View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7060_high_6 (Length: 328)

Name: NF7060_high_6
Description: NF7060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7060_high_6
NF7060_high_6
[»] chr2 (74 HSPs)
chr2 (18-316)||(3423647-3423943)
chr2 (40-128)||(15866733-15866821)
chr2 (39-131)||(11513817-11513906)
chr2 (39-117)||(44606164-44606242)
chr2 (45-126)||(9478221-9478302)
chr2 (47-120)||(35459834-35459907)
chr2 (56-128)||(2416246-2416318)
chr2 (41-120)||(17952774-17952853)
chr2 (56-131)||(25609729-25609804)
chr2 (47-125)||(3102617-3102695)
chr2 (44-130)||(6926505-6926590)
chr2 (56-130)||(10143105-10143179)
chr2 (45-131)||(28803568-28803654)
chr2 (56-105)||(5045245-5045294)
chr2 (62-131)||(13630343-13630412)
chr2 (39-128)||(29430672-29430760)
chr2 (39-120)||(42817449-42817530)
chr2 (64-120)||(3458598-3458654)
chr2 (50-130)||(3673734-3673814)
chr2 (39-103)||(15173442-15173506)
chr2 (47-127)||(18962104-18962184)
chr2 (87-131)||(31740021-31740065)
chr2 (64-131)||(23143040-23143107)
chr2 (64-131)||(23554830-23554897)
chr2 (48-111)||(31461363-31461426)
chr2 (40-131)||(32694130-32694220)
chr2 (62-120)||(16946981-16947039)
chr2 (62-120)||(17017646-17017704)
chr2 (62-120)||(34339845-34339903)
chr2 (60-130)||(39929804-39929874)
chr2 (65-131)||(43199356-43199422)
chr2 (39-120)||(43808492-43808573)
chr2 (56-113)||(4026750-4026807)
chr2 (40-117)||(10150672-10150749)
chr2 (42-118)||(35809852-35809927)
chr2 (90-126)||(43173189-43173225)
chr2 (43-103)||(43431534-43431594)
chr2 (67-118)||(1939407-1939458)
chr2 (56-127)||(11344350-11344421)
chr2 (56-131)||(35755564-35755639)
chr2 (39-106)||(38239638-38239705)
chr2 (64-119)||(40837502-40837557)
chr2 (39-125)||(6547826-6547912)
chr2 (85-131)||(6993786-6993832)
chr2 (56-114)||(7825185-7825243)
chr2 (86-120)||(10646362-10646396)
chr2 (46-120)||(11863723-11863797)
chr2 (47-125)||(14209201-14209279)
chr2 (39-105)||(33197327-33197393)
chr2 (85-131)||(33942112-33942158)
chr2 (40-130)||(37053511-37053601)
chr2 (85-131)||(37292409-37292455)
chr2 (45-131)||(37766720-37766806)
chr2 (47-117)||(40672872-40672942)
chr2 (91-128)||(1160809-1160846)
chr2 (56-113)||(3611159-3611216)
chr2 (46-131)||(4550700-4550785)
chr2 (85-114)||(6988077-6988106)
chr2 (56-117)||(7282951-7283012)
chr2 (50-103)||(13864577-13864630)
chr2 (56-117)||(15171183-15171244)
chr2 (63-128)||(28039397-28039462)
chr2 (39-115)||(29503161-29503235)
chr2 (86-127)||(33944568-33944609)
chr2 (47-108)||(35252207-35252268)
chr2 (62-131)||(39983282-39983350)
chr2 (68-113)||(41407246-41407291)
chr2 (87-131)||(5043622-5043666)
chr2 (68-140)||(14666493-14666565)
chr2 (68-128)||(22681250-22681310)
chr2 (62-114)||(23747243-23747295)
chr2 (64-116)||(28933765-28933817)
chr2 (62-102)||(44119723-44119763)
chr2 (48-116)||(44458415-44458483)
[»] chr4 (66 HSPs)
chr4 (18-311)||(11917459-11917743)
chr4 (43-131)||(49219059-49219147)
chr4 (51-131)||(4071811-4071890)
chr4 (40-115)||(28581988-28582062)
chr4 (56-131)||(42321941-42322016)
chr4 (41-127)||(30024618-30024704)
chr4 (40-125)||(19422335-19422420)
chr4 (39-106)||(55599082-55599149)
chr4 (48-140)||(8422892-8422982)
chr4 (39-131)||(24193501-24193593)
chr4 (56-127)||(8130107-8130178)
chr4 (88-131)||(13949906-13949949)
chr4 (39-129)||(26883910-26884001)
chr4 (40-131)||(30207633-30207723)
chr4 (42-117)||(35743223-35743298)
chr4 (60-127)||(44119228-44119295)
chr4 (69-120)||(52735068-52735119)
chr4 (40-134)||(3549590-3549683)
chr4 (47-133)||(41606110-41606196)
chr4 (56-106)||(51044546-51044596)
chr4 (46-128)||(54325102-54325184)
chr4 (41-117)||(4191657-4191734)
chr4 (74-131)||(10192235-10192292)
chr4 (43-120)||(22684589-22684666)
chr4 (67-128)||(27623579-27623640)
chr4 (47-120)||(36734817-36734890)
chr4 (59-120)||(40865746-40865806)
chr4 (50-115)||(47970245-47970310)
chr4 (47-104)||(51555956-51556013)
chr4 (39-114)||(485997-486073)
chr4 (39-107)||(3249800-3249868)
chr4 (39-131)||(24443954-24444046)
chr4 (48-131)||(32920462-32920543)
chr4 (39-127)||(45128376-45128464)
chr4 (50-117)||(7022595-7022662)
chr4 (85-140)||(18630642-18630697)
chr4 (47-78)||(23819014-23819045)
chr4 (44-131)||(24160557-24160644)
chr4 (85-120)||(32724081-32724116)
chr4 (82-125)||(44007940-44007983)
chr4 (85-128)||(46859892-46859935)
chr4 (62-128)||(6364088-6364154)
chr4 (45-102)||(15511425-15511483)
chr4 (40-105)||(15969820-15969886)
chr4 (61-127)||(19040181-19040247)
chr4 (40-78)||(27321946-27321984)
chr4 (56-130)||(46013363-46013437)
chr4 (56-130)||(46247151-46247225)
chr4 (85-131)||(47119027-47119073)
chr4 (92-130)||(53192416-53192454)
chr4 (39-120)||(54414865-54414949)
chr4 (91-125)||(55437354-55437388)
chr4 (94-127)||(24091434-24091467)
chr4 (62-131)||(24160929-24160998)
chr4 (46-131)||(24929416-24929501)
chr4 (86-131)||(25434522-25434567)
chr4 (63-120)||(49803151-49803208)
chr4 (62-131)||(50745939-50746008)
chr4 (66-128)||(53626717-53626781)
chr4 (85-125)||(20936070-20936110)
chr4 (62-106)||(21193937-21193981)
chr4 (92-128)||(21952930-21952966)
chr4 (58-106)||(27968072-27968120)
chr4 (72-120)||(29194476-29194524)
chr4 (51-127)||(43372035-43372111)
chr4 (75-131)||(55870403-55870459)
[»] chr8 (49 HSPs)
chr8 (47-119)||(41620365-41620437)
chr8 (42-131)||(38561645-38561734)
chr8 (56-128)||(4558731-4558803)
chr8 (39-127)||(31884510-31884598)
chr8 (47-120)||(38874570-38874643)
chr8 (45-106)||(40728505-40728566)
chr8 (64-128)||(1470921-1470985)
chr8 (45-125)||(11494075-11494155)
chr8 (45-113)||(14482124-14482192)
chr8 (39-127)||(34788493-34788581)
chr8 (45-117)||(40357821-40357893)
chr8 (45-120)||(29056064-29056139)
chr8 (42-117)||(40280281-40280356)
chr8 (66-128)||(26820142-26820204)
chr8 (85-131)||(34770854-34770900)
chr8 (47-108)||(2364558-2364619)
chr8 (47-120)||(7026655-7026728)
chr8 (47-131)||(35298539-35298624)
chr8 (39-120)||(41336718-41336799)
chr8 (62-131)||(42597340-42597409)
chr8 (40-120)||(2699223-2699303)
chr8 (39-131)||(11056729-11056821)
chr8 (62-118)||(12224974-12225030)
chr8 (88-120)||(29262947-29262979)
chr8 (39-131)||(35869753-35869845)
chr8 (85-120)||(2100767-2100802)
chr8 (47-106)||(29699178-29699237)
chr8 (56-131)||(29973014-29973089)
chr8 (39-106)||(39392748-39392815)
chr8 (76-127)||(42237488-42237539)
chr8 (85-131)||(3537093-3537139)
chr8 (56-130)||(3945207-3945281)
chr8 (62-128)||(12361131-12361197)
chr8 (47-117)||(14949812-14949882)
chr8 (62-120)||(26215435-26215493)
chr8 (86-120)||(27728094-27728128)
chr8 (47-113)||(31315533-31315598)
chr8 (47-117)||(34563174-34563244)
chr8 (55-128)||(1112785-1112858)
chr8 (39-128)||(28769404-28769493)
chr8 (64-128)||(31705025-31705090)
chr8 (47-128)||(33209285-33209366)
chr8 (47-127)||(787172-787252)
chr8 (40-120)||(4510945-4511025)
chr8 (92-128)||(7878551-7878587)
chr8 (58-102)||(10062218-10062262)
chr8 (41-101)||(10939325-10939385)
chr8 (90-134)||(11376670-11376714)
chr8 (87-127)||(35374439-35374479)
[»] chr5 (55 HSPs)
chr5 (39-130)||(35135725-35135816)
chr5 (39-120)||(4991016-4991097)
chr5 (46-131)||(36539669-36539754)
chr5 (49-117)||(7096203-7096271)
chr5 (39-131)||(9927501-9927593)
chr5 (46-128)||(32059654-32059735)
chr5 (40-105)||(5284762-5284827)
chr5 (40-125)||(29116998-29117083)
chr5 (39-128)||(32172569-32172658)
chr5 (62-119)||(38047929-38047986)
chr5 (40-131)||(912710-912802)
chr5 (56-120)||(9202821-9202885)
chr5 (40-140)||(42181145-42181245)
chr5 (57-134)||(34117595-34117669)
chr5 (45-120)||(37063147-37063222)
chr5 (40-102)||(12407752-12407813)
chr5 (49-131)||(18704098-18704179)
chr5 (39-105)||(20982223-20982289)
chr5 (38-116)||(38766920-38766998)
chr5 (47-120)||(6733966-6734038)
chr5 (39-100)||(26516214-26516275)
chr5 (63-128)||(36796771-36796836)
chr5 (39-131)||(39823183-39823276)
chr5 (56-128)||(10907312-10907384)
chr5 (39-114)||(11835192-11835268)
chr5 (85-125)||(32969185-32969225)
chr5 (40-108)||(35095868-35095936)
chr5 (47-131)||(35960338-35960421)
chr5 (59-106)||(1636844-1636891)
chr5 (39-106)||(6739788-6739855)
chr5 (85-120)||(8158374-8158409)
chr5 (68-131)||(9703302-9703365)
chr5 (85-124)||(10303763-10303802)
chr5 (85-128)||(14295468-14295511)
chr5 (47-114)||(17756808-17756875)
chr5 (85-128)||(35550911-35550953)
chr5 (85-120)||(39750105-39750140)
chr5 (88-130)||(583836-583878)
chr5 (86-131)||(3952061-3952104)
chr5 (45-95)||(38033890-38033940)
chr5 (56-114)||(40048359-40048417)
chr5 (62-131)||(4855637-4855706)
chr5 (86-131)||(10272493-10272538)
chr5 (46-99)||(10391276-10391329)
chr5 (67-108)||(11615452-11615493)
chr5 (47-100)||(13224353-13224406)
chr5 (56-113)||(14932223-14932280)
chr5 (90-131)||(34205206-34205247)
chr5 (62-127)||(39128578-39128643)
chr5 (85-125)||(12595808-12595848)
chr5 (56-100)||(17498668-17498712)
chr5 (47-131)||(19177403-19177487)
chr5 (56-108)||(21782654-21782706)
chr5 (48-120)||(28586839-28586911)
chr5 (39-120)||(40534110-40534193)
[»] chr3 (69 HSPs)
chr3 (48-131)||(37788786-37788868)
chr3 (46-119)||(38462204-38462277)
chr3 (63-125)||(1395611-1395673)
chr3 (47-117)||(16790432-16790502)
chr3 (65-131)||(29771751-29771817)
chr3 (46-120)||(33307653-33307727)
chr3 (41-125)||(36783402-36783488)
chr3 (47-129)||(43116492-43116574)
chr3 (40-117)||(3182438-3182515)
chr3 (40-120)||(20349549-20349629)
chr3 (45-117)||(44374720-44374792)
chr3 (46-114)||(49772747-49772815)
chr3 (64-131)||(48397587-48397654)
chr3 (41-131)||(22214743-22214833)
chr3 (41-131)||(28779274-28779364)
chr3 (85-131)||(32555043-32555089)
chr3 (56-117)||(3757981-3758042)
chr3 (59-120)||(4990630-4990691)
chr3 (56-128)||(20192671-20192743)
chr3 (47-127)||(32703062-32703142)
chr3 (68-127)||(37689450-37689509)
chr3 (46-113)||(39971242-39971309)
chr3 (65-131)||(24235745-24235811)
chr3 (56-106)||(24605103-24605153)
chr3 (62-116)||(48364956-48365010)
chr3 (39-100)||(16790181-16790242)
chr3 (39-120)||(22232742-22232823)
chr3 (39-119)||(24268228-24268309)
chr3 (85-118)||(25195386-25195419)
chr3 (47-120)||(27792796-27792869)
chr3 (55-120)||(53736186-53736251)
chr3 (47-120)||(54775052-54775125)
chr3 (87-131)||(2865721-2865765)
chr3 (56-100)||(8142803-8142847)
chr3 (68-120)||(10101549-10101601)
chr3 (68-120)||(10212474-10212526)
chr3 (39-127)||(21574408-21574495)
chr3 (56-131)||(23530246-23530322)
chr3 (59-127)||(30669036-30669104)
chr3 (48-120)||(36646455-36646527)
chr3 (45-105)||(41028939-41028999)
chr3 (47-118)||(32663566-32663636)
chr3 (60-106)||(36283659-36283703)
chr3 (40-126)||(25129748-25129833)
chr3 (85-119)||(26990696-26990730)
chr3 (45-131)||(36101490-36101576)
chr3 (67-125)||(49586984-49587042)
chr3 (47-117)||(53457301-53457371)
chr3 (60-113)||(2128331-2128384)
chr3 (90-131)||(3467450-3467491)
chr3 (39-80)||(9279439-9279480)
chr3 (48-128)||(25183053-25183134)
chr3 (85-130)||(26599140-26599185)
chr3 (40-117)||(28283653-28283730)
chr3 (64-113)||(33882969-33883018)
chr3 (62-131)||(40122815-40122883)
chr3 (44-105)||(41159030-41159091)
chr3 (56-105)||(49546575-49546624)
chr3 (39-100)||(49739483-49739544)
chr3 (56-117)||(52413197-52413258)
chr3 (48-120)||(905043-905115)
chr3 (51-127)||(8007761-8007837)
chr3 (68-120)||(10357378-10357430)
chr3 (68-120)||(15304420-15304472)
chr3 (88-128)||(23315591-23315631)
chr3 (40-100)||(25964359-25964419)
chr3 (39-79)||(28842971-28843011)
chr3 (56-104)||(42039092-42039140)
chr3 (64-120)||(42809242-42809298)
[»] chr6 (51 HSPs)
chr6 (39-120)||(3217263-3217344)
chr6 (39-106)||(32975894-32975961)
chr6 (56-130)||(24836262-24836336)
chr6 (46-127)||(29274295-29274376)
chr6 (69-128)||(2027471-2027530)
chr6 (39-128)||(22742282-22742371)
chr6 (48-131)||(10452422-10452505)
chr6 (40-107)||(28531627-28531694)
chr6 (86-130)||(27595630-27595674)
chr6 (56-131)||(4006647-4006722)
chr6 (40-131)||(11340687-11340777)
chr6 (39-125)||(2206506-2206592)
chr6 (69-127)||(7785808-7785866)
chr6 (46-120)||(8349737-8349811)
chr6 (46-128)||(10032494-10032576)
chr6 (45-130)||(2514624-2514709)
chr6 (39-128)||(3155092-3155181)
chr6 (39-108)||(4248874-4248943)
chr6 (47-120)||(5328898-5328971)
chr6 (40-128)||(10400186-10400274)
chr6 (39-120)||(10749301-10749381)
chr6 (40-117)||(31672544-31672621)
chr6 (39-120)||(33068634-33068715)
chr6 (41-97)||(5554861-5554917)
chr6 (48-120)||(7713950-7714022)
chr6 (56-120)||(20671938-20672002)
chr6 (47-127)||(21959652-21959732)
chr6 (88-120)||(27693512-27693544)
chr6 (85-128)||(281913-281956)
chr6 (45-120)||(7354126-7354201)
chr6 (85-120)||(27713469-27713504)
chr6 (67-106)||(27857319-27857358)
chr6 (57-120)||(32513759-32513821)
chr6 (85-127)||(1402958-1403000)
chr6 (85-131)||(2117365-2117411)
chr6 (39-117)||(6078365-6078443)
chr6 (62-128)||(9093621-9093687)
chr6 (62-120)||(24476541-24476599)
chr6 (46-119)||(28660160-28660234)
chr6 (74-120)||(28660833-28660879)
chr6 (57-131)||(34429752-34429826)
chr6 (46-118)||(1497903-1497976)
chr6 (91-120)||(2732312-2732341)
chr6 (47-120)||(4325381-4325454)
chr6 (45-106)||(8420284-8420345)
chr6 (86-131)||(11363430-11363475)
chr6 (66-106)||(2027891-2027931)
chr6 (52-120)||(2034512-2034579)
chr6 (62-114)||(9559620-9559672)
chr6 (52-116)||(29940725-29940789)
chr6 (56-96)||(33116538-33116578)
[»] scaffold0024 (2 HSPs)
scaffold0024 (39-131)||(27492-27584)
scaffold0024 (62-120)||(21351-21409)
[»] chr1 (64 HSPs)
chr1 (39-126)||(4200145-4200232)
chr1 (55-131)||(15360826-15360902)
chr1 (40-129)||(45990122-45990211)
chr1 (40-120)||(870962-871042)
chr1 (46-131)||(28467369-28467456)
chr1 (39-117)||(7274015-7274093)
chr1 (39-128)||(49516985-49517075)
chr1 (47-127)||(44032065-44032145)
chr1 (59-127)||(48830142-48830210)
chr1 (51-108)||(289168-289225)
chr1 (50-131)||(17269177-17269258)
chr1 (62-131)||(29007778-29007847)
chr1 (39-127)||(43372025-43372113)
chr1 (39-102)||(16982027-16982090)
chr1 (58-125)||(29793991-29794057)
chr1 (39-126)||(50998468-50998555)
chr1 (85-127)||(27738246-27738288)
chr1 (85-131)||(30371110-30371156)
chr1 (47-113)||(33339500-33339566)
chr1 (58-127)||(4256108-4256177)
chr1 (86-131)||(7218136-7218181)
chr1 (70-127)||(44936656-44936713)
chr1 (47-120)||(46980202-46980275)
chr1 (46-131)||(49557064-49557149)
chr1 (42-127)||(52286597-52286682)
chr1 (56-120)||(1232965-1233029)
chr1 (56-112)||(1730825-1730881)
chr1 (85-125)||(10439648-10439688)
chr1 (40-100)||(11218175-11218235)
chr1 (56-120)||(11560622-11560686)
chr1 (69-117)||(14737781-14737829)
chr1 (88-128)||(15361678-15361718)
chr1 (39-127)||(17420119-17420207)
chr1 (39-119)||(23895252-23895332)
chr1 (88-140)||(29723454-29723506)
chr1 (62-110)||(36641814-36641862)
chr1 (44-120)||(42336583-42336659)
chr1 (62-125)||(4215311-4215374)
chr1 (85-128)||(9656612-9656655)
chr1 (92-131)||(25006096-25006135)
chr1 (61-120)||(36151578-36151637)
chr1 (86-117)||(45234160-45234191)
chr1 (85-128)||(47877084-47877127)
chr1 (62-117)||(50319231-50319286)
chr1 (85-131)||(5421982-5422028)
chr1 (40-105)||(4202217-4202282)
chr1 (39-116)||(4304277-4304354)
chr1 (86-131)||(5592747-5592792)
chr1 (64-117)||(6933037-6933090)
chr1 (45-106)||(10854655-10854716)
chr1 (67-120)||(11211062-11211115)
chr1 (40-120)||(30815708-30815789)
chr1 (47-116)||(36602714-36602783)
chr1 (39-124)||(37818380-37818465)
chr1 (39-104)||(44940259-44940324)
chr1 (86-131)||(45205031-45205076)
chr1 (56-120)||(27140418-27140482)
chr1 (67-119)||(38867907-38867959)
chr1 (40-116)||(40357963-40358039)
chr1 (85-125)||(41516148-41516188)
chr1 (40-104)||(41638399-41638463)
chr1 (48-120)||(45107548-45107619)
chr1 (43-114)||(48282053-48282125)
chr1 (64-120)||(52559901-52559957)
[»] chr7 (72 HSPs)
chr7 (60-117)||(8680929-8680986)
chr7 (45-130)||(49060462-49060547)
chr7 (39-120)||(30133967-30134046)
chr7 (41-131)||(30496622-30496712)
chr7 (62-131)||(45813242-45813311)
chr7 (47-119)||(30751441-30751513)
chr7 (60-131)||(1417201-1417272)
chr7 (44-131)||(44241781-44241867)
chr7 (57-127)||(23918891-23918961)
chr7 (38-120)||(27121659-27121741)
chr7 (42-120)||(35536026-35536104)
chr7 (56-106)||(39505890-39505940)
chr7 (46-131)||(9527152-9527237)
chr7 (67-120)||(39591540-39591593)
chr7 (47-120)||(45593792-45593865)
chr7 (47-131)||(5010530-5010614)
chr7 (42-128)||(7453462-7453549)
chr7 (56-127)||(28165024-28165095)
chr7 (85-128)||(31002723-31002766)
chr7 (39-106)||(31341110-31341177)
chr7 (85-128)||(40689051-40689094)
chr7 (56-106)||(5939017-5939067)
chr7 (47-117)||(7244626-7244696)
chr7 (47-120)||(991994-992067)
chr7 (62-131)||(3501028-3501097)
chr7 (34-131)||(5373136-5373233)
chr7 (47-120)||(22759110-22759183)
chr7 (45-130)||(25511549-25511634)
chr7 (47-128)||(47004011-47004092)
chr7 (39-107)||(1431394-1431462)
chr7 (62-125)||(1432032-1432098)
chr7 (46-118)||(2223071-2223143)
chr7 (85-129)||(30456514-30456558)
chr7 (68-112)||(41875864-41875908)
chr7 (60-140)||(48157173-48157253)
chr7 (85-128)||(12835002-12835045)
chr7 (88-127)||(22296294-22296333)
chr7 (97-140)||(24895330-24895373)
chr7 (47-130)||(27481357-27481440)
chr7 (54-120)||(5272893-5272959)
chr7 (56-106)||(5276157-5276207)
chr7 (97-131)||(24909638-24909672)
chr7 (49-119)||(24973870-24973940)
chr7 (62-115)||(31149586-31149640)
chr7 (62-115)||(31167878-31167932)
chr7 (56-106)||(35808991-35809041)
chr7 (61-115)||(36532289-36532343)
chr7 (48-126)||(38496583-38496659)
chr7 (85-131)||(45777233-45777279)
chr7 (86-120)||(46825061-46825095)
chr7 (85-114)||(3635927-3635956)
chr7 (63-120)||(5006582-5006639)
chr7 (63-120)||(7623078-7623135)
chr7 (47-112)||(8445210-8445275)
chr7 (47-128)||(27548187-27548268)
chr7 (59-120)||(27626197-27626258)
chr7 (64-117)||(28178910-28178963)
chr7 (62-131)||(28613596-28613665)
chr7 (40-105)||(29574689-29574754)
chr7 (46-127)||(39551614-39551695)
chr7 (86-127)||(40428518-40428559)
chr7 (63-119)||(1373614-1373670)
chr7 (56-112)||(5269463-5269519)
chr7 (56-100)||(14823938-14823982)
chr7 (56-100)||(15270945-15270989)
chr7 (52-108)||(20476595-20476651)
chr7 (56-92)||(25507284-25507320)
chr7 (56-92)||(25558290-25558326)
chr7 (56-92)||(25558488-25558524)
chr7 (56-120)||(33894556-33894619)
chr7 (68-128)||(38010659-38010719)
chr7 (88-128)||(39908059-39908099)
[»] scaffold0590 (1 HSPs)
scaffold0590 (48-120)||(1147-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (48-120)||(2756-2828)
[»] scaffold0103 (1 HSPs)
scaffold0103 (63-127)||(51508-51572)
[»] scaffold0549 (2 HSPs)
scaffold0549 (40-131)||(1786-1876)
scaffold0549 (40-131)||(3876-3966)
[»] scaffold0015 (1 HSPs)
scaffold0015 (82-120)||(69016-69054)
[»] scaffold0085 (1 HSPs)
scaffold0085 (86-127)||(34063-34104)
[»] scaffold0508 (1 HSPs)
scaffold0508 (45-120)||(9848-9923)
[»] scaffold0349 (1 HSPs)
scaffold0349 (85-120)||(18440-18475)
[»] scaffold0287 (1 HSPs)
scaffold0287 (85-114)||(10129-10158)
[»] scaffold0221 (1 HSPs)
scaffold0221 (63-120)||(20235-20292)
[»] scaffold0153 (2 HSPs)
scaffold0153 (91-128)||(6563-6600)
scaffold0153 (91-128)||(13583-13620)
[»] scaffold0060 (1 HSPs)
scaffold0060 (47-112)||(63366-63431)


