
chr1 (331-362)||(36040140-36040171)
chr1 (331-362)||(41161580-41161611)
chr1 (331-362)||(48022710-48022741)
chr1 (332-362)||(639914-639944)
chr1 (332-362)||(4060286-4060316)
chr1 (374-432)||(5852731-5852789)
chr1 (376-458)||(15351732-15351814)
chr1 (224-317)||(18407466-18407557)
chr1 (332-362)||(23575312-23575342)
chr1 (332-362)||(28725461-28725491)
chr1 (332-362)||(33939292-33939322)
chr1 (374-432)||(46517984-46518042)
chr1 (413-458)||(2352973-2353018)
chr1 (276-317)||(15647258-15647299)
chr1 (413-458)||(23944054-23944099)
chr1 (376-429)||(24478706-24478759)
chr1 (376-425)||(34953946-34953995)
chr1 (376-449)||(43384524-43384597)
chr1 (383-427)||(8465974-8466018)
chr1 (376-432)||(8751473-8751529)
chr1 (330-362)||(14214543-14214575)
chr1 (331-363)||(14214643-14214675)
chr1 (376-432)||(15278606-15278662)
chr1 (376-432)||(15278608-15278664)
chr1 (381-417)||(21321376-21321412)
chr1 (376-432)||(23575361-23575417)
chr1 (376-432)||(25378300-25378356)
chr1 (376-432)||(27549086-27549142)
chr1 (376-432)||(31909792-31909848)
chr1 (380-432)||(33738208-33738260)
chr1 (376-432)||(35049973-35050029)
chr1 (376-432)||(37255167-37255223)
chr1 (376-432)||(38847343-38847399)
chr1 (376-432)||(39015604-39015660)
chr1 (331-397)||(40262462-40262530)
chr1 (250-302)||(44698067-44698119)
chr1 (349-432)||(45925257-45925341)
chr1 (376-432)||(48605111-48605167)
[»] chr2 (62 HSPs)
chr2 (332-458)||(43426623-43426751)
chr2 (331-458)||(38594338-38594467)
chr2 (331-458)||(38597934-38598063)
chr2 (331-432)||(5574153-5574256)
chr2 (209-319)||(32838637-32838747)
chr2 (331-443)||(1980979-1981092)
chr2 (202-315)||(19002758-19002871)
chr2 (343-458)||(30902290-30902407)
chr2 (330-458)||(22373627-22373758)
chr2 (329-443)||(34248407-34248523)
chr2 (330-443)||(3887826-3887941)
chr2 (331-458)||(25278191-25278320)
chr2 (358-457)||(3714235-3714335)
chr2 (210-308)||(41252763-41252862)
chr2 (332-442)||(6566910-6567022)
chr2 (337-443)||(20504243-20504351)
chr2 (383-454)||(38618146-38618217)
chr2 (332-458)||(3887850-3887978)
chr2 (332-427)||(19950112-19950209)
chr2 (210-268)||(33847488-33847546)
chr2 (331-391)||(34248499-34248561)
chr2 (209-294)||(752182-752267)
chr2 (330-397)||(38598018-38598087)
chr2 (227-319)||(1388480-1388572)
chr2 (376-432)||(4898208-4898264)
chr2 (376-432)||(4945602-4945658)
chr2 (328-458)||(38181777-38181909)
chr2 (331-397)||(38594422-38594490)
chr2 (380-443)||(7837117-7837180)
chr2 (331-432)||(24457143-24457246)
chr2 (258-313)||(38721626-38721681)
chr2 (335-458)||(5574108-5574233)
chr2 (376-429)||(10041588-10041641)
chr2 (329-432)||(26234067-26234172)
chr2 (331-425)||(37195046-37195142)
chr2 (224-316)||(4640196-4640288)
chr2 (337-391)||(6566999-6567055)
chr2 (331-432)||(19612935-19613038)
chr2 (376-432)||(20195332-20195388)
chr2 (330-362)||(24457093-24457125)
chr2 (330-362)||(26234017-26234049)
chr2 (331-362)||(2060198-2060229)
chr2 (331-362)||(2060617-2060648)
chr2 (331-432)||(8740513-8740616)
chr2 (332-458)||(11726491-11726618)
chr2 (376-458)||(21488068-21488150)
chr2 (396-425)||(4563925-4563954)
chr2 (376-429)||(10099598-10099651)
chr2 (376-425)||(11153246-11153295)
chr2 (376-425)||(26003485-26003534)
chr2 (376-449)||(34911124-34911197)
chr2 (376-432)||(5144311-5144367)
chr2 (376-432)||(9709701-9709757)
chr2 (241-273)||(11477054-11477086)
chr2 (376-432)||(12440673-12440729)
chr2 (376-432)||(17843994-17844050)
chr2 (326-362)||(26229435-26229471)
chr2 (376-432)||(29712530-29712585)
chr2 (376-432)||(37396247-37396303)
chr2 (330-362)||(38465782-38465814)
chr2 (267-319)||(40349639-40349691)
chr2 (376-432)||(43514799-43514855)
[»] chr7 (83 HSPs)
chr7 (331-458)||(38238777-38238907)
chr7 (331-458)||(34703460-34703589)
chr7 (332-443)||(25079202-25079315)
chr7 (338-458)||(40416923-40417045)
chr7 (343-454)||(1706854-1706967)
chr7 (332-458)||(45000618-45000746)
chr7 (342-443)||(22106672-22106775)
chr7 (342-443)||(40529576-40529679)
chr7 (330-458)||(29498776-29498906)
chr7 (342-427)||(4406422-4406509)
chr7 (209-307)||(23828904-23829002)
chr7 (210-308)||(38912906-38913004)
chr7 (373-458)||(27554535-27554620)
chr7 (202-317)||(5909067-5909182)
chr7 (372-443)||(22281475-22281546)
chr7 (209-308)||(25874360-25874459)
chr7 (373-443)||(716266-716336)
chr7 (332-432)||(24936576-24936678)
chr7 (199-316)||(21275621-21275738)
chr7 (331-454)||(27554518-27554643)
chr7 (227-319)||(34963375-34963467)
chr7 (209-319)||(7728582-7728692)
chr7 (331-443)||(38238816-38238930)
chr7 (204-316)||(40037716-40037827)
chr7 (337-458)||(21387576-21387699)
chr7 (330-458)||(25079224-25079354)
chr7 (332-458)||(14995860-14995988)
chr7 (402-455)||(18234412-18234465)
chr7 (331-432)||(34275234-34275338)
chr7 (332-458)||(40416901-40417029)
chr7 (335-397)||(46943942-46944006)
chr7 (331-432)||(10414933-10415036)
chr7 (248-319)||(16831275-16831346)
chr7 (330-427)||(24935885-24935984)
chr7 (376-458)||(2533957-2534039)
chr7 (277-319)||(18662319-18662361)
chr7 (203-269)||(18662356-18662422)
chr7 (330-458)||(22106684-22106814)
chr7 (330-458)||(40529537-40529667)
chr7 (259-317)||(46683064-46683122)
chr7 (226-319)||(46096747-46096840)
chr7 (376-432)||(3498337-3498393)
chr7 (376-432)||(27242457-27242513)
chr7 (376-432)||(28003219-28003275)
chr7 (376-432)||(37066223-37066279)
chr7 (259-319)||(38663682-38663742)
chr7 (376-432)||(46477176-46477232)
chr7 (403-443)||(46943976-46944016)
chr7 (331-362)||(2297325-2297356)
chr7 (331-362)||(2360443-2360474)
chr7 (332-432)||(4406122-4406224)
chr7 (14-85)||(4609583-4609654)
chr7 (331-432)||(6455543-6455646)
chr7 (331-362)||(8595262-8595293)
chr7 (331-362)||(10422923-10422954)
chr7 (330-458)||(15051100-15051230)
chr7 (330-361)||(16777885-16777916)
chr7 (327-362)||(34275181-34275216)
chr7 (327-362)||(43103062-43103097)
chr7 (412-458)||(716311-716357)
chr7 (379-425)||(7295100-7295146)
chr7 (332-362)||(8447712-8447742)
chr7 (332-362)||(8571497-8571527)
chr7 (332-362)||(28949390-28949420)
chr7 (255-317)||(42589694-42589756)
chr7 (331-361)||(46648743-46648773)
chr7 (276-310)||(49111259-49111293)
chr7 (259-308)||(8566261-8566310)
chr7 (332-361)||(8571377-8571406)
chr7 (383-432)||(28949323-28949372)
chr7 (376-449)||(33471516-33471589)
chr7 (331-381)||(4407713-4407765)
chr7 (330-362)||(6455664-6455696)
chr7 (376-432)||(19531994-19532050)
chr7 (376-432)||(26385668-26385724)
chr7 (330-362)||(26824899-26824931)
chr7 (209-273)||(26980244-26980308)
chr7 (376-432)||(30005917-30005973)
chr7 (376-432)||(33471531-33471587)
chr7 (203-255)||(36595367-36595419)
chr7 (376-432)||(37066225-37066281)
chr7 (209-308)||(46152239-46152336)
chr7 (376-432)||(46221121-46221177)
[»] chr3 (75 HSPs)
chr3 (331-458)||(51239237-51239366)
chr3 (332-458)||(36362599-36362727)
chr3 (330-443)||(51617363-51617478)
chr3 (331-443)||(52931635-52931749)
chr3 (332-432)||(21403939-21404039)
chr3 (331-455)||(38455159-38455285)
chr3 (332-432)||(41349703-41349806)
chr3 (331-432)||(50260927-50261030)
chr3 (331-458)||(29565126-29565255)
chr3 (332-455)||(42449100-42449225)
chr3 (331-458)||(52168300-52168429)
chr3 (347-443)||(52315400-52315498)
chr3 (335-432)||(29720119-29720218)
chr3 (332-443)||(29512163-29512276)
chr3 (210-296)||(1402014-1402100)
chr3 (13-87)||(4741093-4741168)
chr3 (331-443)||(33412497-33412611)
chr3 (372-432)||(17552520-17552580)
chr3 (331-443)||(33412460-33412573)
chr3 (209-319)||(45153502-45153612)
chr3 (374-443)||(22099811-22099880)
chr3 (373-458)||(22173812-22173897)
chr3 (214-319)||(31437802-31437906)
chr3 (209-316)||(44720854-44720961)
chr3 (330-458)||(12744894-12745024)
chr3 (209-319)||(23070829-23070939)
chr3 (329-397)||(51617323-51617393)
chr3 (381-454)||(32759012-32759085)
chr3 (329-443)||(52315422-52315538)
chr3 (376-458)||(7981186-7981268)
chr3 (332-432)||(25881131-25881233)
chr3 (331-425)||(10872722-10872818)
chr3 (381-454)||(37492402-37492475)
chr3 (332-443)||(41349655-41349768)
chr3 (331-397)||(51239321-51239389)
chr3 (224-319)||(23073658-23073753)
chr3 (330-397)||(17552470-17552539)
chr3 (263-319)||(4204051-4204107)
chr3 (376-432)||(16127789-16127845)
chr3 (376-432)||(21659181-21659237)
chr3 (332-397)||(29565104-29565171)
chr3 (330-362)||(50261049-50261081)
chr3 (332-398)||(52168278-52168346)
chr3 (332-432)||(8439301-8439403)
chr3 (376-432)||(17005001-17005059)
chr3 (376-443)||(26121580-26121647)
chr3 (376-443)||(26244421-26244488)
chr3 (376-443)||(34935579-34935646)
chr3 (331-362)||(38677680-38677711)
chr3 (196-319)||(52685097-52685220)
chr3 (332-397)||(52931751-52931818)
chr3 (377-443)||(4181973-4182039)
chr3 (209-319)||(23057092-23057202)
chr3 (332-362)||(25881251-25881281)
chr3 (332-432)||(38677560-38677662)
chr3 (203-273)||(40696114-40696184)
chr3 (376-410)||(53683848-53683882)
chr3 (259-317)||(54987249-54987307)
chr3 (376-425)||(3020664-3020713)
chr3 (329-362)||(5919424-5919457)
chr3 (413-458)||(18940047-18940092)
chr3 (413-458)||(29512209-29512254)
chr3 (330-397)||(36362682-36362750)
chr3 (376-425)||(40065371-40065420)
chr3 (332-361)||(40470534-40470563)
chr3 (251-308)||(48600645-48600702)
chr3 (376-432)||(1043966-1044022)
chr3 (332-390)||(29720071-29720131)
chr3 (376-432)||(39530436-39530492)
chr3 (376-432)||(39530438-39530494)
chr3 (376-432)||(40326479-40326535)
chr3 (376-428)||(42595784-42595836)
chr3 (376-432)||(44435217-44435273)
chr3 (376-432)||(52638076-52638132)
chr3 (376-432)||(54680532-54680588)
[»] scaffold0024 (2 HSPs)
scaffold0024 (327-458)||(120135-120268)
scaffold0024 (331-443)||(120177-120291)
[»] scaffold0536 (1 HSPs)
scaffold0536 (332-458)||(3945-4073)
[»] chr6 (42 HSPs)
chr6 (329-443)||(30397717-30397832)
chr6 (332-458)||(17773496-17773624)
chr6 (331-458)||(21998033-21998162)
chr6 (330-458)||(21506456-21506586)
chr6 (332-443)||(21506495-21506608)
chr6 (333-440)||(30460648-30460757)
chr6 (331-458)||(28577595-28577724)
chr6 (372-432)||(17268050-17268110)
chr6 (331-458)||(31536305-31536437)
chr6 (330-443)||(17773533-17773648)
chr6 (249-319)||(30456799-30456869)
chr6 (332-458)||(21998056-21998184)
chr6 (203-319)||(33605057-33605173)
chr6 (332-443)||(30397757-30397869)
chr6 (42-87)||(9200878-9200923)
chr6 (332-458)||(14310516-14310644)
chr6 (331-432)||(8145992-8146095)
chr6 (230-308)||(3686811-3686889)
chr6 (332-432)||(6560700-6560802)
chr6 (230-316)||(10228329-10228414)
chr6 (339-458)||(30460615-30460736)
chr6 (376-432)||(6047999-6048055)
chr6 (330-362)||(6560650-6560682)
chr6 (202-286)||(8082495-8082579)
chr6 (332-458)||(8449591-8449721)
chr6 (332-458)||(8458395-8458525)
chr6 (332-401)||(4844284-4844355)
chr6 (376-458)||(3012401-3012483)
chr6 (378-432)||(3212284-3212338)
chr6 (332-362)||(8145943-8145973)
chr6 (332-362)||(14310636-14310666)
chr6 (332-362)||(31398221-31398251)
chr6 (332-432)||(31398269-31398371)
chr6 (376-453)||(15467614-15467691)
chr6 (376-432)||(2033210-2033266)
chr6 (376-432)||(7418918-7418974)
chr6 (376-432)||(10731514-10731570)
chr6 (376-432)||(10731516-10731572)
chr6 (376-432)||(12349858-12349914)
chr6 (330-362)||(18097175-18097207)
chr6 (376-432)||(21478594-21478650)
chr6 (376-432)||(21478596-21478652)
[»] chr4 (63 HSPs)
chr4 (332-458)||(13689553-13689681)
chr4 (332-458)||(52817584-52817712)
chr4 (332-457)||(5418533-5418660)
chr4 (342-457)||(24941116-24941233)
chr4 (210-308)||(41899075-41899173)
chr4 (330-418)||(5281192-5281282)
chr4 (214-308)||(5168521-5168615)
chr4 (224-317)||(8839684-8839775)
chr4 (377-443)||(10031563-10031629)
chr4 (373-458)||(38539495-38539580)
chr4 (327-410)||(55087776-55087861)
chr4 (203-309)||(38868831-38868937)
chr4 (332-432)||(56328493-56328595)
chr4 (331-427)||(14450951-14451049)
chr4 (373-462)||(6243638-6243727)
chr4 (331-458)||(19934632-19934761)
chr4 (331-458)||(29006852-29006981)
chr4 (376-425)||(40881477-40881526)
chr4 (332-415)||(44156060-44156145)
chr4 (331-458)||(54164807-54164936)
chr4 (263-319)||(3167167-3167223)
chr4 (376-432)||(20542846-20542902)
chr4 (376-432)||(42013187-42013243)
chr4 (376-432)||(51126146-51126202)
chr4 (376-432)||(52281161-52281217)
chr4 (376-443)||(4406273-4406340)
chr4 (332-432)||(21884062-21884164)
chr4 (403-458)||(29223959-29224014)
chr4 (209-287)||(42563388-42563467)
chr4 (237-307)||(3784073-3784143)
chr4 (249-319)||(6167846-6167916)
chr4 (377-425)||(48603606-48603654)
chr4 (376-432)||(51126148-51126204)
chr4 (377-432)||(3517105-3517160)
chr4 (327-362)||(6126767-6126802)
chr4 (331-362)||(21884012-21884043)
chr4 (330-361)||(28702177-28702208)
chr4 (331-362)||(49481995-49482026)
chr4 (331-362)||(56328443-56328474)
chr4 (250-308)||(6317015-6317073)
chr4 (376-458)||(21586935-21587017)
chr4 (331-361)||(28702055-28702085)
chr4 (376-425)||(4484115-4484164)
chr4 (376-429)||(16391473-16391526)
chr4 (204-273)||(24858618-24858687)
chr4 (376-432)||(4044339-4044395)
chr4 (383-455)||(8826885-8826957)
chr4 (349-432)||(9011788-9011872)
chr4 (376-432)||(13743899-13743955)
chr4 (377-425)||(18626757-18626805)
chr4 (376-432)||(21003981-21004037)
chr4 (377-425)||(22493618-22493666)
chr4 (376-432)||(23329413-23329469)
chr4 (376-432)||(23710876-23710932)
chr4 (376-432)||(23754235-23754291)
chr4 (376-432)||(24529614-24529670)
chr4 (376-432)||(24529616-24529672)
chr4 (376-432)||(29978533-29978589)
chr4 (376-432)||(32112357-32112413)
chr4 (376-432)||(49481921-49481977)
chr4 (376-432)||(49745506-49745562)
chr4 (240-316)||(53333557-53333633)
chr4 (330-362)||(54164928-54164960)
[»] scaffold0047 (2 HSPs)
scaffold0047 (332-443)||(61195-61307)
scaffold0047 (330-443)||(61156-61270)
[»] scaffold0039 (2 HSPs)
scaffold0039 (332-458)||(54405-54533)
scaffold0039 (331-391)||(54382-54444)
[»] scaffold0007 (2 HSPs)
scaffold0007 (330-458)||(246788-246918)
scaffold0007 (331-458)||(246812-246941)
[»] scaffold0016 (1 HSPs)
scaffold0016 (214-319)||(79968-80073)
[»] scaffold0027 (2 HSPs)
scaffold0027 (338-443)||(17198-17306)
scaffold0027 (331-397)||(17161-17228)
[»] scaffold0050 (1 HSPs)
scaffold0050 (330-432)||(6206-6310)
[»] scaffold0635 (1 HSPs)
scaffold0635 (376-429)||(5429-5482)
[»] scaffold0172 (2 HSPs)
scaffold0172 (376-432)||(11625-11681)
scaffold0172 (376-432)||(11627-11683)
[»] scaffold0009 (1 HSPs)
scaffold0009 (329-458)||(7674-7805)
[»] scaffold0268 (1 HSPs)
scaffold0268 (226-316)||(19123-19213)
[»] scaffold0036 (1 HSPs)
scaffold0036 (377-443)||(89630-89696)
[»] scaffold0650 (1 HSPs)
scaffold0650 (101-141)||(1627-1667)
[»] scaffold0121 (1 HSPs)
scaffold0121 (376-432)||(17475-17531)
[»] scaffold0111 (1 HSPs)
scaffold0111 (376-432)||(38050-38106)


Alignment Details
Target: scaffold0236 (Bit Score: 270; Significance: 1e-150; HSPs: 2)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 13 - 330
Target Start/End: Original strand, 19956 - 20272
Alignment:
Q  13 aatatttacaatagttgcctgaacagagcataaaaacagaaaagaaactcttatcctatgcccaatatggtaaacttgtgtgatttaatgaggaacaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||    
T  19956 aatatttacaatagttgcctgaacagagcataaaaacagaaaagaaactcttagtctatgcc-aatatggtaaacttgtgtgatttaatgagggacaaaa 20054  T
Q  113 atttcagtttctgtcttgtctcttgcctctacgtttatcaattttacaataaaacaaaataaacagttgttttacccctccctcttagaacacttattaa 212  Q
    |||||||   ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20055 atttcagcccctgtcttgtctcttgcctccacgtttatcagttttacaataaaacaaaataaacagttgttttacccctcccccttagaacacttattaa 20154  T
Q  213 gaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcat 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20155 gaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaaaataactttttctacttaaaatttatcaactattttcat 20254  T
Q  313 ttttgtagtagcttaata 330  Q
    ||||||||||||||||||    
T  20255 ttttgtagtagcttaata 20272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 460 - 516
Target Start/End: Original strand, 20541 - 20597
Alignment:
Q  460 agcaataccctttattttttgtagcaaatcaaacgggtgaataatatttagggttgt 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20541 agcaataccctttattttttgtagcaaatcaaacgggtgaataatatttggggttgt 20597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 40098906 - 40098777
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  40098906 atacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaat 40098807  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  |||||||||  || ||||||||||    
T  40098806 tgaatgtatctaaaaagtagatttttgctt 40098777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 332 - 443
Target Start/End: Original strand, 14381233 - 14381346
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  14381233 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatatcacatacatcattaatt 14381332  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  14381333 gaatgtatctaaaa 14381346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 9056166 - 9056038
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||||||||  |||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9056166 tacaccctccggtcactaatataagcaaaaattcactttttagatacatttaattaatgatgtatgtggtctttattatatgtcacatacatcattaatt 9056067  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  | |||||||||||    
T  9056066 gaatgtatctaaaaagtgaatttttgctt 9056038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 332 - 443
Target Start/End: Original strand, 7377549 - 7377662
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||| ||||||||||  ||||||||||||  |||| |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  7377549 tacaccatccggtcactggtataagcaaaaattcactttttagatacattcaattaatgatgtatgtgggctttattatatgtcacatacatcattaatt 7377648  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  7377649 gaatgtatctaaaa 7377662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 431
Target Start/End: Original strand, 26014574 - 26014665
Alignment:
Q  342 ggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattga 431  Q
    |||||||||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  26014574 ggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacattattaattga 26014665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 335 - 432
Target Start/End: Original strand, 11692046 - 11692144
Alignment:
Q  335 accctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||||||||| |||||| ||||| |||| | ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  11692046 accctccggtcactaatataaacaaaaatccactttttagacacatt-aattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaa 11692144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 29451869 - 29451762
Alignment:
Q  338 ctccggtcactaatataagcaaaaa-ccactcttt----aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||| ||||||||||||||||||| ||| | |||    |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||    
T  29451869 ctccgatcactaatataagcaaaaatccatttttttttaaatacattcaattaataatgtatgtggtcttaattatatgtcacatacatcattaattgaa 29451770  T
Q  433 aatatcta 440  Q
     |||||||    
T  29451769 tatatcta 29451762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 13211277 - 13211358
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaattttt 454  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||    
T  13211277 atacatttaattaatgatatatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaaatagattttt 13211358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 13228972 - 13228913
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  13228972 atacatttaattaatgatgtatgtggtctttattatatgtcacatatatcattaattgaa 13228913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 44814057 - 44814165
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||||||| |||||||||||||||||| ||||| | ||||||  | |||||||||||||||   |||  ||||||||||||||||||||| |||||    
T  44814057 ttaagaagactaaagaagaaattttgtcttgaaaatggtgcattca--acattgaaactttaaaatgcaaccctttctacttaaaatttatcaattattt 44814154  T
Q  309 tcatttttgta 319  Q
      |||||||||    
T  44814155 ctatttttgta 44814165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 454
Target Start/End: Complemental strand, 15285756 - 15285674
Alignment:
Q  372 aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaattttt 454  Q
    ||||||||||||||| |||| || | |||||||||||||||||||||||||||||||| ||  ||| ||||| ||||||||||    
T  15285756 aatacattcaattaaggatgtatatagtctttattatatgtcacatacatcattaattaaatgtatttaaaaaataaattttt 15285674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 454
Target Start/End: Complemental strand, 15466125 - 15466043
Alignment:
Q  372 aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaattttt 454  Q
    ||||||||||||||| |||| || | |||||||||||||||||||||||||||||||| ||  ||| ||||| ||||||||||    
T  15466125 aatacattcaattaaggatgtatatagtctttattatatgtcacatacatcattaattaaatgtatttaaaaaataaattttt 15466043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 418
Target Start/End: Complemental strand, 33574930 - 33574845
Alignment:
Q  334 caccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacata 418  Q
    |||||||||||||||||||||| |||||| ||||  |||| ||||||||||||||||||| |||||| |||||||||||||||||||    
T  33574930 caccctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtatgtgg-ctttattatatgtcacata 33574845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 37716120 - 37716193
Alignment:
Q  381 aattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaattttt 454  Q
    ||||||||||  |||| ||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||    
T  37716120 aattaatgatatatgtagtctttattatatatcacatacatcattaattgaatgtatctaaaaaataaattttt 37716193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 42631687 - 42631776
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaattta 298  Q
    |||||||| ||| |||| ||||||||||||| ||||| | ||||||||  ||| |||||||||||| ||| |||||||||||||||||||    
T  42631687 ttaagaagtctaaagaataaattttgtcttgaaaatggtgcattcaatgcattaaaactttaaaaggtaattttttctacttaaaattta 42631776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 40098750 - 40098868
Alignment:
Q  327 aataatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcat 424  Q
    |||||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||  |||||   | || || |   ||||||||||||    
T  40098750 aataatacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatatatgtgacatataataaagaccacatacatcat 40098849  T
Q  425 taattgaaaatatctaaaa 443  Q
    ||||||||  |||||||||    
T  40098850 taattgaatgtatctaaaa 40098868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 14381383 - 14381270
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| ||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||| ||||| | | || || |   |||||||||||||||||    
T  14381383 tacatcctccggtcactaatataaacaaaaatccactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcattaatt 14381284  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  14381283 gaatgtatctaaaa 14381270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 34496999 - 34496889
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||||  || |||||||||||||||||| |||| ||  |||||||  |||||||||||| ||  |||  |||| ||||||||||||| ||| |||||    
T  34496999 ttaagaagtttaaagaagaaattttgtcttgtaaattatgtattcaatgcattgaaactttataaagtaatattttatacttaaaatttaccaattattt 34496900  T
Q  309 tcatttttgta 319  Q
     ||||||||||    
T  34496899 ccatttttgta 34496889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 9056015 - 9056144
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||| ||||||||||||||  |||| |||| ||||||||||||||||||| |||||   | || || |   ||||||||||||||||    
T  9056015 atacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaat 9056114  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    | ||  |||||||||  | |||||||||||    
T  9056115 taaatgtatctaaaaagtgaatttttgctt 9056144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 432
Target Start/End: Original strand, 31505031 - 31505135
Alignment:
Q  330 aatacaccctccggtcactaatataagc-aaaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||||||||||||||||||||||||||| |||||| ||  ||||  | |||||| |||||||||||  | ||||||||||||   |||||||||||||||    
T  31505031 aatacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaa 31505130  T
Q  428 ttgaa 432  Q
     ||||    
T  31505131 atgaa 31505135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 455
Target Start/End: Complemental strand, 9808474 - 9808394
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttg 455  Q
    ||||||| ||||||| ||| |||||||||||||||||  ||||||||| |||||||||||  ||| |||||  ||||||||||    
T  9808474 atacatttaattaattatgtatgtggtctttattata--tcacatacaccattaattgaatgtatataaaaagtaaatttttg 9808394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 1739634 - 1739688
Alignment:
Q  404 attatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||| |||||||||||||||||||  |||||||||  |||||||||||||    
T  1739634 attatatgttacatacatcattaattgaatgtatctaaaaagtaaatttttgctt 1739688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 1739710 - 1739644
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgt 396  Q
    |||||||||||||||||||||||||||||||   ||| |||| ||||||||||||||||||| ||||    
T  1739710 tacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgt 1739644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 10467136 - 10467176
Alignment:
Q  101 tgaggaacaaaaatttcagtttctgtcttgtctcttgcctc 141  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  10467136 tgaggaacaaaaatatcagtttttgtcttgtctcttgcctc 10467176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 11295658 - 11295738
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacca-ctcttta-atacattcaattaatgatgcatgtggtctttattata 409  Q
    ||||||| ||||||||||| |||||||||||| || |  |||| ||||||||| | ||||||| |||||||||||||||||    
T  11295658 atacaccttccggtcactattataagcaaaaatcaacattttagatacattcattaaatgatgtatgtggtctttattata 11295738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 27781925 - 27781981
