View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7056_low_4 (Length: 360)
Name: NF7056_low_4
Description: NF7056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7056_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 13 - 343
Target Start/End: Complemental strand, 38326322 - 38325994
Alignment:
| Q |
13 |
tggtgttcaatgatacaatgtgtgctactgctgattatccttgtataatctagatgatacattatgcatatataatatgaaagagattatatagttctgt |
112 |
Q |
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| T |
38326322 |
tggtgttcaatgatacaatgtg--ctactgctgattatccttgtataatatagatgatacattatgcatatataatatgaaagagattatatagttctgt |
38326225 |
T |
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| Q |
113 |
gtttagtttagtttagtcaatccctaaaactaaacgcttcagttgtgtatactacaattatcaatttatgaggttaagggaggacttctaaagtcattca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38326224 |
gtttagtttagtttagtcaatccctaaaactaaacgcttcagttgtgtatactacaattatcaatttatgaggttaagggaggacttctaaagtcattca |
38326125 |
T |
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| Q |
213 |
cattaaaaagctctttattcgatcctattcaatttgattcagttagaaaaactcttgtttttccagtcacattcaaagctgtatctatctctctccaaac |
312 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
38326124 |
cattaaaaagctcttgattcgatcctattcaatttgattcagttagaaaaactcttgtttttccagtcacattcaaagttgtatctatctctctccaaac |
38326025 |
T |
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| Q |
313 |
actttcagttgccaaagtgaaggtgcaatat |
343 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
38326024 |
actttcagttgccaaagtgaaggtgcaatat |
38325994 |
T |
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