Alignment Details
Target: chr2 (Bit Score: 250; Significance: 1e-139; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 18 - 316
Target Start/End: Complemental strand, 3423943 - 3423647
Alignment:
Q  18 gtttggaccaacatcttaaaaataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423943 gtttggaccaacatcttaaaaataagtgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 3423844  T
Q  118 taacctataagttgcttacacaaattggttctcgtctaaatatatatacatactattgatnnnnnnnntattggtgctatgagtcgcccctaacacccgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||     
T  3423843 taacctataagttgcttacacaaattggttctcgtctaaatatatatacatactattgat--aaaaaatattggtgctatgagtcgccccaaacacccgc 3423746  T
Q  218 gcttagggtcatcaccgtttgtacccgtggattagatcaaataagactttaaaatacaaatgaaaagtatatgagcatacctttttgtcatctctgcta 316  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423745 gcttagggtcatcaccgtttgtaccggtagattagatcaaataagactttaaaatacaaatgaaaagtatatgagcatacctttttgtcatctctgcta 3423647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 15866821 - 15866733
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||||  |||||||||||| | || ||||||||||| |||||||    
T  15866821 taagtgcttatcatacaagtgtttgtgtataagttatttttgtaacaaaatgtaaaataaagtcgacttgttttcatataagctataag 15866733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 11513817 - 11513906
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| ||||||||| ||| ||||||||||||||||||     | |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  11513817 ataagcacttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttg 11513906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 44606242 - 44606164
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||||| ||| ||||||||||||||||| ||||||  || ||||||||||||||||| | |||| ||||||||    
T  44606242 ataagcgcttattatataagtgtttatgtataagctattttcataacaaaagataaaataaagaccaattgttttcata 44606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 9478221 - 9478302
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 126  Q
    |||||||||| ||||||||||||||||| ||||| | || ||  |||||||||||| ||||| ||||||||||||| |||||    
T  9478221 gcttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 35459834 - 35459907
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||| || |||||||| ||||| | ||||||||||||||||||||||||||| ||||| |||||    
T  35459834 ttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataa 35459907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 2416246 - 2416318
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||| ||||| |||| |||||| |||||||    
T  2416246 aagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataag 2416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 17952853 - 17952774
Alignment:
Q  41 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| ||||||||| ||| | |||| |||||| ||||| | || |||||||||||||||||||||| |||||||||||||    
T  17952853 aagcacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataa 17952774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 25609729 - 25609804
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||| ||||||||||| ||||| | ||  |||||||||||||||||||| |||||||| ||||| ||||||||||    
T  25609729 aagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttg 25609804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 3102617 - 3102695
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||| || || ||||||||||| ||||||| || ||||| |||||||||||||||| |||||| |||||| ||||    
T  3102617 ttatcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataatctat 3102695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 6926590 - 6926505
Alignment:
Q  44 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    ||||||||||| || ||||||||||||||| |||| |  |  |||||||||||||| |||||||| ||||||||||| |||||||||    
T  6926590 cgcttatcatataaatgtttatgtataagtcatttgtacaagaaaagataaaataa-gtcaaattgttttcatataaactataagtt 6926505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 10143105 - 10143179
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    ||||| ||||||||||||||||| | || ||||||||||||| |||||||| | |||| |||||| |||||||||    
T  10143105 aagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtt 10143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 28803654 - 28803568
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||| ||||| |||| ||||||||||||   || |||||||||||||||||||||| |  |||||||||| ||| ||||||    
T  28803654 gcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttg 28803568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 5045294 - 5045245
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  5045294 aagtgtttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 13630412 - 13630343
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||| | || |||||||||| ||||||||||| | ||||||||||| | ||||||||    
T  13630412 ttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttg 13630343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 29430672 - 29430760
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||| |||||||||||| ||||||||||||| ||||| | || |||||| | ||||||||||||| | ||||| ||||| |||||||    
T  29430672 ataagcgtttatcatacaagggtttatgtataagctatttctataacaaaag-ttaaataaagtcaaactgttttcttataagctataag 29430760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 42817530 - 42817449
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| |||||||| ||||||| || |||| ||||||| | |||||||||||||||| |||||||  | |||||||||||    
T  42817530 ataagcgtttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcatataa 42817449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 3458598 - 3458654
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| |||||||||||| || |||||||||||||||||||||| | |||||||||||    
T  3458598 atgtctaagttatttttataacaaaagataaaataaagtcaaacttttttcatataa 3458654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 3673734 - 3673814
Alignment:
Q  50 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    ||||| ||||| |||||||| |||||||| | || ||||| |||||||||||| ||||| |||||||||||  ||||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtt 3673814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 15173442 - 15173506
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 103  Q
    |||| |||||||| ||||||||| |||||||||||||||| | || |||||||| ||||||||||    
T  15173442 ataaacgcttatcgtacaagtgtctatgtataagttatttctataacaaaagatgaaataaagtc 15173506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 18962184 - 18962104
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||  ||||| |||||||| || ||||||| || |||||||||||||||||| ||| | ||||||||||| ||||||    
T  18962184 ttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 31740065 - 31740021
Alignment:
Q  87 aaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  31740065 aaagataaaataaagtcaaactattttcatataagctataagttg 31740021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 23143107 - 23143040
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |||| |||||    
T  23143107 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttg 23143040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 23554897 - 23554830
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |||| |||||    
T  23554897 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttg 23554830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 31461363 - 31461426
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatt 111  Q
    ||||||| ||||| |||| |||||| ||||| | || |||||||||||||||||||||||||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaattatt 31461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 32694130 - 32694220
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||| |||| || ||||||||| ||||| | || |||||||||||||||| ||| | |||||| ||||||  |||||||||    
T  32694130 taagcgcttatcatataagtatt-atgtataagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagttg 32694220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 16946981 - 16947039
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| ||||| ||||  ||||||| |||||||||||||||||||||| ||||    
T  16946981 ttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttcacataa 16947039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 17017646 - 17017704
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| ||||| ||||  ||||||| |||||||||||||||||||||| ||||    
T  17017646 ttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttcacataa 17017704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 34339845 - 34339903
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||| |||||| |||||  | |||||||||||||||||||||||||||||| |||||    
T  34339845 ttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataa 34339903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 39929804 - 39929874
Alignment:
Q  60 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||| ||||||||||| || || ||||||||||||| || ||||||| |||| |||||| |||||||||    
T  39929804 gtttatttataagttattgttataacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 43199356 - 43199422
Alignment:
Q  65 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||| |  | |||||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  43199356 tgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttg 43199422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 43808492 - 43808573
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttg-taccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||||| ||||||||||||||||| |||||||  || ||||  |||||||||||| ||| |||||||||||||    
T  43808492 ataagcgcgtatcatataagtgtttatgtataagctattttttataacaaac-ataaaataaagttaaactattttcatataa 43808573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 4026750 - 4026807
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    ||||| |||| |||||| ||||||| || |||||||||||||||||| ||||||||||    
T  4026750 aagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttt 4026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 10150672 - 10150749
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||| ||||| ||| ||||||||||||||||||||||| | ||  |||||||||||||| || ||||  ||||||||    
T  10150672 taagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcata 10150749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 35809852 - 35809927
Alignment:
Q  42 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 118  Q
    ||||||||||||| ||||| |||||||||||||||||   |  | |||||||||||||| ||||||| |||||||||    
T  35809852 agcgcttatcatataagtgcttatgtataagttatttccatgac-aaagataaaataaaatcaaattgttttcatat 35809927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 43173189 - 43173225
Alignment:
Q  90 gataaaataaagtcaaattattttcatataacctata 126  Q
    ||||||||||||||||||||||||||||||| |||||    
T  43173189 gataaaataaagtcaaattattttcatataagctata 43173225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 43431594 - 43431534
Alignment:
Q  43 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 103  Q
    |||||||||||| ||||||| |||||||||||||||   || ||||||||||| |||||||    
T  43431594 gcgcttatcatataagtgttaatgtataagttatttcaataacaaaagataaagtaaagtc 43431534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 1939458 - 1939407
Alignment:
Q  67 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 118  Q
    |||||||||||| | || |||||||||||||||||| ||| |||||||||||    
T  1939458 tataagttatttctataacaaaagataaaataaagtgaaactattttcatat 1939407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 11344421 - 11344350
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||| ||||| ||||| ||||| | || |||||||||||| ||||||||||| |||||||| || ||||||    
T  11344421 aagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataa 11344350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 35755639 - 35755564
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||| ||||| | ||   ||| | |||||||||||||||| ||||||| ||| ||||||||||    
T  35755639 aagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttg 35755564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 38239705 - 38239638
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||| || |||||  ||||||||||||||||| ||||| | || ||||||||||||| ||||||||    
T  38239705 ataagcactcatcatgtaagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 40837557 - 40837502
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    ||||||||| ||||| | || ||||||||||| |||||||||||| ||||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 6547826 - 6547912
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||| ||||| || ||||||||||  |||||||||||||| | || ||||||  |||| ||||||||| |||||| |||||| ||||    
T  6547826 ataaccgcttttcttacaagtgttcgtgtataagttatttctatagcaaaagtcaaaacaaagtcaaaatatttttatataagctat 6547912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 6993832 - 6993786
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||| |||||||||| ||||||||| ||||| ||||    
T  6993832 caaaagataaaataaggtcaaattatattcatataagctataggttg 6993786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 7825185 - 7825243
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 114  Q
    |||||||| |||||||| ||||||| || ||||||||||| |||||| ||||| |||||    
T  7825185 aagtgtttctgtataagctatttttataacaaaagataaagtaaagttaaatttttttc 7825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Complemental strand, 10646396 - 10646362
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||||||||||||||||| |||||    
T  10646396 aaaagataaaataaagtcaaattattttcctataa 10646362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 11863797 - 11863723
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||| ||| ||||| |||||||| ||||| ||||  | |||||||||||||| ||| ||||| |||||||||||    
T  11863797 cttattatataagtggttatgtatgagttagttttacagcaaaagataaaatagagttaaattgttttcatataa 11863723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 14209201 - 14209279
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||| |||||||| ||| |||| |||||   || |||||||||||||||| ||||| | ||||||||||| ||||    
T  14209201 ttatcatataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 33197393 - 33197327
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    |||| ||||||||||| ||||| |||| |||||| ||||| | || ||||||||| |||||||||||    
T  33197393 ataaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 33942112 - 33942158
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttg 33942158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 37053511 - 37053601
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    ||||| ||||||||| ||||| |||||||||   ||||| | || || || |||||||||||||||| | |||||||||||  ||||||||    
T  37053511 taagcacttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtt 37053601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 37292455 - 37292409
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||| ||| ||||||||||||| |||| |||||    
T  37292455 caaaagataaaataaagtaaaactattttcatataagctattagttg 37292409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 37766720 - 37766806
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||| ||||| |||||||| || ||||  | |  ||||| |||||||||||||||| | ||||| ||||| ||||||||||    
T  37766720 gcttatcatataagtgcttatgtattagctattcatatgacaaaaaataaaataaagtcaaaatgttttcgtataaactataagttg 37766806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 40672942 - 40672872
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||  |||| |||||||||||||||||| | |   ||||||||||||||||||| ||| ||||||||    
T  40672942 ttatcatttaagtttttatgtataagttatttctatgaaaaaagataaaataaagtcacattgttttcata 40672872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 1160846 - 1160809
Alignment:
Q  91 ataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  1160846 ataaaataaagtcaaactattttcatataagctataag 1160809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 3611159 - 3611216
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    ||||| ||||||||||||||||| | || |||||| ||||||||||| ||||| ||||    
T  3611159 aagtgcttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttt 3611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 4550700 - 4550785
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||| | ||||| ||||||||||||| |||   ||  |||||||||||||| |||||  | ||||||||||| ||||||||||    
T  4550700 cttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataagttg 4550785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 6988077 - 6988106
Alignment:
Q  85 caaaagataaaataaagtcaaattattttc 114  Q
    ||||||||||||||||||||||||||||||    
T  6988077 caaaagataaaataaagtcaaattattttc 6988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 7282951 - 7283012
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||||||||||||||| ||||||| ||  |||||| ||||| |||||||| | ||||||||    
T  7282951 aagtgtttatgtataagctatttttataagaaaagaaaaaatgaagtcaaactgttttcata 7283012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 13864577 - 13864630
Alignment:
Q  50 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 103  Q
    ||||| ||||||||||||||||| ||||| | || |||||| ||||||||||||    
T  13864577 tcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 15171183 - 15171244
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||||||||||||||||| ||| | || || |||||||| |||||||||| | ||||||||    
T  15171183 aagtgtttatgtataagttttttctataacagaagataaattaaagtcaaaatgttttcata 15171244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 28039462 - 28039397
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||| ||||| |||||| ||  || |||||||||||||||| |||| ||||||||||| |||||||    
T  28039462 tatgaataagctattttggttacacaagataaaataaagtccaattgttttcatataaactataag 28039397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 29503235 - 29503161
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 115  Q
    |||||| ||||| ||| ||||||||||||||| | ||||| | || |||  ||||||||||||||||| ||||||||    
T  29503235 ataagcacttattatagaagtgtttatgtatatgatatttctataacaa--gataaaataaagtcaaactattttca 29503161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 33944568 - 33944609
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||| |||||||||||||||||| ||||||||||| ||||||    
T  33944568 aaaatataaaataaagtcaaattgttttcatataagctataa 33944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 35252268 - 35252207
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 108  Q
    |||||||| || |||||||||||| ||||||  | ||  |||||||||||||||||||||||    
T  35252268 ttatcatataaatgtttatgtatatgttattcctttaataaaagataaaataaagtcaaatt 35252207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 39983282 - 39983350
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||| |||||| |||||||||| |||| | ||||||||| | |||| |||||||||||| ||||||||||    
T  39983282 ttatatataagctatttttgtaacaaagg-taaaataaaataaaataattttcatataagctataagttg 39983350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 41407246 - 41407291
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| ||||    
T  41407246 ataagctatttctgtaccaaaagataaaataaagttaaattgtttt 41407291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 5043666 - 5043622
Alignment:
Q  87 aaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||||| | ||||||||||| ||| ||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttg 5043622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 14666493 - 14666565
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 140  Q
    ||||||| ||||  || |||||||||||||||||||||| |  ||||||||||  ||||||||| || |||||    
T  14666493 ataagttgttttgataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaa 14666565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 22681310 - 22681250
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||| ||||||||  | |||||||||||| |||| |||||| ||||||||||| |||||||    
T  22681310 ataaattatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataag 22681250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 23747243 - 23747295
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 114  Q
    ||||||||||| ||||||| || ||||||||||||| || | |||||||||||    
T  23747243 ttatgtataagctatttttatatcaaaagataaaatgaatttaaattattttc 23747295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 28933765 - 28933817
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    ||||||||| ||||| | || ||||||||||||| || |||||||||||||||    
T  28933765 atgtataagctatttatataacaaaagataaaatcaaatcaaattattttcat 28933817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 44119723 - 44119763
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagt 102  Q
    ||||||||||||||||||| ||  |||||||||||||||||    
T  44119723 ttatgtataagttatttttatagtaaaagataaaataaagt 44119763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 44458483 - 44458415
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    ||||||| |||| |||||||||||| |||||||  | ||| ||||||| |||||||||  |||||||||    
T  44458483 tatcatataagtatttatgtataagctattttttcaacaacagataaactaaagtcaagctattttcat 44458415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 11917459 - 11917743
Alignment:
Q  18 gtttggaccaacatcttaaaaat-aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||      |||||||||| ||||||||||||||||||||||||||||||||    