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  27781925 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 27781981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 31810481 - 31810449
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||||    
T  31810481 aatacaccctccggtcactaatataagcaaaaa 31810449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 41178057 - 41178001
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||||||||||| | ||||||    ||||||||||||||||||||    
T  41178057 cattcaattaatgatgcatgtggtttatattatggaccacatacatcattaattgaa 41178001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 42149225 - 42149169
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| || |||||| || ||||  |||||||||||||||||||||    
T  42149225 cattcaattaatgatgtatatggtctctaatataaatcacatacatcattaattgaa 42149169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 42631878 - 42631822
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  42631878 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 42631822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 31505184 - 31505153
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  31505184 atacaccctccggtcactaatataagcaaaaa 31505153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 41061227 - 41061298
Alignment:
Q  227 aaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaattta 298  Q
    ||||||||||||  ||||  |||||| || ||||| ||||||||||| ||||| ||||||||||||| ||||    
T  41061227 aaattttgtcttaaaaattgtacatttaacatattaaaactttaaaaaataaccttttctacttaaatttta 41061298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 1744227 - 1744257
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  1744227 tacaccctccggtcactaatataagcaaaaa 1744257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 10117011 - 10117093
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||| | ||||||| ||||||||| || || || ||| |||||||||||||||||   ||||||||  |||||||||||||    
T  10117011 cattcattaaatgatgtatgtggtctataataaatatcatatacatcattaattgaatgaatctaaaatgtaaatttttgctt 10117093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 24053592 - 24053622
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  24053592 tacaccctccggtcactaatataagcaaaaa 24053622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 24053696 - 24053614
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||| |||||||||||  ||||||||||||||   ||||||||||||||| ||||   | |||||| |||| |||||||||    
T  24053696 cattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaaatataattttttgctt 24053614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 409
Target Start/End: Complemental strand, 7258684 - 7258651
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattata 409  Q
    ||||||||||||||||||| ||||||||||||||    
T  7258684 cattcaattaatgatgcatatggtctttattata 7258651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 13228864 - 13228925
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttt-aatacattcaattaatgat 390  Q
    ||||||||| ||||||||||||||| |||||| ||| | ||| |||||||||||||||||||    
T  13228864 atacacccttcggtcactaatataaacaaaaatccattttttaaatacattcaattaatgat 13228925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 430
Target Start/End: Original strand, 13271735 - 13271788
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattg 430  Q
    |||||||||||||||||||| || | |||||||  ||||||| |||||||||||    
T  13271735 attcaattaatgatgcatgtagtttatattataaatcacatatatcattaattg 13271788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 13496427 - 13496460
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||| ||||||||||||||||||||||||    
T  13496427 taatacaccatccggtcactaatataagcaaaaa 13496460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 3611810 - 3611866
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   |||||||   ||||||||||||||||||||    
T  3611810 cattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaa 3611866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 3611868 - 3611812
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || |||    ||||||||||||||||||||    
T  3611868 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 3611812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 8568861 - 8568917
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || |||    ||||||||||||||||||||    
T  8568861 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 8568917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 8568919 - 8568863
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   |||||||   ||||||||||||||||||||    
T  8568919 cattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaa 8568863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 14955315 - 14955259
Alignment:
Q  230 ttttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttct 286  Q
    |||| ||||||||||||| ||||||| | ||||||| |||||||  |||||||||||    
T  14955315 ttttatcttggaaatgatgcattcaacacattgaaagtttaaaaagtaactttttct 14955259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 34326344 - 34326288
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| || | ||||||||||||    |||||||||||||||||||    
T  34326344 cattcaattaatgatgtatatagtctttattataaacaacatacatcattaattgaa 34326288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 38884045 - 38883989
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||| |||  |||||||   ||||||||||||||||||||    
T  38884045 cattcaattaatgatgtatgttgtccatattataaaccacatacatcattaattgaa 38883989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 39655458 - 39655514
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  39655458 cattcaattaatgatgtatgtggtccatattatggaccacatacatcattaattgaa 39655514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 3851357 - 3851486
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3851357 atacaccctccgatcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaat 3851456  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    | ||  ||||||||| || |||||||||||    
T  3851457 taaatgtatctaaaaaatgaatttttgctt 3851486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 37944597 - 37944725
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| ||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  37944597 tacatcctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaatt 37944696  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  ||||||||| ||||||||||||||    
T  37944697 gaatgtatctaaaaaataaatttttgctt 37944725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 335 - 458
Target Start/End: Original strand, 42013820 - 42013945
Alignment:
Q  335 accctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42013820 accctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaa 42013919  T
Q  433 aatatctaaaagataaatttttgctt 458  Q
      |||||||||  | |||||||||||    
T  42013920 tgtatctaaaaagtgaatttttgctt 42013945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 332 - 454
Target Start/End: Original strand, 13311170 - 13311293
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actctttaatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattg 430  Q
    ||||||||||||||||||||||||||||||  | ||| ||  ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  13311170 tacaccctccggtcactaatataagcaaaagtctacttttagatacattcaattaatgatgtatgtggtctttattatatgttacatacatcattaattg 13311269  T
Q  431 aaaatatctaaaagataaattttt 454  Q
    ||  ||||||||||||| ||||||    
T  13311270 aatgtatctaaaagatagattttt 13311293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 23914835 - 23914964
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  23914835 atacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaa 23914934  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  ||||| |||  | |||||||||||    
T  23914935 tgaatgtatcttaaaagtgaatttttgctt 23914964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 15712266 - 15712138
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacca-ctctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||| ||| ||||||||||||||| || || ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15712266 tacaccctccgatcattaatataagcaaaaatcaactttttaaatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaatt 15712167  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  ||||||||| ||  ||||||||||    
T  15712166 gaatgtatctaaaaaatggatttttgctt 15712138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 19531446 - 19531318
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| |||||| |||||||||||||||||||  |||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19531446 tacatcctccgatcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaatt 19531347  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  | |||||||||||    
T  19531346 gaatgtatctaaaaagtgaatttttgctt 19531318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 341 - 458
Target Start/End: Original strand, 11262332 - 11262451
Alignment:
Q  341 cggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatc 438  Q
    ||||||||||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||    
T  11262332 cggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatc 11262431  T
Q  439 taaaagataaatttttgctt 458  Q
    || || || |||||||||||    
T  11262432 tacaaaatgaatttttgctt 11262451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 332 - 432
Target Start/End: Original strand, 8961214 - 8961316
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  8961214 tacaccctccagtcactaatataagcaaaaattcactctttagatacattcaattaataatgtatgtggtctttattatatgtcacatacatcattaatt 8961313  T
Q  430 gaa 432  Q
    |||    
T  8961314 gaa 8961316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 26300105 - 26300219
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||||||||||||||||   ||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  26300105 atacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtctttattatatgtcatatacatcattaat 26300204  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  26300205 tgaatgtatctaaaa 26300219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 31706356 - 31706430
Alignment:
Q  13 aatatttacaatagttgcctgaacagagcataaaaacagaaaagaaactcttatcctatgcccaatatggtaaac 87  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31706356 aatatttacaatagttgcctgaacaaagcataaaaacagaaaagaaactcttagcctatgcccaatatggtaaac 31706430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 38835671 - 38835542
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac--cactctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||| |||||||||||||||||||||   |||| ||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  38835671 tacaccctctggtcactaatataagcaaaaaattcactttttaaatacattcaattaatgatgtatacggtctttattatatgtcacatacatcattaat 38835572  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    | ||  ||||||||| || |||||||||||    
T  38835571 taaatgtatctaaaaaatgaatttttgctt 38835542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 13157327 - 13157430
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||| |||||||||| ||||||||||||||| ||||| |||| ||| ||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  13157327 atacatcctccggtcattaatataagcaaaaatccactttttagatatattcaattaatgatgtatatggtctttattatatatcacatacatcattaat 13157426  T
Q  429 tgaa 432  Q
    ||||    
T  13157427 tgaa 13157430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 43446951 - 43446876
Alignment:
Q  383 ttaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||||||  |||||||||||||    
T  43446951 ttaatgatgtatgtggtctttattatatgtcacatacatcattaattaaatgtatctaaaaagtaaatttttgctt 43446876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 344 - 443
Target Start/End: Original strand, 37870024 - 37870125
Alignment:
Q  344 tcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaa 441  Q
    ||||||||||||||||||| ||| | |||| |||||||||||||||  || || | |||||||||||||||||||| |||||||||||||| ||||||||    
T  37870024 tcactaatataagcaaaaaaccattttttagatacattcaattaatattgtatatagtctttattatatgtcacattcatcattaattgaatatatctaa 37870123  T
Q  442 aa 443  Q
    ||    
T  37870124 aa 37870125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 377 - 432
Target Start/End: Complemental strand, 21945478 - 21945423
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  21945478 attcaattaatgatgtatctggtctttattatatgtcacatacatcattaattgaa 21945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 15965795 - 15965893
Alignment:
Q  210 taagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||||||| ||||||||| ||||||| |||||| | ||||||||  ||| ||| |||||||  ||||||||||||||||||||| ||||| |||||    
T  15965795 taagaagactaaagaagaaatgttgtcttagaaatggtgcattcaatgcatttaaattttaaaatgtaactttttctacttaaaattcatcaattattt 15965893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 429
Target Start/End: Complemental strand, 35969267 - 35969175
Alignment:
Q  339 tccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| ||||||||||||| |||||  |||| |||| |||||||||||||||| || |||| |||||||||||||| |||||||||||||||||    
T  35969267 tccgatcactaatataagtaaaaattcactttttagatacattcaattaatggtgtatgtagtctttattatatgccacatacatcattaatt 35969175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 329 - 458
Target Start/End: Original strand, 19531293 - 19531424
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatta 426  Q
    ||||||||||||||||||| ||||||||||||||  |||| |||| ||||||||||||||||||| |||||   | || || |   ||||||||||||||    
T  19531293 taatacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcatta 19531392  T
Q  427 attgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||  |||||||||  | |||||||||||    
T  19531393 attgaatgtatctaaaaagtgaatttttgctt 19531424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 35172529 - 35172473
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||    
T  35172529 cattcaattaataatgtatgtggtctatattataggtcacatacatcattaattgaa 35172473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 4462577 - 4462655
Alignment:
Q  230 ttttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||  |||| |||||||| ||||| |||| || |||||    
T  4462577 ttttgtcttggaaatgatgcattcaagatattgaaagtttaaaaagtaacattttctacataaaacttataaattattt 4462655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 5259530 - 5259428
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||||||| | ||  |||| || |||||| |||||||||||  | ||||||||||||   ||||||||||||||| |    
T  5259530 tacaccctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaat 5259431  T
Q  430 gaa 432  Q
    |||    
T  5259430 gaa 5259428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 342 - 443
Target Start/End: Complemental strand, 13157467 - 13157365
Alignment:
Q  342 ggtcactaatataagcaaaaac-cactctttaatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatcta 440  Q
    |||||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||| | | || || |   || ||||||||||||||||| |||||||    
T  13157467 ggtcactaatataagcaaaaattcactttttaaaacattcaattaatgatgtatgtgatatataataaagaccatatacatcattaattgaatatatcta 13157368  T
Q  441 aaa 443  Q
    |||    
T  13157367 aaa 13157365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 409
Target Start/End: Original strand, 11795729 - 11795810
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattata 409  Q
    |||| |||||||||||||||||||||||||||| | ||  |||| || |||||||||||||||| || ||||||||||||||    
T  11795729 aatataccctccggtcactaatataagcaaaaatcaacattttagattcattcaattaatgatgtatatggtctttattata 11795810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 15965997 - 15966053
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| |||||||   ||||||||||||||||||||    
T  15965997 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaa 15966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 21152687 - 21152631
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||  |||||||||||||||||||||    
T  21152687 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaa 21152631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 21159822 - 21159766
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||  |||||||||||||||||||||    
T  21159822 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaa 21159766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 21163629 - 21163573
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||  |||||||||||||||||||||    
T  21163629 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaa 21163573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 42013967 - 42013839
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| ||||||||||| ||||||||||||||  |||| |||| ||||||||||||||||||| |||||   | || || |   |||||||||||||||||    
T  42013967 tacatcctccggtcacaaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 42013868  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  | |||||||||||    
T  42013867 gaatgtatctaaaaagtgaatttttgctt 42013839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 443
Target Start/End: Complemental strand, 3851509 - 3851395
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||||||||||||||||  || | |||| ||||||| ||||||||||| |||||   | || || |   ||||||||||||||||    
T  3851509 atacaccctccggtcactaatataagcaaaaattcattttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaat 3851410  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  3851409 tgaatgtatctaaaa 3851395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 443
Target Start/End: Complemental strand, 20518305 - 20518203
Alignment:
Q  343 gtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatcta 440  Q
    ||||||| |||||||||||| | ||| |||| || |||||| |||||||||||  ||||||||||||||   ||||||||||||||| |||| | |||||    
T  20518305 gtcactattataagcaaaaatctactttttacattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaataaatcta 20518206  T
Q  441 aaa 443  Q
    |||    
T  20518205 aaa 20518203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 35969122 - 35969192
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattc-aattaatgatgcatgtgg 398  Q
    ||||| |||||||||||||||||||||||||| ||||| |||| |||||||| ||||||||||| ||||||    
T  35969122 atacatcctccggtcactaatataagcaaaaatccactttttagatacattcaaattaatgatgtatgtgg 35969192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 1352387 - 1352436
Alignment:
Q  259 attgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||||||||||  ||||||||| ||||||||||||||||| |||||    
T  1352387 attgaaactttaaaatgtaactttttttacttaaaatttatcaattattt 1352436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 14416447 - 14416500
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||| ||||||||  |||||||  ||||||||||||||||||    
T  14416447 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaatt 14416500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 19366984 - 19367056
Alignment:
Q  222 agaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaat 295  Q
    |||||||||||||||||| ||||    ||||||||| |||||||||||||||  |||| |||||||||||||||    
T  19366984 agaagaaattttgtcttgaaaattgagcattcaataaattgaaactttaaaaagtaac-ttttctacttaaaat 19367056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 26300257 - 26300128
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||| ||||    ||| |||| ||||||||||||||||||| || ||   | || || |   ||||||||||||||||    
T  26300257 atacaccctccggtcactaatataagtaaaattttactttttagatacattcaattaatgatgtatatgacatataataaagaccacatacatcattaat 26300158  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  |||||||||  |||||||||||||    
T  26300157 tgaatgtatctaaaaagtaaatttttgctt 26300128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 7336896 - 7336952
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  7336896 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 7336952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 14064851 - 14064907
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||   |||||||||||||||||||||    
T  14064851 cattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaattgaa 14064907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 15712115 - 15712183
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtg 397  Q
    |||||| ||||||||| ||||||||||||||| ||| | |||| ||||||||||||||||||| |||||    
T  15712115 atacactctccggtcattaatataagcaaaaatccattttttagatacattcaattaatgatgtatgtg 15712183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 319
Target Start/End: Original strand, 1355380 - 1355471
Alignment:
Q  228 aattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    |||||||||||| ||||| | |||| | |  ||||||||||| |||  ||| || ||||| |||||||||||||| |||||| |||||||||    
T  1355380 aattttgtcttgaaaatggtgcatttactgcattgaaacttttaaatgtaatttcttctatttaaaatttatcaattatttttatttttgta 1355471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 5259379 - 5259410
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  5259379 atacaccctccggtcactaatataagcaaaaa 5259410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 6763843 - 6763812
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  6763843 atacaccctccggtcactaatataagcaaaaa 6763812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 23914987 - 23914956
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  23914987 atacaccctccggtcactaatataagcaaaaa 23914956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 41180359 - 41180328
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  41180359 atacaccctccggtcactaatataagcaaaaa 41180328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 1996842 - 1996872
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  1996842 tacaccctccggtcactaatataagcaaaaa 1996872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 1996993 - 1996963
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  1996993 tacaccctccggtcactaatataagcaaaaa 1996963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 432
Target Start/End: Original strand, 14153364 - 14153466
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||| || |||||||| |||||||||||| | ||| |||| || |||||| |||||||||||| || |||||||||||   |||||| |||||||| |    
T  14153364 tacaccatctggtcactattataagcaaaaatctactttttatattcattcatttaatgatgcatatgatctttattatagaccacatatatcattaaat 14153463  T
Q  430 gaa 432  Q
    |||    
T  14153464 gaa 14153466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 20019894 - 20019864
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaa 361  Q
    |||||||||||||||||||||||||||||||    
T  20019894 atacaccctccggtcactaatataagcaaaa 20019864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 458
Target Start/End: Original strand, 25408536 - 25408666
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||||||||||||||||| ||||||||||||||  ||   |||| || |||||||| ||||||| |||| ||||  | || |   ||||||||||||| |    
T  25408536 aatacaccctccggtcacaaatataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcattta 25408635  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    |||||   |||||||| ||||||||||||||    
T  25408636 ttgaatgaatctaaaacataaatttttgctt 25408666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 25408642 - 25408560
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||| ||||||| |||||||||||||| ||    |||||||||||| ||||||   |||||||| || |||||||||||    
T  25408642 cattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatctaaaatatgaatttttgctt 25408560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 25772149 - 25772179
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  25772149 tacaccctccggtcactaatataagcaaaaa 25772179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 25772301 - 25772271
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaa 361  Q
    |||||||||||||||||||||||||||||||    
T  25772301 atacaccctccggtcactaatataagcaaaa 25772271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 432
Target Start/End: Original strand, 26141750 - 26141852
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||| |||||||||||    ||  |||| || |||||| |||||||||||  ||||||||||||||   ||||||||||||||| |    
T  26141750 tacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaat 26141849  T
Q  430 gaa 432  Q
    |||    
T  26141850 gaa 26141852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 26141900 - 26141870
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  26141900 tacaccctccggtcactaatataagcaaaaa 26141870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 26168227 - 26168285
Alignment:
Q  374 tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||| |||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  26168227 tacattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 26168285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 27314470 - 27314500
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  27314470 tacaccctccggtcactaatataagcaaaaa 27314500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 38370534 - 38370620
Alignment:
Q  222 agaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||||||||||||| ||||||| |||| |||  ||| ||  ||| |||  ||| ||||||||| ||||||||||||| |||||    
T  38370534 agaagaaattttgtcttgaaaatgatgcattgaatgcatttaagtttttaaaagtaaatttttctacgtaaaatttatcaattattt 38370620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 9515541 - 9515617
Alignment:
Q  231 tttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||||||||| || ||||||||  ||||||||||||||| |  | ||||| ||| ||||||||||||| |||||    
T  9515541 tttgtcttggaaattatgcattcaatgcattgaaactttaaaa-agtattttttttacataaaatttatcaattattt 9515617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Complemental strand, 22565695 - 22565642
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||| ||| ||||| |||||||   |||||||||||||||||    
T  22565695 cattcaattaatgatgtatgcggtctatattataaaccacatacatcattaatt 22565642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 36302158 - 36302246
Alignment:
Q  231 tttgtcttggaaatgatacattcaatatattgaaactttaaaaga--taactttttctacttaaaatttatcaactattttcatttttg 317  Q
