View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7055_low_22 (Length: 227)
Name: NF7055_low_22
Description: NF7055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7055_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 3924246 - 3924440
Alignment:
| Q |
18 |
ctttacaacccttacaaataagaactccatttcttcaacaaggtcatatctccttgtaagcttatcagcttcaaatgcagcattattgttaacactagtc |
117 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3924246 |
ctttacaacccttacaaataagaattccatttcttcaacaaggtcatatctccttgtaagcttatcagcttcaaatgcagcattattgttaacactagtc |
3924345 |
T |
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| Q |
118 |
tcctttggtgcattctcattatttgccattttcttaacctgcattgtacaaataactttattagctttattaccttatcatgcaagtgtagaataat |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
3924346 |
tcctttggtgcattctcattatttgccattttcttaacctgcattgtacaaataactt--ttagctttattaccttatcatgcaagtgtagaataat |
3924440 |
T |
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