T  11917459 gtttggaccaacatcttaaaaattaagcgcttatcatacaagtgtttatgt------tatttttgtaacaaaagataaaataaagtcaaattattttcat 11917552  T
Q  117 ataacctataagttgcttacacaaattggttctcgtctaaatatatatacatactattgatnnnnnnnntattggtgctatgagtcgcccctaacacccg 216  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |         |||||  ||||||| ||||||||| |||| |    
T  11917553 ataacctataagttgcttacaaaaattggttctcgtctaaatatttatacatactattaa---aaaaaatattgccgctatgattcgcccctaccacctg 11917649  T
Q  217 tgcttagggtcatcaccgtttgtacccgtggattagatcaaataagactttaaaatacaaatgaaaagtatatgagcatacctttttgtcatctc 311  Q
     |||||||||||||||  |||||||| || ||| |  ||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  11917650 cgcttagggtcatcactttttgtaccagtagataaattcaaataagcctttaaaacacaaatg-aaagtatatgagcctacctttttgtcatctc 11917743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 49219059 - 49219147
Alignment:
Q  43 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||  |||| ||| ||||||||||||| | || ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  49219059 gcgcttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttg 49219147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 4071811 - 4071890
Alignment:
Q  51 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||| |||||||||| ||||| | |||| | || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  4071811 catataagtgtttatatataact-atttctataacaaaagataaaataaagtcaaattattttcatataagctataagttg 4071890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 28582062 - 28581988
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 115  Q
    ||||| ||||||||| ||||||||||||||||  ||||||| || |||||||||||||||||||||| ||||||||    
T  28582062 taagcacttatcatagaagtgtttatgtataaactattttt-tagcaaaagataaaataaagtcaaactattttca 28581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 42322016 - 42321941
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| ||||| ||||||| || |||| ||||||||||||||||||| |||||||||||  |||||||||    
T  42322016 aagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttg 42321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 30024618 - 30024704
Alignment:
Q  41 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||| |||||||| ||||  ||||| ||||||||||| | || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  30024618 aagcgtttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 19422335 - 19422420
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    ||||||||||||||| || || ||||||||||||||||| | || ||||||||| ||||||||||||   ||||||||||| ||||    
T  19422335 taagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataaactat 19422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 55599082 - 55599149
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||| ||||| | |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  55599082 ataagcgcgtatcacataagtgtttatatataagttacttttgtaacaaaagacaaaataaagtcaaa 55599149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 8422982 - 8422892
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 140  Q
    ||||||| | ||| ||||||||||| ||||||| ||  ||||||||||||||||||  ||| ||||||||||| |||||||||| || |||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtc--attgttttcatataagctataagttgttttcacaa 8422892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 24193501 - 24193593
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||| ||||||||||| ||||  |||||||||||||||||||  | ||||| |||||| | ||| ||| |||||||||||||  |||||||||    
T  24193501 ataaacgcttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagttaaactattttcatataagttataagttg 24193593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 8130107 - 8130178
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||| ||| |||| |||| ||| | || |||||||||| ||||||||||||||||||||||||| ||||||    
T  8130107 aagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcatataagctataa 8130178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 13949949 - 13949906
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttg 13949906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 26883910 - 26884001
Alignment:
Q  39 ataagcgcttatcat-acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 129  Q
    ||||||||||||| | | ||||| ||||||||||||||||| | ||  || ||||||||| |||| ||||| ||||||||||| ||||||||    
T  26883910 ataagcgcttatcttgataagtgattatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagt 26884001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 30207723 - 30207633
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||| ||||||||| ||||| ||||||||| |||| || | || ||||| |||||||||| ||||| | ||||||||||| ||||||||||    
T  30207723 taagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttg 30207633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 35743223 - 35743298
Alignment:
Q  42 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||||||||||| | ||||| ||||| ||||||||| | || ||||||||||||||||| |||| || |||||||    
T  35743223 agcgcttatcatatatgtgttgatgtacaagttatttctataacaaaagataaaataaaggcaaactactttcata 35743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 44119295 - 44119228
Alignment:
Q  60 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||||||||||| | || |||||||||||| ||||||||  | ||||||||||| ||||||    
T  44119295 gtttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctataa 44119228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 52735068 - 52735119
Alignment:
Q  69 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| ||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  52735068 taagctatttctgtaacaaaagataaaataaagtcaaattactttcatataa 52735119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 3549683 - 3549590
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgctt 134  Q
    |||||| |||| ||| ||||| | ||| ||||||| | ||| || ||||||||||||| || |||||| ||||||||||||||||| ||||||||    
T  3549683 taagcgtttattatataagtgctaatgcataagtt-tctttataacaaaagataaaatcaaatcaaatgattttcatataacctatgagttgctt 3549590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 41606110 - 41606196
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgct 133  Q
    |||||||||||||||||||||| ||  ||||||  || |||| ||||||||||||||||||  || | |||||| ||||||| ||||    
T  41606110 ttatcatacaagtgtttatgtaaaaactattttgataacaaaggataaaataaagtcaaatggttcttatataagctataagctgct 41606196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 51044596 - 51044546
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||||||||||||| ||||| | || ||||||||||||||||||||||    
T  51044596 aagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaa 51044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 54325184 - 54325102
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||| ||||| || |||||||  ||||| | |  |||||||||||||||||||||| | ||||||||||| |||||||    
T  54325184 cttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataag 54325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 4191657 - 4191734
Alignment:
Q  41 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagat-aaaataaagtcaaattattttcata 117  Q
    ||||| |||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||| | ||||||||    
T  4191657 aagcgtttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 10192235 - 10192292
Alignment:
Q  74 tatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||| || ||||||||| |||||||||||||| |||||||||||  |||||||||    
T  10192235 tatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttg 10192292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 22684666 - 22684589
Alignment:
Q  43 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||| || || || |||||||| ||||| | || |||| | ||||||||||||||||| |||||||||||    
T  22684666 gcgcttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataa 22684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 27623579 - 27623640
Alignment:
Q  67 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||| ||||| | || |||||||||||||||||||||| |||||| |||||| |||||||    
T  27623579 tataagatatttgtataacaaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 36734817 - 36734890
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||| ||||||||||  | ||| | || |||||| ||||||||||||||| |||||||||||||    
T  36734817 ttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 40865746 - 40865806
Alignment:
Q  59 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||  ||||||| || ||||||||| |||||||||||| |||||||||||||    
T  40865746 tgtttatgtataaactatttttctaacaaaagatagaataaagtcaaa-tattttcatataa 40865806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 47970245 - 47970310
Alignment:
Q  50 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 115  Q
    ||||| ||||| ||||||||||| ||||| | || ||||||||||||| |||||||| ||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 51556013 - 51555956
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 104  Q
    |||||||| ||||| ||||||||||| |||| || || ||||||||||||||||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 485997 - 486073
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat-aaagtcaaattattttc 114  Q
    |||||||||||||||| ||||| ||||||||| | ||||| |  | ||||||||||||| ||||||||||| |||||    
T  485997 ataagcgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaataaaagtcaaattgttttc 486073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 3249868 - 3249800
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 107  Q
    |||||||||||||||| |||||| ||||| |||||||||| | |   ||||||| ||||||||||||||    
T  3249868 ataagcgcttatcatataagtgtgtatgtgtaagttatttctatgataaaagatgaaataaagtcaaat 3249800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 24443954 - 24444046
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| ||||||||| ||||  |||||||||||  |||| |  | ||||| |||||||||| |||||  |||||||||||| ||||||||||    
T  24443954 ataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 24444046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 32920543 - 32920462
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||| ||||||||||| ||||| ||||||| || |||  ||||||||||||||||||  |||| ||| || ||||||||||    
T  32920543 tatcatataagtgtttatggataagctatttttataacaa--gataaaataaagtcaaatcgttttaatagaagctataagttg 32920462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 45128464 - 45128376
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||| ||||||||| |||   ||||||||||  ||||| | || ||||||||||||| || |||||||||| |||||||| ||||||    
T  45128464 ataagcccttatcatataagaacttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataa 45128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 7022595 - 7022662
Alignment:
Q  50 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||| ||||| |||  |||||| ||||||| ||  ||||||||||||| ||||||||||||||||||    
T  7022595 tcatataagtgcttaattataagctatttttataagaaaagataaaatagagtcaaattattttcata 7022662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 18630642 - 18630697
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 140  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||| || |||||    
T  18630642 caaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaa 18630697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 78
Target Start/End: Original strand, 23819014 - 23819045
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttattt 78  Q
    ||||||||||||||||||||||||||||||||    
T  23819014 ttatcatacaagtgtttatgtataagttattt 23819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 24160644 - 24160557
Alignment:
Q  44 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| ||||| ||||  ||||| | ||| | || |||||||||| ||||| ||||| ||||||||| ||| ||||||||||    
T  24160644 cgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctataagttg 24160557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 32724081 - 32724116
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||||||| |||||||||||||    
T  32724081 caaaagataaaataaagtcaaactattttcatataa 32724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 44007983 - 44007940
Alignment:
Q  82 taccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||    
T  44007983 taccaaaagataaaataaagacaaattgttttcatataagctat 44007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 46859892 - 46859935
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||||||||||| ||||||||| || |||||||    
T  46859892 caaaagataaaataaagtcaaatcattttcatacaatctataag 46859935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 6364088 - 6364154
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||| | |||| |||| |||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataag 6364154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 15511483 - 15511425
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaa-aagataaaataaagt 102  Q
    |||||||||  ||||| ||||||||||||||||||| || ||| |||||||||||||||    
T  15511483 gcttatcatgtaagtgcttatgtataagttatttttataacaagaagataaaataaagt 15511425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 15969820 - 15969886
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgt-accaaaagataaaataaagtcaa 105  Q
    |||||| ||||  |||||||||||||||||||||||||||| | | | ||||||||| |||||||||    
T  15969820 taagcgtttatagtacaagtgtttatgtataagttatttttataaacgaaagataaagtaaagtcaa 15969886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 19040247 - 19040181
Alignment:
Q  61 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||| ||||| | ||  ||||||||||||||||||||| || ||||||| || ||||||    
T  19040247 tttatgtataagctatttctttagaaaaagataaaataaagtcaaaataatttcataaaagctataa 19040181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 27321984 - 27321946
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttattt 78  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  27321984 taagggcttatcatataagtgtttatgtataagttattt 27321946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 46013437 - 46013363
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  46013437 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 46247151 - 46247225
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  46247151 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataaattataagtt 46247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 47119073 - 47119027
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||| ||||| ||||| ||||||||||| ||||||||||    
T  47119073 caaaagataaaacaaagttaaattgttttcatataagctataagttg 47119027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 53192454 - 53192416
Alignment:
Q  92 taaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||||||||||||||||||||||| || |||||||||    
T  53192454 taaaataaagtcaaattattttcatagaatctataagtt 53192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 54414865 - 54414949
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataag---ttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||| ||||| |||||||||||   |||||||| ||   ||||| |||||||||||||  ||||||| |||||    
T  54414865 ataagcgcttatcatataagtgcttatgtataagctattatttttataaagaaagagaaaataaagtcaatctattttcctataa 54414949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 125
Target Start/End: Complemental strand, 55437388 - 55437354
Alignment:
Q  91 ataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||||||||||||||||||||||||| ||||    
T  55437388 ataaaataaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 24091434 - 24091467
Alignment:
Q  94 aaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||||||||||||||||||| ||||||    
T  24091434 aaataaagtcaaattattttcatataagctataa 24091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 24160929 - 24160998
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| ||||| | || |||| |||||||| |||| ||||||||||||| ||  ||||||||||    
T  24160929 ttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttg 24160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 24929416 - 24929501
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||| || ||||| ||||| |  ||||| | || ||||||||||||||||||| || | |||||||| || ||||||||||    
T  24929416 cttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttg 24929501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 25434567 - 25434522
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||||||  | ||||||||||| ||||||||||    
T  25434567 aaaagataaaataaagtcaatatgttttcatataagctataagttg 25434522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 49803151 - 49803208
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||| | || ||||||||||||| |||| ||||| |||||| ||||    
T  49803151 tatgtataagttatttctatagcaaaagataaaatgaagttaaattgttttcacataa 49803208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 50745939 - 50746008
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| |||| ||||||| || |||||||||||||||| ||||| | |||| |||||| ||| ||||||    
T  50745939 ttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttg 50746008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 53626717 - 53626781
Alignment:
Q  66 gtataagttatttttgtac--caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||| ||   |||||||||||||||| ||||| | ||||||||||| |||||||    
T  53626717 gtataagttatttttctataacaaaagataaaataaattcaaaatgttttcatataagctataag 53626781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 20936110 - 20936070
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||||||||||||||||| ||||||||| ||| ||||    
T  20936110 caaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 21193937 - 21193981
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||||||| ||||||| ||  |||||||||||||||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaataaagtcaaa 21193981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 21952930 - 21952966
Alignment:
Q  92 taaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  21952930 taaaataaagtcaaattgttttcatataagctataag 21952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 27968072 - 27968120
Alignment:
Q  58 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||| || ||||||||||| || |||| |||||||||||||||||    
T  27968072 gtgtttatataaaagttatttttataacaaatgataaaataaagtcaaa 27968120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 29194524 - 29194476
Alignment:
Q  72 gttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||  |||||||||||||||| ||||| |||||||||||||    
T  29194524 gttattttcgtgacaaaagataaaataaaatcaaactattttcatataa 29194476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 43372111 - 43372035
Alignment:
Q  51 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||| |||||||||   ||||| ||||||| || |||||||||||||| ||||||| | |||| |||||| ||||||    
T  43372111 catataagtgtttaaacataaggtatttttataacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 55870459 - 55870403
Alignment:
Q  75 atttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| || |||||||| ||||||||||||| | |||||| |||| ||||||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttg 55870403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 41620437 - 41620365
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  41620437 ttatcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatata 41620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 38561645 - 38561734
Alignment:
Q  42 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||| ||| |||||| ||| |||||||||||| | || |||||||||||||||||||||| |||||| || ||  ||||||||||    
T  38561645 agcgcttattatataagtgtctatatataagttatttatataacaaaagataaaataaagtcaaactatttttatctatactataagttg 38561734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 4558731 - 4558803
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||||| ||||| | ||  ||||||||||||||||| ||||||||||||||||  |||||||    
T  4558731 aagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataag 4558803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 31884510 - 31884598
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||||||||||||||  |||||||||||||||| | || ||||| ||||||| || |  |||| ||||||||||| ||||||    
T  31884510 ataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataa 31884598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 38874570 - 38874643
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||| || ||||||||||||||||||| ||| |||| | |||||||||||  ||||||||| |||||||||||    
T  38874570 ttatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataa 38874643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 40728566 - 40728505
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||||| ||||||| ||| ||||||||||| | || ||||||||||||||||||||||    
T  40728566 gcttatcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaaa 40728505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 1470985 - 1470921
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||| ||||| | ||  |||||||||||||||||||||||| |||||||||| |||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataag 1470921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 11494075 - 11494155
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||||| ||||| || |||||| ||||||||  || |||||||||| ||||||||||| | ||||||||||| ||||    