    ||||||| |||||| || ||||||||  ||||||| || |||| |  |||||||||||| |||||||||| ||| ||||||| ||||||    
T  36302158 tttgtctcggaaataatgcattcaatgcattgaaatttaaaaaaaaataactttttctatttaaaatttaccaattattttcctttttg 36302246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 396
Target Start/End: Complemental strand, 13311320 - 13311253
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaaccactcttt--aatacattcaattaatgatgcatgt 396  Q
    ||||||||| |||||||||||||||| ||||| |  |||||   ||||||||||||||||||| ||||    
T  13311320 atacacccttcggtcactaatataagtaaaaatctatcttttagatacattcaattaatgatgtatgt 13311253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 14571049 - 14571105
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  14571049 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 14571105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 15966055 - 15965999
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||| | || ||||   ||||||||||||||||||||    
T  15966055 cattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaa 15965999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 15966684 - 15966740
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||| | ||||||    ||||||||||||||||||||    
T  15966684 cattcaattaatgatgtatgtggtttatattatggaccacatacatcattaattgaa 15966740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 15966742 - 15966686
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  || ||||   ||||||||||||||||||||    
T  15966742 cattcaattaatgatgtatgtggtccataatataaaccacatacatcattaattgaa 15966686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 18942085 - 18942029
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| ||||||    || |||||||||||||||||    
T  18942085 cattcaattaatgatgtatgtggtctatattatgaaccatatacatcattaattgaa 18942029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 30893875 - 30893819
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||| ||||||| |||||||||||||| || |  |||||||||||| ||||||    
T  30893875 cattcaataaatgatgtatgtggtctttattgtaggcaacatacatcatttattgaa 30893819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 38860841 - 38860897
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   |||||||   ||||||||||||||||||||    
T  38860841 cattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaa 38860897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 38860899 - 38860843
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || |||    ||||||||||||||||||||    
T  38860899 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 38860843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 331 - 443
Target Start/End: Complemental strand, 40262612 - 40262500
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactctttaatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40262612 atacaccctccggtcactaatataagcaaaaatccact-ttaaatacatttaattaatgatgtatgtggtctttattatatgtcacatacatcattaatt 40262514  T
Q  430 gaaaatatctaaaa 443  Q
    ||| ||||||||||    
T  40262513 gaatatatctaaaa 40262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 331 - 443
Target Start/End: Complemental strand, 6065607 - 6065493
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  6065607 atacaccctccggtcactaatataagcaaaaatccactctttagatacattcaattaatgatgtatgtggtccttattatatgtcacatccatcattaat 6065508  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  6065507 tgaatgtatctaaaa 6065493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 330 - 458
Target Start/End: Complemental strand, 37734920 - 37734790
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37734920 aatacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgcggtctttattatatgtcacatacatcattaa 37734821  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    |||||  ||||| |||  | |||||||||||    
T  37734820 ttgaatgtatcttaaaagtgaatttttgctt 37734790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 8258088 - 8257960
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  8258088 tacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacattattaatt 8257989  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  | |||||||||||    
T  8257988 gaatgtatctaaaaagtgaatttttgctt 8257960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 48022589 - 48022718
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  48022589 atacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaa 48022688  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  ||||| |||  | |||||||||||    
T  48022689 tgaatgtatcttaaaagtgaatttttgctt 48022718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 639794 - 639922
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |    
T  639794 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaat 639893  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  ||||| |||  | |||||||||||    
T  639894 gaatgtatcttaaaagtgaatttttgctt 639922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 33604137 - 33604034
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  33604137 atacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaa 33604038  T
Q  429 tgaa 432  Q
    ||||    
T  33604037 tgaa 33604034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 31008253 - 31008367
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| | ||| |||| ||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  31008253 atacaccctccggtcactaatataagcaaaaatctactttttagatacatttaattaatgatgtatgtggtctttattatatgttacatacatcattaat 31008352  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  31008353 tgaatgtatctaaaa 31008367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 332 - 442
Target Start/End: Original strand, 27206754 - 27206866
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  27206754 tacaccctccggccactaatataagcaaaaaaccactttttagatacattcaattaatgatgtatgtagtctttattatatgtcgcatacatcattaatt 27206853  T
Q  430 gaaaatatctaaa 442  Q
    |||  ||||||||    
T  27206854 gaatgtatctaaa 27206866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 5856502 - 5856400
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||| |||| ||||||||||||||||||| ||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  5856502 tacaccatccgatcactaatataagcaaaaatccactttttaaatacattcaattaattatgtatgtggtctttattatatgtcacgtacatcattaatt 5856403  T
Q  430 gaa 432  Q
    |||    
T  5856402 gaa 5856400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 3384368 - 3384240
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| |||||||||||||||||||  |||||  |||| |||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  3384368 tacatcctccggtcactaatataaataaaaattcactttttagatacattcaattgatgatgtatgtgatctttattatatgtcacatacatcattaatt 3384269  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  | |||||||||||    
T  3384268 gaatgtatctaaaaagtgaatttttgctt 3384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 35367520 - 35367601
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||  ||||||||||    
T  35367520 attcaattaatgatgcatgtggtctttataatatgtcacatacatcattaattgaatgtatctaaaaaatggatttttgctt 35367601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 25129962 - 25129864
Alignment:
Q  210 taagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||||||| ||||||||| || ||||||||||| | ||||||||  |||||||||||||||  ||||||||||||||||||||| ||||| |||||    
T  25129962 taagaagactaaagaagaaatgttatcttggaaatggtgcattcaatgcattgaaactttaaaatgtaactttttctacttaaaattcatcaattattt 25129864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 4602789 - 4602676
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| |||||||||||||||||||| |||||  || | |||| ||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||    
T  4602789 tacaacctccggtcactaatataagtaaaaattcattttttagatacattcaattaatgatatatgtggtatttattatatgtcacatatatcattaatt 4602690  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  4602689 gaatgtatctaaaa 4602676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 332 - 455
Target Start/End: Complemental strand, 15440007 - 15439882
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttt-aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||| |||| | |||||||||||||||   ||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  15440007 tacacccttcggttattaatataagcaaaaattgactttttaaatacattcaattaataatgtatgtggtctttattatatgtcacatatatcattaatt 15439908  T
Q  430 gaaaatatctaaaagataaatttttg 455  Q
    |||  |||||| || ||| |||||||    
T  15439907 gaatgtatctacaaaatagatttttg 15439882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 203 - 319
Target Start/End: Original strand, 1609708 - 1609823
Alignment:
Q  203 cacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaa 302  Q
    ||||| ||||||||| || |||| || |||||||||| ||||||| |||||||| ||||||||| ||||||  ||| |||||||||||||||||||||||    
T  1609708 cacttgttaagaagattaaagaacaacttttgtcttgaaaatgatgcattcaatgtattgaaac-ttaaaatgtaattttttctacttaaaatttatcaa 1609806  T
Q  303 ctattttcatttttgta 319  Q
     |||||| || ||||||    
T  1609807 ttatttttatctttgta 1609823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 373 - 443
Target Start/End: Complemental strand, 2349858 - 2349788
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||  |||||||||    
T  2349858 atacattcaattaatgatgtatgtagtctttattatatgtcacatgcatcattaattgaatgtatctaaaa 2349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 372 - 458
Target Start/End: Complemental strand, 34658489 - 34658403
Alignment:
Q  372 aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||  ||||| |||  | |||||||||||    
T  34658489 aatacattcaattaataatgtatgtggtctttattatatgtcacatacatcattaattaaatgtatctgaaaagtgaatttttgctt 34658403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 14418099 - 14418180
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||  | |||||||||||    
T  14418099 attctattaatgatgtatgtggtctttattatatgtcacatacatcattagttgaatgtatctaaaaagtgaatttttgctt 14418180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 4060166 - 4060294
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||| ||| ||||||||||||||||||||| ||||| |||| ||| ||||||||||| ||  |||||||||||||||||| ||| ||||||||||| ||    
T  4060166 tacacactctggtcactaatataagcaaaaatccactttttagatatattcaattaataatatatgtggtctttattatatctcaaatacatcattagtt 4060265  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
     ||  |||||||||  || ||||||||||    
T  4060266 aaatgtatctaaaaagtagatttttgctt 4060294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 443
Target Start/End: Complemental strand, 2353041 - 2352927
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||| |||| |||||||||||||||||||   | | |||| ||||||| ||||||||||| ||||| |||||||||||||||| |||| ||||||||    
T  2353041 atacaccttccgatcactaatataagcaaaaatttattttttagatacatttaattaatgatgtatgtgctctttattatatgtcaaatacgtcattaat 2352942  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  2352941 tgaatgtatctaaaa 2352927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 203 - 319
Target Start/End: Complemental strand, 36995355 - 36995238
Alignment:
Q  203 cacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctactt-aaaatttatca 301  Q
    ||||| |||||||| | | |||||||||||||| ||||||||| | ||||||||  ||||||| |||| ||  ||||||||||||||| |||||||| ||    
T  36995355 cacttgttaagaagtccaaagaagaaattttgttttggaaatggtgcattcaatgcattgaaattttataaagtaactttttctacttaaaaatttacca 36995256  T
Q  302 actattttcatttttgta 319  Q
    | ||||| ||||||||||    
T  36995255 attatttccatttttgta 36995238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 17490479 - 17490559
Alignment:
Q  328 ataatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttatt 406  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||| ||||||| ||||||||||  ||||||||||||||    
T  17490479 ataatagaccctccggtcactaatataagcaaaaatccactttttagatacatttaattaatgatatatgtggtctttatt 17490559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 39216245 - 39216146
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaaccactctttaatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattg 430  Q
    ||||||||||||||||||| |||||||||||||   ||||  || |||||||||||||||| || | ||||||||||||    |||||||||||||||||    
T  39216245 atacaccctccggtcactattataagcaaaaac--atcttatattcattcaattaatgatgtatatagtctttattatagacaacatacatcattaattg 39216148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 45115316 - 45115187
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||| |||||||||||| | ||  |||| || |||||| |||||||||||  ||||||||||||||   |||||| ||||||||     
T  45115316 atacaccctccggtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatatatcattaaa 45115217  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    |||| | | |||||| ||| ||||||||||    
T  45115216 tgaataaacctaaaatatagatttttgctt 45115187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 432
Target Start/End: Original strand, 6283525 - 6283632
Alignment:
Q  327 aataatacaccctccggtcactaatataagc-aaaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcat 424  Q
    |||| |||||||||||||||||||||||||| |||||| ||  ||||  | |||||| |||||||||||  ||||||||||||||   ||||||||||||    
T  6283525 aatactacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcat 6283624  T
Q  425 taattgaa 432  Q
    ||| ||||    
T  6283625 taaatgaa 6283632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 396
Target Start/End: Complemental strand, 31008405 - 31008338
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgt 396  Q
    |||||||||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||| ||||    
T  31008405 atacaccctccggtcattaatataagcaaaaatccactttttagatacattcaattaatgatgtatgt 31008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 23944031 - 23944101
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggt 399  Q
    ||||||||||||||||||||||||||||||||  || | |||| ||||||||||||||||||| |||||||    
T  23944031 atacaccctccggtcactaatataagcaaaaattcattttttagatacattcaattaatgatgtatgtggt 23944101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 27206905 - 27206843
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatg 391  Q
    |||||||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||    
T  27206905 atacaccctccggtcactaatataagcaaaaatcaactatttagatacattcaattaatgatg 27206843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 2748566 - 2748663
Alignment:
Q  222 agaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    |||||||||||||||||  ||||| |  |||||||  ||||||||||| |||  ||| ||||| ||||||||||||||||| |||||  |||||||||    
T  2748566 agaagaaattttgtcttaaaaatggtgaattcaatgcattgaaactttgaaaagtaattttttttacttaaaatttatcaattatttctatttttgta 2748663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 443
Target Start/End: Original strand, 3384218 - 3384331
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||| |||||||||||||||  |||| |||| ||||||||||||||||||| |||||   | || || |  ||||||||||||| ||||    
T  3384218 tacaccctccggtcattaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcatcaatt 3384317  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  3384318 gaatgtatctaaaa 3384331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 34953891 - 34954019
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactcttt--aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||| ||||||| |||||||||||| || | |||  ||| |||||| | ||||||| ||||||||| || || |   || ||||||||||||||    
T  34953891 tacaccctccagtcactattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaatt 34953990  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||   |||||||| ||||||||||||||    
T  34953991 gaatgaatctaaaatataaatttttgctt 34954019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 6065455 - 6065523
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaa-accactcttta-atacattcaattaatgatgcatgtg 397  Q
    |||||||||||||||||||||||||||||||  | ||| |||| ||||||||||||||||||| |||||    
T  6065455 atacaccctccggtcactaatataagcaaaattctactttttagatacattcaattaatgatggatgtg 6065523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 8257938 - 8258066
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||| ||||||||||||||  |||| |||| ||||||||||||||| ||| |||||   | || || |   |||||||||||||||||    
T  8257938 tacaccctccggtcacaaatataagcaaaaattcactttttagatacattcaattaataatgtatgtgacatataataaagaccacatacatcattaatt 8258037  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  | |||||||||||    
T  8258038 gaatgtatctaaaaagtgaatttttgctt 8258066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 8472455 - 8472364
Alignment:
Q  214 aagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||  |||||||| |||||||||||||| | |||||||   ||||||||||||     ||||||||||||||||||||||||||| |||||    
T  8472455 aagactaatgaagaaatgttgtcttggaaatggtgcattcaaagcattgaaactttatg---taactttttctacttaaaatttatcaattattt 8472364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 31909790 - 31909846
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| |||||||   ||||||||||||||||||||    
T  31909790 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaa 31909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 52253637 - 52253581
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||||||||| |||  |||||||  |||||||||||||||||||||    
T  52253637 cattcaattaatgatgcatgtagtccatattataaatcacatacatcattaattgaa 52253581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 35367623 - 35367556
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtg 397  Q
    |||||||||||||||||| |||||||||||| ||| | |||| ||||||||||||||||||| |||||    
T  35367623 tacaccctccggtcactactataagcaaaaatccattttttagatacattcaattaatgatgtatgtg 35367556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 36040292 - 36040189
Alignment:
Q  331 atacaccctccggtcactaatataagca-aaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||| ||||| ||  ||||  | |||||| |||||||||||  | ||||||||||||   |||||||||||||||     
T  36040292 atacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaa 36040193  T
Q  429 tgaa 432  Q
    ||||    
T  36040192 tgaa 36040189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 1036032 - 1035930
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||||||||  |||| | || || |||||||||||||||  |||  || || |||||| || |||||||||||| |||    
T  1036032 tacaccctccggtcactaatataagcaaaaattcactttctagattcattcaattaatgatttatgcagttttaattataggtaacatacatcatttatt 1035933  T
Q  430 gaa 432  Q
    |||    
T  1035932 gaa 1035930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 15259536 - 15259494
Alignment:
Q  45 aaaacagaaaagaaactcttatcctatgcccaatatggtaaac 87  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  15259536 aaaacagaaaagaaactcttagcctatgcccagtatggtaaac 15259494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 273
Target Start/End: Original strand, 15646912 - 15646982
Alignment:
Q  203 cacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaa 273  Q
    ||||| |||| |||| || |||||||||||||||||||||||| | |||| |||  |||||||||||||||    
T  15646912 cacttgttaaaaagattaaagaagaaattttgtcttggaaatggtgcattgaatgcattgaaactttaaaa 15646982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 26724339 - 26724396
Alignment:
Q  259 attgaaactttaaaagataactttttctacttaaaatttatcaactattttcattttt 316  Q
    ||||||| |||||||| ||| ||||| | ||||||||||||||| |||||||||||||    
T  26724339 attgaaattttaaaaggtaagtttttgtgcttaaaatttatcaattattttcattttt 26724396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 26732456 - 26732513
Alignment:
Q  259 attgaaactttaaaagataactttttctacttaaaatttatcaactattttcattttt 316  Q
    ||||||| |||||||| ||| ||||| | ||||||||||||||| |||||||||||||    
T  26732456 attgaaattttaaaaggtaagtttttgtgcttaaaatttatcaattattttcattttt 26732513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 36271192 - 36271297
Alignment:
Q  204 acttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaac 303  Q
    |||| |||||||| ||| |||| ||| ||||| |||  |||||||||||||||  |||||||||||  || |||| ||||||||| | ||| |||||||     
T  36271192 acttgttaagaagtctaaagaataaactttgttttgtgaatgatacattcaatgcattgaaactttggaaaataattttttctacatgaaacttatcaat 36271291  T
Q  304 tatttt 309  Q
    ||||||    
T  36271292 tatttt 36271297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 14418203 - 14418135
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtg 397  Q
    |||||||||||||||| |||||||||||||||  |||| |||| |||||||||| |||||||| |||||    
T  14418203 atacaccctccggtcattaatataagcaaaaattcactttttagatacattcaactaatgatgtatgtg 14418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 28725613 - 28725581
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||||    
T  28725613 aatacaccctccggtcactaatataagcaaaaa 28725581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 38824390 - 38824334
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| ||||||    ||||||||||||||||||||    
T  38824390 cattcaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaa 38824334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 47011285 - 47011341
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||  ||||||||  |||||||  |||||||||||||||||||||    
T  47011285 cattcaattaatgatatatgtggtccatattataaatcacatacatcattaattgaa 47011341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 2349751 - 2349818
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtg 397  Q
    ||||| ||| |||||||||||||| |||||| ||| | |||| |||||||||||||||||||||||||    
T  2349751 tacactctctggtcactaatataaacaaaaatccattttttagatacattcaattaatgatgcatgtg 2349818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 443
Target Start/End: Complemental strand, 4683036 - 4682969
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    |||||||||||||||| ||||||||| || |||    |||||||||||||||||||| | ||||||||    
T  4683036 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaataaatctaaaa 4682969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 29302058 - 29302089
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  29302058 atacaccctccggtcactaatataagcaaaaa 29302089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 29302211 - 29302180
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  29302211 atacaccctccggtcactaatataagcaaaaa 29302180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 31634434 - 31634489
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||| ||||||||  |||||||  ||||||||| |||||||||||    
T  31634434 attcaattaatgatgtatgtggtccatattataaatcacatacaacattaattgaa 31634489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 33939443 - 33939340
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||| |||||||||||    ||  |||| || |||||| |||||||||||  ||||||||||||||   |||||||||||||||     
T  33939443 atacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaa 33939344  T
Q  429 tgaa 432  Q
    ||||    
T  33939343 tgaa 33939340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 36040140 - 36040171
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  36040140 atacaccctccggtcactaatataagcaaaaa 36040171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 41161611 - 41161580
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  41161611 atacaccctccggtcactaatataagcaaaaa 41161580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 48022741 - 48022710
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  48022741 atacaccctccggtcactaatataagcaaaaa 48022710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 639944 - 639914
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  639944 tacaccctccggtcactaatataagcaaaaa 639914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 4060316 - 4060286
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  4060316 tacaccctccggtcactaatataagcaaaaa 4060286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 432
Target Start/End: Complemental strand, 5852789 - 5852731
Alignment:
Q  374 tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||| |||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  5852789 tacattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 5852731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 15351814 - 15351732
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||| ||||||| |||||||||||||| ||    |||||||||||| ||||||   || ||||| ||||||||||||||    
T  15351814 cattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatttaaaatataaatttttgctt 15351732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 18407466 - 18407557
Alignment:
Q  224 aagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttg 317  Q
    |||||| ||||| |||  ||||||||||||||| ||||||||||||||||  ||  ||||||||| ||||  ||||||| |||||  |||||||    
T  18407466 aagaaactttgttttgagaatgatacattcaatgtattgaaactttaaaaagtatttttttctacataaa--ttatcaattatttagatttttg 18407557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 23575312 - 23575342
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  23575312 tacaccctccggtcactaatataagcaaaaa 23575342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 28725461 - 28725491
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  28725461 tacaccctccggtcactaatataagcaaaaa 28725491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 33939292 - 33939322
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  33939292 tacaccctccggtcactaatataagcaaaaa 33939322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 46517984 - 46518042
Alignment:
Q  374 tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||| |||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  46517984 tacattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 46518042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Original strand, 2352973 - 2353018
Alignment:
Q  413 cacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  2352973 cacatacatcattaattaaatgtatctaaaaaataaatttttgctt 2353018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 15647258 - 15647299
Alignment:
Q  276 taactttttctacttaaaatttatcaactattttcatttttg 317  Q
