View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7055_low_13 (Length: 299)
Name: NF7055_low_13
Description: NF7055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7055_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 27978098 - 27977870
Alignment:
| Q |
19 |
ccaacaacgtcttgaactcccataatgctggtaatcgaatgttgaagagcagttgggacattgcagtaggtcaaaataggtccttctatattgataataa |
118 |
Q |
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| T |
27978098 |
ccaacaacgtcttgaactcccataatgctggtaatcgaatgttgaagagcagttgggacattgcagtaggtcaaaataggtccttctatattgataataa |
27977999 |
T |
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| Q |
119 |
ttaatttgacttatgtatttggaatggtaaatagaatatataaaccnnnnnnngcgattgcggtccatttcaatttgttgctaatggagtatattggagt |
218 |
Q |
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| T |
27977998 |
ttaatttgatttatgtatttggaatggtaaatacaatatataaaccaaaaaaagcgattgtggtccatttcaatttgttgctaatggagtatattggagt |
27977899 |
T |
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| Q |
219 |
taaagaagtgtgttttggaagcaaatcaa |
247 |
Q |
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| T |
27977898 |
taaagaagtgtgttttggaagcaaatcaa |
27977870 |
T |
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