T  11494075 gcttatcatataagtgcttttgtatatgttattttcataacaaaagataacataaagtcaaacttttttcatataaactat 11494155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 14482124 - 14482192
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    |||||||||| ||||| ||||||||||  ||||| | || |||||||||||||||||||||||| ||||    
T  14482124 gcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 34788581 - 34788493
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||||||| || || ||| ||||||| ||||||| |  | |||||||||||||||||||| | ||| ||||||| ||||||    
T  34788581 ataagcgcttatcatataaatgcttacgtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 40357821 - 40357893
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||| |||| |||||||||||| | ||  | || |||||||||||||||||| ||||||||||||||    
T  40357821 gcttatcatataagtatttatgtataagctcttgatataacaaaagataaaataaagtaaaattattttcata 40357893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 29056139 - 29056064
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| ||| ||||||||||||||||||| || || |  | ||||||||||||||||||||| || |||||||||||    
T  29056139 gcttgtcaaacaagtgtttatgtataagctacttctagagcaaaagataaaataaagtcaatttgttttcatataa 29056064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 40280356 - 40280281
Alignment:
Q  42 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||||||||||| |||||  ||| |||||||||||| |  | |||||||||||||||||| ||||| ||||||||    
T  40280356 agcgcttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcata 40280281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 26820142 - 26820204
Alignment:
Q  66 gtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||| | || |||||||||||||||||||||| ||||||  ||||| |||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataag 26820204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 34770854 - 34770900
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  34770854 caaaagataaaataaagtcaaattgttttcatttaagctataagttg 34770900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 2364619 - 2364558
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 108  Q
    |||||||| || | |||||||||| | ||||||| || ||||||||||||||||||||||||    
T  2364619 ttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaagtcaaatt 2364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 7026655 - 7026728
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||| ||||| ||||| || | || || |||||||||||||||||| ||||| |||||||||||    
T  7026655 ttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataa 7026728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 35298624 - 35298539
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc-atataacctataagttg 131  Q
    |||||||| ||||| ||||||||||| |||||  ||| ||||||||||||||||| ||||   ||||| |||||| ||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttg 35298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 41336799 - 41336718
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| |||||| | || || |||||||||| | |||||| |  |||||||||||||| ||||||||| |||||||||||    
T  41336799 ataagcgtttatcaaataaatgcttatgtataaatcatttttatgacaaaagataaaatatagtcaaattgttttcatataa 41336718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 42597340 - 42597409
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||| |||||||  || ||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttg 42597409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 2699223 - 2699303
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| ||||||| | |||| ||| |||||||||||| |  | ||||| |||||||||||| ||| |||||||||||||    
T  2699223 taagcgcctatcatatacgtgtctatatataagttatttctacaacaaaatataaaataaagttaaactattttcatataa 2699303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 11056821 - 11056729
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| ||||||||| ||||||| ||| || || ||||| | || ||||||  ||||||||||  || ||||||||||||| ||||||||||    
T  11056821 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataagttg 11056729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 12225030 - 12224974
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 118  Q
    ||||||||||||||||| |    |||||||||||||||||||||| |||||||||||    
T  12225030 ttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttcatat 12224974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 29262979 - 29262947
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||||||||||||||||||    
T  29262979 aagataaaataaagtcaaattattttcatataa 29262947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 35869753 - 35869845
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| ||||||||| ||||  |||||||||||  |||| |  | ||||| |||||||||| |||||  |||||||||||| ||||||||||    
T  35869753 ataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 35869845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 2100767 - 2100802
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||||||| |||||||||||||    
T  2100767 caaaagataaaataaagtcaaaatattttcatataa 2100802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 29699178 - 29699237
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||| || || ||||||| ||||||||| | || ||||||||||||||||||||||    
T  29699178 ttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaa 29699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 29973014 - 29973089
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||| |||| |||||| ||||| | || || ||| ||||||||||||||| |||||||| |||| ||||||||||    
T  29973014 aagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttg 29973089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 39392815 - 39392748
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||| |||||||||| |||||  |||||||||  ||||| | || ||||||||||||||||||||||    
T  39392815 ataagtgcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaaa 39392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 42237539 - 42237488
Alignment:
Q  76 tttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  42237539 tttttataacaaaagataaaataaagttaaattgttttcatataagctataa 42237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 3537139 - 3537093
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||||||||| ||||| ||||| ||||| ||||    
T  3537139 caaaagataaaataaagtcaaattgttttcgtataagctataggttg 3537093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 3945207 - 3945281
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||||||| ||||||||||||   || |||||||||||||||| | ||  |||||| |||||| |||||||||    
T  3945207 aagtgtttatatataagttatttcaataacaaaagataaaataaaatgaagctatttttatataagctataagtt 3945281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 12361131 - 12361197
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||| |||||||||||| | ||   ||||||||||| |||||||||| ||||||||||| |||||||    
T  12361131 ttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataag 12361197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 14949812 - 14949882
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||||||  ||||||||||| || || | || |||||||||||||| ||||||| | ||||||||    
T  14949812 ttatcatacaagttcttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcata 14949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 26215435 - 26215493
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||| ||||||| |||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Complemental strand, 27728128 - 27728094
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||||||||| |||||||||||||    
T  27728128 aaaagataaaataaagtcaaactattttcatataa 27728094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 31315598 - 31315533
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    |||||||| |||||||  |||||||| ||||||| ||  ||||||||||||||||||||| ||||||    
T  31315598 ttatcata-aagtgttagtgtataagctatttttataataaaagataaaataaagtcaaactatttt 31315533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 34563174 - 34563244
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||| ||||| |||| |||||||||||| | |  |||| |||||||||||||||||  |||||||||    
T  34563174 ttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaaacaattttcata 34563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 1112785 - 1112858
Alignment:
Q  55 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||| ||||||||| | ||||| | || ||||||||||||||| || ||||| |||||| |||| |||||||    
T  1112785 caagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataag 1112858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 28769493 - 28769404
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||| |||||||||| || || ||||||||||| ||||  | || ||||  ||||||| |||||||| ||||||| ||||| |||||||    
T  28769493 ataagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataag 28769404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 31705025 - 31705090
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaatta-ttttcatataacctataag 128  Q
    ||||||||| ||||| ||||| |||||||||||| | |||||||||  |||||||||| |||||||    
T  31705025 atgtataagctatttctgtactaaaagataaaatcatgtcaaattacgtttcatataagctataag 31705090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 33209366 - 33209285
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||| |||  ||||| ||||| | ||   ||||||||||||||||| || | ||||||||||| |||||||    
T  33209366 ttatcatacaagtgtctataaataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataag 33209285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 787252 - 787172
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||  ||||| |||||| |||| | |||  ||| || ||||||||||||||||||||| || |||||||| ||||||    
T  787252 ttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataa 787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 4510945 - 4511025
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||| ||| || |||| |||||| ||||||   | |||||||| ||| ||||||||||| || ||||||||    
T  4510945 taagcgcttatcatgcaattgcttatttataagctattttgtaaacaaaagattaaaaaaagtcaaatttttctcatataa 4511025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 7878587 - 7878551
Alignment:
Q  92 taaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  7878587 taaaataaagtcaaattgttttcatataagctataag 7878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 10062262 - 10062218
Alignment:
Q  58 gtgtttatgtataagttatttttgtaccaaaagataaaataaagt 102  Q
    ||||||||||||||||||||| | |||||||||| || |||||||    
T  10062262 gtgtttatgtataagttatttctataccaaaagaaaagataaagt 10062218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 10939325 - 10939385
Alignment:
Q  41 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaag 101  Q
    |||| ||||| |||| | |||||||||||||||||||| | |  |||||||||||||||||    
T  10939325 aagcacttattatactactgtttatgtataagttatttctattacaaaagataaaataaag 10939385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 11376670 - 11376714
Alignment:
Q  90 gataaaataaagtcaaattattttcatataacctataagttgctt 134  Q
    |||||||||||||| ||||||||| |||||| ||||||| |||||    
T  11376670 gataaaataaagtctaattattttgatataagctataagatgctt 11376714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 35374479 - 35374439
Alignment:
Q  87 aaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  35374479 aaagataaaataaagttaaattgttttcatataagctataa 35374439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 35135816 - 35135725
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    ||||| ||||| |||| ||||||||||||||||| ||||| | || |||||||||||||||||||||| ||||||||||||| |||||||||    
T  35135816 ataagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 4991097 - 4991016
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| |||||||| |||||||| |||||||| ||||||| || |||||||||| ||||  |||| ||||||||||||||    
T  4991097 ataagcgattatcatataagtgtttgtgtataagctatttttataacaaaagataacataagatcaatttattttcatataa 4991016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 36539669 - 36539754
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||| ||||| |||||| |||| ||||| | || |||||||||||||||||||||  | ||||||||||| ||||||||||    
T  36539669 cttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttg 36539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 7096271 - 7096203
Alignment:
Q  49 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||||| ||||||||||| ||||| | || ||||||||||||||||||||||  |||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 9927501 - 9927593
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| |||||||   ||||||||||||||||||||||| | ||  |||||||||||| | |||||||| ||||||||||| | ||||||||    
T  9927501 ataagcacttatcaagtaagtgtttatgtataagttatttgtatagtaaaagataaaattacgtcaaattgttttcatataagcgataagttg 9927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 32059735 - 32059654
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||| ||||| ||||||||||| | |||||||| | || ||||||||||||||||| | ||||||||||| |||||||    
T  32059735 cttatcatataagtgcttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataag 32059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 5284827 - 5284762
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    |||||||||||  | || ||||||||||||| | |||||||||| |||||||||||||||||||||    
T  5284827 taagcgcttattgtgcacgtgtttatgtatatgctatttttgtaacaaaagataaaataaagtcaa 5284762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 29117083 - 29116998
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    ||||||||||||||| |  || ||||||||| ||||||| | || |||||||||||||||||||||| | ||||| ||||| ||||    
T  29117083 taagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 32172569 - 32172658
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||||||| | ||||||||||  ||||| |  | ||||||||||||| ||||||| || ||| ||||||| |||||||    
T  32172569 ataagcgcttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataag 32172658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 38047986 - 38047929
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    ||||||||||| ||| | | || |||||||||||||||||||||||||||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatata 38047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 912802 - 912710
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc-aaattattttcatataacctataagttg 131  Q
    |||| |||||||||| ||| ||||||| ||||||||||| | || || || ||||||||||||| ||||| ||||||||||| | ||||||||    
T  912802 taagtgcttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttg 912710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 9202885 - 9202821
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||| |||| |||||| ||||| |||| |||||||||||||||||| ||||| |||||||||||    
T  9202885 aagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataa 9202821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 42181245 - 42181145
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacaca 139  Q
    ||||||||||||| | ||||  | |||| | || ||||||| || |||||||||||| ||||||||||  ||||||||||| |||||||||| || ||||    
T  42181245 taagcgcttatcacataagtaataatgtgtcagctatttttataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcaca 42181146  T
Q  140 a 140  Q
    |    
T  42181145 a 42181145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 34117669 - 34117595
Alignment:
Q  57 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgctt 134  Q
    |||| ||||||||||||||||| | || ||||||||||||||| ||   ||||||| ||||||| |||||||||||||    
T  34117669 agtgcttatgtataagttatttctttaacaaaagataaaataaggt---attatttacatataagctataagttgctt 34117595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 37063222 - 37063147
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| ||||| || || ||||||||||  ||||| | || |||||||||||||||||||||| |||||||||||||    
T  37063222 gcttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataa 37063147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 12407813 - 12407752
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagt 102  Q
    ||||| ||||||||||||||||| ||||||||| ||||| | || ||||||||||||||||||    
T  12407813 taagctcttatcatacaagtgtt-atgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 18704179 - 18704098
Alignment:
Q  49 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| ||||  ||||||||||||||||| | || |||||||| ||||||||||||  |||||| |||||| ||||||||||    
T  18704179 atcatataagttcttatgtataagttatttctataacaaaagat-aaataaagtcaagctatttttatataagctataagttg 18704098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 20982289 - 20982223
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    ||||| |||||||||| ||||| ||||||||||| ||||| | || |||| ||||||||||||||||    
T  20982289 ataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 38766998 - 38766920
Alignment:
Q  38 aataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    ||||||||||||| ||| ||||||| ||| || |||||||| | || |||||| ||||||||||| ||| |||||||||    
T  38766998 aataagcgcttatgatataagtgttaatggatgagttatttctataacaaaagctaaaataaagttaaactattttcat 38766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 6734038 - 6733966
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||||||||| ||||  ||||||| || | |||||||||||||||| ||||| |||||||||||    
T  6734038 ttatcatataagtgtttatgcataatctatttttataacgaaagataaaataaagt-aaattgttttcatataa 6733966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 26516214 - 26516275
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    |||||||||||||||| ||||| ||||||||||| ||||| |  | ||||||||||||||||    
T  26516214 ataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 36796836 - 36796771
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||| || | ||||| ||||||||| || |||||||||||| |||| |||||||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataag 36796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 39823276 - 39823183
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||| | ||| ||| | |||||||| || |||||| | || |||||||||||||||||||||| || |||||||||| ||| ||||||    
T  39823276 ataagcgcttgttatagaagggcttatgtatcagattatttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttg 39823183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 10907312 - 10907384
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||||||||||| | || | || | ||||||||| ||||| || |||||||||| |||||||    
T  10907312 aagtgtttatgtataagttatttctatagctaatggtaaaataaaatcaaactactttcatataatctataag 10907384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 11835192 - 11835268
Alignment:
Q  39 ataagcgcttatcat-acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 114  Q
    |||| |||||||||| | ||||||||||||||||   |||||| || |||||||||||||||||| ||||| |||||    
T  11835192 ataaacgcttatcatgataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattgttttc 11835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 32969225 - 32969185
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctat 125  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  32969225 caaaagataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 35095936 - 35095868
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 108  Q
    ||||||||||||||| ||||| |||| | |||  ||||| | || ||||||||||||||||||||||||    
T  35095936 taagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaatt 35095868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 35960338 - 35960421
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||| |||| |||||| ||||  ||||| | ||  ||||||||||||||||||||| || |||||||||| ||||||||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaataaagtcaaacta-tttcatataaactataagttg 35960421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 1636891 - 1636844
Alignment:
Q  59 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||| ||||||||||| |||| || |||||||||||||||||||    
T  1636891 tgtttatgaataagttatttctgtatcacaagataaaataaagtcaaa 1636844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 6739788 - 6739855
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||| |||||||| ||| |||||||||||||| |||| | ||   ||||||||||||||||||||    
T  6739788 ataagcgtttatcatataagcgtttatgtataagtcatttctataaataaagataaaataaagtcaaa 6739855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Complemental strand, 8158409 - 8158374
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||| |||||||||||||||||    
T  8158409 caaaagataaaataaagttaaattattttcatataa 8158374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 9703365 - 9703302
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| |||| ||| |||||||||||||||||| |  |||||||||| ||| ||||||    
T  9703365 ataagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttg 9703302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 10303763 - 10303802
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataaccta 124  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  10303763 caaaagataaaataaagtcaaattgttttcatttaaccta 10303802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 14295468 - 14295511
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||||||||| | ||||||||||| |||||||    
T  14295468 caaaagataaaataaagtcaaactgttttcatataagctataag 14295511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 17756875 - 17756808
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 114  Q