    |||||||||||||||||||||||| || ||||| ||||||||    
T  15647258 taactttttctacttaaaatttataaattatttccatttttg 15647299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 23944099 - 23944054
Alignment:
Q  413 cacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||||||||||||||  ||||||||| || |||||||||||    
T  23944099 cacatacatcattaattgaatgtatctaaaaaatgaatttttgctt 23944054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 24478706 - 24478759
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||  ||||||||| |||||||   |||||||||||||||||    
T  24478706 cattcaattaatgatatatgtggtctatattataaaccacatacatcattaatt 24478759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 34953995 - 34953946
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||| || ||||||||||||||   |||||||||||||    
T  34953995 cattcaattaatgatgtatatggtctttattatagaccacatacatcatt 34953946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 43384524 - 43384597
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaa 449  Q
    |||||||||||||||| ||||||||| || ||||   ||||||||| ||| ||||||   ||||||||||||||    
T  43384524 cattcaattaatgatgtatgtggtctataatataaaccacatacataattgattgaatgaatctaaaagataaa 43384597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 8465974 - 8466018
Alignment:
Q  383 ttaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||| |||||||||||||||||   |||||||||||||||    
T  8465974 ttaatgatgtatgtggtctttattatagaccacatacatcattaa 8466018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 8751473 - 8751529
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||| | | |||||   ||||||||||||||||||||    
T  8751473 cattcaattaatgatgtatgtggtttatgttataaaccacatacatcattaattgaa 8751529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 14214543 - 14214575
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||| ||||||||||||    
T  14214543 aatacaccctccggtcactattataagcaaaaa 14214575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 363
Target Start/End: Complemental strand, 14214675 - 14214643
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac 363  Q
    ||||||||||||||||||| |||||||||||||    
T  14214675 atacaccctccggtcactattataagcaaaaac 14214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 15278606 - 15278662
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||| ||||||||| ||||| ||| |||||||   ||||||||||||||||||||    
T  15278606 cattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaa 15278662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 15278664 - 15278608
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||| | || ||||  |||||||||||||||| ||||    
T  15278664 cattcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaa 15278608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 21321412 - 21321376
Alignment:
Q  381 aattaatgatgcatgtggtctttattatatgtcacat 417  Q
    ||||||||||| || ||||||||||||||||||||||    
T  21321412 aattaatgatgtatatggtctttattatatgtcacat 21321376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 23575417 - 23575361
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||| |||||||||||| || |||||||||||   ||||||||||||||| ||||    
T  23575417 cattcatttaatgatgcatatgatctttattatagaccacatacatcattaaatgaa 23575361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 25378356 - 25378300
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  25378356 cattcaattaatgatgtatgtggtcaatattatgaaccacatacatcattaattgaa 25378300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 27549086 - 27549142
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  27549086 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 27549142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 31909848 - 31909792
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||| | || ||||   ||||||||||||||||||||    
T  31909848 cattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaa 31909792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 432
Target Start/End: Original strand, 33738208 - 33738260
Alignment:
Q  380 caattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  33738208 caattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 33738260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 35049973 - 35050029
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||| ||| |||||||  ||| ||| |||||||||||||    
T  35049973 cattcaattaatgatgtatgtgatctatattataaatcatatatatcattaattgaa 35050029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 37255167 - 37255223
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  37255167 cattcaattaatgatgtatgtggtccatattattaaccacatacatcattaattgaa 37255223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 38847343 - 38847399
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||| ||||||||| ||||||||| |||||||   ||||||||||||||| ||||    
T  38847343 cattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaa 38847399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 39015604 - 39015660
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  39015604 cattcaattaatgatgtatgtggtcaatattatgaaccacatacatcattaattgaa 39015660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 40262462 - 40262530
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtg 397  Q
    |||||| |||||||||||||||||| |||||| ||| | |||| ||| ||||||||||||||| |||||    
T  40262462 atacactctccggtcactaatataaacaaaaatccagtttttagatatattcaattaatgatgtatgtg 40262530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 44698067 - 44698119
Alignment:
Q  250 attcaatatattgaaactttaaaagataactttttctacttaaaatttatcaa 302  Q
    |||||| |||||||||| ||||||  |||||||||| || |||||||||||||    
T  44698067 attcaacatattgaaacattaaaaagtaactttttcaacataaaatttatcaa 44698119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 45925257 - 45925341
Alignment:
Q  349 aatataagcaaaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||  |||| |||| || |||||| ||||||||| ||||||||| ||||||    ||||||||||||||| ||||    
T  45925257 aatataagcaaaattcactttttagattcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaa 45925341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 48605111 - 48605167
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  || |||   |||||||||||||||||||||    
T  48605111 cattcaattaatgatgtatgtggtccataatatgaatcacatacatcattaattgaa 48605167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 43426623 - 43426751
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  43426623 tacacccttcggtcactaatataagtaaaaatccactttttaaatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaatt 43426722  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  ||||||||| ||||||||||||||    
T  43426723 gaatgtatctaaaaaataaatttttgctt 43426751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 38594338 - 38594467
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||  |||||||| |||||||||||||||||||||||||||    
T  38594338 atacaccctccggtcactaatataagcaaaaatctactctttagatacattcaactaatgatatatgtggtccttattatatgtcacatacatcattaat 38594437  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  ||||||||| ||| ||||||||||    
T  38594438 tgaatgtatctaaaaaatagatttttgctt 38594467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 38597934 - 38598063
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||  |||||||| |||||||||||||||||||||||||||    
T  38597934 atacaccctccggtcactaatataagcaaaaatctactctttagatacattcaactaatgatatatgtggtccttattatatgtcacatacatcattaat 38598033  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  ||||||||| ||| ||||||||||    
T  38598034 tgaatgtatctaaaaaatagatttttgctt 38598063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 5574256 - 5574153
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  5574256 atacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaat 5574157  T
Q  429 tgaa 432  Q
    ||||    
T  5574156 tgaa 5574153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 32838747 - 32838637
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||| | || |||||||||||||||||||||||||| ||||||||  |||||||||||||||  |||| ||||||| |||||||||||||| |||||    
T  32838747 ttaagaaaattaaagaagaaattttgtcttggaaatgatgcattcaatgcattgaaactttaaaatgtaacattttctatttaaaatttatcaattattt 32838648  T
Q  309 tcatttttgta 319  Q
    |||||||||||    
T  32838647 tcatttttgta 32838637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 1980979 - 1981092
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaa-accac-tctttaatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||  |||| | || |||||||||||||||||||  |||||| |||||||||||||||||||||||||||||    
T  1980979 atacaccctccggtcactaatataagcaaaattccacattttaaatacattcaattaatgatttatgtgg-ctttattatatgtcacatacatcattaat 1981077  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  1981078 tgaatgtatctaaaa 1981092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 202 - 315
Target Start/End: Complemental strand, 19002871 - 19002758
Alignment:
Q  202 acacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatca 301  Q
    |||||| |||| ||||||| |||||||| ||||||||||||||| | ||||||||  ||||||| |||||||  ||| ||||||||||||||||||||||    
T  19002871 acacttgttaaaaagactaaagaagaaactttgtcttggaaatggtgcattcaatgcattgaaattttaaaaagtaaatttttctacttaaaatttatca 19002772  T
Q  302 actattttcatttt 315  Q
    | ||||||||||||    
T  19002771 attattttcatttt 19002758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 343 - 458
Target Start/End: Complemental strand, 30902407 - 30902290
Alignment:
Q  343 gtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatcta 440  Q
    ||||||||||||||||||||   ||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||| ||    
T  30902407 gtcactaatataagcaaaaatttactttttagatacattcaattaatgatatatgtggtctttattatatgtcacatacatcattaattgaatgtattta 30902308  T
Q  441 aaagataaatttttgctt 458  Q
    ||| || |||||||||||    
T  30902307 aaaaatgaatttttgctt 30902290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 330 - 458
Target Start/End: Complemental strand, 22373758 - 22373627
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaacc--actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatta 426  Q
    |||||||| |||| ||||||||||||||||||| |  | | |||| ||||||||| ||||||||| |||||||||||||||||||| | |||||||||||    
T  22373758 aatacaccttccgctcactaatataagcaaaaatctaattttttagatacattcagttaatgatgtatgtggtctttattatatgttatatacatcatta 22373659  T
Q  427 attgaaaatatctaaaagataaatttttgctt 458  Q
    |||||| |||| ||||| ||| ||||||||||    
T  22373658 attgaatatatttaaaaaatatatttttgctt 22373627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 329 - 443
Target Start/End: Original strand, 34248407 - 34248523
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatta 426  Q
    |||||||| |||  ||||||||||||||||||||  |||| |||| ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  34248407 taatacactctctagtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgttgtctttattatatgtcagatacatcatta 34248506  T
Q  427 attgaaaatatctaaaa 443  Q
    ||||||  |||||||||    
T  34248507 attgaatgtatctaaaa 34248523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 3887826 - 3887941
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||| | ||||||||||||||||||| | | | |||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  3887826 aatacaccctctgatcactaatataagcaaaaatctattttttagatacattcaattaatgatttatgtagtctttattatatgtcacatacatcattaa 3887925  T
Q  428 ttgaaaatatctaaaa 443  Q
    |||||  |||||||||    
T  3887926 ttgaatgtatctaaaa 3887941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 25278320 - 25278191
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||| |||||| || ||||||||||||  ||||||||| |||||||||||||||| ||  | ||||||||||||| | |||||||||||||||||    
T  25278320 atacacccttcggtcattagtataagcaaaaattcactctttatatacattcaattaatgttgtttatggtctttattatgtatcacatacatcattaat 25278221  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    | ||  |||||||||| |||||||||||||    
T  25278220 taaatgtatctaaaaggtaaatttttgctt 25278191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 358 - 457
Target Start/End: Original strand, 3714235 - 3714335
Alignment:
Q  358 aaaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgc 456  Q
    |||||||||| |||| ||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||||||| | ||| ||||||  | |||||||||    
T  3714235 aaaaaccactttttagatacattcaattaattatgtatgtagtctttattatatatcacatacatcattaattggatatacctaaaaagtgaatttttgc 3714334  T
Q  457 t 457  Q
    |    
T  3714335 t 3714335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 41252862 - 41252763
Alignment:
Q  210 taagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataa-ctttttctacttaaaatttatcaactattt 308  Q
    ||||||||||| |||||| || |||||||||||||||| ||||||||  |||||||||||||||  |||  ||||||||||||||||| ||||| |||||    
T  41252862 taagaagactaaagaagatatgttgtcttggaaatgatgcattcaatgcattgaaactttaaaatgtaatttttttctacttaaaattcatcaattattt 41252763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 442
Target Start/End: Original strand, 6566910 - 6567022
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||| ||||||||||||| ||||||||  |||| |||| ||| ||| ||||||| ||| || | || ||||||||||||| |||||||||||||||    
T  6566910 tacacccttcggtcactaatatgagcaaaaaatcactttttagatatatttaattaataatgtatatagtttttattatatgtcgcatacatcattaatt 6567009  T
Q  430 gaaaatatctaaa 442  Q
    ||| |||||||||    
T  6567010 gaatatatctaaa 6567022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 443
Target Start/End: Original strand, 20504243 - 20504351
Alignment:
Q  337 cctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaa 434  Q
    ||||||||||||||||||| |||||| | ||| |||| ||| ||||||||||||||| || |  |||||||||||||| | |||||||||||||||||      
T  20504243 cctccggtcactaatataaacaaaaatctactttttagatatattcaattaatgatgtatataatctttattatatgttatatacatcattaattgaatg 20504342  T
Q  435 tatctaaaa 443  Q
    |||||||||    
T  20504343 tatctaaaa 20504351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 454
Target Start/End: Original strand, 38618146 - 38618217
Alignment:
Q  383 ttaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaattttt 454  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||| | ||| ||||||    
T  38618146 ttaatgatgtatgtggtctttattatatatcacatacatcattaattgaatgtatctaacaaatagattttt 38618217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 3887978 - 3887850
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacca-ctcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||||||| || || |||| ||||||||||||||||||| |||||   | || || |    ||||| ||||||||||    
T  3887978 tacaccctccggtcactaatataagcaaaaatcatctttttagatacattcaattaatgatgtatgtgacatataataaagactacataaatcattaatt 3887879  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  ||||||||| ||| ||||||||||    
T  3887878 gaatgtatctaaaaaatagatttttgctt 3887850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 19950112 - 19950209
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactctttaa--tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||| |  | ||| |  | |||| | |||||||||||  |||||||||||||||  |||||||||||||||    
T  19950112 tacaccctccggtcactaatataagcaaaaaactatattttaggttcatttatttaatgatgcacatggtctttattatataccacatacatcattaa 19950209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 33847488 - 33847546
Alignment:
Q  210 taagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactt 268  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  33847488 taagaagactaaagaagaaatgttgtcttggaaatgatgcattcaatgcattgaaactt 33847546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 34248561 - 34248499
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatg 391  Q
    |||||||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  34248561 atacaccctctggtcactaatataagcaaaaatccactttttagatacattcaattaatgatg 34248499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 752267 - 752182
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaa 294  Q
    |||||||| ||| ||||||||||||||||||| | |||| ||||||| | |||||||||| ||||  ||| ||||||||| |||||    
T  752267 ttaagaagtctaaagaagaaattttgtcttgggattgatgcattcaacacattgaaacttgaaaaagtaattttttctacataaaa 752182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 38598087 - 38598018
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtg 397  Q
    ||||||||||||||||||||||||||||||||| | | | |||| ||||||||||||||||||| |||||    
T  38598087 aatacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 38598018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 1388572 - 1388480
Alignment:
Q  227 aaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    |||| |||||||| ||||||||||||||||  ||| |||| ||||||  |||| |||| || |||||||||||| | |||||| |||||||||    
T  1388572 aaatgttgtcttgaaaatgatacattcaatgcattaaaacattaaaaagtaaccttttttatttaaaatttatctattatttttatttttgta 1388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 4898264 - 4898208
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||  |||||||||||||||||||||    
T  4898264 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaa 4898208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 4945658 - 4945602
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||  |||||||||||||||||||||    
T  4945658 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaa 4945602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 458
Target Start/End: Complemental strand, 38181909 - 38181777
Alignment:
Q  328 ataatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    ||||||||||||||||| |||| |||||||||||| | ||  |||| || |||||||||||||||| || | ||||||||| ||  ||||||||||||||    
T  38181909 ataatacaccctccggttactattataagcaaaaaactacattttacattcattcaattaatgatgtatatagtctttattgtagatcacatacatcatt 38181810  T
Q  426 aattgaaaatatctaaaagataaatttttgctt 458  Q
     | ||||   |||||||| ||  ||||||||||    
T  38181809 taatgaatgaatctaaaatattgatttttgctt 38181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 38594490 - 38594422
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtg 397  Q
    |||||||||||||||||||||||||||||||| | | | |||| ||||||||||||||||||| |||||    
T  38594490 atacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 38594422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 443
Target Start/End: Complemental strand, 7837180 - 7837117
Alignment:
Q  380 caattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    ||||||| |||| | |||||||||||||||||||||||  |||||||||||||  |||||||||    
T  7837180 caattaaagatgtacgtggtctttattatatgtcacatttatcattaattgaatgtatctaaaa 7837117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 24457246 - 24457143
Alignment:
Q  331 atacaccctccggtcactaatataagca-aaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||| ||||| ||  ||||  | |||||| |||||||||||  | ||||||||||||   |||||||||||||||     
T  24457246 atacaccctccggtcactaatataagcaaaaaactacattttatgttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaa 24457147  T
Q  429 tgaa 432  Q
    ||||    
T  24457146 tgaa 24457143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 38721681 - 38721626
Alignment:
Q  258 tattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatt 313  Q
    ||||||||||||||||  ||||||||| || |||||||||||||| ||||||||||    
T  38721681 tattgaaactttaaaaattaactttttttatttaaaatttatcaattattttcatt 38721626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 458
Target Start/End: Original strand, 5574108 - 5574233
Alignment:
Q  335 accctccggtcactaatataagcaaaaa-ccactctt-taatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||||||||||||||||  |||| ||  |||||||||||||||||||  |||||   | || || |   ||||||||||||||||||||    
T  5574108 accctccggtcactaatataagcaaaaattcacttttaaaatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaattgaa 5574207  T
Q  433 aatatctaaaagataaatttttgctt 458  Q
      |||||||||  || ||||||||||    
T  5574208 tgtatctaaaaagtagatttttgctt 5574233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 429
Target Start/End: Complemental strand, 10041641 - 10041588
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||| ||||||||| |||||||   |||||||||||||||||    
T  10041641 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaatt 10041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 329 - 432
Target Start/End: Complemental strand, 26234172 - 26234067
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatta 426  Q
    ||||||||||||||||||||| |||||||||||    ||  |||| || |||||| |||||||||||  ||||||||||||||   ||||||||||||||    
T  26234172 taatacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcatta 26234073  T
Q  427 attgaa 432  Q
    | ||||    
T  26234072 aatgaa 26234067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 425
Target Start/End: Original strand, 37195046 - 37195142
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaaccactcttt--aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||||||||||||||||||   | | |||   || || ||||||||||||| || ||||||||||||||   |||||||||||||    
T  37195046 atacaccctccggtcactaatataagcaaaagttaatattttagattcactcaattaatgatgtatatggtctttattatagaccacatacatcatt 37195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 316
Target Start/End: Original strand, 4640196 - 4640288
Alignment:
Q  224 aagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcattttt 316  Q
    |||||||| |||||||  |||||| ||||||| |  |||||| |||||||  | ||||||||||| ||||| |||| || |||||||||||||    
T  4640196 aagaaattatgtcttgagaatgatgcattcaacacgttgaaaatttaaaaagttactttttctacgtaaaacttataaattattttcattttt 4640288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 6567055 - 6566999
Alignment:
Q  337 cctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatg 391  Q
    |||||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||    
T  6567055 cctccggtcactaatataagcaaaaatccactatttagatatattcaattaatgatg 6566999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 19612935 - 19613038
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaaccactcttt--aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| |  | |||   || |||||| |||||||||||  | || |||||||||   |||||||||||||||     
T  19612935 atacaccctccggtcactaatataagcaaaaatctatattttagattcattcatttaatgatgcacatagtttttattatagaccacatacatcattaaa 19613034  T
Q  429 tgaa 432  Q
    ||||    
T  19613035 tgaa 19613038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 20195388 - 20195332
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||   |||||||||||||||||||||    
T  20195388 cattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaattgaa 20195332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 24457093 - 24457125
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||||    
T  24457093 aatacaccctccggtcactaatataagcaaaaa 24457125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 26234017 - 26234049
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||||    
T  26234017 aatacaccctccggtcactaatataagcaaaaa 26234049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 2060198 - 2060229
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  2060198 atacaccctccggtcactaatataagcaaaaa 2060229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 2060648 - 2060617
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  2060648 atacaccctccggtcactaatataagcaaaaa 2060617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 8740513 - 8740616
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||| ||| ||||||| |||||||||||| | ||  |||| || |||||| |||||||||||  ||||||||||||||   |||||||||||||||     
T  8740513 atacaccatccagtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaa 8740612  T
Q  429 tgaa 432  Q
    ||||    
T  8740613 tgaa 8740616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 11726491 - 11726618
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattg 430  Q
    |||||||||||||||||| ||||||||||||  ||  |||| || |||||||| ||||||| || |  ||||||||||   |||||||||||||| | ||    
T  11726491 tacaccctccggtcactattataagcaaaaataacattttagattcattcaatcaatgatgtatataatctttattatggatcacatacatcatttaatg 11726590  T
Q  431 aaaatatctaaaagataaatttttgctt 458  Q
    ||   ||||||||  | |||||||||||    
T  11726591 aatgaatctaaaatgttaatttttgctt 11726618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 21488068 - 21488150
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||| |||||||||||  ||||||||||||||   ||||||||||||||| ||||   ||||||||  ||| |||||||||    
T  21488068 cattcatttaatgatgcacatggtctttattataaaccacatacatcattaaatgaatgaatctaaaatgtaattttttgctt 21488150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 425
Target Start/End: Original strand, 4563925 - 4563954
Alignment:
Q  396 tggtctttattatatgtcacatacatcatt 425  Q
    ||||||||||||||||||||||||||||||    
T  4563925 tggtctttattatatgtcacatacatcatt 4563954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Complemental strand, 10099651 - 10099598
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||  ||||||||| |||||||   |||||||||||||||||    
T  10099651 cattcaattaatgatatatgtggtctatattataaaccacatacatcattaatt 10099598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 11153246 - 11153295
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||| |||||| ||||||||||   |||||||||||||    
T  11153246 cattcaattaatgatgtatgtgggctttattatagaccacatacatcatt 11153295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 26003534 - 26003485
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||| || |||||||||||||||   ||||||||||||    
T  26003534 cattcaattaatgatgtatatggtctttattatatactacatacatcatt 26003485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 34911197 - 34911124
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaa 449  Q
    |||||||||||||||| ||||||||  ||||||    |||||||||||||||||||| | | |||||| |||||    
T  34911197 cattcaattaatgatgtatgtggtcgatattatgaaccacatacatcattaattgaataaacctaaaaaataaa 34911124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 5144367 - 5144311
