View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7056_low_3 (Length: 369)
Name: NF7056_low_3
Description: NF7056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7056_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 20 - 353
Target Start/End: Complemental strand, 32172128 - 32171795
Alignment:
| Q |
20 |
ttaccaagcctatttcccgaccatgctctaacatccacacaatcatcactaccatcaatatcagcctctcaaccagagccgacagtaacaagttcaacaa |
119 |
Q |
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| T |
32172128 |
ttaccaagcctatttcccgaccatgctctaacatccacacaatcatcactaccatcaatatcagcctctcaaccagagccgacagtaacaagttcaacaa |
32172029 |
T |
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| Q |
120 |
agtgatcaccttccaattaccatcaatatcaaaccaaatcaggcactttacaatggatcgtgccgtgataaattttctcaatgctatcagctacgcaagt |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
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| T |
32172028 |
agtgatcaccttccaattaccatcaatatcaaaccaaatcaggcactttacaatggatcgtgccgtgataaattttctctatcctatcagctacgcaagt |
32171929 |
T |
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| Q |
220 |
tggatctcccaaccacttgtcattacaagccttgaccgagcacccatcaccaatagcccactcttcaaaaagagtgatatacgaccaagaagtaatcact |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
32171928 |
tggatctcccaaccacttgtcattacaagccttgaccgagcacccatcaccaatagcccactcttcaaaaagtgtgatatacgaccaagaagtaatcact |
32171829 |
T |
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| Q |
320 |
tcaataaaggaaaatgtggatttagcaataatgg |
353 |
Q |
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||||||||||||||||||| |||||||||||||| |
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| T |
32171828 |
tcaataaaggaaaatgtgggtttagcaataatgg |
32171795 |
T |
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