    |||||||| ||||| |||||||| |||| ||| | || || ||||||||||||||||||||| |||||    
T  17756875 ttatcatataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaattgttttc 17756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 35550911 - 35550953
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  35550911 caaaagataaaataaagtc-aattattttcatataaactataag 35550953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 39750105 - 39750140
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||||||| |||||||||||||    
T  39750105 caaaagataaaataaagtcaaactattttcatataa 39750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 583878 - 583836
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 3952061 - 3952104
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  3952061 aaaagataaaataaagacaaatt--tttcatataacctataagttg 3952104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 38033890 - 38033940
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaa 95  Q
    |||||||| | ||||||||||||||||||||||| | || |||||||||||    
T  38033890 gcttatcaaataagtgtttatgtataagttatttatataacaaaagataaa 38033940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 40048417 - 40048359
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 114  Q
    ||||| ||||||||||||| ||| | || |||||||||||||||||| | |||||||||    
T  40048417 aagtgcttatgtataagttgtttctataacaaaagataaaataaagttatattattttc 40048359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 4855637 - 4855706
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||| || ||||||| || ||||| |||||||||||| ||||| || ||||||||  |||||||||    
T  4855637 ttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttg 4855706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 10272538 - 10272493
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||| |||||||||| ||||| ||||| ||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttg 10272493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 10391276 - 10391329
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataa 99  Q
    ||||||||| ||||| ||| ||||||| ||||||| || |||||||||||||||    
T  10391276 cttatcatataagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 11615452 - 11615493
Alignment:
Q  67 tataagttatttttgtaccaaaagataaaataaagtcaaatt 108  Q
    |||||| ||||||| || ||||||||||||||||||||||||    
T  11615452 tataagctatttttataacaaaagataaaataaagtcaaatt 11615493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 13224353 - 13224406
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    |||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||    
T  13224353 ttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 14932223 - 14932280
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    ||||||| ||||||||  ||||||| || |||||||||||||||||| ||||| ||||    
T  14932223 aagtgttcatgtataatctatttttatagcaaaagataaaataaagttaaattgtttt 14932280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 34205206 - 34205247
Alignment:
Q  90 gataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| ||||||||||||||||| |||||| ||||||||||    
T  34205206 gataaagtaaagtcaaattatttttatataagctataagttg 34205247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 39128578 - 39128643
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||| || || | || |||||||||||||||||||||||| || ||| |||| ||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagtcaaattgttctcaaataaactataa 39128643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 12595848 - 12595808
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||||||||||||| ||||| ||||||||||| ||||    
T  12595848 caaaagataaaataaagttaaattgttttcatataaactat 12595808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 17498668 - 17498712
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  17498668 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 17498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 19177403 - 19177487
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||| ||||| ||||||||||  ||||| |  | || |||||||||| ||||| || | ||||||||||| ||||||||||    
T  19177403 ttatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagttg 19177487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 21782706 - 21782654
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 108  Q
    |||||||||||| |||| ||||| | || |||||| |||||||||||||||||    
T  21782706 aagtgtttatgtttaagctatttctataacaaaagctaaaataaagtcaaatt 21782654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 28586911 - 28586839
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| | ||| |||||||||   ||||| | || |||||||||||||||||||||| | |||||||||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 40534110 - 40534193
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtacc--aaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||| |||   ||||||||||| ||||| | |||   ||||||| ||||||| ||| |||||||||||||||    
T  40534110 ataagcgcttatcatataaggacttatgtataagctatttctatacacgaaaagatgaaataaaatcacattattttcatataa 40534193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 37788786 - 37788868
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  37788786 tatcatacaagtgtttatgtataagttatttta-taacaaaagataaaataaagtccaattattttcgtataatctataagttg 37788868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 38462204 - 38462277
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    ||||||||| |||||||||| |||||| ||||| | ||||||||||||||||||||||||| | ||||||||||    
T  38462204 cttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatata 38462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 1395611 - 1395673
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||||| ||||| | || |||||||||||||||||||||||||||||||||||| ||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 16790502 - 16790432
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||| ||||| ||||||||||| ||||||| || ||| |||||||||||| ||||||||||||||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcata 16790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 29771751 - 29771817
Alignment:
Q  65 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||| | |||||||||| ||| |||||| ||||||||||||||||| ||||||||||    
T  29771751 tgtataagttatttctataccaaaagacaaagtaaagtgaaattattttcatataaactataagttg 29771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 33307727 - 33307653
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||| ||||| ||||||||||| |||||  ||| ||||| || |||||||||||||||||||||||||||    
T  33307727 cttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataa 33307653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 36783488 - 36783402
Alignment:
Q  41 aagcgcttatcat-acaagtgtttatgtataa-gttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    ||||||||||||| | |||||||||||||||| | ||||| | ||||||||||||||||||||| ||||| ||||||||||| ||||    
T  36783488 aagcgcttatcatgataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactat 36783402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 43116574 - 43116492
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 129  Q
    ||||||||||||||||||||| |||| ||||| | || ||||||||||||| || |||||  |||||||||||| ||||||||    
T  43116574 ttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagt 43116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 3182515 - 3182438
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||| |||||||||  |||||||||||||||||||| || | ||  ||||||||||||||||||||||| ||||||||    
T  3182515 taagtgcttatcatttaagtgtttatgtataagttacttctatagaaaaagataaaataaagtcaaattgttttcata 3182438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 20349629 - 20349549
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| |||||||||| |||||||| |||||||| |||||  ||| |||| |||||||| ||||| ||||||||||||||||    
T  20349629 taagtgcttatcatataagtgtttgtgtataagctatttcagtaacaaaggataaaatgaagtctaattattttcatataa 20349549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 44374792 - 44374720
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||| ||||| ||||||||||| ||| | | || |||||||||||||||||||||||| ||||||||    
T  44374792 gcttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 49772815 - 49772747
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 114  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||| ||||||||||||| |||| |||||    
T  49772815 cttatcatataagtgtttatgtataagctatttttgtaataaaaaataaaataaagtctaattgttttc 49772747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 48397587 - 48397654
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| |||| || ||| ||||||||||    
T  48397587 atgtataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttg 48397654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 22214833 - 22214743
Alignment:
Q  41 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||| |||||| || |||||  ||||||||| |||||| | || |||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  22214833 aagcacttatcgtataagtgcgtatgtataaattatttctataacaaaggataaaataaagtgaaattgtattcatataacctataagttg 22214743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 28779274 - 28779364
Alignment:
Q  41 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||| || || || |||||||| | ||||| || ||  |||| ||||||||||||| ||||||||||||| ||||||||||    
T  28779274 aagcgcttatcatataattgcttttgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagctataagttg 28779364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 32555089 - 32555043
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  32555089 caaaagataaaataaagtcaaattattttcctataagctataagttg 32555043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 3757981 - 3758042
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||| ||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||||    
T  3757981 aagtgcttatgtataagctatttttgtaacaaaatataaaataaagtcaaactcttttcata 3758042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 4990691 - 4990630
Alignment:
Q  59 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||||| |||| |||| |||||||| |||||||| | |||||||||||    
T  4990691 tgtttatgtataagttatttctgtatcaaaggataaaatgaagtcaaacttttttcatataa 4990630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 20192743 - 20192671
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||| ||||||||||| ||||| | || ||||||||||||||||||||||   ||||||||||| |||||||    
T  20192743 aagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataag 20192671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 32703062 - 32703142
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||| || |||||||||||||| ||||| | |   ||||||||||||||| ||||||| ||||||||||| ||||||    
T  32703062 ttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 37689509 - 37689450
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||| ||||||| || ||||||||||| |||||| ||||||||||||||||| ||||||    
T  37689509 ataagctatttttataacaaaagataaagtaaagttaaattattttcatataagctataa 37689450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 39971242 - 39971309
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    ||||||||| ||||| |||||||||||||| || | || ||||||||||||||||| |||||| ||||    
T  39971242 cttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaattgtttt 39971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 24235811 - 24235745
Alignment:
Q  65 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||| | || |||||||||| ||||||||||| |||||  |||||| ||||||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttg 24235745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 24605153 - 24605103
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  24605153 aagtgtttatgtataagttatttctataacaaaagatgaaataaagtcaaa 24605103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 48365010 - 48364956
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    |||||||||||||||||   || |||||||||||||||||||||||| |||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 16790242 - 16790181
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    ||||||| |||||||| ||||| |||| |||||||||||| | || ||||||||||||||||    
T  16790242 ataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 22232742 - 22232823
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||| ||||||||| || || | ||||||||| ||||| | || |||| ||||||||||||||||| | |||||||||||    
T  22232742 ataagctcttatcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataa 22232823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 24268309 - 24268228
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa-ttattttcatata 119  Q
    ||||||| |||||||||||||| ||||||||||  ||||| | || |||||| |||||| |||||||| || ||||||||||    
T  24268309 ataagcgtttatcatacaagtgcttatgtataaactatttctatagcaaaagttaaaatcaagtcaaactttttttcatata 24268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 25195386 - 25195419
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatat 118  Q
    ||||||||||||||||||||||||||||||||||    
T  25195386 caaaagataaaataaagtcaaattattttcatat 25195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 27792796 - 27792869
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||| ||||||||||| |||||    | ||||||||||||||| |||||| |||||||||||||    
T  27792796 ttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataa 27792869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 53736251 - 53736186
Alignment:
Q  55 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||| ||| |||| |||||||| | || ||||||||||||||| |||||| |||||||||||||    
T  53736251 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 53736186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 54775052 - 54775125
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||| ||| || |||||||||| | || ||||||||||||||||||||||  ||||| ||||||    
T  54775052 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 54775125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 2865765 - 2865721
Alignment:
Q  87 aaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  2865765 aaagttaaaacaaagtcaaattgttttcatataacctataagttg 2865721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 8142847 - 8142803
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||    
T  8142847 aagtgtttatgtataagctatttttatatcaaaagataaaataaa 8142803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 10101601 - 10101549
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| | || |||||||||||||||||| ||||| |||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataa 10101549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 10212526 - 10212474
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| | || |||||||||||||||||| ||||| |||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataa 10212474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 21574408 - 21574495
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||| ||||| ||||  |||||||||||||| |||| ||||| ||| | ||||||||||||||| ||||| ||| ||||||| ||||||    
T  21574408 ataaacgcttctcatgtaagtgtttatgtatgagttgtttttatac-acaagataaaataaagttaaattgtttacatataagctataa 21574495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 23530322 - 23530246
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatta-ttttcatataacctataagttg 131  Q
    ||||| ||| ||| ||| || |||| || ||||||||||||||||||||||||| |||||||||||  |||||||||    
T  23530322 aagtgcttacgtagaagctagttttctaacaaaagataaaataaagtcaaattatttttcatataaagtataagttg 23530246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 30669104 - 30669036
Alignment:
Q  59 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||||| ||||||| || ||||||||||||||| ||  |||| ||||| ||||| ||||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaaataatgttgaatttttttcttataaactataa 30669036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 36646527 - 36646455
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||| || |||||| ||||| | |  ||||||||||||||||||  |||| |||||||||||    
T  36646527 tatcatacaagtgttgatatataagctatttctatgacaaaagataaaataaagtataattgttttcatataa 36646455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 41028999 - 41028939
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    |||||||||| ||||| ||||||||||| ||||| | || ||||||| |||||||||||||    
T  41028999 gcttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 32663566 - 32663636
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 118  Q
    ||||||||||| |||||||| ||||||||||| | || |||||||| |||||| ||||||  ||||||||||    
T  32663566 ttatcatacaattgtttatgcataagttatttctataacaaaagat-aaataaggtcaaacaattttcatat 32663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 36283703 - 36283659
Alignment:
Q  60 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  36283703 gtttatgtataagttatttttgta--acaagataaaataaagtcaaa 36283659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 25129748 - 25129833
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 126  Q
    ||||| |||| ||||||| || |||||||||| |||||  | |||||||||||| |||||||||||| |  |||||||||| |||||    
T  25129748 taagcacttaccatacaa-tgcttatgtataacttattcctataccaaaagatacaataaagtcaaactgctttcatataatctata 25129833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 119
Target Start/End: Original strand, 26990696 - 26990730
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatata 119  Q
    |||||||||||||||||||||||| ||||||||||    
T  26990696 caaaagataaaataaagtcaaattcttttcatata 26990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 36101490 - 36101576
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||| | ||||| ||||| ||||| ||||| ||||  | ||||||||||||||||||| |  |||| ||||| ||||||||||    
T  36101490 gcttatcaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttg 36101576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 49587042 - 49586984
Alignment:
Q  67 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||| ||||| | || |||||||||||||||||||||| | ||||||||||| ||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 53457301 - 53457371
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||  ||||||||| ||||||| || ||   || |||||||||||||||||||||| ||||||||||    
T  53457301 ttatcatttaagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaaactattttcata 53457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 2128384 - 2128331
Alignment:
Q  60 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    ||||||||||||| ||||| | || |||||||||||||||||| ||||| ||||    
T  2128384 gtttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 3467491 - 3467450
Alignment:
Q  90 gataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||||| ||||||||||  ||||||||||    
T  3467491 gataaaataaagtcaaattgttttcatatagactataagttg 3467450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 9279480 - 9279439
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttattttt 80  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  9279480 ataagcgcttatcatataagcatttatgtataagttattttt 9279439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 25183134 - 25183053
Alignment:
Q  48 tatcatacaagtgttta-tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||| ||||||||| |||||||  ||||||| || |||||||| ||||||||| ||  ||||||||||| | |||||||    
T  25183134 tatcatataagtgtttaatgtataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctataag 25183053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 26599140 - 26599185
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||    
T  26599140 caaaagataaaataaagtcaaatagttttcatataaggtataagtt 26599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 28283730 - 28283653
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||| |||||||| ||||| ||||| |||||||| || | || |||||||||||   |||||||| ||||||||||    
T  28283730 taagcgtttatcatataagtgcttatgcataagttacttctataacaaaagataaatgtaagtcaaactattttcata 28283653  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 33882969 - 33883018
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    |||||||| |||||| | || |||||||||||||||||| ||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagtgaaattatttt 33883018  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 40122883 - 40122815
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| |||||   || |||||||||||||||||||||| | |||||||| || ||||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttg 40122815  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 41159030 - 41159091
Alignment:
Q  44 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    |||||||| || ||||| ||||||||||||||||  | || | |||||||||||||||||||    
T  41159030 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 41159091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 49546624 - 49546575
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    ||||| |||||| |||| ||||||| || |||||||||||||||||||||    
T  49546624 aagtgcttatgtgtaagatatttttataacaaaagataaaataaagtcaa 49546575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 49739483 - 49739544
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    |||||||||| ||||| ||||| | ||||||||| |||||||  | ||||||||||||||||    
T  49739483 ataagcgcttttcatataagtggtgatgtataagctatttttacatcaaaagataaaataaa 49739544  T