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||| ||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  5144367 catttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 5144311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 9709757 - 9709701
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||| |||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  9709757 cattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 9709701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 11477086 - 11477054
Alignment:
Q  241 aaatgatacattcaatatattgaaactttaaaa 273  Q
    ||||||||||||||||| |||||||||||||||    
T  11477086 aaatgatacattcaatacattgaaactttaaaa 11477054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 12440729 - 12440673
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||| ||||| | ||||||| |||||||  |||||||||||| ||||||||    
T  12440729 cattcaattagtgatgtacgtggtctatattataaatcacatacatcaataattgaa 12440673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 17844050 - 17843994
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   || |||||||||||||||||    
T  17844050 cattcaattaatgatgtatgtggtccatattataaaccatatacatcattaattgaa 17843994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 26229435 - 26229471
Alignment:
Q  326 taataatacaccctccggtcactaatataagcaaaaa 362  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  26229435 taatcatacaccctccggtcactattataagcaaaaa 26229471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 29712585 - 29712530
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  29712585 cattcaattaatgatgtatgtggtc-ctattataaaccacatacatcattaattgaa 29712530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 37396303 - 37396247
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||| ||||||| ||||||||| || ||||  ||| |||||||||||||||||    
T  37396303 cattcaatcaatgatgtatgtggtctataatataaatcatatacatcattaattgaa 37396247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 38465782 - 38465814
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||| ||||||||||||    
T  38465782 aatacaccctccggtcactattataagcaaaaa 38465814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 319
Target Start/End: Original strand, 40349639 - 40349691
Alignment:
Q  267 tttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    |||||||  ||||||||| ||||||||||||| | | ||||||||||||||||    
T  40349639 tttaaaaattaactttttttacttaaaatttaccgattattttcatttttgta 40349691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 43514855 - 43514799
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| || |||||| ||||||    ||||||||||||||||||||    
T  43514855 cattcaattaatgatgtatatggtctatattatgaaccacatacatcattaattgaa 43514799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 38238777 - 38238907
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac--cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||||   |||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38238777 atacaccctccggtcactaatataagcaaaaatttcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaa 38238876  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    |||||  |||||||||  || ||||||||||    
T  38238877 ttgaatgtatctaaaaagtagatttttgctt 38238907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 34703589 - 34703460
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  34703589 atacaccctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcattaat 34703490  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  ||||||||   | |||||||||||    
T  34703489 tgaatgtatctaaattgtgaatttttgctt 34703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 332 - 443
Target Start/End: Original strand, 25079202 - 25079315
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| |||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  25079202 tacatcctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatccttattatatgtcacatacatcattaatt 25079301  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  25079302 gaatgtatctaaaa 25079315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 338 - 458
Target Start/End: Complemental strand, 40417045 - 40416923
Alignment:
Q  338 ctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaat 435  Q
    |||||||||||||||||||||||||  |||| |||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||  |    
T  40417045 ctccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcattaattgaatgt 40416946  T
Q  436 atctaaaagataaatttttgctt 458  Q
    |||||||   | |||||||||||    
T  40416945 atctaaattgtgaatttttgctt 40416923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 343 - 454
Target Start/End: Complemental strand, 1706967 - 1706854
Alignment:
Q  343 gtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatcta 440  Q
    ||||||||||||||||||||  || | |||| ||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||  ||||||    
T  1706967 gtcactaatataagcaaaaattcattttttagatacattcatttaatgatgtatatggtctttattatatgtcacatacatcattaattgaatgtatcta 1706868  T
Q  441 aaagataaattttt 454  Q
    ||| ||||||||||    
T  1706867 aaaaataaattttt 1706854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 45000746 - 45000618
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||| ||||||||||||||||||||||   ||| |||| | |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  45000746 tacacccttcggtcactaatataagcaaaaatgtactttttagacacattcaattgatgatgtatgtggtctttattatatgtcacacacatcattaatt 45000647  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||| || ||| ||||||||||    
T  45000646 gaatgtatctagaaaatagatttttgctt 45000618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 443
Target Start/End: Original strand, 22106672 - 22106775
Alignment:
Q  342 ggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatct 439  Q
    ||||||||||||||||||||| | | | |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||    
T  22106672 ggtcactaatataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatct 22106771  T
Q  440 aaaa 443  Q
    ||||    
T  22106772 aaaa 22106775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 342 - 443
Target Start/End: Complemental strand, 40529679 - 40529576
Alignment:
Q  342 ggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatct 439  Q
    ||||||||||||||||||||| | | | |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||    
T  40529679 ggtcactaatataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatct 40529580  T
Q  440 aaaa 443  Q
    ||||    
T  40529579 aaaa 40529576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 330 - 458
Target Start/End: Original strand, 29498776 - 29498906
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||| |||||||| ||| ||||||||||||||| ||||  |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  29498776 aataaaccctccgatcaataatataagcaaaaatccacattttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacataattaa 29498875  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    || ||  ||||||||| ||  ||||||||||    
T  29498876 ttaaatgtatctaaaaaatggatttttgctt 29498906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 4406422 - 4406509
Alignment:
Q  342 ggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||| |||||||  |||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  4406422 ggtcactaatatatgcaaaaattcactttttagatacattcaattaatgatgtatgttgtctttattatatgtcacatacatcattaa 4406509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 209 - 307
Target Start/End: Complemental strand, 23829002 - 23828904
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactatt 307  Q
    |||||||||||| ||||||| |||||||||  ||||||| |||||||| |||||||| |||| ||  |||| |||||||||||| ||||||||||||||    
T  23829002 ttaagaagactaaagaagaagttttgtcttaaaaatgatgcattcaatgtattgaaattttagaaagtaacattttctacttaacatttatcaactatt 23828904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 38913004 - 38912906
Alignment:
Q  210 taagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||| || |||| |||| |||||||||||||| | ||||||||  ||||||||||||||| | ||||||||||| |||||||||||||| |||||    
T  38913004 taagaagattaaagaataaatgttgtcttggaaatggtgcattcaatgcattgaaactttaaaatacaactttttctatttaaaatttatcaattattt 38912906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 458
Target Start/End: Original strand, 27554535 - 27554620
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||  ||| | |||  |||||||||||||    
T  27554535 atacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaatgtattttaaaagtaaatttttgctt 27554620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 5909067 - 5909182
Alignment:
Q  202 acacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatca 301  Q
    |||||| |||||||| ||| |||||||| |||||||||||| |||| ||||||||   |||||||||| ||| ||||||||||  || ||||| ||||||    
T  5909067 acacttgttaagaagtctaaagaagaaactttgtcttggaagtgatgcattcaatgccttgaaactttgaaaaataacttttttaacataaaaattatca 5909166  T
Q  302 actattttcatttttg 317  Q
    | |||||| |||||||    
T  5909167 attatttttatttttg 5909182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 443
Target Start/End: Complemental strand, 22281546 - 22281475
Alignment:
Q  372 aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    |||||||| ||||||||||| ||||  |||||||||||||||| ||||||||||||||||| ||||||||||    
T  22281546 aatacattgaattaatgatgaatgtactctttattatatgtcatatacatcattaattgaatatatctaaaa 22281475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 25874459 - 25874360
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||| || | |||||||||||||  ||| |||| || |||||||||||||||||||||||||  |||| | |||||||||||||||||||| |||||    
T  25874459 ttaagaaaaccaaagaagaaattttgatttgaaaataatgcattcaatatattgaaactttaaaatgtaacatgttctacttaaaatttatcaattattt 25874360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 443
Target Start/End: Complemental strand, 716336 - 716266
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    ||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||  |||||||||    
T  716336 atacattcaattaatgatgtatgtgatctttattctatgtcatatacatcattaattgaatgtatctaaaa 716266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 24936678 - 24936576
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| |||||||| ||||||||||  |||||  |||| |||| ||| ||||||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  24936678 tacatcctccggttactaatataaataaaaattcactttttagatatattcaattaatgatgtatgtggtctttattatatgtcacagacataattaatt 24936579  T
Q  430 gaa 432  Q
    |||    
T  24936578 gaa 24936576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 21275738 - 21275621
Alignment:
Q  199 agaacacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaattta 298  Q
    ||||||||| ||||||||  || |||||||| |||||||| |||| | | ||||||||  ||| ||| |||||||   ||||||||||||||||||| ||    
T  21275738 agaacacttcttaagaagcttaaagaagaaagtttgtcttagaaaaggtgcattcaatgcattaaaattttaaaaagcaactttttctacttaaaatata 21275639  T
Q  299 tcaactattttcattttt 316  Q
    |||| |||||||||||||    
T  21275638 tcaattattttcattttt 21275621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 454
Target Start/End: Complemental strand, 27554643 - 27554518
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||| |||||||||||||||||||   ||| || || |||||||||||||||||| ||||| | | || || |  |||||||||||||||||    
T  27554643 atacaccctccgatcactaatataagcaaaaatttacttttaaaatacattcaattaatgatgtatgtgatatataataaagatcacatacatcattaat 27554544  T
Q  429 tgaaaatatctaaaagataaattttt 454  Q
    ||||  ||||||||| ||||||||||    
T  27554543 tgaatgtatctaaaaaataaattttt 27554518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 34963467 - 34963375
Alignment:
Q  227 aaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    ||||||| ||||||||||| | ||||||||  ||  ||||||| |||  | ||||||||||||||||||||||||| ||||||||||||||||    
T  34963467 aaattttatcttggaaatggtgcattcaatgcatgaaaactttgaaaagtgactttttctacttaaaatttatcaattattttcatttttgta 34963375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 319
Target Start/End: Complemental strand, 7728692 - 7728582
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||||| || | || || |||||||||||||||| | |||| |||  ||||||| |||||||  ||||||||| || |||||||||||||| |||||    
T  7728692 ttaagaagattaaaaaataatttttgtcttggaaatggtgcatttaattcattgaaattttaaaatgtaactttttataattaaaatttatcaattattt 7728593  T
Q  309 tcatttttgta 319  Q
    | |||||||||    
T  7728592 ttatttttgta 7728582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 443
Target Start/End: Complemental strand, 38238930 - 38238816
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||| |||||   | || || |   ||||||||||||||||    
T  38238930 atacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaat 38238831  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  38238830 tgaatgtatctaaaa 38238816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 316
Target Start/End: Original strand, 40037716 - 40037827
Alignment:
Q  204 acttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaac 303  Q
    ||||||||  ||||||| | |||||||||| ||||  |||||||| |||||||  ||||||||||||||| |  || ||||||| ||||||||||||||     
T  40037716 acttattagtaagactaaaaaagaaattttatcttaaaaatgatatattcaatgcattgaaactttaaaataatac-ttttctatttaaaatttatcaat 40037814  T
Q  304 tattttcattttt 316  Q
    |||||| ||||||    
T  40037815 tatttttattttt 40037827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 458
Target Start/End: Original strand, 21387576 - 21387699
Alignment:
Q  337 cctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaa 434  Q
    |||| ||||||||||||||||||||| ||| | | || || |||||||||||||||| |||| |||||||||||||  ||||||||||||| ||| ||      
T  21387576 cctctggtcactaatataagcaaaaatccattttctagattcattcaattaatgatgtatgtagtctttattatataccacatacatcatttattaaatg 21387675  T
Q  435 tatctaaaagataaatttttgctt 458  Q
     ||||||||  |||| ||||||||    
T  21387676 aatctaaaaagtaaaattttgctt 21387699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 458
Target Start/End: Complemental strand, 25079354 - 25079224
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||||| ||||||||||||||||||| |||||| | ||| |||| ||||||||||||||||||| |||||   | || ||    ||||||||||||||||    
T  25079354 aatacatcctccggtcactaatataaacaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaggatcacatacatcattaa 25079255  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    |||||  |||||||||  || ||||||||||    
T  25079254 ttgaatgtatctaaaaagtagatttttgctt 25079224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 14995860 - 14995988
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactcttt--aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||| |||||||||||||| || | |||  ||| |||||||| ||||||  |||||||||||||| ||    |||| ||||||| |||    
T  14995860 tacaccctccggtcacaaatataagcaaaaatcaatgttttaaattcattcaataaatgatatatgtggtctttattgtagacaacatgcatcatttatt 14995959  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||   |||||||| || |||||||||||    
T  14995960 gaacgaatctaaaatatgaatttttgctt 14995988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 18234412 - 18234465
Alignment:
Q  402 ttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttg 455  Q
    |||||||||||||||||||||||||||||||  |||||||||  ||||||||||    
T  18234412 ttattatatgtcacatacatcattaattgaatgtatctaaaaattaaatttttg 18234465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 34275338 - 34275234
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa--ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||||  | ||  |||| || |||||| |||||||||||  | ||||||||||||   |||||||||||||||    
T  34275338 atacaccctccggtcactaatataagcaaaaaaactacattttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaa 34275239  T
Q  428 ttgaa 432  Q
     ||||    
T  34275238 atgaa 34275234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 40416901 - 40417029
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||| |||||||||||||||  |||  |||| |||||||||||||||||||||||||   | || || |   || ||||||||||||||    
T  40416901 tacaccctccggtcattaatataagcaaaaattcacaatttagatacattcaattaatgatgcatgtgacatataataaagaccatatacatcattaatt 40417000  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  | |||||||||||    
T  40417001 gaatgtatctaaaaagtgaatttttgctt 40417029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 46943942 - 46944006
Alignment:
Q  335 accctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtg 397  Q
    ||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||| |||||    
T  46943942 accctccggtcactaatataaacaaaaatccactttttagatacattcaattaatgatgtatgtg 46944006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 10414933 - 10415036
Alignment:
Q  331 atacaccctccggtcactaatataagc-aaaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||||||||||| |||||| ||  ||||  | |||| | |||||||||||  ||||||||||||||   |||||||||||||||     
T  10414933 atacaccctccggtcactaatataagcaaaaaactacattttaggttcattgatttaatgatgcacatggtctttattatagaccacatacatcattaaa 10415032  T
Q  429 tgaa 432  Q
    ||||    
T  10415033 tgaa 10415036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 16831275 - 16831346
Alignment:
Q  248 acattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    |||||||||  ||| |||||||||||  ||||||||| || || ||||||||||| ||||||||||||||||    
T  16831275 acattcaatgcattaaaactttaaaaagtaactttttttatttgaaatttatcaattattttcatttttgta 16831346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 427
Target Start/End: Original strand, 24935885 - 24935984
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||||| | ||  ||||  | |||||| |||||||| ||  ||||||||||||||  ||| ||||||||||||    
T  24935885 aatacaccctccggtcactaatataagcaaaaatctacattttaggttcattcatttaatgatacacatggtctttattataaatcatatacatcattaa 24935984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 2534039 - 2533957
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||||||| ||| || | ||||||||||||   ||||||||||||  |||||| | |||||||| ||||||||||||||    
T  2534039 cattcaattaataatgtatatagtctttattatacaccacatacatcatctattgaataaatctaaaatataaatttttgctt 2533957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 18662361 - 18662319
Alignment:
Q  277 aactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  18662361 aactttttctacttaaaatttatcaatgattttcatttttgta 18662319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 18662422 - 18662356
Alignment:
Q  203 cacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaacttt 269  Q
    |||||||||| |||  || |||| ||||||||||||| ||||||| |||||||| ||||||||||||    
T  18662422 cacttattaaaaagtttaaagaataaattttgtcttgaaaatgatgcattcaatgtattgaaacttt 18662356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 458
Target Start/End: Complemental strand, 22106814 - 22106684
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||| | |||||||||||| |||||   || | |||| ||||||||||||||||||| |||||   | || || |   |||||||||||||||    
T  22106814 aatacaccctctgatcactaatataaacaaaatttcattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaa 22106715  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    ||||| |||||||||| ||| ||||||||||    
T  22106714 ttgaatatatctaaaaaatagatttttgctt 22106684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 458
Target Start/End: Original strand, 40529537 - 40529667
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||| | |||||||||||| |||||   || | |||| ||||||||||||||||||| |||||   | || || |   |||||||||||||||    
T  40529537 aatacaccctctgatcactaatataaacaaaatttcattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaa 40529636  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    ||||| |||||||||| ||| ||||||||||    
T  40529637 ttgaatatatctaaaaaatagatttttgctt 40529667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 46683064 - 46683122
Alignment:
Q  259 attgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttg 317  Q
    |||||||||||||||  ||||||||| ||||||||||||| ||| ||||| ||||||||    
T  46683064 attgaaactttaaaatgtaactttttatacttaaaatttaccaattatttccatttttg 46683122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 226 - 319
Target Start/End: Original strand, 46096747 - 46096840
Alignment:
Q  226 gaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    ||||| || |||| |||||| | |||||| |  ||||||| |||||||  ||| ||||| || |||||||||||||| ||||||||||||||||    
T  46096747 gaaatattatcttagaaatggtgcattcagtgcattgaaattttaaaaagtaattttttttatttaaaatttatcaattattttcatttttgta 46096840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 3498393 - 3498337
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  3498393 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 3498337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 27242513 - 27242457
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||| |||||||||||||||||||||||||    |||||||||||| ||||||    
T  27242513 cattcaataaatgatgcatgtggtctttattatagacaacatacatcattcattgaa 27242457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 28003219 - 28003275
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||| ||||| ||||||||  |||||||  |||||||||||||||||||||    
T  28003219 cattcaattattgatgtatgtggtccatattataaatcacatacatcattaattgaa 28003275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 37066223 - 37066279
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| ||||||    ||||||||||||||||||||    
T  37066223 cattcaattaatgatgtatgtggtctatattatggaccacatacatcattaattgaa 37066279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 38663682 - 38663742
Alignment:
Q  259 attgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    |||||||||||||||  ||||||||| || |||||||||||||| |||||  |||||||||    
T  38663682 attgaaactttaaaaagtaactttttatatttaaaatttatcaattatttctatttttgta 38663742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 46477232 - 46477176
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  46477232 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 46477176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 46944016 - 46943976
Alignment:
Q  403 tattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  46944016 tattatatgtcacatacatcattaattgaatgtatctaaaa 46943976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 2297325 - 2297356
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  2297325 atacaccctccggtcactaatataagcaaaaa 2297356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 2360443 - 2360474
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  2360443 atacaccctccggtcactaatataagcaaaaa 2360474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 4406224 - 4406122
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactctttaa--tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||| ||| ||||||||||||||| |  | ||| |  | |||||| |||||||||||  ||||||||||||||   ||||||||||||||| |    
T  4406224 tacaccctccgatcattaatataagcaaaaaactatattttaagttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaat 4406125  T
Q  430 gaa 432  Q
    |||    
T  4406124 gaa 4406122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 4609583 - 4609654
Alignment:
Q  14 atatttacaatagttgcctgaacagagcataaaaacagaaaagaaactcttatcctatgcccaatatggtaa 85  Q
    |||||||||| ||| ||||  ||| |||| | |||| |||||| |||||||| |||||||||||||||||||    
T  4609583 atatttacaacagtcgcctatacaaagcaaataaacggaaaagtaactcttagcctatgcccaatatggtaa 4609654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 6455543 - 6455646
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||| |||||| ||||||||||||   ||  |||| || |||||| |||||||||||  ||||||||||||||   |||||||||||||||     
T  6455543 atacaccctccgatcactattataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaa 6455642  T
Q  429 tgaa 432  Q
    ||||    
T  6455643 tgaa 6455646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 8595293 - 8595262
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  8595293 atacaccctccggtcactaatataagcaaaaa 8595262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 10422954 - 10422923
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  10422954 atacaccctccggtcactaatataagcaaaaa 10422923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 458
Target Start/End: Complemental strand, 15051230 - 15051100
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa--ccactctttaatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||||||||||||||||| ||||||||||||||  |   | || ||| |||||||| ||| ||| |||||  ||||||| ||    | |||||||||| |    
T  15051230 aatacaccctccggtcacaaatataagcaaaaattcatgttttaaattcattcaataaataatgtatgtgacctttattgtagacaatatacatcattta 15051131  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    |||||  ||||||||| ||||||||||||||    
T  15051130 ttgaatgtatctaaaacataaatttttgctt 15051100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 361
Target Start/End: Original strand, 16777885 - 16777916
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaa 361  Q
    ||||||||||||||||||||||||||||||||    
T  16777885 aatacaccctccggtcactaatataagcaaaa 16777916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 34275181 - 34275216
Alignment:
Q  327 aataatacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||| ||||||||||||||||||||||||||    
T  34275181 aataatacatcctccggtcactaatataagcaaaaa 34275216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 43103062 - 43103097
Alignment:
Q  327 aataatacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||| ||||||||||||    
T  43103062 aataatacaccctccggtcactattataagcaaaaa 43103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 458
Target Start/End: Original strand, 716311 - 716357
Alignment:
Q  412 tcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||||||||||||||||  |||||||||  |||||||||||||    
T  716311 tcacatacatcattaattgaatgtatctaaaaattaaatttttgctt 716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 425
Target Start/End: Original strand, 7295100 - 7295146
Alignment:
Q  379 tcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||| ||  ||||||||||||||||| ||||||||||||||    
