View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7059_high_5 (Length: 274)
Name: NF7059_high_5
Description: NF7059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7059_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 44014337 - 44014092
Alignment:
| Q |
1 |
tcacccttcttcgttctgatgtcatttctggtctcaccattgccagccttgccattcctcaggtataacacacactaacttcttacatatgtctctgata |
100 |
Q |
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| T |
44014337 |
tcacccttcttcgttctgatgtcatttctggtctcaccattgccagccttgccattcctcaggtataacacacactaacttcttacatatgtctccgata |
44014238 |
T |
|
| Q |
101 |
tacttgatattgaagacttgtttggtgtcgagacatactatatttaattatttcattttgtgaaattaagacgtatctaatgtccactaatgtccaaaaa |
200 |
Q |
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||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| |
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| T |
44014237 |
tacttgatattgaagacgtgt---gtgtcgagacatactatatttaattatttcattttgtgaaattaagacatat----------ctgatgtccaaaaa |
44014151 |
T |
|
| Q |
201 |
tacgtggttacactcaattattttattttatgtaattaccattgatgttagtgtcgtgt |
259 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
44014150 |
tacgtggttacactcaattattttattttatgaaattaccattgatgttagtgtcgtgt |
44014092 |
T |
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