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Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 52413258 - 52413197
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||| ||||||||||| ||||||| || ||||||||| |||||| | ||| ||||||||||    
T  52413258 aagtgcttatgtataagctatttttataacaaaagatagaataaaatgaaactattttcata 52413197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 905115 - 905043
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| ||| | ||| ||||||| ||||| | || ||||||||||||||||||||| || ||| |||||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataa 905043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 8007837 - 8007761
Alignment:
Q  51 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||| | ||||||||||| | ||| | || ||||||||||| |||||||||| | || |||||||| ||||||    
T  8007837 catacaagggcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 8007761  T

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Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 10357378 - 10357430
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| | || ||||||||||||||| || ||||| |||||||||||    
T  10357378 ataagttatttctataacaaaagataaaataatgttaaatttttttcatataa 10357430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||| ||||| | || |||||||||||||||||| ||||| |||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 23315591 - 23315631
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||||||||| ||||||||||  |||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataag 23315631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 25964359 - 25964419
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    |||| |||||||||| ||||  || |||||||| ||||||| || ||||||||||||||||    
T  25964359 taagtgcttatcatataagttcttttgtataagctatttttataacaaaagataaaataaa 25964419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 28843011 - 28842971
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttt 79  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  28843011 ataagcgcttatcatataagtgcttatgtataagctatttt 28842971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 42039092 - 42039140
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 104  Q
    ||||| ||||||||||| ||||| |||| ||||| ||||||||||||||    
T  42039092 aagtgcttatgtataagctatttctgtaacaaaaaataaaataaagtca 42039140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 42809242 - 42809298
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||| ||||| | || |||||||||||||| ||| ||||| |||||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataa 42809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 3217344 - 3217263
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| |||||||| ||||| ||||||||||| ||||||||||  | |||||||||||||||||||||||||||||||||    
T  3217344 ataagcgattatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataa 3217263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 32975894 - 32975961
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  32975894 ataagcgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaa 32975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 24836336 - 24836262
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  24836336 aagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 29274376 - 29274295
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||| || || ||||||||||| ||||| | || |||||||||||||||||||||||| ||||||||||| ||||||    
T  29274376 cttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 2027530 - 2027471
Alignment:
Q  69 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataag 2027471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 22742282 - 22742371
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||| || ||||  |||| |||||| ||||| | || |||| ||||||||||||||||||| ||||||||||| |||||||    
T  22742282 ataagcgcttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataag 22742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 10452505 - 10452422
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||  |||| ||||||||||| ||||| | || ||||| |||||||||| ||||| ||||||||||||| ||||||||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttg 10452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 28531694 - 28531627
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 107  Q
    ||||||||||||||| ||||| |  |||||||||||||| | || |||||||||||||||||||||||    
T  28531694 taagcgcttatcataaaagtgctcttgtataagttatttatataacaaaagataaaataaagtcaaat 28531627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 27595674 - 27595630
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  27595674 aaaagataaaataaagtcaaattattttcatataagctgtaagtt 27595630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 4006647 - 4006722
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||| ||||| ||||| ||||| | || |||| ||||||||||||||||||| |||| |||||| ||||||||||    
T  4006647 aagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttg 4006722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 11340777 - 11340687
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  11340777 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 11340687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 2206506 - 2206592
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||| |||||| || |||  ||| |||||||||||||||| || ||||||||||||||||||  |||| |||| |||||| ||||    
T  2206506 ataagctcttatcgtataagcatttctgtataagttatttttataacaaaagataaaataaagtataattgtttttatataagctat 2206592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 7785866 - 7785808
Alignment:
Q  69 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||| || | ||||||||||||||||||||||||| | ||||||||||| ||||||    
T  7785866 taagttacttatataccaaaagataaaataaagtcaaactcttttcatataagctataa 7785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 8349811 - 8349737
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||| |||||||| |||||||  ||||| | || |||||||||||||||||| ||||| |||| ||||||    
T  8349811 cttatcatataagtgtttgtgtataaactatttctctaacaaaagataaaataaagttaaattgtttttatataa 8349737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 10032494 - 10032576
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||| || |||||||||||||| ||||||| || ||| || | |||||||| |||| || |||||||||| |||||||    
T  10032494 cttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataag 10032576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 2514624 - 2514709
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||||||  ||||| ||||||||||| ||||| | ||  ||||||||||||||||||||| || ||| |||| | |||||||||    
T  2514624 gcttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagtt 2514709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 3155092 - 3155181
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||| |||||||| || || ||||||||||| ||| | | |  |||||||||||| ||||||||| | ||| |||||||||||||||    
T  3155092 ataagcgtttatcatataaatggttatgtataagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataag 3155181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 4248874 - 4248943
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 108  Q
    |||||||||| ||||| ||||| |||| |||||| |||||   || ||||||||||||||||||||||||    
T  4248874 ataagcgcttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaatt 4248943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 5328898 - 5328971
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||| ||| || |||||||||| | || ||||||||||||||||||||||  ||||| ||||||    
T  5328898 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 5328971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 10400186 - 10400274
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagat-aaaataaagtcaaattattttcatataacctataag 128  Q
    |||| |||||||||| || |||||||||||||| || |||| ||  ||||||| |||||||||||||||| || |||||||| |||||||    
T  10400186 taagggcttatcatataaatgtttatgtataagcta-ttttataataaaagataaaaataaagtcaaattgttatcatataagctataag 10400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 10749381 - 10749301
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| |||||||| |||   |||||||||||| |||| | ||  ||||||||||||||||| |||||||||||||||||    
T  10749381 ataagcgtttatcatataagatgttatgtataagt-atttctataataaaagataaaataaagttaaattattttcatataa 10749301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 31672621 - 31672544
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||| |||||||||||||||||||||||||  |||||   |  ||||| |||||||||||||||| | ||||||||    
T  31672621 taagcgattatcatacaagtgtttatgtataaactatttccatgacaaaaaataaaataaagtcaaactgttttcata 31672544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 33068715 - 33068634
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||| | || || ||||||||||||||||| | || |||||||||||||||  ||||| | |||||| ||||    
T  33068715 ataagcgcttatcaaataaatgcttatgtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataa 33068634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 5554917 - 5554861
Alignment:
Q  41 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat 97  Q
    |||||| ||||||| | ||||||||||||||||||||| | || |||||||||||||    
T  5554917 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 5554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 7713950 - 7714022
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| ||| | ||||||||||  || |||  || |||||||||||||||||||||||| |||||||||||    
T  7713950 tatcatataagagcttatgtataaactactttcataacaaaagataaaataaagtcaaattgttttcatataa 7714022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 20672002 - 20671938
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||| ||||||||||| ||||| |  | |||||||||||||||||||||||| ||||| |||||    
T  20672002 aagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataa 20671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 21959652 - 21959732
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||| ||||| ||| ||||||| |||||   || ||||||||||||||||||||| || ||| ||||||| ||||||    
T  21959652 ttatcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctataa 21959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 27693544 - 27693512
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||||||||||||||||||    
T  27693544 aagataaaataaagtcaaattattttcatataa 27693512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 281956 - 281913
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  281956 caaaagataaaataaagtcaacttgttttcatataagctataag 281913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 7354126 - 7354201
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| |||||||||| || ||||||||  ||||| | || |||||||||||||||| || || |||||||||||||    
T  7354126 gcttttcatacaagttttcatgtataaactatttctataacaaaagataaaataaaatcgaactattttcatataa 7354201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 27713469 - 27713504
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||||||||| |||||||||||    
T  27713469 caaaagataaaataaagtcaaattcttttcatataa 27713504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 27857319 - 27857358
Alignment:
Q  67 tataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  27857319 tataagttacttttgtaacaaaagataaaataaagtcaaa 27857358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 32513759 - 32513821
Alignment:
Q  57 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||| ||||||||||| | || ||||| |||||||||||||||| ||||| |||||||    
T  32513759 agtgtttatgcataagttatttctataacaaaa-ataaaataaagtcaaactatttccatataa 32513821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 1402958 - 1403000
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||    
T  1402958 caaaagataaaataaagttaaactattttcatataagctataa 1403000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 2117365 - 2117411
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||| ||||||| ||||||||| ||||||||||||| ||||||||||    
T  2117365 caaaggataaaacaaagtcaaactattttcatataatctataagttg 2117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 6078443 - 6078365
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||||||||||| ||| ||| |||| || ||||| | |  || ||| ||||||||||||||||| ||||||||    
T  6078443 ataagcgcttatcatacatgtggttacgtatgagctatttctatcacagaaggtaaaataaagtcaaattgttttcata 6078365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 9093687 - 9093621
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||| ||||| ||||| | || |||||||||||||||||| ||||| ||||| ||||| |||||||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataag 9093621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 24476541 - 24476599
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| ||||| | || |||||||||||||  ||| |||||||||||||||||    
T  24476541 ttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataa 24476599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 28660234 - 28660160
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat-aaagtcaaattattttcatata 119  Q
    ||||||||| |||||||||| ||||| |||||||| |   |||||||||||| ||||||||||| |||| |||||    
T  28660234 cttatcatataagtgtttatatataaattatttttatgataaaagataaaataaaagtcaaattgttttgatata 28660160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 28660879 - 28660833
Alignment:
Q  74 tatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| || ||| |||||||||||||| |||||||||||||||||    
T  28660879 tatttttataacaatagataaaataaagttaaattattttcatataa 28660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 34429826 - 34429752
Alignment:
Q  57 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||| ||||||||||||||||| | ||  || ||||||||||||||| || | ||||| ||||| ||||||||||    
T  34429826 agtgattatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 1497903 - 1497976
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgta-ccaaaagataaaataaagtcaaattattttcatat 118  Q
    ||||||||  ||||| |||||| |||| ||||||| || ||||||| ||||||||||||||| | |||||||||    
T  1497903 cttatcatttaagtgcttatgtttaagctatttttttaaccaaaaggtaaaataaagtcaaactgttttcatat 1497976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 120
Target Start/End: Complemental strand, 2732341 - 2732312
Alignment:
Q  91 ataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||||||||||||||||||    
T  2732341 ataaaataaagtcaaattattttcatataa 2732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 4325454 - 4325381
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||| |||||| |||||||||| | ||  ||| ||||||||| || |||| |||||||||||||    
T  4325454 ttatcatataagtgcttatgtctaagttatttctataataaatgataaaatagagacaaactattttcatataa 4325381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 8420345 - 8420284
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||||| ||||| ||||||| ||||||||| | ||  ||| |||||||||||||||||    
T  8420345 gcttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaa 8420284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 11363475 - 11363430
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||| ||||||||||||| |||  |||||||||    
T  11363475 aaaagataaaataaagttaaattattttcatgtaagttataagttg 11363430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 2027931 - 2027891
Alignment:
Q  66 gtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  2027931 gtataagctatttttgtattaaaagataaaataaagtcaaa 2027891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 2034579 - 2034512
Alignment:
Q  52 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||| ||||||||||| | |||||  | |||| ||||||||||||||||| || ||||||||||    
T  2034579 atacaagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa 2034512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 9559672 - 9559620
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 114  Q
    ||||||||||||||||| | || |||||||||||||||| | ||||| |||||    
T  9559672 ttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttc 9559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 29940725 - 29940789
Alignment:
Q  52 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    ||||||||| ||| ||||||| | ||| | || ||||||||||||||||||||| || |||||||    
T  29940725 atacaagtgcttaagtataagctttttctataacaaaagataaaataaagtcaatttgttttcat 29940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 33116538 - 33116578
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaa 96  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  33116538 aagtgtttatgtataagttatttctttaacaaaagataaaa 33116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 27492 - 27584
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| ||||||||  ||||| ||||||||||||||||| | || || ||||||||||||||||||||| ||||||||||| ||||||||||    
T  27492 ataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttg 27584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 21409 - 21351
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| ||||||| ||  ||||||||||||||||| ||||| ||||| |||||    
T  21409 ttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataa 21351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 4200145 - 4200232
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 126  Q
    |||||| ||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || ||||||||||| |||||    
T  4200145 ataagcacttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctata 4200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 15360826 - 15360902
Alignment:
Q  55 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||| |||||||| | || |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  15360826 caagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttg 15360902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 45990211 - 45990122
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 129  Q
    |||| ||||||||||||| || | ||||||| | ||||||| || |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  45990211 taagagcttatcatacaaatgctaatgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 870962 - 871042
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||| ||||| ||||||||||  ||||||| || ||||||||||||| ||||||| || |||||||||||    
T  870962 taagcgcttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcatataa 871042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 28467456 - 28467369
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtac--caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| ||| ||||||||||  ||||| ||||   |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  28467456 cttatcatacaggtgattatgtataacctatttgtgtataacaaaagataaaataaagtcaaattattttcatataagctacaagttg 28467369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 7274093 - 7274015
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||| |||||||||| || || ||||||||| ||||||||| || |||||||| ||||||||||||||| ||||||||    
T  7274093 ataagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 49516985 - 49517075
Alignment:
Q  39 ataagcgcttatcatacaagt-gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||||| |||||||| || | |||| |||||||||||||| | || |||||||||||||||||||||||| ||||||| ||| |||||||    
T  49516985 ataagcgtttatcatataaattgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataag 49517075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 44032145 - 44032065
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||| |||||||||||||||||   ||| | || |||||| ||||||||||||||||| ||||||||||| ||||||    
T  44032145 ttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 48830210 - 48830142
Alignment:
Q  59 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||||||||||| | |  | |||||||||||||||||||| ||||||||||||| ||||||    
T  48830210 tgtttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataa 48830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 289168 - 289225
Alignment:
Q  51 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 108  Q
    |||| ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  289168 catataagtgcttaagtataagctatttttgtagcaaaagataaaataaagtcaaatt 289225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 17269177 - 17269258
Alignment:
Q  50 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||| ||||| ||||||||||||||||| |  | ||||||  |||||||||||||||| ||||||||||| | ||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttg 17269258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 29007847 - 29007778
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| |||||||||| | || ||||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  29007847 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttg 29007778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 43372113 - 43372025
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||||||| ||  | ||||||||| | ||||| | || ||| |||||||||| |||||||||||||||| |||| ||||||    
T  43372113 ataagcgcttatcatataatggcttatgtataggctatttctataacaatagataaaatagagtcaaattattttcacataagctataa 43372025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 16982090 - 16982027
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagt 102  Q
    ||||| |||||||||| |||||||||||||||| ||||||   || ||||||||||||||||||    
T  16982090 ataagagcttatcatataagtgtttatgtataacttatttcgataacaaaagataaaataaagt 16982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 29794057 - 29793991
Alignment:
Q  58 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||| |||||| |||| ||||    
T  29794057 gtgtttatgtataggctatttttgtaacaaaagataaaat-aagtcaaattgttttcaaataagctat 29793991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 50998468 - 50998555
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 126  Q
    ||||||| |||||||| | | | ||||||||||| ||||| |||| |||||||||||| ||| ||||| || |||||||||| |||||    
T  50998468 ataagcgtttatcatataggcgcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctata 50998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 27738288 - 27738246
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  27738288 caaaagataaaataaagtcaaattgttttcatataagctataa 27738246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 30371110 - 30371156
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  30371110 caaaagataaaataaactcaaattgttttcatataagctataagttg 30371156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 33339566 - 33339500
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 113  Q
    |||||||| | ||||||||||||||| ||||| | |||||||||||||||| |||| ||| ||||||    
T  33339566 ttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagttaaactatttt 33339500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 4256177 - 4256108
Alignment:
Q  58 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||||||| ||||| |  | ||||||||| |||||||| ||||||||||| ||||| ||||||    
T  4256177 gtgtttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctataa 4256108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 7218181 - 7218136
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  7218181 aaaaggtaaaataaagtcaaattgttttcatataagctataagttg 7218136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 44936713 - 44936656
Alignment:
Q  70 aagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||| | || |||||||||| ||||||||||| ||||||||||||| ||||||    
T  44936713 aagttatttctataacaaaagataagataaagtcaaactattttcatataagctataa 44936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 46980275 - 46980202
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| |||||  |||| ||||||| ||||| || ||||||||||||||||| |||| | |||||||||||    
T  46980275 ttatcatataagtgcatatgcataagttgtttttatatcaaaagataaaataaagacaaactgttttcatataa 46980202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 49557064 - 49557149
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||| ||||| |  |||||||||||||| | || |||||||||||||||||| ||||  | ||||| ||| ||||||||||    
T  49557064 cttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttg 49557149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 52286597 - 52286682
Alignment:
Q  42 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||||| ||| | ||||| ||||| ||||| |  | |||||||||||||||||| |||  |||||||||||| ||||||    
T  52286597 agcgcttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataa 52286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 1233029 - 1232965
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||| ||||| | ||||| || ||||| |||||||||||| ||||||||||| |||||    
T  1233029 aagtgtttatgcataagctgtttttataacaaaacataaaataaagttaaattattttcgtataa 1232965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 1730825 - 1730881
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 112  Q
    ||||| ||||||||||| ||||||| || | |||||||||||||||||||| |||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaaactattt 1730881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 10439648 - 10439688
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctat 125  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  10439648 caaaagataaaatgaagtcaaattattttcatataagctat 10439688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 11218235 - 11218175
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    |||||| |||||||| ||||||||||||||||||||||| | |  |||||||| |||||||    
T  11218235 taagcgtttatcatataagtgtttatgtataagttatttatatgtcaaaagattaaataaa 11218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 11560686 - 11560622
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||| ||||||| ||||||| || ||||||||||||| || ||||||| |||| ||||||    
T  11560686 aagtgtttaggtataagctatttttatagcaaaagataaaatcaaatcaaattgtttttatataa 11560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 14737829 - 14737781
Alignment:
Q  69 taagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||| | || |||||||||||||||||||||||| ||||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 15361678 - 15361718
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  15361678 aagataaagtaaagtcaaattattttcatataagctataag 15361718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 17420119 - 17420207
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||| || | ||||  ||||||||||  ||||||| ||  |||||||||||||||||| ||  |||||||||||| ||||||    
T  17420119 ataagcgcttagcacataagtacttatgtataaactatttttataagaaaagataaaataaagtcgaacaattttcatataagctataa 17420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 23895252 - 23895332
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    |||||| ||||||||| ||||  ||||||||||| ||||| | || |||||||||||||||| ||||| | || |||||||    