T  7295100 tcaattaatgttgtttgtggtctttattatatatcacatacatcatt 7295146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 8447712 - 8447742
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  8447712 tacaccctccggtcactaatataagcaaaaa 8447742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 8571527 - 8571497
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  8571527 tacaccctccggtcactaatataagcaaaaa 8571497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 28949420 - 28949390
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  28949420 tacaccctccggtcactaatataagcaaaaa 28949390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 42589756 - 42589694
Alignment:
Q  255 atatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttg 317  Q
    |||||||||||||| |||| | |||||||| ||| ||||||||| |||  |||||||||||||    
T  42589756 atatattgaaacttaaaaaaacaactttttttacataaaatttaccaataattttcatttttg 42589694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 46648773 - 46648743
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaa 361  Q
    |||||||||||||||||||||||||||||||    
T  46648773 atacaccctccggtcactaatataagcaaaa 46648743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 310
Target Start/End: Complemental strand, 49111293 - 49111259
Alignment:
Q  276 taactttttctacttaaaatttatcaactattttc 310  Q
    ||||||||||||| |||||||||||||||||||||    
T  49111293 taactttttctacctaaaatttatcaactattttc 49111259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 8566310 - 8566261
Alignment:
Q  259 attgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||||||||||| || | ||||||||| ||||||||||||| |||||    
T  8566310 attgaaactttaaaaaattaatttttctacataaaatttatcaattattt 8566261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 361
Target Start/End: Original strand, 8571377 - 8571406
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaa 361  Q
    ||||||||||||||||||||||||||||||    
T  8571377 tacaccctccggtcactaatataagcaaaa 8571406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 28949323 - 28949372
Alignment:
Q  383 ttaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||| ||||||||||||||   ||||||||||||||| ||||    
T  28949323 ttaatgatgcatatggtctttattatagaccacatacatcattaaatgaa 28949372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 33471589 - 33471516
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaa 449  Q
    |||||||||||||||| ||||||||| || |||    ||||||||||||||||||||   |||||||| |||||    
T  33471589 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaatctaaaaaataaa 33471516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 4407765 - 4407713
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattca 381  Q
    ||||||||||||||||||||||||| |||||| ||||| |||| |||||||||    
T  4407765 atacaccctccggtcactaatataaacaaaaatccactttttagatacattca 4407713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 6455696 - 6455664
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||| |||||||||||||||||||    
T  6455696 aatacaccctccgatcactaatataagcaaaaa 6455664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 19531994 - 19532050
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||    |||||||||||||||||||    
T  19531994 cattcaattaatgatgtatgtggtccatattataaactacatacatcattaattgaa 19532050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 26385724 - 26385668
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||| ||||||||||| |||||||||||||||||   ||||||||| ||| ||||||    
T  26385724 catttaattaatgatgtatgtggtctttattatagaccacatacataatttattgaa 26385668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 26824899 - 26824931
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||| ||||||||||||    
T  26824899 aatacaccctccggtcactagtataagcaaaaa 26824931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 26980308 - 26980244
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaa 273  Q
    |||||||  ||| ||||||||||||||||||| | |||| ||||||||| ||| |||||| ||||    
T  26980308 ttaagaatcctaaagaagaaattttgtcttgggattgatgcattcaatacattaaaacttgaaaa 26980244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 30005917 - 30005973
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||| | ||||||||| || |||   |||||||||||||||||||||    
T  30005917 cattcaattaatgacgtatgtggtctataatatgaatcacatacatcattaattgaa 30005973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 33471531 - 33471587
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   |||||||   ||||||||||||||||||||    
T  33471531 cattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaa 33471587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 36595367 - 36595419
Alignment:
Q  203 cacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaa 255  Q
    ||||| || ||||| ||| ||| |||||||||||||||||||||| |||||||    
T  36595367 cacttctttagaagtctaaagaggaaattttgtcttggaaatgatgcattcaa 36595419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 37066281 - 37066225
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  || ||||   ||||||||||||||||||||    
T  37066281 cattcaattaatgatgtatgtggtccataatatagaccacatacatcattaattgaa 37066225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 46152336 - 46152239
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||| ||| |||||||||||| |||||| | |||| ||||||| | ||||||| || |||  || | ||||||||| |||| |||||||| |||||    
T  46152336 ttaagaagcctaaagaagaaattttttcttgggattgatgcattcaacacattgaaatttgaaa--atgaatttttctacataaagtttatcaattattt 46152239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 46221177 - 46221121
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||| ||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  46221177 catttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 46221121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 51239237 - 51239366
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||  |||||||| |||||||||||||||||||||||||||    
T  51239237 atacaccctccggtcactaatataagcaaaaatctactctttagatacattcaactaatgatatatgtggtccttattatatgtcacatacatcattaat 51239336  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  ||||||||| ||| ||||||||||    
T  51239337 tgaatgtatctaaaaaatagatttttgctt 51239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 36362599 - 36362727
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacca-ctctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  36362599 tacaccctccggtcactaatataagcaaaaatcaactctttaaatacatttaattaatgatgtatgtggtccttattatatgtcacatacatcattaatt 36362698  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  || ||||||||||    
T  36362699 gaatgtatctaaaaagtagatttttgctt 36362727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 51617478 - 51617363
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||||  ||||| |||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  51617478 aatacaccctccggtcactaatataagcaaaattccactttttagatacattcaattaatgttgtatgtggtctttattatatgtcacatacatcattaa 51617379  T
Q  428 ttgaaaatatctaaaa 443  Q
    |||||  |||||||||    
T  51617378 ttgaatgtatctaaaa 51617363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 52931635 - 52931749
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||| |||||||||||||||||||||||||  || |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52931635 atacacactccggtcactaatataagcaaaaattcattctttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaat 52931734  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  52931735 tgaatgtatctaaaa 52931749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 21404039 - 21403939
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactctttaatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattga 431  Q
    ||||||||||||||||||||||||||||||| |  | ||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21404039 tacaccctccggtcactaatataagcaaaaatccattttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattga 21403940  T
Q  432 a 432  Q
    |    
T  21403939 a 21403939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 331 - 455
Target Start/End: Original strand, 38455159 - 38455285
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||| ||||||||||||||| ||||| |||| ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||    
T  38455159 atacaccctccggtcattaatataagcaaaaatccactttttagatacattaatttaatgatgtatgtggtctttattatatgtcacatacatcattaat 38455258  T
Q  429 tgaaaatatctaaaagataaatttttg 455  Q
    | ||  |||||||||  ||||||||||    
T  38455259 taaatgtatctaaaaagtaaatttttg 38455285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 41349806 - 41349703
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactctttaa--tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||||||||||||||| ||| | ||| |  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41349806 tacaccctccggtcactaatataagcaaaaatccatttttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaat 41349707  T
Q  429 tgaa 432  Q
    ||||    
T  41349706 tgaa 41349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 50260927 - 50261030
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  50260927 atacaccctccggttactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaa 50261026  T
Q  429 tgaa 432  Q
    ||||    
T  50261027 tgaa 50261030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 29565255 - 29565126
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||| |||||||||| |||||||||||||||  |||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  29565255 atacatcctccggtcattaatataagcaaaaattcactttttacatacattcaattaatgatatatgtggtctttattatatgtcacatacatcattaat 29565156  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    | ||  ||||||||| ||  ||||||||||    
T  29565155 taaatgtatctaaaaaattgatttttgctt 29565126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 332 - 455
Target Start/End: Original strand, 42449100 - 42449225
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||  ||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  42449100 tacaccctatggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacattcatcattaatt 42449199  T
Q  430 gaaaatatctaaaagataaatttttg 455  Q
    |||  ||| ||||| ||| |||||||    
T  42449200 gaatgtatttaaaaaatatatttttg 42449225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 52168429 - 52168300
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||| ||| ||||||||||| ||||| |||| ||||||| | ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  52168429 atacaccctccggtcattaacataagcaaaaatccactttttagatacattaatttaatgatgtatgtggtctttattatatgccacatacatcattaat 52168330  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    | ||  |||||||||  |||||||||||||    
T  52168329 taaatgtatctaaaaagtaaatttttgctt 52168300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 347 - 443
Target Start/End: Original strand, 52315400 - 52315498
Alignment:
Q  347 ctaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    |||||||||||||||| ||||| |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  52315400 ctaatataagcaaaaatccactttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaa 52315498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 432
Target Start/End: Complemental strand, 29720218 - 29720119
Alignment:
Q  335 accctccggtcactaatataagcaaaaac-cactctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||||||||||||||||  |||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  29720218 accctccggtcactaatataagcaaaaattcactttttaaatacatttaattaatgatgtatgtggtctttattatatgtcacatatatcaataattgaa 29720119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 29512276 - 29512163
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||| ||||| |||||||||||   | | |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29512276 tacaccctccggttactaacataagcaaaaatttattttttagatacatttaattaatgatgtatgtggtctttattatatgtcacatacatcattaatt 29512177  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  29512176 gaatgtatctaaaa 29512163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 296
Target Start/End: Complemental strand, 1402100 - 1402014
Alignment:
Q  210 taagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatt 296  Q
    ||||||||||| ||||||||| |||||||||||||| | ||||||||  |||||||||||||||  |||||||||||||||||||||    
T  1402100 taagaagactaaagaagaaatgttgtcttggaaatggtgcattcaatgcattgaaactttaaaatgtaactttttctacttaaaatt 1402014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 4741168 - 4741093
Alignment:
Q  13 aatatttacaatagttgcctgaacagagcataaaaa-cagaaaagaaactcttatcctatgcccaatatggtaaac 87  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||||    
T  4741168 aatatatacaatagttgcctgaacagagcataaaaaacagaaaagaaactcttagcctatgcctaaaatggtaaac 4741093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 331 - 443
Target Start/End: Complemental strand, 33412611 - 33412497
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||| |||  | | ||  |||||||||||||||||    
T  33412611 atacaccctccagtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctaaaatttagatcacatacatcattaat 33412512  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  33412511 tgaatgtatctaaaa 33412497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 372 - 432
Target Start/End: Complemental strand, 17552580 - 17552520
Alignment:
Q  372 aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  17552580 aatacattcaattaacgatgtatgtggtctttattatatgtcacatacattattaattgaa 17552520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 33412460 - 33412573
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||| |||||||| |||||||||||| ||||| |||| ||||||||||||||||||| ||||| |||  ||| ||  |||||||||||||||||    
T  33412460 atacaccctctggtcacta-tataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctaaattttagatcacatacatcattaat 33412558  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  33412559 tgaatgtatctaaaa 33412573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 45153502 - 45153612
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||  ||| |||| ||||||| ||||| ||||| | ||||||||  |||||||||||| ||  ||||||||||||||||||||||||||| |||||    
T  45153502 ttaagaattctaaagaataaattttatcttgaaaatggtgcattcaatgcattgaaactttataaagtaactttttctacttaaaatttatcaattattt 45153601  T
Q  309 tcatttttgta 319  Q
     || |||||||    
T  45153602 ccacttttgta 45153612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 443
Target Start/End: Complemental strand, 22099880 - 22099811
Alignment:
Q  374 tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||| ||||||||||  |||||||||    
T  22099880 tacattcaattaatgatgtatgtagtttttattatatgtcacatacattattaattgaatgtatctaaaa 22099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 458
Target Start/End: Complemental strand, 22173897 - 22173812
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||||||||| | | |||| || ||||||||||||||||||||||||||||||||  |||||||||  || ||||||||||    
T  22173897 atacattcaattaataaagtatgtagtttttattatatgtcacatacatcattaattgaatgtatctaaaatgtagatttttgctt 22173812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 31437802 - 31437906
Alignment:
Q  214 aagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatt 313  Q
    ||||||| | |||||||||||||||  ||||    ||||||||| ||| ||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  31437802 aagactaaaaaagaaattttgtcttaaaaatagcgcattcaatacattcaaactttaaaaaataactttttctatttaaaa-ttatcaattattttcatt 31437900  T
Q  314 tttgta 319  Q
    ||||||    
T  31437901 tttgta 31437906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 316
Target Start/End: Original strand, 44720854 - 44720961
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||| |||||||||||||||||||||| ||||| | ||||||||  ||| ||||||| |||  |||||||||  || ||||||||| ||| |||||    
T  44720854 ttaagaagtctagagaagaaattttgtcttgaaaatggtgcattcaatgcattaaaactttcaaaagtaactttttgaacataaaatttaccaattattt 44720953  T
Q  309 tcattttt 316  Q
     |||||||    
T  44720954 ccattttt 44720961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 458
Target Start/End: Original strand, 12744894 - 12745024
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||| ||||||||||||||| |||||||||||||  ||  |||| || |||||||||||||||| || ||||||||||||||   ||||||||||||| |    
T  12744894 aatagaccctccggtcactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcattta 12744993  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
     ||||  |||||||||  | |||||||||||    
T  12744994 atgaatgtatctaaaatgttaatttttgctt 12745024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 23070829 - 23070939
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||| ||| |||||||||||| ||||| || ||||  |||||||  ||||||| ||||||| | |||||||| || ||||| ||| |||| |||||    
T  23070829 ttaagaagtctaaagaagaaattttatcttgtaattgatgtattcaatgaattgaaattttaaaaaacaactttttataattaaattttttcaattattt 23070928  T
Q  309 tcatttttgta 319  Q
    |||||||||||    
T  23070929 tcatttttgta 23070939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 51617323 - 51617393
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtg 397  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||| |||||    
T  51617323 taatacaccctccggtcactaatataaccaaaaatccactttttagatacattcaattaatgatgtatgtg 51617393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 32759012 - 32759085
Alignment:
Q  381 aattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaattttt 454  Q
    ||||||||||| | |||||||||||||||| ||||||| |||||||||| || ||||||||||  |||||||||    
T  32759012 aattaatgatgtacgtggtctttattatatatcacatatatcattaattaaatatatctaaaaagtaaattttt 32759085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 443
Target Start/End: Complemental strand, 52315538 - 52315422
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatta 426  Q
    |||||||| ||||| |||||| |||||||||||| ||||| |||| ||||||||||||||||||| |||||   | || || |   ||||||||||||||    
T  52315538 taatacactctccgatcactagtataagcaaaaatccactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcatta 52315439  T
Q  427 attgaaaatatctaaaa 443  Q
    |||||| ||||||||||    
T  52315438 attgaatatatctaaaa 52315422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 7981186 - 7981268
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||| |||||||||||||||||||||| ||    ||||| |||||| |||||| | |||||||| ||||||||||||||    
T  7981186 cattcaataaatgatgcatgtggtctttattgtagacaacatatatcatttattgaataaatctaaaatataaatttttgctt 7981268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 332 - 432
Target Start/End: Original strand, 25881131 - 25881233
Alignment:
Q  332 tacaccctccggtcactaatataagc-aaaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||| |||||| ||  ||||  | |||||| |||||||||||  ||||||||||||||   ||||||||||||||| |    
T  25881131 tacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaat 25881230  T
Q  430 gaa 432  Q
    |||    
T  25881231 gaa 25881233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 425
Target Start/End: Complemental strand, 10872818 - 10872722
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaaccactctttaata--cattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    ||||||||||||||||||| ||||||||||||    | ||| | |  |||||||||||||||| || ||||||||||||||  ||||||||||||||    
T  10872818 atacaccctccggtcactattataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcatt 10872722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 37492475 - 37492402
Alignment:
Q  381 aattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaattttt 454  Q
    ||||||||||  |||  ||||||||||||||||| ||||||| |||||||||  ||||||||| ||||||||||    
T  37492475 aattaatgatatatgccgtctttattatatgtcatatacatcgttaattgaatgtatctaaaaaataaattttt 37492402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 443
Target Start/End: Original strand, 41349655 - 41349768
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactctt-taatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||||||||  |||| ||  |||||||||||||||||||| |||||   | || || |   |||||||||||||||||    
T  41349655 tacaccctccggtcactaatataagcaaaaattcacttttaaaatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaatt 41349754  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  41349755 gaatgtatctaaaa 41349768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 51239389 - 51239321
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtg 397  Q
    |||||||||||||||||||||||||||||||| | | | |||| ||||||||||||||||||| |||||    
T  51239389 atacaccctccggtcactaatataagcaaaaatctattttttagatacattcaattaatgatgtatgtg 51239321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 23073658 - 23073753
Alignment:
Q  224 aagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    |||||||||| ||||| || || |  |||||||  ||||||||||||||| |||||||||| || ||||| ||| | || ||||||||||||||||    
T  23073658 aagaaattttatcttgtaattggtgtattcaatgaattgaaactttaaaacataactttttataattaaatttttttaattattttcatttttgta 23073753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 17552470 - 17552539
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactctt-taatacattcaattaatgatgcatgtg 397  Q
    |||||||||||||||||||||||||||||||||  |||| ||  |||||||||||||||| ||| |||||    
T  17552470 aatacaccctccggtcactaatataagcaaaaattcacttttaaaatacattcaattaataatgtatgtg 17552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 4204107 - 4204051
Alignment:
Q  263 aaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    |||||||||||  ||||||||| || |||||||||||||| |||||| |||||||||    
T  4204107 aaactttaaaaagtaactttttttatttaaaatttatcaattatttttatttttgta 4204051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 16127789 - 16127845
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  16127789 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 16127845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 21659237 - 21659181
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||  ||||||||| ||||||   |||||||||||||||||||||    
T  21659237 cattcaattaatgatatatgtggtctatattatgaatcacatacatcattaattgaa 21659181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 29565104 - 29565171
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactcttt--aatacattcaattaatgatgcatgtg 397  Q
    ||||||||||||||||||||||||||||||| || | |||   ||||||| ||||||||||| |||||    
T  29565104 tacaccctccggtcactaatataagcaaaaatcaattttttagatacatttaattaatgatgtatgtg 29565171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 50261081 - 50261049
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||||    
T  50261081 aatacaccctccggtcactaatataagcaaaaa 50261049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 398
Target Start/End: Original strand, 52168278 - 52168346
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtgg 398  Q
    |||||||||||||||||||||||||||||||   ||| |||| ||||||| ||||||||||| ||||||    
T  52168278 tacaccctccggtcactaatataagcaaaaatttactttttagatacatttaattaatgatgtatgtgg 52168346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 8439403 - 8439301
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactctttaa--tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||||||||    | ||| |  | |||||| |||||||||||  | ||||||||||||   ||||||||||||||| |    
T  8439403 tacaccctccggtcactaatataagcaaaaaattatattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaat 8439304  T
Q  430 gaa 432  Q
    |||    
T  8439303 gaa 8439301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 17005059 - 17005001
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatg--tcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || ||||||   ||||||||||||||||||||    
T  17005059 cattcaattaatgatgtatgtggtctataatatatggaccacatacatcattaattgaa 17005001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 443
Target Start/End: Original strand, 26121580 - 26121647
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    |||||||||||||||| || ||||||||||||||   ||||||||||||| | |||| | ||||||||    
T  26121580 cattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaataaatctaaaa 26121647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 443
Target Start/End: Original strand, 26244421 - 26244488
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    |||||||||||||||| || ||||||||||||||   ||||||||||||| | |||| | ||||||||    
T  26244421 cattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaataaatctaaaa 26244488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 443
Target Start/End: Original strand, 34935579 - 34935646
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    |||||||||||||||| ||||||||  |||| |   ||||||||||||||||||||| | ||||||||    
T  34935579 cattcaattaatgatgtatgtggtccatattttgaatcacatacatcattaattgaataaatctaaaa 34935646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 38677711 - 38677680
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  38677711 atacaccctccggtcactaatataagcaaaaa 38677680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 52685220 - 52685097
Alignment:
Q  196 cttagaacacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaat 295  Q
    |||| ||||||||||||||||  || |||||||||||  |||| |||||  | ||||||||  || |||||  |||||  ||| |||||||| |||||||    
T  52685220 cttacaacacttattaagaagtttaaagaagaaatttcatcttagaaattgtgcattcaatgcatagaaacgataaaaagtaaatttttctatttaaaat 52685121  T
Q  296 ttatcaactattttcatttttgta 319  Q
    ||| ||| |||||  |||||||||    
T  52685120 ttagcaattatttctatttttgta 52685097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 52931818 - 52931751
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtg 397  Q
    ||||||||||||||||| ||||||| ||||| | ||| |||| ||||||||||||||||||| |||||    
T  52931818 tacaccctccggtcactgatataagtaaaaatctactttttagatacattcaattaatgatgtatgtg 52931751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 443
Target Start/End: Original strand, 4181973 - 4182039
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    ||||||||||||||| ||||||||| || ||||  ||| |||||||||| |||||| | ||||||||    
