View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7055_high_15 (Length: 241)
Name: NF7055_high_15
Description: NF7055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7055_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30917425 - 30917645
Alignment:
| Q |
1 |
atatacaatcagtatctaagcataatttttgaaatatatatgaaaataaaatgcgcattctcatgnnnnnnngggtacaatttgactacttctattgaga |
100 |
Q |
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| T |
30917425 |
atatacaatcagtatctaagcataatttttgaaatatatatgaaaataaaatgcgcattctcatgtttttttgggtacaatttgattacttttattgagg |
30917524 |
T |
|
| Q |
101 |
cagaacagcaatttgactacttttattgaggcaaaacagattttgaataataaacagaattaacaaatttcaaattcttgagtcctatagttccaagcaa |
200 |
Q |
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| T |
30917525 |
caaaacagcaatttgactacttttattgaggcaaaacagattttgaataataaacagaattaacaaatttcaaattcttgagtcctatagttccaagcaa |
30917624 |
T |
|
| Q |
201 |
ggggccaggaatagattccca |
221 |
Q |
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||||||||||||||||||||| |
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| T |
30917625 |
ggggccaggaatagattccca |
30917645 |
T |
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