T  23895252 ataagcccttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatata 23895332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 29723454 - 29723506
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 140  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||||||| |||||    
T  29723454 aagataaaataaactcaaactattttcatatatgctataagttgctttcacaa 29723506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 36641814 - 36641862
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattat 110  Q
    |||| |||||||||||| | || ||||||||||||||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaaataaagtcaaattat 36641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 42336583 - 42336659
Alignment:
Q  44 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| ||||||  |||| ||||||||| ||||||||| || ||||| |||||||||||||||   ||||||||||||    
T  42336583 cgctcatcatattagtgcttatgtataggttatttttataacaaaaaataaaataaagtcaagcaattttcatataa 42336659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 4215311 - 4215374
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||| |||||||||||||  || |||| ||||||||||||||||| | ||||||||||| ||||    
T  4215311 ttatatataagttattttgatagcaaatgataaaataaagtcaaactgttttcatataaactat 4215374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 9656612 - 9656655
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||    
T  9656612 caaaaaataaaataaagttaaattattttcatataagctataag 9656655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 25006135 - 25006096
Alignment:
Q  92 taaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttg 25006096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 36151637 - 36151578
Alignment:
Q  61 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||| |||||   || |||||||||||||||||||||||| ||||| |||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataa 36151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 117
Target Start/End: Original strand, 45234160 - 45234191
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcata 117  Q
    ||||||||||||||||||||||||||||||||    
T  45234160 aaaagataaaataaagtcaaattattttcata 45234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 47877084 - 47877127
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||    
T  47877084 caaaagataaaataaaatcaaattgttttcatataaactataag 47877127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 50319231 - 50319286
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||||||||| ||||| | || ||||||||||||||||||||| || ||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 5422028 - 5421982
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||| ||||||||| ||||| ||||| ||||||||||    
T  5422028 caaaagataaaatatagtcaaattgttttcttataagctataagttg 5421982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 4202282 - 4202217
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    |||||| |||||||| ||||| ||| ||||||||||||| | || |||||||||||  ||||||||    
T  4202282 taagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaa 4202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 4304277 - 4304354
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    |||||||||||||||| || ||||||| |||||||  ||| || | |||| |||||||| |||||||| | |||||||    
T  4304277 ataagcgcttatcatataactgtttatatataagtcgtttctgcaacaaacgataaaattaagtcaaaatcttttcat 4304354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 5592792 - 5592747
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||    
T  5592792 aaaagataaaataaagtcgaattgttgtcatataagctataagttg 5592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 6933090 - 6933037
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||  |||||| || ||||| |||||||||||||||||| ||||||||    
T  6933090 atgtataagccatttttataacaaaacataaaataaagtcaaattgttttcata 6933037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 10854655 - 10854716
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||||| ||||| ||||| ||||||||||| || |  | |||||||||||||||||||    
T  10854655 gcttatcatataagtggttatgaataagttatttctgaaatacaagataaaataaagtcaaa 10854716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 11211062 - 11211115
Alignment:
Q  67 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||| |  | |||||||||||||||||| ||||| |||||||||||    
T  11211062 tataagttatttctagaacaaaagataaaataaagttaaatttttttcatataa 11211115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 30815789 - 30815708
Alignment:
Q  40 taagcgcttatcatacaagtg-tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||| || |  ||||||| |||| | ||| | || |||||||||||||||||| ||| |||||||||||||    
T  30815789 taagcgcttatcatataattactttatgtctaagctttttctataacaaaagataaaataaagttaaactattttcatataa 30815708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 36602714 - 36602783
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    |||||||| ||||| ||||||||||| ||| | |  | ||| ||||||||||||||||||| ||||||||    
T  36602714 ttatcatataagtgattatgtataagctatatctacaacaatagataaaataaagtcaaatcattttcat 36602783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 37818380 - 37818465
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataaccta 124  Q
    |||||| |||| || | ||||| ||||||||||||||||| | || ||| ||||||||  |||||||| ||||||| |||| ||||    
T  37818380 ataagcacttaccaaataagtgcttatgtataagttatttctataacaagagataaaacgaagtcaaactattttcgtatatccta 37818465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 44940259 - 44940324
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 104  Q
    |||| ||||||||||| || ||  ||||||||  |||||||| || ||||||||||||||||||||    
T  44940259 ataatcgcttatcatataattgcgtatgtatagcttatttttatagcaaaagataaaataaagtca 44940324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 45205031 - 45205076
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||||||||| ||||| ||||||| ||| ||||||    
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttg 45205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 27140418 - 27140482
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||| |||||||||| | || |||||||||||||||  | ||||| |||| ||||||    
T  27140418 aagtgtttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataa 27140482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 38867959 - 38867907
Alignment:
Q  67 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    |||||| ||||| | ||||||||||| ||||||||||||| | ||||||||||    
T  38867959 tataagctatttctataccaaaagattaaataaagtcaaaatgttttcatata 38867907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 40358039 - 40357963
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 116  Q
    |||| |||||| ||| |||||  |||||||||| ||||| | || |||  ||||||||||||||||||| |||||||    
T  40358039 taagtgcttattatataagtgactatgtataagctatttctataacaatggataaaataaagtcaaattgttttcat 40357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 41516188 - 41516148
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctat 125  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  41516188 caaaagataaaagaaagtcaaactattttcatataagctat 41516148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 41638463 - 41638399
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 104  Q
    ||||| ||||||||| ||||| |||||||||| |||||| |  | || |||||||||||||||||    
T  41638463 taagcacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtca 41638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 45107548 - 45107619
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| ||||| |||| |||||| ||||| | ||  |||| |||||||||||||||| |||||||||||||    
T  45107548 tatcatataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataa 45107619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 48282053 - 48282125
Alignment:
Q  43 gcgcttatcatacaagtgtttatgtataagttatttttgtacca-aaagataaaataaagtcaaattattttc 114  Q
    |||||||||||| ||||| ||||||| ||| ||||| | ||  | |||||||||||||||||||| |||||||    
T  48282053 gcgcttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttc 48282125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 52559957 - 52559901
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| |||| | | || ||||| |||||||||||||||||||||||| |||||    
T  52559957 atgtataaattatatctataacaaaatataaaataaagtcaaattattttcgtataa 52559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 8680929 - 8680986
Alignment:
Q  60 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8680929 gtttatgtataagttatttttgtaacaaaagatataataaagtcaaattattttcata 8680986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 49060462 - 49060547
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||||||| |||| |||||||||||| ||||| | || ||||| ||||||||||||||||||||||| |||||| |||||||||    
T  49060462 gcttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagtt 49060547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 30133967 - 30134046
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||||  |||||||||||||||| |||||||  | ||||||||||||||||||||| || ||||| |||||    
T  30133967 ataagcgcttatcata--agtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataa 30134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 30496622 - 30496712
Alignment:
Q  41 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||| ||||| | ||||||||||||||||  ||||| | || ||||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  30496622 aagcgcatatcacataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttg 30496712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 45813311 - 45813242
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||| |||||| ||||| | |||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  45813311 ttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttg 45813242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 30751441 - 30751513
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    |||||||| ||||| || || ||||  |||||||||| ||||| |||||||||||||||||||||||||||||    
T  30751441 ttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaaattattttcatata 30751513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 1417201 - 1417272
Alignment:
Q  60 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||  ||||| | || |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttg 1417272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 44241781 - 44241867
Alignment:
Q  44 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| |||||| |||||||||||||||| | || ||| ||||||||||||||  || ||||||  ||||||||||||||||    
T  44241781 cgcttatcatataagtgtgtatgtataagttatttctataacaacagataaaataaagt-taactatttttgtataacctataagttg 44241867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 23918891 - 23918961
Alignment:
Q  57 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||| |||||||| | | |  |||||||||||||||||||||||| ||||||||||| ||||||    
T  23918891 agtgtttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 27121741 - 27121659
Alignment:
Q  38 aataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||||| || |  ||||||||||| ||||| | ||  ||| ||||||||||||||||||| |||||||||||    
T  27121741 aataagcgcttatcatataattccttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataa 27121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 35536026 - 35536104
Alignment:
Q  42 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||| ||  | ||||||||||| ||||| | || || ||||||||||||||||||||| |||||||||||    
T  35536026 agcgcttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataa 35536104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 39505890 - 39505940
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  39505890 aagtgtttatgtataagttatttttgtagcaaaagattaaatagagtcaaa 39505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 9527237 - 9527152
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||||| |||| |||| | ||| | | || ||||||||| |||||||||||| | ||||||||||| ||||||||||    
T  9527237 cttatcatacaagtgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttg 9527152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 39591593 - 39591540
Alignment:
Q  67 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||| | || |||||||||||||||||||||||| |||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataa 39591540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 45593865 - 45593792
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| || || ||||||||||| ||||| |||| ||||| |||||||||||||||| | |||||||||||    
T  45593865 ttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataa 45593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 5010614 - 5010530
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||   ||||||  ||||||||| |||| ||||| |||||||||||| |||||||||| ||||||  |||||||||    
T  5010614 ttatcatacaagaagttatgtgcaagttatttatgtaacaaaatataaaataaagtgaaattatttttatataaggtataagttg 5010530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 7453549 - 7453462
Alignment:
Q  42 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa-ttattttcatataacctataag 128  Q
    |||| |||||||| ||| ||| ||||||||| | ||| | || |||||||||||||||||||||| || ||||||||||| |||||||    
T  7453549 agcgtttatcataaaagggttcatgtataagatttttctatagcaaaagataaaataaagtcaaatttgttttcatataagctataag 7453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 28165024 - 28165095
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||| ||||||||||||| ||| | || ||||||||||||| |||||||||| |||| |||||| ||||||    
T  28165024 aagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataa 28165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 31002723 - 31002766
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  31002723 caaaagataaaataaagtcaaaatattttcatataagctataag 31002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 31341110 - 31341177
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    |||||||||||||||  || || ||||||||||| ||||| | || ||||||||||||||||||||||    
T  31341110 ataagcgcttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaataaagtcaaa 31341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 40689094 - 40689051
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  40689094 caaaagataaaataaagttaaattattttcatataagctataag 40689051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 5939017 - 5939067
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||||||||||||||||||||| || ||||| || |||||||||||||    
T  5939017 aagtgtttatgtataagttatttttataacaaaaaattaaataaagtcaaa 5939067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 7244626 - 7244696
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    |||||||| ||||| ||||||||||| ||||| | || |||||||||||| ||||||||| | ||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 991994 - 992067
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||| ||| ||||||||| ||| | || ||||| ||||||||||| |||| |||||||||||||    
T  991994 ttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataa 992067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 3501097 - 3501028
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| || || | ||  |||||||||||||||||||||| ||||||||||||  |||||||||    
T  3501097 ttatgtataagctaattatataataaaagataaaataaagtcaaatcattttcatataaaatataagttg 3501028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 5373136 - 5373233
Alignment:
Q  34 taaaaataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||| |||| |||||||||  ||||| ||||||||| | ||||| | || ||||||||||||||||||| ||  ||||| ||||||  |||||||||    
T  5373136 taaaattaagtgcttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttg 5373233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 22759110 - 22759183
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||| |||||||| |||| ||||| | || |||||||||||||||||  ||||| |||||||||||    
T  22759110 ttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataa 22759183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 25511549 - 25511634
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||||||||| |||||||  ||||||| |||||| | || |||||||| |||||||||||| || |||| ||||||  ||||||||    
T  25511549 gcttatcatataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaatttttttttatataagatataagtt 25511634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 47004011 - 47004092
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||| |||||||||| | |||| ||||| | || ||| |||||||||||||||||| |||||| |||| | |||||||    
T  47004011 ttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataag 47004092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 1431462 - 1431394
Alignment:
Q  39 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 107  Q
    ||||| |||||||||| |||||||||||||||||||||||   ||   ||| |||||||||||||||||    
T  1431462 ataagtgcttatcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaaat 1431394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 1432098 - 1432032
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaat---aaagtcaaattattttcatataacctat 125  Q
    ||||||||||||||||| | || |||||||||||||   ||||| ||||||||||||||||| ||||    
T  1432098 ttatgtataagttatttctataacaaaagataaaataaaaaagttaaattattttcatataagctat 1432032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 2223071 - 2223143
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 118  Q
    |||||| || ||||||||||||||||| ||||| | || |||||||||||  ||||||||||| |||| ||||    
T  2223071 cttatcgtataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaaattgtttttatat 2223143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 30456558 - 30456514
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagt 129  Q
    |||||||||||||||||||||||| |||||||||||  |||||||    
T  30456558 caaaagataaaataaagtcaaattgttttcatataagttataagt 30456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 41875864 - 41875908
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattt 112  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||    
T  41875864 ataagttatttctgtactaaaagataaaataaggtcaaattattt 41875908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 48157253 - 48157173
Alignment:
Q  60 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 140  Q
    |||||||||||| |||||| | ||  ||||||||||||||||| ||||| |||| |||||| |||||| ||| || |||||    
T  48157253 gtttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaa 48157173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 12835045 - 12835002
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||||||||||| ||||||||| | |||||||    
T  12835045 caaaagataaaataaagtcaaattgttttcatattagctataag 12835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 22296333 - 22296294
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  22296333 aagataaaataaagttaaattattttcctataacctataa 22296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 24895330 - 24895373
Alignment:
Q  97 taaagtcaaattattttcatataacctataagttgcttacacaa 140  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  24895330 taaagtcaaattattttcatataagctataagttgttttcacaa 24895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 27481440 - 27481357
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 130  Q
    |||| ||| ||||||||||||||||| ||||| | || |||| |||||||  |||||||| | ||| ||||||| |||||||||    
T  27481440 ttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagtt 27481357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 5272959 - 5272893
Alignment:
Q  54 acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||| |||||||||||||  ||||| | || ||||||||||||| |||||| ||| |||||||||||    
T  5272959 acaactgtttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataa 5272893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 5276157 - 5276207
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||| ||||||||||| ||||||| || |||||||||| |||||||||||    
T  5276157 aagtgcttatgtataagctatttttataacaaaagataacataaagtcaaa 5276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 24909638 - 24909672
Alignment:
Q  97 taaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||||||||||||||||| ||||||||||    
T  24909638 taaagtcaaattattttcatataagctataagttg 24909672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 24973870 - 24973940
Alignment:
Q  49 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    |||||| ||||| ||||||| ||| ||||| | || |||||||||||||||| ||||||| ||| ||||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccatata 24973940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 31149586 - 31149640
Alignment:
Q  62 ttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttca 115  Q
    ||||||||||| ||||| || || |||||||||||||||||| ||||||||||||    
T  31149586 ttatgtataagcttattattataacaaaagataaaataaagtaaaattattttca 31149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 31167878 - 31167932
Alignment:
Q  62 ttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttca 115  Q
    ||||||||||| ||||| || || |||||||||||||||||| ||||||||||||    
T  31167878 ttatgtataagcttattattataacaaaagataaaataaagtaaaattattttca 31167932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 35809041 - 35808991
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 106  Q
    ||||||||||||||||| ||||| | || |||||||||||||| |||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaaa 35808991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 36532289 - 36532343
Alignment:
Q  61 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 115  Q
    ||||||||||||||||   | || |||||||||||| ||||||||||||||||||    
T  36532289 tttatgtataagttatccctataacaaaagataaaacaaagtcaaattattttca 36532343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 38496659 - 38496583
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 126  Q
    ||||||||||||| |||  ||||||||| |||| || ||||| |||||||||| ||||| | |||||||||||||||||    
T  38496659 tatcatacaagtgcttacatataagtta-ttttataacaaaacataaaataaa-tcaaactgttttcatataacctata 38496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 45777279 - 45777233
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||||| |||||||| | ||||||||||| ||||||||||    
T  45777279 caaaagataaaattaagtcaaactgttttcatataaactataagttg 45777233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Original strand, 46825061 - 46825095
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||||||||||||||||||| |||||||||||    
T  46825061 aaaagataaaataaagtcaaattgttttcatataa 46825095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 3635927 - 3635956
Alignment:
Q  85 caaaagataaaataaagtcaaattattttc 114  Q
    ||||||||||||||||||||||||||||||    
T  3635927 caaaagataaaataaagtcaaattattttc 3635956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 5006639 - 5006582
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||| ||||  | || |||||||||||||||||||||| | |||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataa 5006582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 7623078 - 7623135
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||| || |||||| |||||||||||| || | |||| ||||||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataa 7623135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 8445210 - 8445275
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 112  Q
    |||||||| ||||| || | |||||| ||||||| || ||||||||||||||||| ||||| ||||    
T  8445210 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 8445275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 27548187 - 27548268
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    ||||| || ||||| |||| |||||| |||||   || ||||||||||||||||||| |||| ||||||| ||| |||||||    
T  27548187 ttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataag 27548268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 27626258 - 27626197
Alignment:
Q  59 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||| ||||| | || |||||| ||||||||||||||| |||| | ||||||    
T  27626258 tgtttatgtataagctatttctatatcaaaagctaaaataaagtcaaactattattatataa 27626197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 28178910 - 28178963
Alignment:
Q  64 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 117  Q
    ||||||||| ||||| | || |||||||||||||||||||| ||| ||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 28613665 - 28613596
Alignment:
Q  62 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    ||||||||||| ||||||| || |||||||||||| ||||| ||||| ||||  |||||  |||||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagttataagttg 28613596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 29574754 - 29574689
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 105  Q
    |||||| |||||||| || || ||||||||||| ||||||| |  |||||||| ||||||||||||    
T  29574754 taagcgtttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataaagtcaa 29574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 39551695 - 39551614
Alignment:
Q  46 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||| |||| |||| ||||||| ||||| | || ||||||||| | |||||| ||| | ||||||||||| ||||||    
T  39551695 cttatcatataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataa 39551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 40428518 - 40428559
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||| |||||||||||| ||||||||||||||||| ||||||    
T  40428518 aaaaaataaaataaagttaaattattttcatataagctataa 40428559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 1373670 - 1373614
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 119  Q
    |||||| ||||||||||| |  ||||||||||| |||||||||| | ||||||||||    
T  1373670 tatgtaaaagttatttttatgacaaaagataaattaaagtcaaacttttttcatata 1373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 5269463 - 5269519
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 112  Q
    ||||| |||| ||||| |||||| | ||  |||||||||||||||||||||||||||    
T  5269463 aagtgcttatatataaattatttctttaataaaagataaaataaagtcaaattattt 5269519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 14823982 - 14823938
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  14823982 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 14823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 15270989 - 15270945
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 100  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  15270989 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 15270945  T