T  4181973 attcaattaatgatgtatgtggtctataatatagatcatatacatcattgattgaataaatctaaaa 4182039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 23057092 - 23057202
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||||  || |||||||||||| || || || ||||  |||||||  ||| ||||||||||| || ||||||| || ||||| ||| |||| || ||    
T  23057092 ttaagaagtttaaagaagaaattttatcgtgtaattgatgtattcaatgaattaaaactttaaaaaatgactttttataattaaattttttcaattaatt 23057191  T
Q  309 tcatttttgta 319  Q
    |||||||||||    
T  23057192 tcatttttgta 23057202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 25881281 - 25881251
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  25881281 tacaccctccggtcactaatataagcaaaaa 25881251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 432
Target Start/End: Original strand, 38677560 - 38677662
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||| |||||||||||    ||  |||| || |||||| |||||||||||  ||||||||||||||   ||||||||||||||| |    
T  38677560 tacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaat 38677659  T
Q  430 gaa 432  Q
    |||    
T  38677660 gaa 38677662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 273
Target Start/End: Original strand, 40696114 - 40696184
Alignment:
Q  203 cacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaa 273  Q
    |||| ||||||||| ||| |||||||||||||||||  || |||||||||| | ||||| |||||| ||||    
T  40696114 cactcattaagaagcctaaagaagaaattttgtcttaaaattgatacattcgacatattaaaacttgaaaa 40696184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 410
Target Start/End: Complemental strand, 53683882 - 53683848
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatat 410  Q
    |||||||||||||||| ||||||||||||||||||    
T  53683882 cattcaattaatgatgtatgtggtctttattatat 53683848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 54987307 - 54987249
Alignment:
Q  259 attgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttg 317  Q
    |||||||||||||||  | | ||||||||||||||||||||||  ||||| ||||||||    
T  54987307 attgaaactttaaaaagttattttttctacttaaaatttatcatttatttacatttttg 54987249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 3020713 - 3020664
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||| || | ||||||||||||| ||| ||||||||||    
T  3020713 cattcaattaatgatgtatatagtctttattatatatcatatacatcatt 3020664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 5919424 - 5919457
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||| ||||||||||||||    
T  5919424 taatacaccctccggtcacaaatataagcaaaaa 5919457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Original strand, 18940047 - 18940092
Alignment:
Q  413 cacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||||||||||||||  ||| ||||| ||||||||||||||    
T  18940047 cacatacatcattaattgaatgtatataaaatataaatttttgctt 18940092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 458
Target Start/End: Original strand, 29512209 - 29512254
Alignment:
Q  413 cacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  29512209 cacatacatcattaattaaatgtatctaaaaaataaatttttgctt 29512254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 397
Target Start/End: Complemental strand, 36362750 - 36362682
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtg 397  Q
    ||||||||||||| ||| ||||||||||||||| | ||| |||| ||||||||||||||||||| |||||    
T  36362750 aatacaccctccg-tcattaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtg 36362682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 40065420 - 40065371
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||| || |||||||||||||||   ||||||||||||    
T  40065420 cattcaattaatgatgtatatggtctttattatatactacatacatcatt 40065371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 361
Target Start/End: Complemental strand, 40470563 - 40470534
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaa 361  Q
    ||||||||||||||||||||||||||||||    
T  40470563 tacaccctccggtcactaatataagcaaaa 40470534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 48600645 - 48600702
Alignment:
Q  251 ttcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||| |||||||||||||||  ||| ||||||||| |||||||||| || |||||    
T  48600645 ttcaatacattgaaactttaaaaagtaattttttctacgtaaaatttataaattattt 48600702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 1044022 - 1043966
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||| ||||||||||| ||||| ||| ||||||| |  |||||||||||||||||||    
T  1044022 catttaattaatgatgtatgtgatctatattataagctacatacatcattaattgaa 1043966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 390
Target Start/End: Original strand, 29720071 - 29720131
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgat 390  Q
    |||||||||||||||||||||||| |||||| ||||| |||| || |||||||||| ||||    
T  29720071 tacaccctccggtcactaatataatcaaaaatccactttttagatgcattcaattattgat 29720131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 39530436 - 39530492
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   |||||||   ||||||||||||||||||||    
T  39530436 cattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaa 39530492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 39530494 - 39530438
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || |||    ||||||||||||||||||||    
T  39530494 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 39530438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 40326479 - 40326535
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   |||||||   ||||||||||||||||||||    
T  40326479 cattcaattaatgatgtatgtggttcatattataaaccacatacatcattaattgaa 40326535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 42595836 - 42595784
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||    
T  42595836 cattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 42595784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 44435273 - 44435217
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  44435273 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 44435217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 52638132 - 52638076
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  || ||||  |||||||||| ||||||||||    
T  52638132 cattcaattaatgatgtatgtggtcgataatataaatcacatacattattaattgaa 52638076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 54680588 - 54680532
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||| |||  ||||||   |||||||||||||||||||||    
T  54680588 cattcaattaatgatgtatgtagtccatattatgaatcacatacatcattaattgaa 54680532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 327 - 458
Target Start/End: Original strand, 120135 - 120268
Alignment:
Q  327 aataatacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcat 424  Q
    |||||||||||||||||||||||||||||||||||   |||| |||| ||||||||||||||||||| ||||||| |||||| ||| |||||||||||||    
T  120135 aataatacaccctccggtcactaatataagcaaaatttcactttttagatacattcaattaatgatgtatgtggtatttattgtatatcacatacatcat 120234  T
Q  425 taattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||  |||||||||  |||||||||||||    
T  120235 taattgaatgtatctaaaaagtaaatttttgctt 120268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 443
Target Start/End: Complemental strand, 120291 - 120177
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||||||||||||||||   ||| |||| ||||||||||||||||||| ||||| | |  | || ||  ||||||||||||||||    
T  120291 atacaccctccggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtgatatacaataaataccacatacatcattaat 120192  T
Q  429 tgaaaatatctaaaa 443  Q
    ||||  |||||||||    
T  120191 tgaatgtatctaaaa 120177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 3945 - 4073
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||||||||  |||| ||||| |||||| | ||||||||| |||||||||||||||||||||||||||| |||| |||    
T  3945 tacaccctccggtcactaatataagcaaaaatacactttttaaatacattaatttaatgatgtatgtggtctttattatatgtcacatacaacatttatt 4044  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  |||||||||||||    
T  4045 gaatgtatctaaaaagtaaatttttgctt 4073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 329 - 443
Target Start/End: Original strand, 30397717 - 30397832
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatta 426  Q
    ||||||||||||||||||||||||||| |||||| ||||  |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  30397717 taatacaccctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtatgtgg-ctttattatatgtcacatacatcatta 30397815  T
Q  427 attgaaaatatctaaaa 443  Q
    ||||||  |||||||||    
T  30397816 attgaatgtatctaaaa 30397832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 17773496 - 17773624
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||| |||| |||||||||||||| |||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  17773496 tacatcctctggtcactaatataaacaaaaatccactttttagatacattcaataaatgatgtatgtggtctttattatatatcacatacatcattaatt 17773595  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  || ||||||||||    
T  17773596 gaatgtatctaaaaagtagatttttgctt 17773624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 21998033 - 21998162
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||| |||||||||||||||||||  || | |||| ||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||    
T  21998033 atacaccctccgatcactaatataagcaaaaatacattttttagatacattcaattaataatgtatgtgatatttattatatgtcacatacatcattaat 21998132  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  |||||||||  || ||||||||||    
T  21998133 tgaatgtatctaaaaagtagatttttgctt 21998162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 330 - 458
Target Start/End: Original strand, 21506456 - 21506586
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||   | || || |  ||||||||||||||||    
T  21506456 aatacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcattaa 21506555  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    |||||  |||||||||  |||||||||||||    
T  21506556 ttgaatgtatctaaaaattaaatttttgctt 21506586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 21506608 - 21506495
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||| |||||||| |||||||||||||||   | | |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  21506608 tacaccatccggtcattaatataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaatt 21506509  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  21506508 gaatgtatctaaaa 21506495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 333 - 440
Target Start/End: Complemental strand, 30460757 - 30460648
Alignment:
Q  333 acaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattg 430  Q
    ||||||||| ||||||||||||||||||||   ||| |||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  30460757 acaccctccagtcactaatataagcaaaaatttactttttagatagattcaattaatgatgtatgtggtctttattatatatcacatacatcattgattg 30460658  T
Q  431 aaaatatcta 440  Q
    || |||||||    
T  30460657 aatatatcta 30460648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 28577595 - 28577724
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||| |||||||||||||||||||||  || | |||| ||||||| ||||||||    |||||||||||||||||| |||||||||| ||||||    
T  28577595 atacaccctcaggtcactaatataagcaaaaattcattttttagatacatttaattaatgggatatgtggtctttattatatatcacatacattattaat 28577694  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  |||||||||  || ||||||||||    
T  28577695 tgaatgtatctaaaaagtatatttttgctt 28577724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 17268050 - 17268110
Alignment:
Q  372 aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  17268050 aatacatttaattaatgatgtatgtggtctttattatatgtcacatacattattaattgaa 17268110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 31536305 - 31536437
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtct---ttattatatgtcacatacatcatt 425  Q
    |||||||||||||||||||||||||||||||| | ||| |||| ||||||| | ||||||||| ||||||| |   ||||||| |||||||| ||| |||    
T  31536305 atacaccctccggtcactaatataagcaaaaatcaactttttagatacatttatttaatgatgtatgtggtttttattattatgtgtcacatgcataatt 31536404  T
Q  426 aattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||  ||| |||||  |||||||||||||    
T  31536405 aattgaatgtatttaaaaagtaaatttttgctt 31536437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 17773648 - 17773533
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||| ||||| | | || || |   ||||||||||||| |    
T  17773648 aatacaccctccggtcactaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcattta 17773549  T
Q  428 ttgaaaatatctaaaa 443  Q
    |||||  |||||||||    
T  17773548 ttgaatgtatctaaaa 17773533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 319
Target Start/End: Complemental strand, 30456869 - 30456799
Alignment:
Q  249 cattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    ||||||||||||||||| |||||||  ||||||||| |||| |||||||||||| ||||| ||||||||||    
T  30456869 cattcaatatattgaaattttaaaaagtaactttttatactaaaaatttatcaattatttccatttttgta 30456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 21998184 - 21998056
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||| |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||| |||||   | || || || |||||||||| |||||||    
T  21998184 tacacccgccggtcaccaatataagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaatatcacatacattattaatt 21998085  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  ||||||||| ||  ||||||||||    
T  21998084 gaatgtatctaaaaaatgtatttttgctt 21998056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 203 - 319
Target Start/End: Original strand, 33605057 - 33605173
Alignment:
Q  203 cacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaa 302  Q
    ||||| |||||||||||| ||||||| |||||||||  || |  |||||| ||   ||| ||||||||||| ||||||||||| |||| |||||||||||    
T  33605057 cacttgttaagaagactaaagaagaatttttgtcttaaaatttgtacattgaaatcattaaaactttaaaatataactttttcaactttaaatttatcaa 33605156  T
Q  303 ctattttcatttttgta 319  Q
     |||| | |||||||||    
T  33605157 ttattcttatttttgta 33605173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 30397869 - 30397757
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactcttt--aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||||||| | || |||   ||||||||||||||||||| |||||   | || || | | |||||||||||||||||    
T  30397869 tacaccctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgtgacatataata-aagccacatacatcattaatt 30397771  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  30397770 gaatgtatctaaaa 30397757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 9200878 - 9200923
Alignment:
Q  42 ataaaaacagaaaagaaactcttatcctatgcccaatatggtaaac 87  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  9200878 ataaaaacagaaaagaaactcttagcctatgtccaatatggtaaac 9200923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 14310516 - 14310644
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||| ||||||||| ||||| | ||  ||||  | |||||| |||||||||||  |||||||||||||||  ||||||||||||||| |    
T  14310516 tacaccctccggtcattaatataagtaaaaatctacattttatgttcattcatttaatgatgcacatggtctttattatataccacatacatcattaaat 14310615  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||   |||||||| | | ||||||||||    
T  14310616 gaatgaatctaaaatacagatttttgctt 14310644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 432
Target Start/End: Complemental strand, 8146095 - 8145992
Alignment:
Q  331 atacaccctccggtcactaatataagca-aaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||||||||||||||||||||| ||||  ||  |||| || |||||| ||||||||| |  ||||||||||||||   |||||||||||||||     
T  8146095 atacaccctccggtcactaatataagcaaaaaattacattttagattcattcatttaatgatgtacatggtctttattatagaccacatacatcattaaa 8145996  T
Q  429 tgaa 432  Q
    ||||    
T  8145995 tgaa 8145992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 3686811 - 3686889
Alignment:
Q  230 ttttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||| ||| | ||||| || ||||| |||| || |||||    
T  3686811 ttttgtcttggaaatgatgcattcaagatattgaaagtttaaaaaatagcattttcgacataaaacttataaattattt 3686889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 6560802 - 6560700
Alignment:
Q  332 tacaccctccggtcactaatataagca-aaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||| ||||  ||  |||| || |||||| |||||||||||  | ||||||||||||   ||||||||||||||| |    
T  6560802 tacaccctccggtcactaatataagcaaaaaattacattttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaat 6560703  T
Q  430 gaa 432  Q
    |||    
T  6560702 gaa 6560700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 316
Target Start/End: Original strand, 10228329 - 10228414
Alignment:
Q  230 ttttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcattttt 316  Q
    |||| ||||||||||||| ||||||| | ||| ||| |||||||| ||| |||||||||  ||||||||| || |||||||||||||    
T  10228329 ttttttcttggaaatgatgcattcaagacattaaaagtttaaaag-taattttttctacaaaaaatttataaattattttcattttt 10228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 458
Target Start/End: Original strand, 30460615 - 30460736
Alignment:
Q  339 tccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaata 436  Q
    |||||||| ||||||||||||||| ||||| | || ||| ||||||| ||||||| ||||| | | || || |   ||||||||||||||||||||  ||    
T  30460615 tccggtcaataatataagcaaaaatccactttgtagatatattcaatcaatgatgtatgtgatatataataaagaccacatacatcattaattgaatcta 30460714  T
Q  437 tctaaaagataaatttttgctt 458  Q
    |||||||  |||||||||||||    
T  30460715 tctaaaaagtaaatttttgctt 30460736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 6048055 - 6047999
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   ||||||  ||||||||||||||||||||||    
T  6048055 cattcaattaatgatgtatgtggttcatattatgggtcacatacatcattaattgaa 6047999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 6560650 - 6560682
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||||    
T  6560650 aatacaccctccggtcactaatataagcaaaaa 6560682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 8082579 - 8082495
Alignment:
Q  202 acacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttct 286  Q
    |||||| |||||||| ||| | |||||||||||||||| ||||| | |||| |||  |||||||||||||||  ||| |||||||    
T  8082579 acacttcttaagaagtctaaataagaaattttgtcttgaaaatggtgcattaaatgcattgaaactttaaaaagtaattttttct 8082495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 8449721 - 8449591
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactctttaata--cattcaattaatgatgcatgtggtctttattatat--gtcacatacatcattaa 427  Q
    |||| ||||||||||||| ||||||||||||  | | ||| | |  ||||||||||||||||||| || |||| |||||||    ||||||||||||| |    
T  8449721 tacatcctccggtcactattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattatatagaccacatacatcattta 8449622  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    ||||| | ||| |||| || |||||||||||    
T  8449621 ttgaataaatccaaaatattaatttttgctt 8449591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 8458525 - 8458395
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactctttaata--cattcaattaatgatgcatgtggtctttattatat--gtcacatacatcattaa 427  Q
    |||| ||||||||||||| ||||||||||||  | | ||| | |  ||||||||||||||||||| || |||| |||||||    ||||||||||||| |    
T  8458525 tacatcctccggtcactattataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattatatagaccacatacatcattta 8458426  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    ||||| | ||| |||| || |||||||||||    
T  8458425 ttgaataaatccaaaatattaatttttgctt 8458395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 401
Target Start/End: Original strand, 4844284 - 4844355
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtct 401  Q
    |||||||| |||||| |||||||||||||||  || | |||| ||||||||||||||||||| |||||||||    
T  4844284 tacacccttcggtcagtaatataagcaaaaaatcattttttagatacattcaattaatgatgtatgtggtct 4844355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 3012401 - 3012483
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||| ||||||| |||||||||||||| ||    |||||||||||| ||||||   |||||||| || |||||||||||    
T  3012401 cattcaataaatgatgtatgtggtctttattgtaaacaacatacatcatttattgaatgaatctaaaacatgaatttttgctt 3012483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 432
Target Start/End: Complemental strand, 3212338 - 3212284
Alignment:
Q  378 ttcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||| ||||||||  || ||||  |||||||||||||||||||||    
T  3212338 ttcaattaatgatgtatgtggtccataatataaatcacatacatcattaattgaa 3212284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 8145943 - 8145973
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  8145943 tacaccctccggtcactaatataagcaaaaa 8145973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 14310666 - 14310636
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  14310666 tacaccctccggtcactaatataagcaaaaa 14310636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 31398221 - 31398251
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||||||||    
T  31398221 tacaccctccggtcactaatataagcaaaaa 31398251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 31398371 - 31398269
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||| |||||||||||    ||  |||| || |||||| |||||||||||  ||||||||||||||   ||||||||||||||| |    
T  31398371 tacaccctccggtcactattataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaat 31398272  T
Q  430 gaa 432  Q
    |||    
T  31398271 gaa 31398269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 453
Target Start/End: Original strand, 15467614 - 15467691
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttt 453  Q
    |||| ||||| ||||| ||||| ||| |||||||  |||||||||||||||||||||   |||| ||| |||||||||    
T  15467614 catttaattattgatgtatgtgatctatattataaatcacatacatcattaattgaatgaatctgaaaaataaatttt 15467691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 2033210 - 2033266
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||||||||  |||||| | ||||||| | || |||||||||||||||||    
T  2033210 cattcaattaatgatgtttgtggtatatattataggccaaatacatcattaattgaa 2033266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 7418974 - 7418918
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||| ||||||||||| ||||||||| ||||||    ||||||||||||||||||||    
T  7418974 cattaaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaa 7418918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 10731514 - 10731570
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||| ||||||||| ||||| ||| |||||||   ||||||||||||||||||||    
T  10731514 cattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaa 10731570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 10731572 - 10731516
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||| | || ||||  |||||||||||||||| ||||    
T  10731572 cattcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaa 10731516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 12349914 - 12349858
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||| ||||||||| ||||||||  ||||||  ||||||||||||||||| ||||    
T  12349914 cattcatttaatgatgtatgtggtccatattatgagtcacatacatcattaaatgaa 12349858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 18097207 - 18097175
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||||||||| ||||||    
T  18097207 aatacaccctccggtcactaatataaacaaaaa 18097175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 21478594 - 21478650
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   |||||||   ||||||||||||||||||||    
T  21478594 cattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaa 21478650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 21478652 - 21478596
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || |||    ||||||||||||||||||||    
T  21478652 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 21478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 13689681 - 13689553
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||| |||||||||||||||||||||||||  |||| |||| || |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  13689681 tacactctccggtcactaatataagcaaaaattcactttttagattcattcaattaataatgtatgttgtctttattatatgtcacatacatcattaatt 13689582  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  ||||||||| ||| ||||||||||    
T  13689581 gaatgtatctaaaaaatagatttttgctt 13689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 52817712 - 52817584
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| |    
T  52817712 tacaccctccggtcactaatataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatccttaaat 52817613  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  ||||| |||  | |||||||||||    
T  52817612 gaatgtatcttaaaagtgaatttttgctt 52817584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 332 - 457
Target Start/End: Complemental strand, 5418660 - 5418533
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||| |||||||||||||||||||   ||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5418660 tacaccctccgatcactaatataagcaaaaatttactttttagatacattgaattaatgatgtatgtggtctttattatatgtcacatacatcattaatt 5418561  T
Q  430 gaaaatatctaaaagataaatttttgct 457  Q
    |||  ||||||||| ||  |||||||||    
T  5418560 gaatgtatctaaaaaattgatttttgct 5418533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 24941116 - 24941233
Alignment:
Q  342 ggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatct 439  Q
    |||||||||||||||||||||  |||| |||| ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||  |||||    
T  24941116 ggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatatcaaatacatcattaattgaatgtatct 24941215  T
Q  440 aaaagataaatttttgct 457  Q
    ||||| | ||||||||||    
T  24941216 aaaaggtgaatttttgct 24941233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 41899075 - 41899173
Alignment:
Q  210 taagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||||||| ||||||||| |||||||||||||| | ||||||||  |||||||||||||||  ||||||||||||||||||||| ||||| |||||    
T  41899075 taagaagactaaagaagaaatattgtcttggaaatggtgcattcaatgcattgaaactttaaaatgtaactttttctacttaaaattcatcaattattt 41899173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 5281282 - 5281192
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacata 418  Q
    ||||||||||||||||||||||||||| |||||  |||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  5281282 aatacaccctccggtcactaatataagtaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacata 5281192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 5168521 - 5168615
Alignment:
Q  214 aagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    ||||||| ||||||||| || ||||||||||| | |||||||| |||||||| ||||||| |||| ||||||||||||||||| ||||| |||||    
T  5168521 aagactaaagaagaaatgttatcttggaaatggtgcattcaatgtattgaaattttaaaatataattttttctacttaaaattcatcaattattt 5168615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 8839775 - 8839684
Alignment:
Q  224 aagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttg 317  Q
    |||||||||||||||| |||| || ||||||||  ||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||||    
T  8839775 aagaaattttgtcttgaaaataatgcattcaatgcattgaaactttaaaa-ataac-ttttctacttaaaatttaccaattattttcatttttg 8839684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 443
Target Start/End: Original strand, 10031563 - 10031629
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| || ||||||||||    
T  10031563 attcaattaatgatgtatgtgatctttattatatgtcacatacattattaattaaatatatctaaaa 10031629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 458
Target Start/End: Complemental strand, 38539580 - 38539495
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    ||||||||||||||  ||| ||||||||||||||||||| || |||||||||| |||||| | || ||||| ||||||||||||||    
T  38539580 atacattcaattaactatgtatgtggtctttattatatgccatatacatcatttattgaataaatttaaaatataaatttttgctt 38539495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 55087861 - 55087776
Alignment:
Q  327 aataatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatat 410  Q
    |||| ||||||||||||||||||||||||||||||| | | | |||| ||||||||||||||||||| ||| ||||||||||||||    
T  55087861 aatagtacaccctccggtcactaatataagcaaaaatctaatttttagatacattcaattaatgatgtatgcggtctttattatat 55087776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 38868831 - 38868937
Alignment:
Q  203 cacttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaa 302  Q
    ||||| |||||||  ||| ||| ||||||||||||||| |||||| ||||||| | ||||||| |||||||  ||||||||||||| ||||| |||| ||    
T  38868831 cacttgttaagaaatctaaagaggaaattttgtcttgggaatgatgcattcaacacattgaaagtttaaaaagtaactttttctacataaaacttataaa 38868930  T
Q  303 ctatttt 309  Q
     ||||||    
T  38868931 ttatttt 38868937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 56328595 - 56328493
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||||||||||||||||||| | ||  |||| || |||||| |||||||||||| | ||||||||||||   ||||||||||||||| |    
T  56328595 tacaccctccggtcactaatataagcaaaaaactacattttagattcattcatttaatgatgcatatagtctttattatagaccacatacatcattaaat 56328496  T
Q  430 gaa 432  Q
    |||    
T  56328495 gaa 56328493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 14450951 - 14451049
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||||||||||| |||||| |||||||||||| | ||  |||| || |||||| |||||||||||  ||||||||||||||  ||||||||||||||||    
T  14450951 atacaccctccgatcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagatcacatacatcattaa 14451049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 462
Target Start/End: Complemental strand, 6243727 - 6243638
Alignment:
Q  373 atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctttagc 462  Q
    ||||||||||||||||||| || |  ||||| |||||| ||||||| || ||||||| ||  ||||||||| ||||||||||||| ||||    
T  6243727 atacattcaattaatgatgtatataatcttttttatatatcacatatattattaattaaatgtatctaaaaaataaatttttgctatagc 6243638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 19934632 - 19934761
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaa-accactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||| |||||||||||  ||||| |||| || |||||||| ||||||| ||||||||| | | ||    ||||||||||||| ||    
T  19934632 atacaccctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttat 19934731  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||   |||||||| ||| ||||||||||    
T  19934732 tgaatgaatctaaaaaatagatttttgctt 19934761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 29006981 - 29006852
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||| ||||||||||||| |||||||||||  ||||| ||||| | |||||||| ||||||| ||||||||| | | ||   |||||||||||||| ||    
T  29006981 atacatcctccggtcactattataagcaaaattccactttttaaattcattcaataaatgatgtatgtggtctatttaatggatcacatacatcatttat 29006882  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||   |||||||| ||| ||||||||||    
T  29006881 tgaatgaatctaaaaaatagatttttgctt 29006852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 40881526 - 40881477
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||    
T  40881526 cattcaattaatgatgtatatgatctttattatatgtcacatacatcatt 40881477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 415
Target Start/End: Complemental strand, 44156145 - 44156060
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcac 415  Q
    |||||||||| ||||||||||||||||||||  |||| |||| ||||||| |||||||||||  ||| ||||| ||||||||||||    
T  44156145 tacaccctcctgtcactaatataagcaaaaattcactttttagatacattgaattaatgatgtgtgtagtcttcattatatgtcac 44156060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 458
Target Start/End: Original strand, 54164807 - 54164936
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaa-accactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    ||||||||||||||||||| |||||||||||  ||||| |||| || |||||||| ||||||| ||||||||| | | ||    ||||||||||||| ||    
T  54164807 atacaccctccggtcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttat 54164906  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||   |||||||| ||| ||||||||||    
T  54164907 tgaatgaatctaaaaaatagatttttgctt 54164936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 3167223 - 3167167
Alignment:
Q  263 aaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    ||||||| ||| ||||| |||||||||||||||||| ||| ||||||||||||||||    
T  3167223 aaactttgaaaaataaccttttctacttaaaatttaccaattattttcatttttgta 3167167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 20542902 - 20542846
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| |||||||   ||||||||||||||||||||    
T  20542902 cattcaattaatgatgtatgtggtctatattataacccacatacatcattaattgaa 20542846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 42013187 - 42013243
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| |||||||   ||||||||||||||||||||    
T  42013187 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaa 42013243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 51126146 - 51126202
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| |||||||   ||||||||||||||||||||    
T  51126146 cattcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaa 51126202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 52281217 - 52281161
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    ||||||||||| |||||||||||||||||||||||   |||||||||||| ||||||    
T  52281217 cattcaattaaggatgcatgtggtctttattatatactacatacatcatttattgaa 52281161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 443
Target Start/End: Complemental strand, 4406340 - 4406273
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    |||||||||||||||| |||||||||||||||||   ||||||||||||| | |||| | ||||||||    
T  4406340 cattcaattaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatctaaaa 4406273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 432
Target Start/End: Complemental strand, 21884164 - 21884062
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaaccactctttaa--tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    ||||||||||||||| ||||||||||||||| |  | ||| |  | |||||| |||||||||||  ||||||||||||||   ||||||||||||||| |    
T  21884164 tacaccctccggtcattaatataagcaaaaaactatattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaat 21884065  T
Q  430 gaa 432  Q
    |||    
T  21884064 gaa 21884062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 458
Target Start/End: Complemental strand, 29224014 - 29223959
Alignment:
Q  403 tattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||  ||||||||||    
T  29224014 tattatatgtcacatatatcattaattgaatatatctaaaaaatggatttttgctt 29223959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 42563467 - 42563388
Alignment:
Q  209 ttaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaacttt-aaaagataactttttcta 287  Q
    ||||||||||||  ||||||||||| |||| |||||| | ||||||||  ||||||||||| |||| |||||||||||||    
T  42563467 ttaagaagactaaggaagaaattttatcttagaaatggtgcattcaatgcattgaaactttaaaaaaataactttttcta 42563388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 3784073 - 3784143
Alignment:
Q  237 ttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactatt 307  Q
    ||||||||||||||||||||  ||| |||||||||||   || ||||||||||||||||| ||||| ||||    
T  3784073 ttggaaatgatacattcaatgcattaaaactttaaaatcaaattttttctacttaaaattcatcaattatt 3784143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 6167846 - 6167916
Alignment:
Q  249 cattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatttttgta 319  Q
    ||||||||  |||||||||||||||  ||||||||| ||||||||||| ||||| |||||| |||| ||||    
T  6167846 cattcaatgcattgaaactttaaaatgtaactttttttacttaaaattcatcaattatttttatttgtgta 6167916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 425
Target Start/End: Original strand, 48603606 - 48603654
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||||| || |||||||||||  ||||||||||||||    
T  48603606 attcaattaatgatgcatatgatctttattatagatcacatacatcatt 48603654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 51126204 - 51126148
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || ||||   ||||||||||||||||||||    
T  51126204 cattcaattaatgatgtatgtggtctataatatagaccacatacatcattaattgaa 51126148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 3517105 - 3517160
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||||||||||   || ||||  |||||||||||||||||||||    
T  3517105 attcaattaatgatgcatgtggttcataatatagatcacatacatcattaattgaa 3517160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 6126802 - 6126767
Alignment:
Q  327 aataatacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||| ||||||||||||    
T  6126802 aataatacaccctccggtcactattataagcaaaaa 6126767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 21884012 - 21884043
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  21884012 atacaccctccggtcactaatataagcaaaaa 21884043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 361
Target Start/End: Complemental strand, 28702208 - 28702177
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaa 361  Q
    ||||||||||||||||||||||||||||||||    
T  28702208 aatacaccctccggtcactaatataagcaaaa 28702177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 49482026 - 49481995
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  49482026 atacaccctccggtcactaatataagcaaaaa 49481995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 56328443 - 56328474
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa 362  Q
    ||||||||||||||||||||||||||||||||    
T  56328443 atacaccctccggtcactaatataagcaaaaa 56328474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 6317015 - 6317073
Alignment:
Q  250 attcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattt 308  Q
    |||||| |||||||||| |||||| ||||||||||| |  ||||||||||||| |||||    
T  6317015 attcaacatattgaaacattaaaaaataactttttcaatataaaatttatcaattattt 6317073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 21587017 - 21586935
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttgctt 458  Q
    |||||||| ||||||| |||| |||| || |||| | ||||||||||||| ||||||  || |||||| ||||| ||||||||    
T  21587017 cattcaataaatgatgtatgtagtctataatataggacacatacatcatttattgaatttacctaaaaaataaacttttgctt 21586935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 361
Target Start/End: Original strand, 28702055 - 28702085
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaa 361  Q
    |||||||||||||||||||||||||||||||    
T  28702055 atacaccctccggtcactaatataagcaaaa 28702085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 425
Target Start/End: Original strand, 4484115 - 4484164
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||| || ||||||||||||||   |||||||||||||    
T  4484115 cattcaattaatgatgtatatggtctttattatagaccacatacatcatt 4484164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 16391473 - 16391526
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||||| || |||   ||||||||| ||||||||    
T  16391473 cattcaattaatgatgcatgtggtctgtaatatgaatcacatacaacattaatt 16391526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 24858618 - 24858687
Alignment:
Q  204 acttattaagaagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaa 273  Q
    |||| |||||||| |||  | ||||| ||||||||||||||||| ||||||||  ||||||| |||||||    
T  24858618 acttgttaagaagtctaacgtagaaactttgtcttggaaatgatgcattcaatgcattgaaattttaaaa 24858687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 4044339 - 4044395
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||| |||||||||||  ||||||||||||||   ||||||||||||||| ||||    
T  4044339 cattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaa 4044395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 8826957 - 8826885
Alignment:
Q  383 ttaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaagataaatttttg 455  Q
    ||||||||| || ||||||||||||||  |||||||||||||| | |||| | || ||||| | |||||||||    
T  8826957 ttaatgatgtatatggtctttattatagatcacatacatcatttaatgaataaatttaaaatacaaatttttg 8826885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 9011872 - 9011788
Alignment:
Q  349 aatataagcaaaaaccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||  |||| |||| || |||||| ||||||||| ||||||||| ||||||    ||||||||||||||| ||||    
T  9011872 aatataagcaaaattcactttttagattcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaa 9011788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 13743899 - 13743955
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||| ||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  13743899 catttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 13743955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 425
Target Start/End: Complemental strand, 18626805 - 18626757
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||||||||||||| || |||||||||||   |||||||||||||    
T  18626805 attcaattaatgatgcatatgatctttattataaaccacatacatcatt 18626757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 21003981 - 21004037
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| || ||||||  ||||||   ||||||||||||||||||||    
T  21003981 cattcaattaatgatgtatatggtctacattatagaccacatacatcattaattgaa 21004037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 425
Target Start/End: Original strand, 22493618 - 22493666
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcatt 425  Q
    |||||||| |||||| || ||||||||||||||  ||||||||||||||    
T  22493618 attcaattgatgatgtatatggtctttattatagatcacatacatcatt 22493666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 23329469 - 23329413
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||| ||||| ||||||||  |||||||   ||||||||||||||||||||    
T  23329469 cattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaa 23329413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 23710876 - 23710932
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||| ||||| ||||||||  |||||||   ||||||||||||||||||||    
T  23710876 cattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaa 23710932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 23754291 - 23754235
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||  ||||||||  |||||||   ||||||||||||||||||||    
T  23754291 cattcaattaatgatatatgtggtccgtattataaaccacatacatcattaattgaa 23754235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 24529614 - 24529670
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| |||||||   |||||||   ||||||||||||||||||||    
T  24529614 cattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaa 24529670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 24529672 - 24529616
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || |||    ||||||||||||||||||||    
T  24529672 cattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaa 24529616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 29978533 - 29978589
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  29978533 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 29978589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 32112413 - 32112357
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||    
T  32112413 cattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaa 32112357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 49481921 - 49481977
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||| |||||||||||  ||||||||||||||   ||||||||||||||| ||||    
T  49481921 cattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaa 49481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 49745562 - 49745506
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||| ||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  49745562 catttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaa 49745506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 316
Target Start/End: Complemental strand, 53333633 - 53333557
Alignment:
Q  240 gaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcattttt 316  Q
    ||||| || ||||||| ||||| ||| |||||||  ||||||||||||| | |||||||| || |||||| ||||||    
T  53333633 gaaataatgcattcaagatattaaaagtttaaaaagtaactttttctacatgaaatttataaattatttttattttt 53333557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 54164960 - 54164928
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaa 362  Q
    |||||||||||||||||||| ||||||||||||    
T  54164960 aatacaccctccggtcactattataagcaaaaa 54164928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 61307 - 61195
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||||||||||| |||||| ||||  |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  61307 tacaccctccggtcactaatataaacaaaaatccacattttagatacattcaattaatgatgtatgtgg-ctttattatatgtcacatacatcattaatt 61209  T
Q  430 gaaaatatctaaaa 443  Q
    |||  |||||||||    
T  61208 gaatgtatctaaaa 61195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 61156 - 61270
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaaccactcttt--aatacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    ||||||||||||||||||||||||||||||||| | || |||   ||||||||||||||||||| |||||   | || || | | |||||||||||||||    
T  61156 aatacaccctccggtcactaatataagcaaaaatcccttttttagatacattcaattaatgatgtatgtgacatataata-aagccacatacatcattaa 61254  T
Q  428 ttgaaaatatctaaaa 443  Q
    |||||  |||||||||    
T  61255 ttgaatgtatctaaaa 61270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 54533 - 54405
Alignment:
Q  332 tacaccctccggtcactaatataagcaaaaac-cactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||| |||| |||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||    
T  54533 tacaccatccgatcactaatataagcaaaaattcactctttagatacattcaattaatgatgtatgtggtccttattatatatcatatacatcattaatt 54434  T
Q  430 gaaaatatctaaaagataaatttttgctt 458  Q
    |||  |||||||||  || ||||||||||    
T  54433 gaatgtatctaaaaagtagatttttgctt 54405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 54382 - 54444
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatg 391  Q
    |||||||||||||| ||||||||||||||||| | ||| |||| |||||||||||||||||||    
T  54382 atacaccctccggttactaatataagcaaaaatctactttttagatacattcaattaatgatg 54444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 330 - 458
Target Start/End: Original strand, 246788 - 246918
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||||||| || |||||||||||||||||||||   ||| |||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  246788 aatacaccgtctggtcactaatataagcaaaaatttactttttagatacattcaattaatgatgtatgtggtttttattatatgtcagatacatcattaa 246887  T
Q  428 ttgaaaatatctaaaagataaatttttgctt 458  Q
    |||||  |||||||||  || ||||||||||    
T  246888 ttgaatgtatctaaaaagtagatttttgctt 246918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 458
Target Start/End: Complemental strand, 246941 - 246812
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaa-ccactcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaat 428  Q
    |||||||||| ||||| ||||||||||||||| | ||| |||| ||||||||||||||||||| || ||   | || || |   ||||||||||||||||    
T  246941 atacaccctctggtcattaatataagcaaaaatctactttttagatacattcaattaatgatgtatctgacatataataaaaaccacatacatcattaat 246842  T
Q  429 tgaaaatatctaaaagataaatttttgctt 458  Q
    ||||  |||||||||  |||||||||||||    
T  246841 tgaatgtatctaaaaagtaaatttttgctt 246812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 80073 - 79968
Alignment:
Q  214 aagactagagaagaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcatt 313  Q
    ||||||| ||||||||| |||| ||||||||| | || ||||| |||||||||||||||| |||||||||||||| ||||||| |||||  ||||| |||    
T  80073 aagactaaagaagaaatgttgtattggaaatggtgcactcaatgtattgaaactttaaaatataactttttctacataaaattcatcaataatttttatt 79974  T
Q  314 tttgta 319  Q
    | ||||    
T  79973 tatgta 79968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 443
Target Start/End: Complemental strand, 17306 - 17198
Alignment:
Q  338 ctccggtcactaatataagcaaaaac--cactctttaa-tacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaa 434  Q
    ||||| ||||||||||||| |||||   |||| ||||| |||||| ||||||||||  | ||||| |||||||| ||||||||||||||||||||||| |    
T  17306 ctccgatcactaatataagaaaaaaattcactttttaaatacatttaattaatgatatacgtggtttttattatgtgtcacatacatcattaattgaata 17207  T
Q  435 tatctaaaa 443  Q
    ||| |||||    
T  17206 tatataaaa 17198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 17161 - 17228
Alignment:
Q  331 atacaccctccggtcactaatataagcaaaaaccactcttta-atacattcaattaatgatgcatgtg 397  Q
    |||||||||||||||||||||||||||||||  |||| |||| ||| ||||||||||||||| |||||    
T  17161 atacaccctccggtcactaatataagcaaaattcactttttatatatattcaattaatgatgtatgtg 17228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 432
Target Start/End: Original strand, 6206 - 6310
Alignment:
Q  330 aatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaa 427  Q
    |||||||||||| ||||||||||||||||||||   ||  |||  || |||||| |||||||||||  ||||||||||||||  ||||||||||||||||    
T  6206 aatacaccctccagtcactaatataagcaaaaaattacattttcgattcattcatttaatgatgcacatggtctttattatagatcacatacatcattaa 6305  T
Q  428 ttgaa 432  Q
     ||||    
T  6306 atgaa 6310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 5429 - 5482
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaatt 429  Q
    |||||||||||||||| ||||||||| |||||||   |||||||||||||||||    
T  5429 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaatt 5482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 11625 - 11681
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||  |||||||   ||||||||||||||||||||    
T  11625 cattcaattaatgatgtatgtggtccatattatagaccacatacatcattaattgaa 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 11683 - 11627
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| || |||    ||||||||||||||||||||    
T  11683 cattcaattaatgatgtatgtggtctataatatggaccacatacatcattaattgaa 11627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 458
Target Start/End: Complemental strand, 7805 - 7674
Alignment:
Q  329 taatacaccctccggtcactaatataagcaaaaacc-actcttta-atacattcaattaatgatgcatgtggtctttattatatgtcacatacatcatta 426  Q
    |||||||  |||| ||||||| |||||||||||| | ||  |||| || |||||| |||||||||||  ||||||||||||||   ||||||||||||||    
T  7805 taatacatactcctgtcactattataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcatta 7706  T
Q  427 attgaaaatatctaaaagataaatttttgctt 458  Q
    | ||||   | |||||| ||| ||||||||||    
T  7705 aatgaacgaacctaaaatatagatttttgctt 7674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 316
Target Start/End: Complemental strand, 19213 - 19123
Alignment:
Q  226 gaaattttgtcttggaaatgatacattcaatatattgaaactttaaaagataactttttctacttaaaatttatcaactattttcattttt 316  Q
    |||||||| |||||| ||| ||| | |||  | ||||||||||||| |  |||||| |||||| ||||| | |||||||||||||||||||    
T  19213 gaaattttatcttgggaataatatagtcagcacattgaaactttaacaagtaacttgttctacataaaactcatcaactattttcattttt 19123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 443
Target Start/End: Complemental strand, 89696 - 89630
Alignment:
Q  377 attcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaaaatatctaaaa 443  Q
    ||||||||||||||| || || |||||||||||  |||||||||||||| | |||||  ||||||||    
T  89696 attcaattaatgatgtatatgatctttattatagatcacatacatcatttaatgaaagaatctaaaa 89630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 1667 - 1627
Alignment:
Q  101 tgaggaacaaaaatttcagtttctgtcttgtctcttgcctc 141  Q
    ||||| |||||||||||||||| ||||||||| ||||||||    
T  1667 tgagggacaaaaatttcagtttttgtcttgtcccttgcctc 1627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Original strand, 17475 - 17531
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||| ||||||||| ||||||||| |||||||   ||||||||||||||| ||||    
T  17475 cattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaa 17531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 38106 - 38050
Alignment:
Q  376 cattcaattaatgatgcatgtggtctttattatatgtcacatacatcattaattgaa 432  Q
    |||||||||||||||| ||||||||| ||||||    |||||||||||||| |||||    
T  38106 cattcaattaatgatgtatgtggtctatattatgaaccacatacatcattagttgaa 38050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University