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Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 20476651 - 20476595
Alignment:
Q  52 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 108  Q
    |||||||||| |||| ||||||||||| | |  |||||||||||||||| |||||||    
T  20476651 atacaagtgtgtatgcataagttatttctattgcaaaagataaaataaattcaaatt 20476595  T

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Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 25507284 - 25507320
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagat 92  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25507284 aagtgtttatgtataagttatttctataccaaaagat 25507320  T

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Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 25558326 - 25558290
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagat 92  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25558326 aagtgtttatgtataagttatttctataccaaaagat 25558290  T

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Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 25558524 - 25558488
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagat 92  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25558524 aagtgtttatgtataagttatttctataccaaaagat 25558488  T

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Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 33894556 - 33894619
Alignment:
Q  56 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||| ||||||||||| ||||| | || ||||||||||||| |||||||| | |||||||||||    
T  33894556 aagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataa 33894619  T

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Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 38010659 - 38010719
Alignment:
Q  68 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||| ||||||||  | |||||||||||| |||| |||||| ||||||||||| |||||||    
T  38010659 ataaattatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataag 38010719  T

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Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 39908099 - 39908059
Alignment:
Q  88 aagataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||||||| ||| |||||||| |||||||    
T  39908099 aagataaaataaagtcaaataattatcatataagctataag 39908059  T

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Target: scaffold0590 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 1219 - 1147
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| ||||| ||||||||||| ||||| | || |||||||||||||||||||||| |||| ||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataa 1147  T

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Target: scaffold0275 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 2756 - 2828
Alignment:
Q  48 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    ||||||| ||||| ||||||||||| ||||| | || |||||||||||||||||||||| |||| ||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataa 2828  T

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Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 51508 - 51572
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||| ||||||||| | ||||||    
T  51508 tatgtataagttatttttataacaaaatataaaataaagttaaattgttttcatatcaactataa 51572  T

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Target: scaffold0549 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 1876 - 1786
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  1876 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 1786  T

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Target: scaffold0549; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 3966 - 3876
Alignment:
Q  40 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 131  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  3966 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 3876  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 69054 - 69016
Alignment:
Q  82 taccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  69054 taccaaaatataaaataaagtcaaattattttcatataa 69016  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 34104 - 34063
Alignment:
Q  86 aaaagataaaataaagtcaaattattttcatataacctataa 127  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  34104 aaaagataaaataaagtcaaattattttcatatgaactataa 34063  T

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Target: scaffold0508 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 9923 - 9848
Alignment:
Q  45 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||| | ||| ||||||||||||||||| | || ||||| ||||||| ||||||||   |||||||||||    
T  9923 gcttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataa 9848  T

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Target: scaffold0349 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 120
Target Start/End: Complemental strand, 18475 - 18440
Alignment:
Q  85 caaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||||||||||| |||||||||||    
T  18475 caaaagataaaataaagtcaaattcttttcatataa 18440  T

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Target: scaffold0287 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 10158 - 10129
Alignment:
Q  85 caaaagataaaataaagtcaaattattttc 114  Q
    ||||||||||||||||||||||||||||||    
T  10158 caaaagataaaataaagtcaaattattttc 10129  T

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Target: scaffold0221 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 20235 - 20292
Alignment:
Q  63 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 120  Q
    |||||||||||||||| | ||  |||| ||||||||| |||||||| |||||||||||    
T  20235 tatgtataagttatttctttaataaaacataaaataatgtcaaattgttttcatataa 20292  T

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Target: scaffold0153 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 6600 - 6563
Alignment:
Q  91 ataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  6600 ataaaataaagtcaaactattttcatataagctataag 6563  T

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Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 13620 - 13583
Alignment:
Q  91 ataaaataaagtcaaattattttcatataacctataag 128  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  13620 ataaaataaagtcaaactattttcatataagctataag 13583  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 63431 - 63366
Alignment:
Q  47 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 112  Q
    |||||||| ||||| || | |||||| ||||||| || ||||||||||||||||| ||||| ||||    
T  63431 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 63366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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